Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:43:16 (28487): wrapper (7.7.26015): starting
15:43:16 (28487): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:43:16] Arguments: --nthreads 8
[2025-10-12 15:43:16] Threads: 8
[2025-10-12 15:43:16] Checking for CVMFS
[2025-10-12 15:43:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:43:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:43:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:43:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:43:20] 2.11.2.0 3687 220680 138656 151621 1 11 16866478 25165824 4632 130560 0 127530394 99.888 62868085 2761 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 15:43:20] CVMFS is ok
[2025-10-12 15:43:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:43:20] Checking for apptainer binary...
[2025-10-12 15:43:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:43:20] Running /usr/bin/apptainer --version
[2025-10-12 15:43:20] apptainer version 1.3.2-1.el7
[2025-10-12 15:43:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:43:38] cg-vwn214.simple-grid.lan
[2025-10-12 15:43:38] apptainer works
[2025-10-12 15:43:38] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:43:38] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:43:38] Starting ATLAS job with PandaID=6839928847
[2025-10-12 15:43:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:58:05]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:58:05] 2025-10-12 17:56:57,453 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 19:58:05] 2025-10-12 17:56:57,453 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:58:05] 2025-10-12 17:56:57,458 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:58:05] 2025-10-12 17:56:57,459 | INFO     | sum of square deviations: 4075741535.0
[2025-10-12 19:58:05] 2025-10-12 17:56:57,461 | INFO     | sum of deviations: 103377904933.00002
[2025-10-12 19:58:05] 2025-10-12 17:56:57,461 | INFO     | mean x: 1760284500.5
[2025-10-12 19:58:05] 2025-10-12 17:56:57,461 | INFO     | mean y: 2423105.059322034
[2025-10-12 19:58:05] 2025-10-12 17:56:57,461 | INFO     | -- intersect: -44645777028.593765
[2025-10-12 19:58:05] 2025-10-12 17:56:57,461 | INFO     | intersect: -44645777028.593765
[2025-10-12 19:58:05] 2025-10-12 17:56:57,462 | INFO     | chi2: 5.737782914323635
[2025-10-12 19:58:05] 2025-10-12 17:56:57,462 | INFO     | sum of square deviations: 3822136780.0
[2025-10-12 19:58:05] 2025-10-12 17:56:57,464 | INFO     | sum of deviations: 116493800595.99998
[2025-10-12 19:58:05] 2025-10-12 17:56:57,464 | INFO     | mean x: 1760284348.0
[2025-10-12 19:58:05] 2025-10-12 17:56:57,470 | INFO     | mean y: 2430830.354978355
[2025-10-12 19:58:05] 2025-10-12 17:56:57,471 | INFO     | -- intersect: -53648766296.13086
[2025-10-12 19:58:05] 2025-10-12 17:56:57,471 | INFO     | intersect: -53648766296.13086
[2025-10-12 19:58:05] 2025-10-12 17:56:57,471 | INFO     | chi2: 5.0000252805018635
[2025-10-12 19:58:05] 2025-10-12 17:56:57,472 | INFO     | current chi2=5.0000252805018635 (change=12.857886832561311 %)
[2025-10-12 19:58:05] 2025-10-12 17:56:57,472 | INFO     | right removable region: 230
[2025-10-12 19:58:05] 2025-10-12 17:56:57,472 | INFO     | sum of square deviations: 3822136780.0
[2025-10-12 19:58:05] 2025-10-12 17:56:57,474 | INFO     | sum of deviations: 24428355423.0
[2025-10-12 19:58:05] 2025-10-12 17:56:57,474 | INFO     | mean x: 1760284653.0
[2025-10-12 19:58:05] 2025-10-12 17:56:57,474 | INFO     | mean y: 2470525.0995670995
[2025-10-12 19:58:05] 2025-10-12 17:56:57,474 | INFO     | -- intersect: -11248005746.22221
[2025-10-12 19:58:05] 2025-10-12 17:56:57,474 | INFO     | intersect: -11248005746.22221
[2025-10-12 19:58:05] 2025-10-12 17:56:57,475 | INFO     | chi2: 1.3167657240915969
[2025-10-12 19:58:05] 2025-10-12 17:56:57,475 | INFO     | current chi2=1.3167657240915969 (change=77.05096648385806 %)
[2025-10-12 19:58:05] 2025-10-12 17:56:57,476 | INFO     | sum of square deviations: 3579276412.5
[2025-10-12 19:58:05] 2025-10-12 17:56:57,478 | INFO     | sum of deviations: 3889709956.999998
[2025-10-12 19:58:05] 2025-10-12 17:56:57,478 | INFO     | mean x: 1760284805.5
[2025-10-12 19:58:05] 2025-10-12 17:56:57,478 | INFO     | mean y: 2483293.238938053
[2025-10-12 19:58:05] 2025-10-12 17:56:57,478 | INFO     | -- intersect: -1910472440.271111
[2025-10-12 19:58:05] 2025-10-12 17:56:57,478 | INFO     | intersect: -1910472440.271111
[2025-10-12 19:58:05] 2025-10-12 17:56:57,478 | INFO     | chi2: 0.8380122037841731
[2025-10-12 19:58:05] 2025-10-12 17:56:57,479 | INFO     | current chi2=0.8380122037841731 (change=36.35829149773044 %)
[2025-10-12 19:58:05] 2025-10-12 17:56:57,479 | INFO     | sum of square deviations: 3346927870.0
[2025-10-12 19:58:05] 2025-10-12 17:56:57,481 | INFO     | sum of deviations: -2378632108.999996
[2025-10-12 19:58:05] 2025-10-12 17:56:57,481 | INFO     | mean x: 1760284958.0
[2025-10-12 19:58:05] 2025-10-12 17:56:57,481 | INFO     | mean y: 2487367.773755656
[2025-10-12 19:58:05] 2025-10-12 17:56:57,481 | INFO     | -- intersect: 1253506357.34299
[2025-10-12 19:58:05] 2025-10-12 17:56:57,481 | INFO     | intersect: 1253506357.34299
[2025-10-12 19:58:05] 2025-10-12 17:56:57,482 | INFO     | chi2: 0.7966856167926804
[2025-10-12 19:58:05] 2025-10-12 17:56:57,482 | INFO     | current chi2=0.7966856167926804 (change=4.931501809266757 %)
[2025-10-12 19:58:05] 2025-10-12 17:56:57,482 | INFO     | left removable region: 30
[2025-10-12 19:58:05] 2025-10-12 17:56:57,482 | INFO     | sum of square deviations: 2480604650.0
[2025-10-12 19:58:05] 2025-10-12 17:56:57,484 | INFO     | sum of deviations: 7924888535.5
[2025-10-12 19:58:05] 2025-10-12 17:56:57,484 | INFO     | mean x: 1760285232.5
[2025-10-12 19:58:05] 2025-10-12 17:56:57,484 | INFO     | mean y: 2500158.245
[2025-10-12 19:58:05] 2025-10-12 17:56:57,484 | INFO     | -- intersect: -5621154646.340326
[2025-10-12 19:58:05] 2025-10-12 17:56:57,484 | INFO     | intersect: -5621154646.340326
[2025-10-12 19:58:05] 2025-10-12 17:56:57,490 | INFO     | chi2: 0.0013040667509795884
[2025-10-12 19:58:05] 2025-10-12 17:56:57,490 | INFO     | -- intersect: -5621154646.340326
[2025-10-12 19:58:05] 2025-10-12 17:56:57,490 | INFO     | current memory leak: 3.19 B/s (using 200 data points, chi2=0.00)
[2025-10-12 19:58:05] 2025-10-12 17:56:57,491 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-12 19:58:05] 2025-10-12 17:56:57,491 | INFO     | ..............................
[2025-10-12 19:58:05] 2025-10-12 17:56:57,491 | INFO     | . Timing measurements:
[2025-10-12 19:58:05] 2025-10-12 17:56:57,491 | INFO     | . get job = 0 s
[2025-10-12 19:58:05] 2025-10-12 17:56:57,498 | INFO     | . initial setup = 9 s
[2025-10-12 19:58:05] 2025-10-12 17:56:57,499 | INFO     | . payload setup = 126 s
[2025-10-12 19:58:05] 2025-10-12 17:56:57,499 | INFO     | . stage-in = 0 s
[2025-10-12 19:58:05] 2025-10-12 17:56:57,499 | INFO     | . payload execution = 14533 s
[2025-10-12 19:58:05] 2025-10-12 17:56:57,499 | INFO     | . stage-out = 5 s
[2025-10-12 19:58:05] 2025-10-12 17:56:57,499 | INFO     | . log creation = 1 s
[2025-10-12 19:58:05] 2025-10-12 17:56:57,499 | INFO     | ..............................
[2025-10-12 19:58:05] 2025-10-12 17:56:57,661 | INFO     | 
[2025-10-12 19:58:05] 2025-10-12 17:56:57,661 | INFO     | job summary report
[2025-10-12 19:58:05] 2025-10-12 17:56:57,661 | INFO     | --------------------------------------------------
[2025-10-12 19:58:05] 2025-10-12 17:56:57,661 | INFO     | PanDA job id: 6839928847
[2025-10-12 19:58:05] 2025-10-12 17:56:57,661 | INFO     | task id: 46676269
[2025-10-12 19:58:05] 2025-10-12 17:56:57,661 | INFO     | errors: (none)
[2025-10-12 19:58:05] 2025-10-12 17:56:57,661 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:58:05] 2025-10-12 17:56:57,661 | INFO     | pilot state: finished 
[2025-10-12 19:58:05] 2025-10-12 17:56:57,662 | INFO     | transexitcode: 0
[2025-10-12 19:58:05] 2025-10-12 17:56:57,662 | INFO     | exeerrorcode: 0
[2025-10-12 19:58:05] 2025-10-12 17:56:57,662 | INFO     | exeerrordiag: 
[2025-10-12 19:58:05] 2025-10-12 17:56:57,662 | INFO     | exitcode: 0
[2025-10-12 19:58:05] 2025-10-12 17:56:57,662 | INFO     | exitmsg: OK
[2025-10-12 19:58:05] 2025-10-12 17:56:57,662 | INFO     | cpuconsumptiontime: 54797 s
[2025-10-12 19:58:05] 2025-10-12 17:56:57,662 | INFO     | nevents: 400
[2025-10-12 19:58:05] 2025-10-12 17:56:57,662 | INFO     | neventsw: 0
[2025-10-12 19:58:05] 2025-10-12 17:56:57,662 | INFO     | pid: 6742
[2025-10-12 19:58:05] 2025-10-12 17:56:57,669 | INFO     | pgrp: 6742
[2025-10-12 19:58:05] 2025-10-12 17:56:57,669 | INFO     | corecount: 8
[2025-10-12 19:58:05] 2025-10-12 17:56:57,669 | INFO     | event service: False
[2025-10-12 19:58:05] 2025-10-12 17:56:57,669 | INFO     | sizes: {0: 2348580, 1: 2348835, 12: 2348835, 23: 2348863, 34: 2348891, 44: 2348919, 55: 2349075, 66: 2349103, 77: 2349131, 88: 2349187, 98: 2349215, 99: 2349785, 1
[2025-10-12 19:58:05] 2025-10-12 17:56:57,669 | INFO     | --------------------------------------------------
[2025-10-12 19:58:05] 2025-10-12 17:56:57,669 | INFO     | 
[2025-10-12 19:58:05] 2025-10-12 17:56:57,669 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-10-12 19:58:05] 2025-10-12 17:56:58,253 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:58:05] 2025-10-12 17:56:58,254 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:58:05] 2025-10-12 17:56:58,254 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:58:05] 2025-10-12 17:56:58,254 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:58:05] 2025-10-12 17:56:58,254 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:58:05] 2025-10-12 17:56:58,254 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:58:05] 2025-10-12 17:56:58,254 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:58:05] 2025-10-12 17:56:58,254 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:58:05] 2025-10-12 17:56:58,254 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:58:05] 2025-10-12 17:56:58,254 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:58:05] 2025-10-12 17:56:58,255 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:58:05] 2025-10-12 17:56:58,255 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:58:05] 2025-10-12 17:56:58,255 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:58:05] 2025-10-12 17:56:58,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:58:05] 2025-10-12 17:56:58,255 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:58:05] 2025-10-12 17:56:58,255 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:58:05] 2025-10-12 17:56:58,255 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:58:05] 2025-10-12 17:56:58,255 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:58:05] 2025-10-12 17:56:58,255 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:58:05] 2025-10-12 17:56:58,255 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:58:05] 2025-10-12 17:56:58,256 | INFO     | job 6839928847 has completed (purged errors)
[2025-10-12 19:58:05] 2025-10-12 17:56:58,256 | INFO     | overall cleanup function is called
[2025-10-12 19:58:05] 2025-10-12 17:56:59,264 | INFO     | --- collectZombieJob: --- 10, [6742]
[2025-10-12 19:58:05] 2025-10-12 17:56:59,265 | INFO     | zombie collector waiting for pid 6742
[2025-10-12 19:58:05] 2025-10-12 17:56:59,265 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:58:05] 2025-10-12 17:56:59,265 | INFO     | collected zombie processes
[2025-10-12 19:58:05] 2025-10-12 17:56:59,265 | INFO     | will attempt to kill all subprocesses of pid=6742
[2025-10-12 19:58:05] 2025-10-12 17:56:59,371 | INFO     | process IDs to be killed: [6742] (in reverse order)
[2025-10-12 19:58:05] 2025-10-12 17:57:00,249 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:58:05] 2025-10-12 17:57:00,250 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:58:05] 2025-10-12 17:57:00,253 | INFO     | did not find any defunct processes belonging to 6742
[2025-10-12 19:58:05] 2025-10-12 17:57:00,256 | INFO     | did not find any defunct processes belonging to 6742
[2025-10-12 19:58:05] 2025-10-12 17:57:00,256 | INFO     | ready for new job
[2025-10-12 19:58:05] 2025-10-12 17:57:00,256 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:58:05] 2025-10-12 17:57:00,258 | INFO     | ***************************************
[2025-10-12 19:58:05] 2025-10-12 17:57:00,258 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:58:05] 2025-10-12 17:57:00,259 | INFO     | ***************************************
[2025-10-12 19:58:05] 2025-10-12 17:57:00,259 | INFO     | 
[2025-10-12 19:58:05] 2025-10-12 17:57:00,259 | INFO     | pilot is running in a VM
[2025-10-12 19:58:05] 2025-10-12 17:57:00,259 | INFO     | architecture information:
[2025-10-12 19:58:05] 2025-10-12 17:57:00,260 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:58:05] 2025-10-12 17:57:00,507 | INFO     | cat /etc/os-release:
[2025-10-12 19:58:05] NAME="CentOS Linux"
[2025-10-12 19:58:05] VERSION="7 (Core)"
[2025-10-12 19:58:05] ID="centos"
[2025-10-12 19:58:05] ID_LIKE="rhel fedora"
[2025-10-12 19:58:05] VERSION_ID="7"
[2025-10-12 19:58:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:58:05] ANSI_COLOR="0;31"
[2025-10-12 19:58:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:58:05] HOME_URL="https://www.centos.org/"
[2025-10-12 19:58:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:58:05] 
[2025-10-12 19:58:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:58:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:58:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:58:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:58:05] 
[2025-10-12 19:58:05] 2025-10-12 17:57:00,508 | INFO     | ***************************************
[2025-10-12 19:58:05] 2025-10-12 17:57:01,011 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-10-12 19:58:05] 2025-10-12 17:57:01,174 | INFO     | sufficient remaining disk space (495959670784 B)
[2025-10-12 19:58:05] 2025-10-12 17:57:01,174 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:58:05] 2025-10-12 17:57:01,174 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:58:05] 2025-10-12 17:57:01,174 | INFO     | update_server=False
[2025-10-12 19:58:05] 2025-10-12 17:57:01,174 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:58:05] 2025-10-12 17:57:01,175 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:58:05] 2025-10-12 17:57:01,175 | INFO     | aborting loop
[2025-10-12 19:58:05] 2025-10-12 17:57:01,351 | INFO     | all data control threads have been joined
[2025-10-12 19:58:05] 2025-10-12 17:57:01,594 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:58:05] 2025-10-12 17:57:01,617 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:58:05] 2025-10-12 17:57:01,764 | INFO     | all payload control threads have been joined
[2025-10-12 19:58:05] 2025-10-12 17:57:01,959 | INFO     | all job control threads have been joined
[2025-10-12 19:58:05] 2025-10-12 17:57:02,181 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:58:05] 2025-10-12 17:57:02,181 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:58:05] 2025-10-12 17:57:02,301 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:58:05] 2025-10-12 17:57:02,353 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:58:05] 2025-10-12 17:57:02,357 | INFO     | [data] control thread has finished
[2025-10-12 19:58:05] 2025-10-12 17:57:02,397 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:58:05] 2025-10-12 17:57:02,676 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:58:05] 2025-10-12 17:57:02,770 | INFO     | [payload] control thread has finished
[2025-10-12 19:58:05] 2025-10-12 17:57:02,922 | INFO     | [job] validate thread has finished
[2025-10-12 19:58:05] 2025-10-12 17:57:02,966 | INFO     | [job] control thread has finished
[2025-10-12 19:58:05] 2025-10-12 17:57:03,023 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:58:05] 2025-10-12 17:57:03,180 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:58:05] 2025-10-12 17:57:03,448 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:58:05] 2025-10-12 17:57:03,624 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:58:05] 2025-10-12 17:57:03,628 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:58:05] 2025-10-12 17:57:03,682 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:58:05] 2025-10-12 17:57:05,605 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:58:05] 2025-10-12 17:57:30,551 | INFO     | PID=32557 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 19:58:05] 2025-10-12 17:57:30,551 | INFO     | .. there are 9 such processes running
[2025-10-12 19:58:05] 2025-10-12 17:57:30,552 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:58:05] 2025-10-12 17:57:30,552 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:58:05] 2025-10-12 17:57:30,552 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:58:05] 2025-10-12 17:57:54,306 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:58:05] 2025-10-12 17:57:55,389 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139887556409152)>', '<ExcThread(monitor, started 139887118366464)>']
[2025-10-12 19:58:05] 2025-10-12 17:57:55,701 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:58:05] 2025-10-12 17:57:55,702 | INFO     | [monitor] control thread has ended
[2025-10-12 19:58:05] 2025-10-12 17:58:00,415 | INFO     | all workflow threads have been joined
[2025-10-12 19:58:05] 2025-10-12 17:58:00,415 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:58:05] 2025-10-12 17:58:00,415 | INFO     | traces error code: 0
[2025-10-12 19:58:05] 2025-10-12 17:58:00,415 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:58:05] 2025-10-12 17:58:00,793 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:58:05] 2025-10-12 17:58:00,862 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:58:05] 2025-10-12 17:58:00,910 [wrapper] pilotpid: 32557
[2025-10-12 19:58:05] 2025-10-12 17:58:00,962 [wrapper] Pilot exit status: 0
[2025-10-12 19:58:05] 2025-10-12 17:58:01,367 [wrapper] pandaids: 6839928847
[2025-10-12 19:58:05] 2025-10-12 17:58:02,312 [wrapper] cleanup supervisor_pilot  1061 32558
[2025-10-12 19:58:05] 2025-10-12 17:58:02,435 [wrapper] Test setup, not cleaning
[2025-10-12 19:58:05] 2025-10-12 17:58:02,536 [wrapper] apfmon messages muted
[2025-10-12 19:58:05] 2025-10-12 17:58:02,647 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:58:05] 2025-10-12 17:58:02,713 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:58:05]  *** Error codes and diagnostics ***
[2025-10-12 19:58:05]     "exeErrorCode": 0,
[2025-10-12 19:58:05]     "exeErrorDiag": "",
[2025-10-12 19:58:05]     "pilotErrorCode": 0,
[2025-10-12 19:58:05]     "pilotErrorDiag": "",
[2025-10-12 19:58:05]  *** Listing of results directory ***
[2025-10-12 19:58:05] total 411612
[2025-10-12 19:58:05] -rw-r--r--. 1 boinc boinc    557409 Oct 12 14:10 pilot3.tar.gz
[2025-10-12 19:58:05] -rw-r--r--. 1 boinc boinc      5112 Oct 12 14:15 queuedata.json
[2025-10-12 19:58:05] -rwx------. 1 boinc boinc     36292 Oct 12 14:16 runpilot2-wrapper.sh
[2025-10-12 19:58:05] -rw-r--r--. 1 boinc boinc       100 Oct 12 15:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:58:05] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 15:43 run_atlas
[2025-10-12 19:58:05] -rw-r--r--. 1 boinc boinc       105 Oct 12 15:43 job.xml
[2025-10-12 19:58:05] -rw-r--r--. 1 boinc boinc      6390 Oct 12 15:43 init_data.xml
[2025-10-12 19:58:05] -rw-r--r--. 2 boinc boinc 221143632 Oct 12 15:43 EVNT.46676267._003758.pool.root.1
[2025-10-12 19:58:05] -rw-r--r--. 2 boinc boinc     15120 Oct 12 15:43 start_atlas.sh
[2025-10-12 19:58:05] drwxrwx--x. 2 boinc boinc        68 Oct 12 15:43 shared
[2025-10-12 19:58:05] -rw-r--r--. 2 boinc boinc    569682 Oct 12 15:43 input.tar.gz
[2025-10-12 19:58:05] -rw-r--r--. 1 boinc boinc         0 Oct 12 15:43 boinc_lockfile
[2025-10-12 19:58:05] -rw-r--r--. 1 boinc boinc      2549 Oct 12 15:43 pandaJob.out
[2025-10-12 19:58:05] -rw-------. 1 boinc boinc    975528 Oct 12 15:47 agis_schedconf.cvmfs.json
[2025-10-12 19:58:05] drwx------. 5 boinc boinc      4096 Oct 12 15:47 pilot3
[2025-10-12 19:58:05] -rw-------. 1 boinc boinc 191551325 Oct 12 19:53 HITS.46676269._077984.pool.root.1
[2025-10-12 19:58:05] -rw-r--r--. 1 boinc boinc       531 Oct 12 19:54 boinc_task_state.xml
[2025-10-12 19:58:05] -rw-------. 1 boinc boinc      1014 Oct 12 19:55 memory_monitor_summary.json
[2025-10-12 19:58:05] -rw-------. 1 boinc boinc   1560580 Oct 12 19:55 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:58:05] -rw-------. 1 boinc boinc    452963 Oct 12 19:55 log.46676269._077984.job.log.tgz.1
[2025-10-12 19:58:05] -rw-------. 1 boinc boinc      7777 Oct 12 19:56 heartbeat.json
[2025-10-12 19:58:05] -rw-------. 1 boinc boinc        95 Oct 12 19:57 pilot_heartbeat.json
[2025-10-12 19:58:05] -rw-r--r--. 1 boinc boinc      8192 Oct 12 19:57 boinc_mmap_file
[2025-10-12 19:58:05] -rw-r--r--. 1 boinc boinc        28 Oct 12 19:57 wrapper_checkpoint.txt
[2025-10-12 19:58:05] -rw-------. 1 boinc boinc      4885 Oct 12 19:58 pilotlog.txt
[2025-10-12 19:58:05] -rw-------. 1 boinc boinc   2000547 Oct 12 19:58 log.46676269._077984.job.log.1
[2025-10-12 19:58:05] -rw-------. 1 boinc boinc       357 Oct 12 19:58 output.list
[2025-10-12 19:58:05] -rw-r--r--. 1 boinc boinc       620 Oct 12 19:58 runtime_log
[2025-10-12 19:58:05] -rw-------. 1 boinc boinc   2467840 Oct 12 19:58 result.tar.gz
[2025-10-12 19:58:05] -rw-------. 1 boinc boinc       657 Oct 12 19:58 sfSMDm8AAS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqjjNDmMbtkJm.diag
[2025-10-12 19:58:05] -rw-r--r--. 1 boinc boinc      8717 Oct 12 19:58 runtime_log.err
[2025-10-12 19:58:05] -rw-r--r--. 1 boinc boinc     20598 Oct 12 19:58 stderr.txt
[2025-10-12 19:58:05] HITS file was successfully produced:
[2025-10-12 19:58:05] -rw-------. 1 boinc boinc 191551325 Oct 12 19:53 shared/HITS.pool.root.1
[2025-10-12 19:58:05]  *** Contents of shared directory: ***
[2025-10-12 19:58:05] total 406016
[2025-10-12 19:58:05] -rw-r--r--. 2 boinc boinc 221143632 Oct 12 15:43 ATLAS.root_0
[2025-10-12 19:58:05] -rw-r--r--. 2 boinc boinc     15120 Oct 12 15:43 start_atlas.sh
[2025-10-12 19:58:05] -rw-r--r--. 2 boinc boinc    569682 Oct 12 15:43 input.tar.gz
[2025-10-12 19:58:05] -rw-------. 1 boinc boinc 191551325 Oct 12 19:53 HITS.pool.root.1
[2025-10-12 19:58:05] -rw-------. 1 boinc boinc   2467840 Oct 12 19:58 result.tar.gz
19:58:07 (28487): run_atlas exited; CPU time 55006.988606
19:58:07 (28487): called boinc_finish(0)

</stderr_txt>
]]>

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