Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:37:52 (3332748): wrapper (7.7.26015): starting
01:37:52 (3332748): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 01:37:52] Arguments: --nthreads 3
[2025-10-13 01:37:52] Threads: 3
[2025-10-13 01:37:52] Checking for CVMFS
[2025-10-13 01:37:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:37:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:37:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:37:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:37:52] 2.9.2.0 1839474 4912 85932 151641 0 57 22952486 36864001 0 130560 0 3938788 99.991 170538 933 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 01:37:52] CVMFS is ok
[2025-10-13 01:37:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:37:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:37:52] Further information can be found at the LHC@home message board.
[2025-10-13 01:37:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:37:52] Checking for apptainer binary...
[2025-10-13 01:37:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:37:52] Running /usr/bin/apptainer --version
[2025-10-13 01:37:52] apptainer version 1.4.1-1.1
[2025-10-13 01:37:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:37:52] thA371b
[2025-10-13 01:37:52] apptainer works
[2025-10-13 01:37:52] Set ATHENA_PROC_NUMBER=3
[2025-10-13 01:37:52] Set ATHENA_CORE_NUMBER=3
[2025-10-13 01:37:52] Starting ATLAS job with PandaID=6839865812
[2025-10-13 01:37:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:00:28]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:00:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:00:28] ANSI_COLOR="0;31"
[2025-10-13 03:00:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:00:28] HOME_URL="https://www.centos.org/"
[2025-10-13 03:00:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:00:28] 
[2025-10-13 03:00:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:00:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:00:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:00:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:00:28] 
[2025-10-13 03:00:28] 2025-10-13 00:59:56,402 | INFO     | ***************************************
[2025-10-13 03:00:28] 2025-10-13 00:59:56,905 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 03:00:28] 2025-10-13 00:59:56,917 | INFO     | sufficient remaining disk space (236686671872 B)
[2025-10-13 03:00:28] 2025-10-13 00:59:56,918 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:00:28] 2025-10-13 00:59:56,918 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:00:28] 2025-10-13 00:59:56,918 | INFO     | update_server=False
[2025-10-13 03:00:28] 2025-10-13 00:59:56,918 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:00:28] 2025-10-13 00:59:56,918 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:00:28] 2025-10-13 00:59:56,918 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:00:28] 2025-10-13 00:59:56,966 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:00:28] 2025-10-13 00:59:56,966 | INFO     | aborting loop
[2025-10-13 03:00:28] 2025-10-13 00:59:57,917 | INFO     | all data control threads have been joined
[2025-10-13 03:00:28] 2025-10-13 00:59:57,923 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:00:28] 2025-10-13 00:59:57,923 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:00:28] 2025-10-13 00:59:57,941 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:00:28] 2025-10-13 00:59:57,971 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:00:28] 2025-10-13 00:59:58,221 | INFO     | all payload control threads have been joined
[2025-10-13 03:00:28] 2025-10-13 00:59:58,271 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:00:28] 2025-10-13 00:59:58,344 | INFO     | all job control threads have been joined
[2025-10-13 03:00:28] 2025-10-13 00:59:58,571 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:00:28] 2025-10-13 00:59:58,708 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:00:28] 2025-10-13 00:59:58,846 | INFO     | [job] validate thread has finished
[2025-10-13 03:00:28] 2025-10-13 00:59:58,905 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:00:28] 2025-10-13 00:59:58,922 | INFO     | [data] control thread has finished
[2025-10-13 03:00:28] 2025-10-13 00:59:58,924 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:00:28] 2025-10-13 00:59:59,020 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:00:28] 2025-10-13 00:59:59,030 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:00:28] 2025-10-13 00:59:59,227 | INFO     | [payload] control thread has finished
[2025-10-13 03:00:28] 2025-10-13 00:59:59,350 | INFO     | [job] control thread has finished
[2025-10-13 03:00:28] 2025-10-13 01:00:03,036 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:00:28] 2025-10-13 01:00:03,152 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:00:28] 2025-10-13 01:00:07,852 | INFO     | job.realtimelogging is not enabled
[2025-10-13 03:00:28] 2025-10-13 01:00:08,858 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:00:28] 2025-10-13 01:00:10,232 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139689248753472)>', '<ExcThread(monitor, started 139688627132160)>']
[2025-10-13 03:00:28] 2025-10-13 01:00:15,258 | INFO     | all workflow threads have been joined
[2025-10-13 03:00:28] 2025-10-13 01:00:15,258 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:00:28] 2025-10-13 01:00:15,258 | INFO     | traces error code: 0
[2025-10-13 03:00:28] 2025-10-13 01:00:15,259 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:00:28] 2025-10-13 01:00:27,959 | INFO     | PID=3336474 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:00:28] 2025-10-13 01:00:27,959 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:00:28] 2025-10-13 01:00:27,959 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:00:28] 2025-10-13 01:00:27,959 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:00:28] 2025-10-13 01:00:27,959 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:00:28] 2025-10-13 01:00:27,959 | CRITICAL | thread 'MainThread' is not alive
[2025-10-13 03:00:28] 2025-10-13 01:00:27,959 | INFO     | [monitor] control thread has ended
[2025-10-13 03:00:28] 2025-10-13 01:00:28,009 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:00:28] 2025-10-13 01:00:28,011 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:00:28] 2025-10-13 01:00:28,013 [wrapper] pilotpid: 3336474
[2025-10-13 03:00:28] 2025-10-13 01:00:28,015 [wrapper] Pilot exit status: 0
[2025-10-13 03:00:28] 2025-10-13 01:00:28,023 [wrapper] pandaids: 6839865812
[2025-10-13 03:00:28] 2025-10-13 01:00:28,038 [wrapper] cleanup supervisor_pilot 3354720 3336475
[2025-10-13 03:00:28] 2025-10-13 01:00:28,040 [wrapper] Test setup, not cleaning
[2025-10-13 03:00:28] 2025-10-13 01:00:28,042 [wrapper] apfmon messages muted
[2025-10-13 03:00:28] 2025-10-13 01:00:28,045 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:00:28] 2025-10-13 01:00:28,047 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:00:28]  *** Error codes and diagnostics ***
[2025-10-13 03:00:28]     "exeErrorCode": 0,
[2025-10-13 03:00:28]     "exeErrorDiag": "",
[2025-10-13 03:00:28]     "pilotErrorCode": 0,
[2025-10-13 03:00:28]     "pilotErrorDiag": "",
[2025-10-13 03:00:28]  *** Listing of results directory ***
[2025-10-13 03:00:28] total 420824
[2025-10-13 03:00:28] -rw-r--r-- 1 boinc boinc    557409 Oct 12 11:51 pilot3.tar.gz
[2025-10-13 03:00:28] -rwx------ 1 boinc boinc     36292 Oct 12 11:54 runpilot2-wrapper.sh
[2025-10-13 03:00:28] -rw-r--r-- 1 boinc boinc      5112 Oct 12 11:55 queuedata.json
[2025-10-13 03:00:28] -rw-r--r-- 1 boinc boinc       100 Oct 13 01:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:00:28] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 01:37 run_atlas
[2025-10-13 03:00:28] -rw-r--r-- 1 boinc boinc       105 Oct 13 01:37 job.xml
[2025-10-13 03:00:28] -rw-r--r-- 2 boinc boinc 225151264 Oct 13 01:37 EVNT.46676267._000993.pool.root.1
[2025-10-13 03:00:28] -rw-r--r-- 2 boinc boinc    569684 Oct 13 01:37 input.tar.gz
[2025-10-13 03:00:28] -rw-r--r-- 2 boinc boinc     15120 Oct 13 01:37 start_atlas.sh
[2025-10-13 03:00:28] drwxrwx--x 2 boinc boinc      4096 Oct 13 01:37 shared
[2025-10-13 03:00:28] -rw-r--r-- 1 boinc boinc         0 Oct 13 01:37 boinc_setup_complete
[2025-10-13 03:00:28] -rw-r--r-- 1 boinc boinc      6440 Oct 13 01:37 init_data.xml
[2025-10-13 03:00:28] -rw-r--r-- 1 boinc boinc         0 Oct 13 01:37 boinc_lockfile
[2025-10-13 03:00:28] -rw-r--r-- 1 boinc boinc      2549 Oct 13 01:37 pandaJob.out
[2025-10-13 03:00:28] -rw------- 1 boinc boinc    975603 Oct 13 01:37 agis_schedconf.cvmfs.json
[2025-10-13 03:00:28] -rw------- 1 boinc boinc   1560580 Oct 13 01:37 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:00:28] drwx------ 5 boinc boinc      4096 Oct 13 01:37 pilot3
[2025-10-13 03:00:28] -rw------- 1 boinc boinc 199912504 Oct 13 02:59 HITS.46676269._075547.pool.root.1
[2025-10-13 03:00:28] -rw-r--r-- 1 boinc boinc       529 Oct 13 02:59 boinc_task_state.xml
[2025-10-13 03:00:28] -rw------- 1 boinc boinc      1020 Oct 13 02:59 memory_monitor_summary.json
[2025-10-13 03:00:28] -rw------- 1 boinc boinc    263257 Oct 13 02:59 log.46676269._075547.job.log.tgz.1
[2025-10-13 03:00:28] -rw------- 1 boinc boinc      7764 Oct 13 02:59 heartbeat.json
[2025-10-13 03:00:28] -rw-r--r-- 1 boinc boinc      8192 Oct 13 03:00 boinc_mmap_file
[2025-10-13 03:00:28] -rw-r--r-- 1 boinc boinc        27 Oct 13 03:00 wrapper_checkpoint.txt
[2025-10-13 03:00:28] -rw------- 1 boinc boinc       817 Oct 13 03:00 pilotlog.txt
[2025-10-13 03:00:28] -rw------- 1 boinc boinc        95 Oct 13 03:00 pilot_heartbeat.json
[2025-10-13 03:00:28] -rw------- 1 boinc boinc    722795 Oct 13 03:00 log.46676269._075547.job.log.1
[2025-10-13 03:00:28] -rw------- 1 boinc boinc       357 Oct 13 03:00 output.list
[2025-10-13 03:00:28] -rw-r--r-- 1 boinc boinc       620 Oct 13 03:00 runtime_log
[2025-10-13 03:00:28] -rw------- 1 boinc boinc   1003520 Oct 13 03:00 result.tar.gz
[2025-10-13 03:00:28] -rw------- 1 boinc boinc       659 Oct 13 03:00 wh0NDmCy7R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmxaTMDmmULhNn.diag
[2025-10-13 03:00:28] -rw-r--r-- 1 boinc boinc      8782 Oct 13 03:00 runtime_log.err
[2025-10-13 03:00:28] -rw-r--r-- 1 boinc boinc      8695 Oct 13 03:00 stderr.txt
[2025-10-13 03:00:28] HITS file was successfully produced:
[2025-10-13 03:00:28] -rw------- 1 boinc boinc 199912504 Oct 13 02:59 shared/HITS.pool.root.1
[2025-10-13 03:00:28]  *** Contents of shared directory: ***
[2025-10-13 03:00:28] total 416668
[2025-10-13 03:00:28] -rw-r--r-- 2 boinc boinc 225151264 Oct 13 01:37 ATLAS.root_0
[2025-10-13 03:00:28] -rw-r--r-- 2 boinc boinc    569684 Oct 13 01:37 input.tar.gz
[2025-10-13 03:00:28] -rw-r--r-- 2 boinc boinc     15120 Oct 13 01:37 start_atlas.sh
[2025-10-13 03:00:28] -rw------- 1 boinc boinc 199912504 Oct 13 02:59 HITS.pool.root.1
[2025-10-13 03:00:28] -rw------- 1 boinc boinc   1003520 Oct 13 03:00 result.tar.gz
03:00:29 (3332748): run_atlas exited; CPU time 14095.619110
03:00:29 (3332748): called boinc_finish(0)

</stderr_txt>
]]>

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