Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-12 14:02:11 (8264): vboxwrapper version 26210
2025-10-12 14:02:11 (8264): BOINC client version: 8.0.2
2025-10-12 14:02:12 (8264): Detected: VirtualBox VboxManage Interface (Version: 7.0.14)
2025-10-12 14:02:12 (8264): Successfully copied 'init_data.xml' to the shared directory.
2025-10-12 14:02:12 (8264): Create VM. (boinc_6487820495eddd17, slot#0)
2025-10-12 14:02:13 (8264): Setting Memory Size for VM. (4700MB)
2025-10-12 14:02:13 (8264): Setting CPU Count for VM. (7)
2025-10-12 14:02:13 (8264): Setting Chipset Options for VM.
2025-10-12 14:02:14 (8264): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-12 14:02:14 (8264): Setting Boot Options for VM.
2025-10-12 14:02:14 (8264): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-12 14:02:15 (8264): Enabling VM Network Access.
2025-10-12 14:02:15 (8264): Disabling USB Support for VM.
2025-10-12 14:02:15 (8264): Disabling COM Port Support for VM.
2025-10-12 14:02:15 (8264): Disabling LPT Port Support for VM.
2025-10-12 14:02:16 (8264): Disabling Audio Support for VM.
2025-10-12 14:02:16 (8264): Disabling Clipboard Support for VM.
2025-10-12 14:02:16 (8264): Disabling Drag and Drop Support for VM.
2025-10-12 14:02:16 (8264): Adding storage controller(s) to VM.
2025-10-12 14:02:17 (8264): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-12 14:02:19 (8264): Adding VirtualBox Guest Additions to VM.
2025-10-12 14:02:20 (8264): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-12 14:02:20 (8264): forwarding host port 50555 to guest port 80
2025-10-12 14:02:20 (8264): Enabling remote desktop for VM.
2025-10-12 14:02:21 (8264): Enabling shared directory for VM.
2025-10-12 14:02:21 (8264): Starting VM using VBoxManage interface. (boinc_6487820495eddd17, slot#0)
2025-10-12 14:02:27 (8264): Successfully started VM. (PID = '6744')
2025-10-12 14:02:27 (8264): Reporting VM Process ID to BOINC.
2025-10-12 14:02:27 (8264): Guest Log: BIOS: VirtualBox 7.0.14
2025-10-12 14:02:27 (8264): Guest Log: CPUID EDX: 0x178bfbff
2025-10-12 14:02:27 (8264): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-12 14:02:27 (8264): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-12 14:02:27 (8264): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-12 14:02:27 (8264): Detected: Web Application Enabled (http://localhost:50555)
2025-10-12 14:02:27 (8264): Detected: Remote Desktop Enabled (localhost:50564)
2025-10-12 14:02:27 (8264): Preference change detected
2025-10-12 14:02:27 (8264): Setting CPU throttle for VM. (60%)
2025-10-12 14:02:27 (8264): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-12 14:02:29 (8264): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-12 14:02:29 (8264): Guest Log: BIOS: Booting from Hard Disk...
2025-10-12 14:02:32 (8264): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-12 14:02:32 (8264): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-12 14:02:32 (8264): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-12 14:02:39 (8264): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-12 14:02:39 (8264): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-12 14:02:47 (8264): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-12 14:02:47 (8264): Guest Log: 00:00:00.000186 main     Log opened 2025-10-12T14:02:46.128596000Z
2025-10-12 14:02:47 (8264): Guest Log: 00:00:00.000317 main     OS Product: Linux
2025-10-12 14:02:47 (8264): Guest Log: 00:00:00.000351 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-12 14:02:47 (8264): Guest Log: 00:00:00.000378 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-12 14:02:47 (8264): Guest Log: 00:00:00.000405 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-12 14:02:47 (8264): Guest Log: 00:00:00.000406 main     Process ID: 1357
2025-10-12 14:02:47 (8264): Guest Log: 00:00:00.000407 main     Package type: LINUX_64BITS_GENERIC
2025-10-12 14:02:47 (8264): Guest Log: 00:00:00.001006 main     5.2.32 r132073 started. Verbose level = 0
2025-10-12 14:02:47 (8264): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-12 14:02:47 (8264): Guest Log: [INFO] Mounting shared directory
2025-10-12 14:02:47 (8264): Guest Log: [INFO] Checking for init_data.xml
2025-10-12 14:02:57 (8264): Guest Log: 00:00:10.003733 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 410 973 982 000ns (GuestNow=1 760 292 177 104 537 000 ns GuestLast=1 760 277 766 130 555 000 ns fSetTimeLastLoop=true )
2025-10-12 14:03:04 (8264): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-12 14:03:04 (8264): Guest Log: [INFO] Detected branch: prod
2025-10-12 14:03:04 (8264): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-12 14:03:04 (8264): Guest Log: Copying input files
2025-10-12 14:03:06 (8264): Guest Log: Copied input files into RunAtlas.
2025-10-12 14:03:06 (8264): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-12 14:03:06 (8264): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-12 14:03:06 (8264): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-12 14:03:06 (8264): Guest Log: Further information can be found at the LHC@home message board.
2025-10-12 14:03:44 (8264): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-12 14:03:44 (8264): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-12 14:03:44 (8264): Guest Log: 2.6.3.0 1656 0 30164 151631 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-12 14:03:45 (8264): Guest Log: copied the webapp to /var/www
2025-10-12 14:03:45 (8264): Guest Log: ATHENA_PROC_NUMBER=7
2025-10-12 14:03:45 (8264): Guest Log: ATHENA_CORE_NUMBER=7
2025-10-12 14:03:45 (8264): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-12 14:03:45 (8264): Guest Log:  *** Starting ATLAS job. (PandaID=6839928898 taskID=46676269) ***
2025-10-12 15:03:17 (8264): VM state change detected. (old = 'running', new = 'paused')
2025-10-12 15:03:37 (8264): VM state change detected. (old = 'paused', new = 'running')
2025-10-12 15:42:49 (8264): Status Report: Elapsed Time: '6000.000000'
2025-10-12 15:42:49 (8264): Status Report: CPU Time: '19101.437500'
2025-10-12 17:09:19 (8264): Guest Log:  *** Job finished ***
2025-10-12 17:09:19 (8264): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-12 17:09:19 (8264): Guest Log: 2025-10-12 21:08:45,571 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-12 17:09:19 (8264): Guest Log: 2025-10-12 21:08:45,571 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-12 17:09:19 (8264): Guest Log: 2025-10-12 21:08:54,440 | INFO     | [monitor] cgroup control has ended
2025-10-12 17:09:19 (8264): Guest Log: 2025-10-12 21:08:55,963 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140303604098880)>', '<ExcThread(monitor, started 140302413195008)>']
2025-10-12 17:09:19 (8264): Guest Log: 2025-10-12 21:08:56,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-12 17:09:19 (8264): Guest Log: 2025-10-12 21:08:56,604 | INFO     | [monitor] control thread has ended
2025-10-12 17:09:19 (8264): Guest Log: 2025-10-12 21:09:00,969 | INFO     | all workflow threads have been joined
2025-10-12 17:09:19 (8264): Guest Log: 2025-10-12 21:09:00,969 | INFO     | end of generic workflow (traces error code: 0)
2025-10-12 17:09:19 (8264): Guest Log: 2025-10-12 21:09:00,969 | INFO     | traces error code: 0
2025-10-12 17:09:19 (8264): Guest Log: 2025-10-12 21:09:00,969 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-12 17:09:19 (8264): Guest Log: 2025-10-12 21:09:01,178 [wrapper] ==== pilot stdout END ====
2025-10-12 17:09:19 (8264): Guest Log: 2025-10-12 21:09:01,183 [wrapper] ==== wrapper stdout RESUME ====
2025-10-12 17:09:19 (8264): Guest Log: 2025-10-12 21:09:01,189 [wrapper] pilotpid: 6094
2025-10-12 17:09:19 (8264): Guest Log: 2025-10-12 21:09:01,194 [wrapper] Pilot exit status: 0
2025-10-12 17:09:19 (8264): Guest Log: 2025-10-12 21:09:01,982 [wrapper] pandaids: 6839928898
2025-10-12 17:09:19 (8264): Guest Log: 2025-10-12 21:09:02,013 [wrapper] cleanup supervisor_pilot  8778 6095
2025-10-12 17:09:19 (8264): Guest Log: 2025-10-12 21:09:02,018 [wrapper] Test setup, not cleaning
2025-10-12 17:09:19 (8264): Guest Log: 2025-10-12 21:09:02,023 [wrapper] apfmon messages muted
2025-10-12 17:09:19 (8264): Guest Log: 2025-10-12 21:09:02,028 [wrapper] ==== wrapper stdout END ====
2025-10-12 17:09:19 (8264): Guest Log: 2025-10-12 21:09:02,032 [wrapper] ==== wrapper stderr END ====
2025-10-12 17:09:19 (8264): Guest Log:  *** Error codes and diagnostics ***
2025-10-12 17:09:19 (8264): Guest Log:     "exeErrorCode": 0,
2025-10-12 17:09:19 (8264): Guest Log:     "exeErrorDiag": "",
2025-10-12 17:09:19 (8264): Guest Log:     "pilotErrorCode": 0,
2025-10-12 17:09:19 (8264): Guest Log:     "pilotErrorDiag": "",
2025-10-12 17:09:19 (8264): Guest Log:  *** Listing of results directory ***
2025-10-12 17:09:19 (8264): Guest Log: total 195816
2025-10-12 17:09:19 (8264): Guest Log: -rw-r--r--. 1 atlas atlas    563267 Oct  7 07:02 pilot3.tar.gz
2025-10-12 17:09:19 (8264): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 12 12:21 runpilot2-wrapper.sh
2025-10-12 17:09:19 (8264): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 12 12:21 queuedata.json
2025-10-12 17:09:19 (8264): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 12 18:03 start_atlas.sh
2025-10-12 17:09:19 (8264): Guest Log: -rwxr-xr-x. 1 atlas atlas    576703 Oct 12 18:03 input.tar.gz
2025-10-12 17:09:19 (8264): Guest Log: -rwxr-xr-x. 1 atlas atlas      8912 Oct 12 18:03 init_data.xml
2025-10-12 17:09:19 (8264): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 12 18:03 EVNT.46676267._003760.pool.root.1 -> /data/./ATLAS.root_0
2025-10-12 17:09:19 (8264): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 12 18:03 pandaJob.out
2025-10-12 17:09:19 (8264): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 12 18:08 agis_ddmendpoints.agis.ALL.json
2025-10-12 17:09:19 (8264): Guest Log: -rw-------. 1 atlas atlas    975528 Oct 12 18:08 agis_schedconf.cvmfs.json
2025-10-12 17:09:19 (8264): Guest Log: drwx------. 4 atlas atlas      4096 Oct 12 18:08 pilot3
2025-10-12 17:09:19 (8264): Guest Log: -rw-------. 1 atlas atlas 193210258 Oct 12 21:07 HITS.46676269._078035.pool.root.1
2025-10-12 17:09:19 (8264): Guest Log: -rw-------. 1 atlas atlas      1028 Oct 12 21:08 memory_monitor_summary.json
2025-10-12 17:09:19 (8264): Guest Log: -rw-------. 1 atlas atlas        95 Oct 12 21:08 pilot_heartbeat.json
2025-10-12 17:09:19 (8264): Guest Log: -rw-------. 1 atlas atlas    379871 Oct 12 21:08 log.46676269._078035.job.log.tgz.1
2025-10-12 17:09:19 (8264): Guest Log: -rw-------. 1 atlas atlas      7801 Oct 12 21:08 heartbeat.json
2025-10-12 17:09:19 (8264): Guest Log: -rw-------. 1 atlas atlas      4805 Oct 12 21:09 pilotlog.txt
2025-10-12 17:09:19 (8264): Guest Log: -rw-------. 1 atlas atlas   1348160 Oct 12 21:09 log.46676269._078035.job.log.1
2025-10-12 17:09:19 (8264): Guest Log: -rw-------. 1 atlas atlas       357 Oct 12 21:09 output.list
2025-10-12 17:09:19 (8264): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 12 21:09 runtime_log
2025-10-12 17:09:19 (8264): Guest Log: -rw-------. 1 atlas atlas   1751040 Oct 12 21:09 result.tar.gz
2025-10-12 17:09:19 (8264): Guest Log: -rw-r--r--. 1 atlas atlas      8676 Oct 12 21:09 runtime_log.err
2025-10-12 17:09:19 (8264): Guest Log: -rw-------. 1 atlas atlas       669 Oct 12 21:09 LnmNDmzFAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6kjNDm4fwsRm.diag
2025-10-12 17:09:19 (8264): Guest Log: Looking for outputfile HITS.46676269._078035.pool.root.1
2025-10-12 17:09:19 (8264): Guest Log: HITS file was successfully produced
2025-10-12 17:09:19 (8264): Guest Log: -rw-------. 1 atlas atlas 193210258 Oct 12 21:07 /home/atlas/RunAtlas/HITS.46676269._078035.pool.root.1
2025-10-12 17:09:20 (8264): Guest Log: Successfully finished the ATLAS job!
2025-10-12 17:09:20 (8264): Guest Log: Copying the results back to the shared directory!
2025-10-12 17:09:20 (8264): Guest Log:  *** Contents of shared directory: ***
2025-10-12 17:09:20 (8264): Guest Log: total 409928
2025-10-12 17:09:20 (8264): Guest Log: -rwxrwxrwx. 1 root root 224191169 Oct 12 18:02 ATLAS.root_0
2025-10-12 17:09:20 (8264): Guest Log: -rwxrwxrwx. 1 root root 193210258 Oct 12  2025 HITS.pool.root.1
2025-10-12 17:09:20 (8264): Guest Log: -rwxrwxrwx. 1 root root      8912 Oct 12 18:02 init_data.xml
2025-10-12 17:09:20 (8264): Guest Log: -rwxrwxrwx. 1 root root    576703 Oct 12 13:47 input.tar.gz
2025-10-12 17:09:20 (8264): Guest Log: -rwxrwxrwx. 1 root root   1751040 Oct 12  2025 result.tar.gz
2025-10-12 17:09:20 (8264): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 12 13:47 start_atlas.sh
2025-10-12 17:09:20 (8264): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-12 17:09:20 (8264): VM Completion File Detected.
2025-10-12 17:09:20 (8264): Powering off VM.
2025-10-12 17:09:21 (8264): Successfully stopped VM.
2025-10-12 17:09:21 (8264): Deregistering VM. (boinc_6487820495eddd17, slot#0)
2025-10-12 17:09:21 (8264): Removing network bandwidth throttle group from VM.
2025-10-12 17:09:22 (8264): Removing VM from VirtualBox.
2025-10-12 17:09:28 (8264): called boinc_finish(0)

</stderr_txt>
]]>

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