Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:30:49 (1074903): wrapper (7.7.26015): starting
11:30:49 (1074903): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 11:30:49] Arguments: --nthreads 9
[2025-10-12 11:30:49] Threads: 9
[2025-10-12 11:30:49] Checking for CVMFS
[2025-10-12 11:30:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:30:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:30:50] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:30:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:30:52] 2.13.2.0 1094862 129443 829124 151625 3 319 29477797 32935937 62275 16776704 73 401275710 99.729 279616474 19949 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 11:30:52] CVMFS is ok
[2025-10-12 11:30:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:30:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 11:30:52] Further information can be found at the LHC@home message board.
[2025-10-12 11:30:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:30:52] Checking for apptainer binary...
[2025-10-12 11:30:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:30:52] Running /usr/bin/apptainer --version
[2025-10-12 11:30:52] apptainer version 1.4.3-1.el9
[2025-10-12 11:30:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:30:53] lc-12-33.aglt2.org
[2025-10-12 11:30:53] apptainer works
[2025-10-12 11:30:53] Set ATHENA_PROC_NUMBER=9
[2025-10-12 11:30:53] Set ATHENA_CORE_NUMBER=9
[2025-10-12 11:30:53] Starting ATLAS job with PandaID=6839387595
[2025-10-12 11:30:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:48:33]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:48:33] 2025-10-12 18:47:41,180 | INFO     | monitor loop #653: job 0:6839387595 is in state 'finished'
[2025-10-12 14:48:33] 2025-10-12 18:47:41,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:48:33] 2025-10-12 18:47:42,849 | INFO     | time since job start (11736s) is within the limit (172800.0s)
[2025-10-12 14:48:33] 2025-10-12 18:47:43,652 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 14:48:33] 2025-10-12 18:47:43,657 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2861.5128229166653
[2025-10-12 14:48:33] 2025-10-12 18:47:43,672 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6839387595/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:48:33] 2025-10-12 18:47:43,672 | INFO     | extracted standard info from prmon json
[2025-10-12 14:48:33] 2025-10-12 18:47:43,672 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 14:48:33] 2025-10-12 18:47:43,672 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:48:33] 2025-10-12 18:47:43,673 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:48:33] 2025-10-12 18:47:43,673 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:48:33] 2025-10-12 18:47:43,676 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:48:33] 2025-10-12 18:47:43,676 | INFO     | sum of square deviations: 2126679240.2157934
[2025-10-12 14:48:33] 2025-10-12 18:47:43,677 | INFO     | sum of deviations: -34948754312.5842
[2025-10-12 14:48:33] 2025-10-12 18:47:43,678 | INFO     | mean x: 1760289027.7210526
[2025-10-12 14:48:33] 2025-10-12 18:47:43,678 | INFO     | mean y: 2207465.1210526316
[2025-10-12 14:48:33] 2025-10-12 18:47:43,678 | INFO     | -- intersect: 28929893213.686676
[2025-10-12 14:48:33] 2025-10-12 18:47:43,678 | INFO     | intersect: 28929893213.686676
[2025-10-12 14:48:33] 2025-10-12 18:47:43,678 | INFO     | chi2: 4.101137628129117
[2025-10-12 14:48:33] 2025-10-12 18:47:43,678 | INFO     | sum of square deviations: 1963151689.9135196
[2025-10-12 14:48:33] 2025-10-12 18:47:43,680 | INFO     | sum of deviations: -19889497323.96757
[2025-10-12 14:48:33] 2025-10-12 18:47:43,680 | INFO     | mean x: 1760288875.2216215
[2025-10-12 14:48:33] 2025-10-12 18:47:43,680 | INFO     | mean y: 2221292.291891892
[2025-10-12 14:48:33] 2025-10-12 18:47:43,680 | INFO     | -- intersect: 17836431991.859707
[2025-10-12 14:48:33] 2025-10-12 18:47:43,680 | INFO     | intersect: 17836431991.859707
[2025-10-12 14:48:33] 2025-10-12 18:47:43,680 | INFO     | chi2: 3.347582875657566
[2025-10-12 14:48:33] 2025-10-12 18:47:43,680 | INFO     | current chi2=3.347582875657566 (change=18.37428588845755 %)
[2025-10-12 14:48:33] 2025-10-12 18:47:43,680 | INFO     | right removable region: 184
[2025-10-12 14:48:33] 2025-10-12 18:47:43,681 | INFO     | sum of square deviations: 1963137782.464867
[2025-10-12 14:48:33] 2025-10-12 18:47:43,681 | INFO     | sum of deviations: -74119947529.23782
[2025-10-12 14:48:33] 2025-10-12 18:47:43,682 | INFO     | mean x: 1760289180.227027
[2025-10-12 14:48:33] 2025-10-12 18:47:43,682 | INFO     | mean y: 2243784.7675675675
[2025-10-12 14:48:33] 2025-10-12 18:47:43,682 | INFO     | -- intersect: 66463468687.12476
[2025-10-12 14:48:33] 2025-10-12 18:47:43,682 | INFO     | intersect: 66463468687.12476
[2025-10-12 14:48:33] 2025-10-12 18:47:43,682 | INFO     | chi2: 1.6233934101848884
[2025-10-12 14:48:33] 2025-10-12 18:47:43,682 | INFO     | current chi2=1.6233934101848884 (change=60.41602215321269 %)
[2025-10-12 14:48:33] 2025-10-12 18:47:43,682 | INFO     | sum of square deviations: 1808212177.6611195
[2025-10-12 14:48:33] 2025-10-12 18:47:43,683 | INFO     | sum of deviations: -84433715951.05553
[2025-10-12 14:48:33] 2025-10-12 18:47:43,683 | INFO     | mean x: 1760289332.7277777
[2025-10-12 14:48:33] 2025-10-12 18:47:43,683 | INFO     | mean y: 2253869.611111111
[2025-10-12 14:48:33] 2025-10-12 18:47:43,683 | INFO     | -- intersect: 82198232498.32317
[2025-10-12 14:48:33] 2025-10-12 18:47:43,684 | INFO     | intersect: 82198232498.32317
[2025-10-12 14:48:33] 2025-10-12 18:47:43,684 | INFO     | chi2: 1.312605892210399
[2025-10-12 14:48:33] 2025-10-12 18:47:43,684 | INFO     | current chi2=1.312605892210399 (change=19.144313142129477 %)
[2025-10-12 14:48:33] 2025-10-12 18:47:43,684 | INFO     | left removable region: 20
[2025-10-12 14:48:33] 2025-10-12 18:47:43,684 | INFO     | sum of square deviations: 1367561473.7256165
[2025-10-12 14:48:33] 2025-10-12 18:47:43,685 | INFO     | sum of deviations: -56236670376.48173
[2025-10-12 14:48:33] 2025-10-12 18:47:43,685 | INFO     | mean x: 1760289454.737805
[2025-10-12 14:48:33] 2025-10-12 18:47:43,685 | INFO     | mean y: 2255792.3841463416
[2025-10-12 14:48:33] 2025-10-12 18:47:43,685 | INFO     | -- intersect: 72388630909.84253
[2025-10-12 14:48:33] 2025-10-12 18:47:43,685 | INFO     | intersect: 72388630909.84253
[2025-10-12 14:48:33] 2025-10-12 18:47:43,686 | INFO     | chi2: 0.4772351053390337
[2025-10-12 14:48:33] 2025-10-12 18:47:43,686 | INFO     | -- intersect: 72388630909.84253
[2025-10-12 14:48:33] 2025-10-12 18:47:43,686 | INFO     | current memory leak: -41.12 B/s (using 164 data points, chi2=0.48)
[2025-10-12 14:48:33] 2025-10-12 18:47:43,686 | INFO     | could have reported an average CPU frequency of 2864 MHz (10 samples)
[2025-10-12 14:48:33] 2025-10-12 18:47:43,686 | INFO     | ..............................
[2025-10-12 14:48:33] 2025-10-12 18:47:43,686 | INFO     | . Timing measurements:
[2025-10-12 14:48:33] 2025-10-12 18:47:43,687 | INFO     | . get job = 0 s
[2025-10-12 14:48:33] 2025-10-12 18:47:43,688 | INFO     | . initial setup = 6 s
[2025-10-12 14:48:33] 2025-10-12 18:47:43,688 | INFO     | . payload setup = 38 s
[2025-10-12 14:48:33] 2025-10-12 18:47:43,688 | INFO     | . stage-in = 0 s
[2025-10-12 14:48:33] 2025-10-12 18:47:43,688 | INFO     | . payload execution = 11582 s
[2025-10-12 14:48:33] 2025-10-12 18:47:43,688 | INFO     | . stage-out = 4 s
[2025-10-12 14:48:33] 2025-10-12 18:47:43,693 | INFO     | . log creation = 0 s
[2025-10-12 14:48:33] 2025-10-12 18:47:43,693 | INFO     | ..............................
[2025-10-12 14:48:33] 2025-10-12 18:47:44,141 | INFO     | 
[2025-10-12 14:48:33] 2025-10-12 18:47:44,142 | INFO     | job summary report
[2025-10-12 14:48:33] 2025-10-12 18:47:44,142 | INFO     | --------------------------------------------------
[2025-10-12 14:48:33] 2025-10-12 18:47:44,142 | INFO     | PanDA job id: 6839387595
[2025-10-12 14:48:33] 2025-10-12 18:47:44,142 | INFO     | task id: 46676269
[2025-10-12 14:48:33] 2025-10-12 18:47:44,142 | INFO     | errors: (none)
[2025-10-12 14:48:33] 2025-10-12 18:47:44,142 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:48:33] 2025-10-12 18:47:44,142 | INFO     | pilot state: finished 
[2025-10-12 14:48:33] 2025-10-12 18:47:44,142 | INFO     | transexitcode: 0
[2025-10-12 14:48:33] 2025-10-12 18:47:44,142 | INFO     | exeerrorcode: 0
[2025-10-12 14:48:33] 2025-10-12 18:47:44,142 | INFO     | exeerrordiag: 
[2025-10-12 14:48:33] 2025-10-12 18:47:44,142 | INFO     | exitcode: 0
[2025-10-12 14:48:33] 2025-10-12 18:47:44,142 | INFO     | exitmsg: OK
[2025-10-12 14:48:33] 2025-10-12 18:47:44,142 | INFO     | cpuconsumptiontime: 42195 s
[2025-10-12 14:48:33] 2025-10-12 18:47:44,143 | INFO     | nevents: 400
[2025-10-12 14:48:33] 2025-10-12 18:47:44,143 | INFO     | neventsw: 0
[2025-10-12 14:48:33] 2025-10-12 18:47:44,143 | INFO     | pid: 1098794
[2025-10-12 14:48:33] 2025-10-12 18:47:44,143 | INFO     | pgrp: 1098794
[2025-10-12 14:48:33] 2025-10-12 18:47:44,143 | INFO     | corecount: 9
[2025-10-12 14:48:33] 2025-10-12 18:47:44,143 | INFO     | event service: False
[2025-10-12 14:48:33] 2025-10-12 18:47:44,143 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348714, 3: 2348770, 4: 2348941, 5: 2348969, 16: 2349153, 27: 2349181, 35: 2349471, 38: 2349499, 11629: 2379039, 11635: 2388037,
[2025-10-12 14:48:33] 2025-10-12 18:47:44,143 | INFO     | --------------------------------------------------
[2025-10-12 14:48:33] 2025-10-12 18:47:44,143 | INFO     | 
[2025-10-12 14:48:33] 2025-10-12 18:47:44,143 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 14:48:33] 2025-10-12 18:47:44,346 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:48:33] 2025-10-12 18:47:44,346 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:48:33] 2025-10-12 18:47:44,346 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:48:33] 2025-10-12 18:47:44,346 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:48:33] 2025-10-12 18:47:44,346 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:48:33] 2025-10-12 18:47:44,346 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:48:33] 2025-10-12 18:47:44,346 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:48:33] 2025-10-12 18:47:44,346 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:48:33] 2025-10-12 18:47:44,346 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:48:33] 2025-10-12 18:47:44,346 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:48:33] 2025-10-12 18:47:44,346 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:48:33] 2025-10-12 18:47:44,347 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:48:33] 2025-10-12 18:47:44,347 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:48:33] 2025-10-12 18:47:44,347 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:48:33] 2025-10-12 18:47:44,347 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:48:33] 2025-10-12 18:47:44,347 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:48:33] 2025-10-12 18:47:44,347 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:48:33] 2025-10-12 18:47:44,347 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:48:33] 2025-10-12 18:47:44,347 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:48:33] 2025-10-12 18:47:44,347 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:48:33] 2025-10-12 18:47:44,347 | INFO     | job 6839387595 has completed (purged errors)
[2025-10-12 14:48:33] 2025-10-12 18:47:44,347 | INFO     | overall cleanup function is called
[2025-10-12 14:48:33] 2025-10-12 18:47:45,370 | INFO     | --- collectZombieJob: --- 10, [1098794]
[2025-10-12 14:48:33] 2025-10-12 18:47:45,371 | INFO     | zombie collector waiting for pid 1098794
[2025-10-12 14:48:33] 2025-10-12 18:47:45,371 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:48:33] 2025-10-12 18:47:45,371 | INFO     | collected zombie processes
[2025-10-12 14:48:33] 2025-10-12 18:47:45,371 | INFO     | will attempt to kill all subprocesses of pid=1098794
[2025-10-12 14:48:33] 2025-10-12 18:47:47,636 | INFO     | process IDs to be killed: [1098794] (in reverse order)
[2025-10-12 14:48:33] 2025-10-12 18:47:48,488 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:48:33] 2025-10-12 18:47:48,489 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:48:33] 2025-10-12 18:47:48,633 | INFO     | did not find any defunct processes belonging to 1098794
[2025-10-12 14:48:33] 2025-10-12 18:47:48,708 | INFO     | did not find any defunct processes belonging to 1098794
[2025-10-12 14:48:33] 2025-10-12 18:47:48,708 | INFO     | ready for new job
[2025-10-12 14:48:33] 2025-10-12 18:47:48,708 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:48:33] 2025-10-12 18:47:48,715 | INFO     | ***************************************
[2025-10-12 14:48:33] 2025-10-12 18:47:48,715 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:48:33] 2025-10-12 18:47:48,715 | INFO     | ***************************************
[2025-10-12 14:48:33] 2025-10-12 18:47:48,715 | INFO     | 
[2025-10-12 14:48:33] 2025-10-12 18:47:48,737 | INFO     | architecture information:
[2025-10-12 14:48:33] 2025-10-12 18:47:48,746 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:48:33] 2025-10-12 18:47:48,809 | INFO     | cat /etc/os-release:
[2025-10-12 14:48:33] NAME="CentOS Linux"
[2025-10-12 14:48:33] VERSION="7 (Core)"
[2025-10-12 14:48:33] ID="centos"
[2025-10-12 14:48:33] ID_LIKE="rhel fedora"
[2025-10-12 14:48:33] VERSION_ID="7"
[2025-10-12 14:48:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:48:33] ANSI_COLOR="0;31"
[2025-10-12 14:48:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:48:33] HOME_URL="https://www.centos.org/"
[2025-10-12 14:48:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:48:33] 
[2025-10-12 14:48:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:48:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:48:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:48:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:48:33] 
[2025-10-12 14:48:33] 2025-10-12 18:47:48,809 | INFO     | ***************************************
[2025-10-12 14:48:33] 2025-10-12 18:47:49,313 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 14:48:33] 2025-10-12 18:47:49,405 | INFO     | sufficient remaining disk space (73904685056 B)
[2025-10-12 14:48:33] 2025-10-12 18:47:49,406 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:48:33] 2025-10-12 18:47:49,406 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:48:33] 2025-10-12 18:47:49,406 | INFO     | update_server=False
[2025-10-12 14:48:33] 2025-10-12 18:47:49,406 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:48:33] 2025-10-12 18:47:49,406 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:48:33] 2025-10-12 18:47:49,451 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:48:33] 2025-10-12 18:47:49,744 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:48:33] 2025-10-12 18:47:49,747 | INFO     | aborting loop
[2025-10-12 14:48:33] 2025-10-12 18:47:49,887 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:48:33] 2025-10-12 18:47:50,039 | INFO     | all payload control threads have been joined
[2025-10-12 14:48:33] 2025-10-12 18:47:50,132 | INFO     | all job control threads have been joined
[2025-10-12 14:48:33] 2025-10-12 18:47:50,412 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:48:33] 2025-10-12 18:47:50,412 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:48:33] 2025-10-12 18:47:50,452 | INFO     | all data control threads have been joined
[2025-10-12 14:48:33] 2025-10-12 18:47:50,573 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:48:33] 2025-10-12 18:47:50,636 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:48:33] 2025-10-12 18:47:50,636 | INFO     | [job] validate thread has finished
[2025-10-12 14:48:33] 2025-10-12 18:47:50,666 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:48:33] 2025-10-12 18:47:50,753 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:48:33] 2025-10-12 18:47:50,778 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:48:33] 2025-10-12 18:47:50,782 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:48:33] 2025-10-12 18:47:51,046 | INFO     | [payload] control thread has finished
[2025-10-12 14:48:33] 2025-10-12 18:47:51,154 | INFO     | [job] control thread has finished
[2025-10-12 14:48:33] 2025-10-12 18:47:51,458 | INFO     | [data] control thread has finished
[2025-10-12 14:48:33] 2025-10-12 18:47:51,807 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:48:33] 2025-10-12 18:47:51,872 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:48:33] 2025-10-12 18:47:51,895 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:48:33] 2025-10-12 18:47:53,474 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:48:33] 2025-10-12 18:48:17,088 | INFO     | PID=1084835 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:48:33] 2025-10-12 18:48:17,089 | INFO     | .. there are 93 such processes running
[2025-10-12 14:48:33] 2025-10-12 18:48:17,090 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:48:33] 2025-10-12 18:48:17,090 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:48:33] 2025-10-12 18:48:17,090 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:48:33] 2025-10-12 18:48:26,074 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:48:33] 2025-10-12 18:48:26,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139926706730816)>', '<ExcThread(monitor, started 139926425274112)>']
[2025-10-12 14:48:33] 2025-10-12 18:48:27,195 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:48:33] 2025-10-12 18:48:27,196 | INFO     | [monitor] control thread has ended
[2025-10-12 14:48:33] 2025-10-12 18:48:31,457 | INFO     | all workflow threads have been joined
[2025-10-12 14:48:33] 2025-10-12 18:48:31,458 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:48:33] 2025-10-12 18:48:31,458 | INFO     | traces error code: 0
[2025-10-12 14:48:33] 2025-10-12 18:48:31,458 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:48:33] 2025-10-12 18:48:32,416 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:48:33] 2025-10-12 18:48:32,467 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:48:33] 2025-10-12 18:48:32,496 [wrapper] pilotpid: 1084835
[2025-10-12 14:48:33] 2025-10-12 18:48:32,533 [wrapper] Pilot exit status: 0
[2025-10-12 14:48:33] 2025-10-12 18:48:32,627 [wrapper] pandaids: 6839387595
[2025-10-12 14:48:33] 2025-10-12 18:48:33,366 [wrapper] cleanup supervisor_pilot 2293723 1084836
[2025-10-12 14:48:33] 2025-10-12 18:48:33,387 [wrapper] Test setup, not cleaning
[2025-10-12 14:48:33] 2025-10-12 18:48:33,401 [wrapper] apfmon messages muted
[2025-10-12 14:48:33] 2025-10-12 18:48:33,427 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:48:33] 2025-10-12 18:48:33,439 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:48:33]  *** Error codes and diagnostics ***
[2025-10-12 14:48:33]     "exeErrorCode": 0,
[2025-10-12 14:48:33]     "exeErrorDiag": "",
[2025-10-12 14:48:33]     "pilotErrorCode": 0,
[2025-10-12 14:48:33]     "pilotErrorDiag": "",
[2025-10-12 14:48:33]  *** Listing of results directory ***
[2025-10-12 14:48:33] total 419148
[2025-10-12 14:48:33] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 00:38 pilot3.tar.gz
[2025-10-12 14:48:33] -rwx------. 1 boincer umatlas     36292 Oct 12 00:58 runpilot2-wrapper.sh
[2025-10-12 14:48:33] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 00:58 queuedata.json
[2025-10-12 14:48:33] -rw-r--r--. 1 boincer umatlas       100 Oct 12 11:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:48:33] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 11:30 run_atlas
[2025-10-12 14:48:33] -rw-r--r--. 1 boincer umatlas       105 Oct 12 11:30 job.xml
[2025-10-12 14:48:33] -rw-r--r--. 2 boincer umatlas 224014903 Oct 12 11:30 EVNT.46676267._004307.pool.root.1
[2025-10-12 14:48:33] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 11:30 input.tar.gz
[2025-10-12 14:48:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 11:30 start_atlas.sh
[2025-10-12 14:48:33] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 11:30 shared
[2025-10-12 14:48:33] -rw-r--r--. 1 boincer umatlas         0 Oct 12 11:30 boinc_lockfile
[2025-10-12 14:48:33] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 11:30 pandaJob.out
[2025-10-12 14:48:33] -rw-------. 1 boincer umatlas    975528 Oct 12 11:32 agis_schedconf.cvmfs.json
[2025-10-12 14:48:33] drwx------. 5 boincer umatlas      4096 Oct 12 11:32 pilot3
[2025-10-12 14:48:33] -rw-------. 1 boincer umatlas 197680154 Oct 12 14:46 HITS.46676269._071486.pool.root.1
[2025-10-12 14:48:33] -rw-r--r--. 1 boincer umatlas       530 Oct 12 14:46 boinc_task_state.xml
[2025-10-12 14:48:33] -rw-------. 1 boincer umatlas      1044 Oct 12 14:46 memory_monitor_summary.json
[2025-10-12 14:48:33] -rw-------. 1 boincer umatlas   1560580 Oct 12 14:47 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:48:33] -rw-------. 1 boincer umatlas    424342 Oct 12 14:47 log.46676269._071486.job.log.tgz.1
[2025-10-12 14:48:33] -rw-------. 1 boincer umatlas      7834 Oct 12 14:47 heartbeat.json
[2025-10-12 14:48:33] -rw-r--r--. 1 boincer umatlas      6878 Oct 12 14:48 init_data.xml
[2025-10-12 14:48:33] -rw-------. 1 boincer umatlas        95 Oct 12 14:48 pilot_heartbeat.json
[2025-10-12 14:48:33] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 14:48 boinc_mmap_file
[2025-10-12 14:48:33] -rw-r--r--. 1 boincer umatlas        28 Oct 12 14:48 wrapper_checkpoint.txt
[2025-10-12 14:48:33] -rw-------. 1 boincer umatlas      4824 Oct 12 14:48 pilotlog.txt
[2025-10-12 14:48:33] -rw-------. 1 boincer umatlas   1383163 Oct 12 14:48 log.46676269._071486.job.log.1
[2025-10-12 14:48:33] -rw-------. 1 boincer umatlas       357 Oct 12 14:48 output.list
[2025-10-12 14:48:33] -rw-r--r--. 1 boincer umatlas       620 Oct 12 14:48 runtime_log
[2025-10-12 14:48:33] -rw-------. 1 boincer umatlas   1822720 Oct 12 14:48 result.tar.gz
[2025-10-12 14:48:33] -rw-------. 1 boincer umatlas       655 Oct 12 14:48 TV1NDmyK3R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdfiNDmaHu2Tn.diag
[2025-10-12 14:48:33] -rw-r--r--. 1 boincer umatlas      8704 Oct 12 14:48 runtime_log.err
[2025-10-12 14:48:33] -rw-r--r--. 1 boincer umatlas     21250 Oct 12 14:48 stderr.txt
[2025-10-12 14:48:34] HITS file was successfully produced:
[2025-10-12 14:48:34] -rw-------. 1 boincer umatlas 197680154 Oct 12 14:46 shared/HITS.pool.root.1
[2025-10-12 14:48:34]  *** Contents of shared directory: ***
[2025-10-12 14:48:34] total 414176
[2025-10-12 14:48:34] -rw-r--r--. 2 boincer umatlas 224014903 Oct 12 11:30 ATLAS.root_0
[2025-10-12 14:48:34] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 11:30 input.tar.gz
[2025-10-12 14:48:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 11:30 start_atlas.sh
[2025-10-12 14:48:34] -rw-------. 1 boincer umatlas 197680154 Oct 12 14:46 HITS.pool.root.1
[2025-10-12 14:48:34] -rw-------. 1 boincer umatlas   1822720 Oct 12 14:48 result.tar.gz
14:48:35 (1074903): run_atlas exited; CPU time 42933.154900
14:48:35 (1074903): called boinc_finish(0)

</stderr_txt>
]]>

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