Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
17:36:57 (29659): wrapper (7.7.26015): starting
17:36:57 (29659): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 17:36:57] Arguments: --nthreads 8
[2025-10-12 17:36:57] Threads: 8
[2025-10-12 17:36:57] Checking for CVMFS
[2025-10-12 17:36:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:36:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:36:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:36:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:36:57] 2.11.0.0 4079 668 53452 151625 3 11 1787244 4096000 5502 130560 0 338679 98.055 692752 1025 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-10-12 17:36:57] CVMFS is ok
[2025-10-12 17:36:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:36:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:36:57] Further information can be found at the LHC@home message board.
[2025-10-12 17:36:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:36:57] Checking for apptainer binary...
[2025-10-12 17:36:57] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-10-12 17:36:57] apptainer is not installed, using version from CVMFS
[2025-10-12 17:36:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:36:57] WARNING: Environment variable TMPDIR already has value [/tmp/job_10514907/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node166
[2025-10-12 17:36:57] apptainer works
[2025-10-12 17:36:57] Set ATHENA_PROC_NUMBER=8
[2025-10-12 17:36:57] Set ATHENA_CORE_NUMBER=8
[2025-10-12 17:36:57] Starting ATLAS job with PandaID=6829229592
[2025-10-12 17:36:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10514907/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:35:14]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:35:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-10-12 18:35:14]  is_altstaged=None
[2025-10-12 18:35:14]  is_tar=False
[2025-10-12 18:35:14]  lfn=log.46376905._052698.job.log.tgz.1
[2025-10-12 18:35:14]  mtime=0
[2025-10-12 18:35:14]  protocol_id=None
[2025-10-12 18:35:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 18:35:14]  replicas=None
[2025-10-12 18:35:14]  scope=mc23_13p6TeV
[2025-10-12 18:35:14]  status=None
[2025-10-12 18:35:14]  status_code=0
[2025-10-12 18:35:14]  storage_token=
[2025-10-12 18:35:14]  surl=/tmp/job_10514907/atlas/pilot/slots/0/PanDA_Pilot-6829229592/log.46376905._052698.job.log.tgz.1
[2025-10-12 18:35:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5d/e5/log.46376905._052698.job.log.tgz.1
[2025-10-12 18:35:14]  workdir=None
[2025-10-12 18:35:14] ]
[2025-10-12 18:35:14] 2025-10-12 16:34:05,966 | INFO     | transferring file log.46376905._052698.job.log.tgz.1 from /tmp/job_10514907/atlas/pilot/slots/0/PanDA_Pilot-6829229592/log.46376905._052698.job.log.tgz.1 to /tmp/j
[2025-10-12 18:35:14] 2025-10-12 16:34:05,966 | INFO     | executing command: /usr/bin/env mv /tmp/job_10514907/atlas/pilot/slots/0/PanDA_Pilot-6829229592/log.46376905._052698.job.log.tgz.1 /tmp/job_10514907/atlas/pilot/sl
[2025-10-12 18:35:14] 2025-10-12 16:34:05,975 | INFO     | adding to output.list: log.46376905._052698.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5d/e5/log.46376905._052698.job.log.tg
[2025-10-12 18:35:14] 2025-10-12 16:34:05,975 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 18:35:14] 2025-10-12 16:34:05,975 | INFO     | summary of transferred files:
[2025-10-12 18:35:14] 2025-10-12 16:34:05,975 | INFO     |  -- lfn=log.46376905._052698.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 18:35:14] 2025-10-12 16:34:05,976 | INFO     | stage-out finished correctly
[2025-10-12 18:35:14] 2025-10-12 16:34:07,131 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 18:35:14] 2025-10-12 16:34:07,198 | INFO     | job 6829229592 has state=finished
[2025-10-12 18:35:14] 2025-10-12 16:34:07,198 | INFO     | preparing for final server update for job 6829229592 in state='finished'
[2025-10-12 18:35:14] 2025-10-12 16:34:07,198 | INFO     | this job has now completed (state=finished)
[2025-10-12 18:35:14] 2025-10-12 16:34:07,199 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 18:35:14] 2025-10-12 16:34:07,199 | INFO     | log transfer has been attempted: DONE
[2025-10-12 18:35:14] 2025-10-12 16:34:07,199 | INFO     | job 6829229592 has finished - writing final server update
[2025-10-12 18:35:14] 2025-10-12 16:34:07,199 | INFO     | total number of processed events: 400 (read)
[2025-10-12 18:35:14] 2025-10-12 16:34:07,199 | INFO     | executing command: lscpu
[2025-10-12 18:35:14] 2025-10-12 16:34:07,234 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 18:35:14] 2025-10-12 16:34:07,251 | INFO     | monitor loop #255: job 0:6829229592 is in state 'finished'
[2025-10-12 18:35:14] 2025-10-12 16:34:07,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 18:35:14] 2025-10-12 16:34:07,401 | INFO     | time since job start (3424s) is within the limit (172800.0s)
[2025-10-12 18:35:14] 2025-10-12 16:34:09,296 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 18:35:14] 2025-10-12 16:34:09,313 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2349.513234375
[2025-10-12 18:35:14] 2025-10-12 16:34:09,321 | INFO     | using path: /tmp/job_10514907/atlas/pilot/slots/0/PanDA_Pilot-6829229592/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 18:35:14] 2025-10-12 16:34:09,321 | INFO     | extracted standard info from prmon json
[2025-10-12 18:35:14] 2025-10-12 16:34:09,321 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 18:35:14] 2025-10-12 16:34:09,321 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 18:35:14] 2025-10-12 16:34:09,322 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:35:14] 2025-10-12 16:34:09,322 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:35:14] 2025-10-12 16:34:09,323 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:35:14] 2025-10-12 16:34:09,323 | INFO     | sum of square deviations: 36465800.0
[2025-10-12 18:35:14] 2025-10-12 16:34:09,323 | INFO     | sum of deviations: 1642544498.9999993
[2025-10-12 18:35:14] 2025-10-12 16:34:09,323 | INFO     | mean x: 1760285212.0
[2025-10-12 18:35:14] 2025-10-12 16:34:09,323 | INFO     | mean y: 2956697.0204081633
[2025-10-12 18:35:14] 2025-10-12 16:34:09,323 | INFO     | -- intersect: -79286316859.06908
[2025-10-12 18:35:14] 2025-10-12 16:34:09,323 | INFO     | intersect: -79286316859.06908
[2025-10-12 18:35:14] 2025-10-12 16:34:09,323 | INFO     | chi2: 0.0031428242988908173
[2025-10-12 18:35:14] 2025-10-12 16:34:09,323 | INFO     | -- intersect: -79286316859.06908
[2025-10-12 18:35:14] 2025-10-12 16:34:09,323 | INFO     | current memory leak: 45.04 B/s (using 49 data points, chi2=0.00)
[2025-10-12 18:35:14] 2025-10-12 16:34:09,324 | INFO     | could have reported an average CPU frequency of 2349 MHz (5 samples)
[2025-10-12 18:35:14] 2025-10-12 16:34:09,324 | INFO     | ..............................
[2025-10-12 18:35:14] 2025-10-12 16:34:09,324 | INFO     | . Timing measurements:
[2025-10-12 18:35:14] 2025-10-12 16:34:09,324 | INFO     | . get job = 0 s
[2025-10-12 18:35:14] 2025-10-12 16:34:09,324 | INFO     | . initial setup = 1 s
[2025-10-12 18:35:14] 2025-10-12 16:34:09,324 | INFO     | . payload setup = 3 s
[2025-10-12 18:35:14] 2025-10-12 16:34:09,324 | INFO     | . stage-in = 0 s
[2025-10-12 18:35:14] 2025-10-12 16:34:09,324 | INFO     | . payload execution = 3401 s
[2025-10-12 18:35:14] 2025-10-12 16:34:09,324 | INFO     | . stage-out = 0 s
[2025-10-12 18:35:14] 2025-10-12 16:34:09,324 | INFO     | . log creation = 0 s
[2025-10-12 18:35:14] 2025-10-12 16:34:09,324 | INFO     | ..............................
[2025-10-12 18:35:14] 2025-10-12 16:34:09,394 | INFO     | 
[2025-10-12 18:35:14] 2025-10-12 16:34:09,394 | INFO     | job summary report
[2025-10-12 18:35:14] 2025-10-12 16:34:09,394 | INFO     | --------------------------------------------------
[2025-10-12 18:35:14] 2025-10-12 16:34:09,394 | INFO     | PanDA job id: 6829229592
[2025-10-12 18:35:14] 2025-10-12 16:34:09,394 | INFO     | task id: 46376905
[2025-10-12 18:35:14] 2025-10-12 16:34:09,395 | INFO     | errors: (none)
[2025-10-12 18:35:14] 2025-10-12 16:34:09,395 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:35:14] 2025-10-12 16:34:09,395 | INFO     | pilot state: finished 
[2025-10-12 18:35:14] 2025-10-12 16:34:09,395 | INFO     | transexitcode: 0
[2025-10-12 18:35:14] 2025-10-12 16:34:09,395 | INFO     | exeerrorcode: 0
[2025-10-12 18:35:14] 2025-10-12 16:34:09,395 | INFO     | exeerrordiag: 
[2025-10-12 18:35:14] 2025-10-12 16:34:09,395 | INFO     | exitcode: 0
[2025-10-12 18:35:14] 2025-10-12 16:34:09,395 | INFO     | exitmsg: OK
[2025-10-12 18:35:14] 2025-10-12 16:34:09,395 | INFO     | cpuconsumptiontime: 24826 s
[2025-10-12 18:35:14] 2025-10-12 16:34:09,395 | INFO     | nevents: 400
[2025-10-12 18:35:14] 2025-10-12 16:34:09,395 | INFO     | neventsw: 0
[2025-10-12 18:35:14] 2025-10-12 16:34:09,395 | INFO     | pid: 10609
[2025-10-12 18:35:14] 2025-10-12 16:34:09,395 | INFO     | pgrp: 10609
[2025-10-12 18:35:14] 2025-10-12 16:34:09,395 | INFO     | corecount: 8
[2025-10-12 18:35:14] 2025-10-12 16:34:09,395 | INFO     | event service: False
[2025-10-12 18:35:14] 2025-10-12 16:34:09,395 | INFO     | sizes: {0: 2348660, 1: 2348970, 3: 2349232, 11: 2349260, 3408: 2375021, 3409: 2384232, 3411: 2384232, 3413: 2384458}
[2025-10-12 18:35:14] 2025-10-12 16:34:09,395 | INFO     | --------------------------------------------------
[2025-10-12 18:35:14] 2025-10-12 16:34:09,395 | INFO     | 
[2025-10-12 18:35:14] 2025-10-12 16:34:09,395 | INFO     | executing command: ls -lF /tmp/job_10514907/atlas/pilot/slots/0
[2025-10-12 18:35:14] 2025-10-12 16:34:09,406 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:35:14] 2025-10-12 16:34:09,406 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:35:14] 2025-10-12 16:34:09,406 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:35:14] 2025-10-12 16:34:09,406 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:35:14] 2025-10-12 16:34:09,406 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:35:14] 2025-10-12 16:34:09,406 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:35:14] 2025-10-12 16:34:09,406 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:35:14] 2025-10-12 16:34:09,406 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:35:14] 2025-10-12 16:34:09,406 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:35:14] 2025-10-12 16:34:09,406 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:35:14] 2025-10-12 16:34:09,406 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:35:14] 2025-10-12 16:34:09,406 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:35:14] 2025-10-12 16:34:09,407 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:35:14] 2025-10-12 16:34:09,407 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:35:14] 2025-10-12 16:34:09,407 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:35:14] 2025-10-12 16:34:09,407 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:35:14] 2025-10-12 16:34:09,407 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:35:14] 2025-10-12 16:34:09,407 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:35:14] 2025-10-12 16:34:09,407 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:35:14] 2025-10-12 16:34:09,407 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:35:14] 2025-10-12 16:34:09,407 | INFO     | job 6829229592 has completed (purged errors)
[2025-10-12 18:35:14] 2025-10-12 16:34:09,407 | INFO     | overall cleanup function is called
[2025-10-12 18:35:14] 2025-10-12 16:34:10,413 | INFO     | --- collectZombieJob: --- 10, [10609]
[2025-10-12 18:35:14] 2025-10-12 16:34:10,414 | INFO     | zombie collector waiting for pid 10609
[2025-10-12 18:35:14] 2025-10-12 16:34:10,414 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:35:14] 2025-10-12 16:34:10,414 | INFO     | collected zombie processes
[2025-10-12 18:35:14] 2025-10-12 16:34:10,414 | INFO     | will attempt to kill all subprocesses of pid=10609
[2025-10-12 18:35:14] 2025-10-12 16:34:10,535 | INFO     | process IDs to be killed: [10609] (in reverse order)
[2025-10-12 18:35:14] 2025-10-12 16:34:10,569 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:35:14] 2025-10-12 16:34:10,569 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:35:14] 2025-10-12 16:34:10,575 | INFO     | did not find any defunct processes belonging to 10609
[2025-10-12 18:35:14] 2025-10-12 16:34:10,578 | INFO     | did not find any defunct processes belonging to 10609
[2025-10-12 18:35:14] 2025-10-12 16:34:10,579 | INFO     | ready for new job
[2025-10-12 18:35:14] 2025-10-12 16:34:10,579 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:35:14] 2025-10-12 16:34:10,579 | INFO     | ***************************************
[2025-10-12 18:35:14] 2025-10-12 16:34:10,579 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-12 18:35:14] 2025-10-12 16:34:10,580 | INFO     | ***************************************
[2025-10-12 18:35:14] 2025-10-12 16:34:10,580 | INFO     | 
[2025-10-12 18:35:14] 2025-10-12 16:34:10,593 | INFO     | architecture information:
[2025-10-12 18:35:14] 2025-10-12 16:34:10,593 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:35:14] 2025-10-12 16:34:10,600 | INFO     | cat /etc/os-release:
[2025-10-12 18:35:14] NAME="CentOS Linux"
[2025-10-12 18:35:14] VERSION="7 (Core)"
[2025-10-12 18:35:14] ID="centos"
[2025-10-12 18:35:14] ID_LIKE="rhel fedora"
[2025-10-12 18:35:14] VERSION_ID="7"
[2025-10-12 18:35:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:35:14] ANSI_COLOR="0;31"
[2025-10-12 18:35:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:35:14] HOME_URL="https://www.centos.org/"
[2025-10-12 18:35:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:35:14] 
[2025-10-12 18:35:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:35:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:35:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:35:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:35:14] 
[2025-10-12 18:35:14] 2025-10-12 16:34:10,600 | INFO     | ***************************************
[2025-10-12 18:35:14] 2025-10-12 16:34:11,103 | INFO     | executing command: df -mP /tmp/job_10514907/atlas/pilot/slots/0
[2025-10-12 18:35:14] 2025-10-12 16:34:11,109 | INFO     | sufficient remaining disk space (229545869312 B)
[2025-10-12 18:35:14] 2025-10-12 16:34:11,110 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:35:14] 2025-10-12 16:34:11,110 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:35:14] 2025-10-12 16:34:11,110 | INFO     | update_server=False
[2025-10-12 18:35:14] 2025-10-12 16:34:11,110 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:35:14] 2025-10-12 16:34:11,110 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:35:14] 2025-10-12 16:34:11,110 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:35:14] 2025-10-12 16:34:11,110 | INFO     | aborting loop
[2025-10-12 18:35:14] 2025-10-12 16:34:11,140 | INFO     | all payload control threads have been joined
[2025-10-12 18:35:14] 2025-10-12 16:34:11,554 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:35:14] 2025-10-12 16:34:11,582 | INFO     | all data control threads have been joined
[2025-10-12 18:35:14] 2025-10-12 16:34:12,115 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:35:14] 2025-10-12 16:34:12,115 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:35:14] 2025-10-12 16:34:12,116 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:35:14] 2025-10-12 16:34:12,145 | INFO     | [payload] control thread has finished
[2025-10-12 18:35:14] 2025-10-12 16:34:12,208 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:35:14] 2025-10-12 16:34:12,327 | INFO     | all job control threads have been joined
[2025-10-12 18:35:14] 2025-10-12 16:34:12,587 | INFO     | [data] control thread has finished
[2025-10-12 18:35:14] 2025-10-12 16:34:12,884 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:35:14] 2025-10-12 16:34:12,902 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:35:14] 2025-10-12 16:34:13,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:35:14] 2025-10-12 16:34:13,310 | INFO     | [job] validate thread has finished
[2025-10-12 18:35:14] 2025-10-12 16:34:13,332 | INFO     | [job] control thread has finished
[2025-10-12 18:35:14] 2025-10-12 16:34:13,521 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:35:14] 2025-10-12 16:34:13,542 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:35:14] 2025-10-12 16:34:13,559 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:35:14] 2025-10-12 16:34:13,706 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:35:14] 2025-10-12 16:34:17,209 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:35:14] 2025-10-12 16:34:22,104 | INFO     | job.realtimelogging is not enabled
[2025-10-12 18:35:14] 2025-10-12 16:34:23,109 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:35:14] 2025-10-12 16:34:40,624 | INFO     | PID=2047 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 18:35:14] 2025-10-12 16:34:40,624 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:35:14] 2025-10-12 16:34:40,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:35:14] 2025-10-12 16:34:40,625 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:35:14] 2025-10-12 16:35:08,825 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:35:14] 2025-10-12 16:35:09,113 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456066770688)>']
[2025-10-12 18:35:14] 2025-10-12 16:35:09,770 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:35:14] 2025-10-12 16:35:09,770 | INFO     | [monitor] control thread has ended
[2025-10-12 18:35:14] 2025-10-12 16:35:14,138 | INFO     | all workflow threads have been joined
[2025-10-12 18:35:14] 2025-10-12 16:35:14,138 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:35:14] 2025-10-12 16:35:14,138 | INFO     | traces error code: 0
[2025-10-12 18:35:14] 2025-10-12 16:35:14,139 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:35:14] 2025-10-12 16:35:14,201 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:35:14] 2025-10-12 16:35:14,203 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:35:14] 2025-10-12 16:35:14,204 [wrapper] pilotpid: 2047
[2025-10-12 18:35:14] 2025-10-12 16:35:14,205 [wrapper] Pilot exit status: 0
[2025-10-12 18:35:14] 2025-10-12 16:35:14,210 [wrapper] pandaids: 6829229592
[2025-10-12 18:35:14] 2025-10-12 16:35:14,236 [wrapper] cleanup supervisor_pilot 11868 2048
[2025-10-12 18:35:14] 2025-10-12 16:35:14,237 [wrapper] Test setup, not cleaning
[2025-10-12 18:35:14] 2025-10-12 16:35:14,238 [wrapper] apfmon messages muted
[2025-10-12 18:35:14] 2025-10-12 16:35:14,240 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:35:14] 2025-10-12 16:35:14,241 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:35:14]  *** Error codes and diagnostics ***
[2025-10-12 18:35:14]     "exeErrorCode": 0,
[2025-10-12 18:35:14]     "exeErrorDiag": "",
[2025-10-12 18:35:14]     "pilotErrorCode": 0,
[2025-10-12 18:35:14]     "pilotErrorDiag": "",
[2025-10-12 18:35:14]  *** Listing of results directory ***
[2025-10-12 18:35:14] total 393044
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user    563267 Aug  1 11:52 pilot3.tar.gz
[2025-10-12 18:35:14] -rwx------ 1 mf493845 unix-user     36292 Oct  4 06:23 runpilot2-wrapper.sh
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user      5112 Oct  4 06:23 queuedata.json
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user       100 Oct 12 16:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:35:14] -rwxr-xr-x 1 mf493845 unix-user      7986 Oct 12 16:41 run_atlas
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user       105 Oct 12 16:41 job.xml
[2025-10-12 18:35:14] -rw-r--r-- 2 mf493845 unix-user 216488452 Oct 12 17:36 EVNT.46376901._001871.pool.root.1
[2025-10-12 18:35:14] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 12 17:36 start_atlas.sh
[2025-10-12 18:35:14] drwxrwx--x 2 mf493845 unix-user       100 Oct 12 17:36 shared
[2025-10-12 18:35:14] -rw-r--r-- 2 mf493845 unix-user    576696 Oct 12 17:36 input.tar.gz
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user      6393 Oct 12 17:36 init_data.xml
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user         0 Oct 12 17:36 boinc_setup_complete
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user      8192 Oct 12 17:36 boinc_mmap_file
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user         0 Oct 12 17:36 boinc_lockfile
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user      2519 Oct 12 17:36 pandaJob.out
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user    975528 Oct 12 17:37 agis_schedconf.cvmfs.json
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user   1560580 Oct 12 17:37 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:35:14] drwx------ 4 mf493845 unix-user       420 Oct 12 17:37 pilot3
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user 180440927 Oct 12 18:33 HITS.46376905._052698.pool.root.1
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user        95 Oct 12 18:33 pilot_heartbeat.json
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user      1020 Oct 12 18:34 memory_monitor_summary.json
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user    310714 Oct 12 18:34 log.46376905._052698.job.log.tgz.1
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user      7775 Oct 12 18:34 heartbeat.json
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user      4831 Oct 12 18:35 pilotlog.txt
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user    521481 Oct 12 18:35 log.46376905._052698.job.log.1
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user       357 Oct 12 18:35 output.list
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user       620 Oct 12 18:35 runtime_log
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user    849920 Oct 12 18:35 result.tar.gz
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user      9076 Oct 12 18:35 runtime_log.err
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user       644 Oct 12 18:35 2Q1MDmsy8O8n9Rq4apOajLDm4fhM0noT9bVof3QYDmPsCMDm8gB4Sm.diag
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user     21889 Oct 12 18:35 stderr.txt
[2025-10-12 18:35:14] HITS file was successfully produced:
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user 180440927 Oct 12 18:33 shared/HITS.pool.root.1
[2025-10-12 18:35:14]  *** Contents of shared directory: ***
[2025-10-12 18:35:14] total 389040
[2025-10-12 18:35:14] -rw-r--r-- 2 mf493845 unix-user 216488452 Oct 12 17:36 ATLAS.root_0
[2025-10-12 18:35:14] -rw-r--r-- 2 mf493845 unix-user     15120 Oct 12 17:36 start_atlas.sh
[2025-10-12 18:35:14] -rw-r--r-- 2 mf493845 unix-user    576696 Oct 12 17:36 input.tar.gz
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user 180440927 Oct 12 18:33 HITS.pool.root.1
[2025-10-12 18:35:14] -rw------- 1 mf493845 unix-user    849920 Oct 12 18:35 result.tar.gz
18:35:15 (29659): run_atlas exited; CPU time 24889.381354
18:35:15 (29659): called boinc_finish(0)

</stderr_txt>
]]>

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