Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
11:36:14 (111307): wrapper (7.7.26015): starting
11:36:14 (111307): wrapper: running run_atlas (--nthreads 5)
[2025-10-12 11:36:14] Arguments: --nthreads 5
[2025-10-12 11:36:14] Threads: 5
[2025-10-12 11:36:14] Checking for CVMFS
[2025-10-12 11:36:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:36:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:36:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:36:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:36:14] 2.11.0.0 2490241 3322 105712 151625 0 188 2659575 4096001 6206 130560 0 16790432 99.997 258528 5260 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 11:36:14] CVMFS is ok
[2025-10-12 11:36:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:36:14] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 11:36:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 11:36:14] Further information can be found at the LHC@home message board.
[2025-10-12 11:36:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:36:14] Checking for apptainer binary...
[2025-10-12 11:36:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:36:14] Running /usr/bin/apptainer --version
[2025-10-12 11:36:14] apptainer version 1.4.3
[2025-10-12 11:36:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:36:14] x32-linux4
[2025-10-12 11:36:14] apptainer works
[2025-10-12 11:36:15] Set ATHENA_PROC_NUMBER=5
[2025-10-12 11:36:15] Set ATHENA_CORE_NUMBER=5
[2025-10-12 11:36:15] Starting ATLAS job with PandaID=6839928771
[2025-10-12 11:36:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:37:42]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:37:42] 2025-10-12 17:37:08,669 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:37:42] 2025-10-12 17:37:08,669 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:37:42] 2025-10-12 17:37:08,671 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:37:42] 2025-10-12 17:37:08,671 | INFO     | sum of square deviations: 522502820.0
[2025-10-12 13:37:42] 2025-10-12 17:37:08,672 | INFO     | sum of deviations: -6492113490.0
[2025-10-12 13:37:42] 2025-10-12 17:37:08,672 | INFO     | mean x: 1760287011.0
[2025-10-12 13:37:42] 2025-10-12 17:37:08,672 | INFO     | mean y: 2373323.504201681
[2025-10-12 13:37:42] 2025-10-12 17:37:08,672 | INFO     | -- intersect: 21873993175.019794
[2025-10-12 13:37:42] 2025-10-12 17:37:08,672 | INFO     | intersect: 21873993175.019794
[2025-10-12 13:37:42] 2025-10-12 17:37:08,672 | INFO     | chi2: 1.9656259810502208
[2025-10-12 13:37:42] 2025-10-12 17:37:08,672 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 13:37:42] 2025-10-12 17:37:08,673 | INFO     | sum of deviations: 1614262458.9999998
[2025-10-12 13:37:42] 2025-10-12 17:37:08,673 | INFO     | mean x: 1760286858.5
[2025-10-12 13:37:42] 2025-10-12 17:37:08,673 | INFO     | mean y: 2392289.4210526315
[2025-10-12 13:37:42] 2025-10-12 17:37:08,673 | INFO     | -- intersect: -6183438481.489157
[2025-10-12 13:37:42] 2025-10-12 17:37:08,673 | INFO     | intersect: -6183438481.489157
[2025-10-12 13:37:42] 2025-10-12 17:37:08,673 | INFO     | chi2: 1.170064645164774
[2025-10-12 13:37:42] 2025-10-12 17:37:08,673 | INFO     | current chi2=1.170064645164774 (change=40.47368846134114 %)
[2025-10-12 13:37:42] 2025-10-12 17:37:08,673 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 13:37:42] 2025-10-12 17:37:08,673 | INFO     | sum of deviations: 2097379652.999999
[2025-10-12 13:37:42] 2025-10-12 17:37:08,673 | INFO     | mean x: 1760286706.0
[2025-10-12 13:37:42] 2025-10-12 17:37:08,674 | INFO     | mean y: 2393564.1834862386
[2025-10-12 13:37:42] 2025-10-12 17:37:08,674 | INFO     | -- intersect: -9192338896.635975
[2025-10-12 13:37:42] 2025-10-12 17:37:08,674 | INFO     | intersect: -9192338896.635975
[2025-10-12 13:37:42] 2025-10-12 17:37:08,674 | INFO     | chi2: 1.1717795073855113
[2025-10-12 13:37:42] 2025-10-12 17:37:08,674 | INFO     | current chi2=1.1717795073855113 (change=-0.14656132272894634 %)
[2025-10-12 13:37:42] 2025-10-12 17:37:08,674 | INFO     | right removable region: 108
[2025-10-12 13:37:42] 2025-10-12 17:37:08,674 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 13:37:42] 2025-10-12 17:37:08,674 | INFO     | sum of deviations: -18548787554.499992
[2025-10-12 13:37:42] 2025-10-12 17:37:08,674 | INFO     | mean x: 1760287163.5
[2025-10-12 13:37:42] 2025-10-12 17:37:08,674 | INFO     | mean y: 2401688.0614035088
[2025-10-12 13:37:42] 2025-10-12 17:37:08,675 | INFO     | -- intersect: 71081103951.51024
[2025-10-12 13:37:42] 2025-10-12 17:37:08,675 | INFO     | intersect: 71081103951.51024
[2025-10-12 13:37:42] 2025-10-12 17:37:08,675 | INFO     | chi2: 0.849396453780212
[2025-10-12 13:37:42] 2025-10-12 17:37:08,675 | INFO     | current chi2=0.849396453780212 (change=56.78748337837979 %)
[2025-10-12 13:37:42] 2025-10-12 17:37:08,675 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 13:37:42] 2025-10-12 17:37:08,675 | INFO     | sum of deviations: -17688604564.0
[2025-10-12 13:37:42] 2025-10-12 17:37:08,675 | INFO     | mean x: 1760287316.0
[2025-10-12 13:37:42] 2025-10-12 17:37:08,675 | INFO     | mean y: 2399404.5871559633
[2025-10-12 13:37:42] 2025-10-12 17:37:08,675 | INFO     | -- intersect: 77547751148.42943
[2025-10-12 13:37:42] 2025-10-12 17:37:08,676 | INFO     | intersect: 77547751148.42943
[2025-10-12 13:37:42] 2025-10-12 17:37:08,676 | INFO     | chi2: 0.8477064235968799
[2025-10-12 13:37:42] 2025-10-12 17:37:08,676 | INFO     | current chi2=0.8477064235968799 (change=0.1989683587458731 %)
[2025-10-12 13:37:42] 2025-10-12 17:37:08,676 | INFO     | left removable region: 20
[2025-10-12 13:37:42] 2025-10-12 17:37:08,676 | INFO     | sum of square deviations: 211285822.0
[2025-10-12 13:37:42] 2025-10-12 17:37:08,676 | INFO     | sum of deviations: -7160125069.499999
[2025-10-12 13:37:42] 2025-10-12 17:37:08,676 | INFO     | mean x: 1760287285.5
[2025-10-12 13:37:42] 2025-10-12 17:37:08,676 | INFO     | mean y: 2418958.6931818184
[2025-10-12 13:37:42] 2025-10-12 17:37:08,676 | INFO     | -- intersect: 59655627125.35687
[2025-10-12 13:37:42] 2025-10-12 17:37:08,676 | INFO     | intersect: 59655627125.35687
[2025-10-12 13:37:42] 2025-10-12 17:37:08,677 | INFO     | chi2: 0.01867118201755314
[2025-10-12 13:37:42] 2025-10-12 17:37:08,677 | INFO     | -- intersect: 59655627125.35687
[2025-10-12 13:37:42] 2025-10-12 17:37:08,677 | INFO     | current memory leak: -33.89 B/s (using 88 data points, chi2=0.02)
[2025-10-12 13:37:42] 2025-10-12 17:37:08,677 | INFO     | could have reported an average CPU frequency of 3846 MHz (7 samples)
[2025-10-12 13:37:42] 2025-10-12 17:37:08,677 | INFO     | ..............................
[2025-10-12 13:37:42] 2025-10-12 17:37:08,677 | INFO     | . Timing measurements:
[2025-10-12 13:37:42] 2025-10-12 17:37:08,677 | INFO     | . get job = 0 s
[2025-10-12 13:37:42] 2025-10-12 17:37:08,677 | INFO     | . initial setup = 2 s
[2025-10-12 13:37:42] 2025-10-12 17:37:08,677 | INFO     | . payload setup = 5 s
[2025-10-12 13:37:42] 2025-10-12 17:37:08,677 | INFO     | . stage-in = 0 s
[2025-10-12 13:37:42] 2025-10-12 17:37:08,677 | INFO     | . payload execution = 7212 s
[2025-10-12 13:37:42] 2025-10-12 17:37:08,677 | INFO     | . stage-out = 0 s
[2025-10-12 13:37:42] 2025-10-12 17:37:08,677 | INFO     | . log creation = 0 s
[2025-10-12 13:37:42] 2025-10-12 17:37:08,678 | INFO     | ..............................
[2025-10-12 13:37:42] 2025-10-12 17:37:08,746 | INFO     | 
[2025-10-12 13:37:42] 2025-10-12 17:37:08,746 | INFO     | job summary report
[2025-10-12 13:37:42] 2025-10-12 17:37:08,746 | INFO     | --------------------------------------------------
[2025-10-12 13:37:42] 2025-10-12 17:37:08,746 | INFO     | PanDA job id: 6839928771
[2025-10-12 13:37:42] 2025-10-12 17:37:08,746 | INFO     | task id: 46676269
[2025-10-12 13:37:42] 2025-10-12 17:37:08,746 | INFO     | errors: (none)
[2025-10-12 13:37:42] 2025-10-12 17:37:08,746 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:37:42] 2025-10-12 17:37:08,746 | INFO     | pilot state: finished 
[2025-10-12 13:37:42] 2025-10-12 17:37:08,746 | INFO     | transexitcode: 0
[2025-10-12 13:37:42] 2025-10-12 17:37:08,746 | INFO     | exeerrorcode: 0
[2025-10-12 13:37:42] 2025-10-12 17:37:08,746 | INFO     | exeerrordiag: 
[2025-10-12 13:37:42] 2025-10-12 17:37:08,746 | INFO     | exitcode: 0
[2025-10-12 13:37:42] 2025-10-12 17:37:08,746 | INFO     | exitmsg: OK
[2025-10-12 13:37:42] 2025-10-12 17:37:08,746 | INFO     | cpuconsumptiontime: 28618 s
[2025-10-12 13:37:42] 2025-10-12 17:37:08,746 | INFO     | nevents: 400
[2025-10-12 13:37:42] 2025-10-12 17:37:08,746 | INFO     | neventsw: 0
[2025-10-12 13:37:42] 2025-10-12 17:37:08,747 | INFO     | pid: 121806
[2025-10-12 13:37:42] 2025-10-12 17:37:08,747 | INFO     | pgrp: 121806
[2025-10-12 13:37:42] 2025-10-12 17:37:08,747 | INFO     | corecount: 5
[2025-10-12 13:37:42] 2025-10-12 17:37:08,747 | INFO     | event service: False
[2025-10-12 13:37:42] 2025-10-12 17:37:08,747 | INFO     | sizes: {0: 2348778, 1: 2348920, 4: 2349182, 11: 2349210, 7221: 2376627, 7222: 2385639, 7223: 2385823, 7228: 2386017}
[2025-10-12 13:37:42] 2025-10-12 17:37:08,747 | INFO     | --------------------------------------------------
[2025-10-12 13:37:42] 2025-10-12 17:37:08,747 | INFO     | 
[2025-10-12 13:37:42] 2025-10-12 17:37:08,747 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-10-12 13:37:42] 2025-10-12 17:37:08,763 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:37:42] 2025-10-12 17:37:08,763 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:37:42] 2025-10-12 17:37:08,763 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:37:42] 2025-10-12 17:37:08,763 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:37:42] 2025-10-12 17:37:08,764 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:37:42] 2025-10-12 17:37:08,764 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:37:42] 2025-10-12 17:37:08,764 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:37:42] 2025-10-12 17:37:08,764 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:37:42] 2025-10-12 17:37:08,764 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:37:42] 2025-10-12 17:37:08,764 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:37:42] 2025-10-12 17:37:08,764 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:37:42] 2025-10-12 17:37:08,764 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:37:42] 2025-10-12 17:37:08,764 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:37:42] 2025-10-12 17:37:08,764 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:37:42] 2025-10-12 17:37:08,764 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:37:42] 2025-10-12 17:37:08,764 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:37:42] 2025-10-12 17:37:08,764 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:37:42] 2025-10-12 17:37:08,764 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:37:42] 2025-10-12 17:37:08,764 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:37:42] 2025-10-12 17:37:08,764 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:37:42] 2025-10-12 17:37:08,765 | INFO     | job 6839928771 has completed (purged errors)
[2025-10-12 13:37:42] 2025-10-12 17:37:08,765 | INFO     | overall cleanup function is called
[2025-10-12 13:37:42] 2025-10-12 17:37:09,772 | INFO     | --- collectZombieJob: --- 10, [121806]
[2025-10-12 13:37:42] 2025-10-12 17:37:09,772 | INFO     | zombie collector waiting for pid 121806
[2025-10-12 13:37:42] 2025-10-12 17:37:09,772 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:37:42] 2025-10-12 17:37:09,772 | INFO     | collected zombie processes
[2025-10-12 13:37:42] 2025-10-12 17:37:09,772 | INFO     | will attempt to kill all subprocesses of pid=121806
[2025-10-12 13:37:42] 2025-10-12 17:37:09,924 | INFO     | process IDs to be killed: [121806] (in reverse order)
[2025-10-12 13:37:42] 2025-10-12 17:37:09,980 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:37:42] 2025-10-12 17:37:09,980 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:37:42] 2025-10-12 17:37:09,984 | INFO     | did not find any defunct processes belonging to 121806
[2025-10-12 13:37:42] 2025-10-12 17:37:09,989 | INFO     | did not find any defunct processes belonging to 121806
[2025-10-12 13:37:42] 2025-10-12 17:37:09,989 | INFO     | ready for new job
[2025-10-12 13:37:42] 2025-10-12 17:37:09,989 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:37:42] 2025-10-12 17:37:09,990 | INFO     | ***************************************
[2025-10-12 13:37:42] 2025-10-12 17:37:09,990 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:37:42] 2025-10-12 17:37:09,990 | INFO     | ***************************************
[2025-10-12 13:37:42] 2025-10-12 17:37:09,990 | INFO     | 
[2025-10-12 13:37:42] 2025-10-12 17:37:09,992 | INFO     | architecture information:
[2025-10-12 13:37:42] 2025-10-12 17:37:09,992 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:37:42] 2025-10-12 17:37:10,005 | INFO     | cat /etc/os-release:
[2025-10-12 13:37:42] NAME="CentOS Linux"
[2025-10-12 13:37:42] VERSION="7 (Core)"
[2025-10-12 13:37:42] ID="centos"
[2025-10-12 13:37:42] ID_LIKE="rhel fedora"
[2025-10-12 13:37:42] VERSION_ID="7"
[2025-10-12 13:37:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:37:42] ANSI_COLOR="0;31"
[2025-10-12 13:37:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:37:42] HOME_URL="https://www.centos.org/"
[2025-10-12 13:37:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:37:42] 
[2025-10-12 13:37:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:37:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:37:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:37:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:37:42] 
[2025-10-12 13:37:42] 2025-10-12 17:37:10,005 | INFO     | ***************************************
[2025-10-12 13:37:42] 2025-10-12 17:37:10,508 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-10-12 13:37:42] 2025-10-12 17:37:10,520 | INFO     | sufficient remaining disk space (149082341376 B)
[2025-10-12 13:37:42] 2025-10-12 17:37:10,520 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:37:42] 2025-10-12 17:37:10,520 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:37:42] 2025-10-12 17:37:10,520 | INFO     | update_server=False
[2025-10-12 13:37:42] 2025-10-12 17:37:10,520 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:37:42] 2025-10-12 17:37:10,521 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:37:42] 2025-10-12 17:37:10,521 | INFO     | aborting loop
[2025-10-12 13:37:42] 2025-10-12 17:37:10,521 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:37:42] 2025-10-12 17:37:10,521 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:37:42] 2025-10-12 17:37:10,804 | INFO     | all payload control threads have been joined
[2025-10-12 13:37:42] 2025-10-12 17:37:10,812 | INFO     | all data control threads have been joined
[2025-10-12 13:37:42] 2025-10-12 17:37:11,161 | INFO     | all job control threads have been joined
[2025-10-12 13:37:42] 2025-10-12 17:37:11,524 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:37:42] 2025-10-12 17:37:11,525 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:37:42] 2025-10-12 17:37:11,526 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:37:42] 2025-10-12 17:37:11,649 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:37:42] 2025-10-12 17:37:11,808 | INFO     | [payload] control thread has finished
[2025-10-12 13:37:42] 2025-10-12 17:37:11,819 | INFO     | [data] control thread has finished
[2025-10-12 13:37:42] 2025-10-12 17:37:11,978 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:37:42] 2025-10-12 17:37:12,086 | INFO     | [job] validate thread has finished
[2025-10-12 13:37:42] 2025-10-12 17:37:12,166 | INFO     | [job] control thread has finished
[2025-10-12 13:37:42] 2025-10-12 17:37:12,175 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:37:42] 2025-10-12 17:37:12,342 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:37:42] 2025-10-12 17:37:12,526 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:37:42] 2025-10-12 17:37:12,801 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:37:42] 2025-10-12 17:37:12,816 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:37:42] 2025-10-12 17:37:13,901 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:37:42] 2025-10-12 17:37:17,907 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:37:42] 2025-10-12 17:37:21,006 | INFO     | job.realtimelogging is not enabled
[2025-10-12 13:37:42] 2025-10-12 17:37:22,011 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:37:42] 2025-10-12 17:37:36,978 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:37:42] 2025-10-12 17:37:37,563 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128295064893248)>', '<ExcThread(monitor, started 128294288615168)>']
[2025-10-12 13:37:42] 2025-10-12 17:37:40,521 | INFO     | PID=115161 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 13:37:42] 2025-10-12 17:37:40,521 | INFO     | .. there are 8 such processes running
[2025-10-12 13:37:42] 2025-10-12 17:37:40,521 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:37:42] 2025-10-12 17:37:40,522 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:37:42] 2025-10-12 17:37:40,522 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:37:42] 2025-10-12 17:37:40,522 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:37:42] 2025-10-12 17:37:40,522 | INFO     | [monitor] control thread has ended
[2025-10-12 13:37:42] 2025-10-12 17:37:42,588 | INFO     | all workflow threads have been joined
[2025-10-12 13:37:42] 2025-10-12 17:37:42,588 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:37:42] 2025-10-12 17:37:42,588 | INFO     | traces error code: 0
[2025-10-12 13:37:42] 2025-10-12 17:37:42,588 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:37:42] 2025-10-12 17:37:42,658 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:37:42] 2025-10-12 17:37:42,660 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:37:42] 2025-10-12 17:37:42,662 [wrapper] pilotpid: 115161
[2025-10-12 13:37:42] 2025-10-12 17:37:42,664 [wrapper] Pilot exit status: 0
[2025-10-12 13:37:42] 2025-10-12 17:37:42,671 [wrapper] pandaids: 6839928771
[2025-10-12 13:37:42] 2025-10-12 17:37:42,707 [wrapper] cleanup supervisor_pilot  316466 115162
[2025-10-12 13:37:42] 2025-10-12 17:37:42,709 [wrapper] Test setup, not cleaning
[2025-10-12 13:37:42] 2025-10-12 17:37:42,711 [wrapper] apfmon messages muted
[2025-10-12 13:37:42] 2025-10-12 17:37:42,713 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:37:42] 2025-10-12 17:37:42,714 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:37:42]  *** Error codes and diagnostics ***
[2025-10-12 13:37:42]     "exeErrorCode": 0,
[2025-10-12 13:37:42]     "exeErrorDiag": "",
[2025-10-12 13:37:42]     "pilotErrorCode": 0,
[2025-10-12 13:37:42]     "pilotErrorDiag": "",
[2025-10-12 13:37:42]  *** Listing of results directory ***
[2025-10-12 13:37:42] total 411180
[2025-10-12 13:37:42] -rw-r--r-- 1 boinc boinc    557409 Oct 12 08:10 pilot3.tar.gz
[2025-10-12 13:37:42] -rw-r--r-- 1 boinc boinc      5112 Oct 12 08:15 queuedata.json
[2025-10-12 13:37:42] -rwx------ 1 boinc boinc     36292 Oct 12 08:15 runpilot2-wrapper.sh
[2025-10-12 13:37:42] -rw-r--r-- 1 boinc boinc       100 Oct 12 11:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:37:42] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 11:36 run_atlas
[2025-10-12 13:37:42] -rw-r--r-- 1 boinc boinc       105 Oct 12 11:36 job.xml
[2025-10-12 13:37:42] -rw-r--r-- 2 boinc boinc 220666605 Oct 12 11:36 EVNT.46676267._003754.pool.root.1
[2025-10-12 13:37:42] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:36 start_atlas.sh
[2025-10-12 13:37:42] drwxrwx--x 2 boinc boinc      4096 Oct 12 11:36 shared
[2025-10-12 13:37:42] -rw-r--r-- 2 boinc boinc    569678 Oct 12 11:36 input.tar.gz
[2025-10-12 13:37:42] -rw-r--r-- 1 boinc boinc      9723 Oct 12 11:36 init_data.xml
[2025-10-12 13:37:42] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:36 boinc_setup_complete
[2025-10-12 13:37:42] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:36 boinc_lockfile
[2025-10-12 13:37:42] -rw-r--r-- 1 boinc boinc      2550 Oct 12 11:36 pandaJob.out
[2025-10-12 13:37:42] -rw------- 1 boinc boinc    975528 Oct 12 11:36 agis_schedconf.cvmfs.json
[2025-10-12 13:37:42] -rw------- 1 boinc boinc   1560580 Oct 12 11:36 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:37:42] drwx------ 5 boinc boinc      4096 Oct 12 11:36 pilot3
[2025-10-12 13:37:42] -rw-r--r-- 1 boinc boinc       529 Oct 12 13:36 boinc_task_state.xml
[2025-10-12 13:37:42] -rw------- 1 boinc boinc 193746712 Oct 12 13:36 HITS.46676269._077908.pool.root.1
[2025-10-12 13:37:42] -rw------- 1 boinc boinc      1025 Oct 12 13:36 memory_monitor_summary.json
[2025-10-12 13:37:42] -rw------- 1 boinc boinc    308789 Oct 12 13:37 log.46676269._077908.job.log.tgz.1
[2025-10-12 13:37:42] -rw------- 1 boinc boinc      7745 Oct 12 13:37 heartbeat.json
[2025-10-12 13:37:42] -rw-r--r-- 1 boinc boinc        27 Oct 12 13:37 wrapper_checkpoint.txt
[2025-10-12 13:37:42] -rw-r--r-- 1 boinc boinc      8192 Oct 12 13:37 boinc_mmap_file
[2025-10-12 13:37:42] -rw------- 1 boinc boinc        95 Oct 12 13:37 pilot_heartbeat.json
[2025-10-12 13:37:42] -rw------- 1 boinc boinc      4902 Oct 12 13:37 pilotlog.txt
[2025-10-12 13:37:42] -rw------- 1 boinc boinc   1051346 Oct 12 13:37 log.46676269._077908.job.log.1
[2025-10-12 13:37:42] -rw------- 1 boinc boinc       357 Oct 12 13:37 output.list
[2025-10-12 13:37:42] -rw-r--r-- 1 boinc boinc       620 Oct 12 13:37 runtime_log
[2025-10-12 13:37:42] -rw------- 1 boinc boinc   1382400 Oct 12 13:37 result.tar.gz
[2025-10-12 13:37:42] -rw-r--r-- 1 boinc boinc      8764 Oct 12 13:37 runtime_log.err
[2025-10-12 13:37:42] -rw------- 1 boinc boinc       643 Oct 12 13:37 8dXNDm999R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmksTMDm42lKcm.diag
[2025-10-12 13:37:42] -rw-r--r-- 1 boinc boinc     20944 Oct 12 13:37 stderr.txt
[2025-10-12 13:37:42] HITS file was successfully produced:
[2025-10-12 13:37:42] -rw------- 1 boinc boinc 193746712 Oct 12 13:36 shared/HITS.pool.root.1
[2025-10-12 13:37:42]  *** Contents of shared directory: ***
[2025-10-12 13:37:42] total 406640
[2025-10-12 13:37:42] -rw-r--r-- 2 boinc boinc 220666605 Oct 12 11:36 ATLAS.root_0
[2025-10-12 13:37:42] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:36 start_atlas.sh
[2025-10-12 13:37:42] -rw-r--r-- 2 boinc boinc    569678 Oct 12 11:36 input.tar.gz
[2025-10-12 13:37:42] -rw------- 1 boinc boinc 193746712 Oct 12 13:36 HITS.pool.root.1
[2025-10-12 13:37:42] -rw------- 1 boinc boinc   1382400 Oct 12 13:37 result.tar.gz
13:37:44 (111307): run_atlas exited; CPU time 28717.352957
13:37:44 (111307): called boinc_finish(0)

</stderr_txt>
]]>

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