Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:44:17 (1672): wrapper (7.7.26015): starting
09:44:17 (1672): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 09:44:17] Arguments: --nthreads 12
[2025-10-12 09:44:17] Threads: 12
[2025-10-12 09:44:17] Checking for CVMFS
[2025-10-12 09:44:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:44:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:44:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:44:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:44:18] 2.11.2.0 6893 52871 85824 151621 2 57 12442677 20275201 1 130560 0 29431426 99.955 2509064 27882 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 09:44:18] CVMFS is ok
[2025-10-12 09:44:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:44:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:44:18] Further information can be found at the LHC@home message board.
[2025-10-12 09:44:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:44:18] Checking for apptainer binary...
[2025-10-12 09:44:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:44:18] Running /usr/bin/apptainer --version
[2025-10-12 09:44:18] apptainer version 1.3.2-1.el7
[2025-10-12 09:44:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:44:19] c-205-3.aglt2.org
[2025-10-12 09:44:19] apptainer works
[2025-10-12 09:44:19] Set ATHENA_PROC_NUMBER=12
[2025-10-12 09:44:19] Set ATHENA_CORE_NUMBER=12
[2025-10-12 09:44:19] Starting ATLAS job with PandaID=6839821972
[2025-10-12 09:44:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:55:46]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:55:46]  replicas=None
[2025-10-12 10:55:46]  scope=mc23_13p6TeV
[2025-10-12 10:55:46]  status=None
[2025-10-12 10:55:46]  status_code=0
[2025-10-12 10:55:46]  storage_token=
[2025-10-12 10:55:46]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839821972/log.46676269._075293.job.log.tgz.1
[2025-10-12 10:55:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/07/log.46676269._075293.job.log.tgz.1
[2025-10-12 10:55:46]  workdir=None
[2025-10-12 10:55:46] ]
[2025-10-12 10:55:46] 2025-10-12 14:54:42,704 | INFO     | transferring file log.46676269._075293.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839821972/log.46676269._075293.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 10:55:46] 2025-10-12 14:54:42,704 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839821972/log.46676269._075293.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._075293.job
[2025-10-12 10:55:46] 2025-10-12 14:54:42,727 | INFO     | adding to output.list: log.46676269._075293.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/07/log.46676269._075293.job.log.tg
[2025-10-12 10:55:46] 2025-10-12 14:54:42,728 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 10:55:46] 2025-10-12 14:54:42,728 | INFO     | summary of transferred files:
[2025-10-12 10:55:46] 2025-10-12 14:54:42,729 | INFO     |  -- lfn=log.46676269._075293.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 10:55:46] 2025-10-12 14:54:42,729 | INFO     | stage-out finished correctly
[2025-10-12 10:55:46] 2025-10-12 14:54:43,027 | INFO     | monitor loop #314: job 0:6839821972 is in state 'finished'
[2025-10-12 10:55:46] 2025-10-12 14:54:43,027 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:55:46] 2025-10-12 14:54:43,491 | INFO     | time since job start (4209s) is within the limit (172800.0s)
[2025-10-12 10:55:46] 2025-10-12 14:54:44,683 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 10:55:46] 2025-10-12 14:54:44,769 | INFO     | job 6839821972 has state=finished
[2025-10-12 10:55:46] 2025-10-12 14:54:44,769 | INFO     | preparing for final server update for job 6839821972 in state='finished'
[2025-10-12 10:55:46] 2025-10-12 14:54:44,770 | INFO     | this job has now completed (state=finished)
[2025-10-12 10:55:46] 2025-10-12 14:54:44,770 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 10:55:46] 2025-10-12 14:54:44,770 | INFO     | log transfer has been attempted: DONE
[2025-10-12 10:55:46] 2025-10-12 14:54:44,770 | INFO     | job 6839821972 has finished - writing final server update
[2025-10-12 10:55:46] 2025-10-12 14:54:44,771 | INFO     | total number of processed events: 400 (read)
[2025-10-12 10:55:46] 2025-10-12 14:54:44,772 | INFO     | executing command: lscpu
[2025-10-12 10:55:46] 2025-10-12 14:54:44,797 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 10:55:46] 2025-10-12 14:54:45,497 | INFO     | time since job start (4211s) is within the limit (172800.0s)
[2025-10-12 10:55:46] 2025-10-12 14:54:45,530 | INFO     | monitor loop #315: job 0:6839821972 is in state 'finished'
[2025-10-12 10:55:46] 2025-10-12 14:54:45,530 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:55:46] 2025-10-12 14:54:47,503 | INFO     | time since job start (4213s) is within the limit (172800.0s)
[2025-10-12 10:55:46] 2025-10-12 14:54:48,033 | INFO     | monitor loop #316: job 0:6839821972 is in state 'finished'
[2025-10-12 10:55:46] 2025-10-12 14:54:48,034 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:55:46] 2025-10-12 14:54:49,489 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 10:55:46] 2025-10-12 14:54:49,493 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-12 10:55:46] 2025-10-12 14:54:49,495 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839821972/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 10:55:46] 2025-10-12 14:54:49,495 | INFO     | extracted standard info from prmon json
[2025-10-12 10:55:46] 2025-10-12 14:54:49,496 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:55:46] 2025-10-12 14:54:49,496 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:55:46] 2025-10-12 14:54:49,496 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:55:46] 2025-10-12 14:54:49,496 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:55:46] 2025-10-12 14:54:49,498 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:55:46] 2025-10-12 14:54:49,498 | INFO     | sum of square deviations: 73882315.5
[2025-10-12 10:55:46] 2025-10-12 14:54:49,498 | INFO     | sum of deviations: -5681086678.499998
[2025-10-12 10:55:46] 2025-10-12 14:54:49,498 | INFO     | mean x: 1760278868.5
[2025-10-12 10:55:46] 2025-10-12 14:54:49,498 | INFO     | mean y: 2741027.2419354836
[2025-10-12 10:55:46] 2025-10-12 14:54:49,498 | INFO     | -- intersect: 135357145699.09332
[2025-10-12 10:55:46] 2025-10-12 14:54:49,499 | INFO     | intersect: 135357145699.09332
[2025-10-12 10:55:46] 2025-10-12 14:54:49,499 | INFO     | chi2: 0.05178308185314735
[2025-10-12 10:55:46] 2025-10-12 14:54:49,499 | INFO     | -- intersect: 135357145699.09332
[2025-10-12 10:55:46] 2025-10-12 14:54:49,499 | INFO     | current memory leak: -76.89 B/s (using 62 data points, chi2=0.05)
[2025-10-12 10:55:46] 2025-10-12 14:54:49,499 | INFO     | could have reported an average CPU frequency of 2052 MHz (6 samples)
[2025-10-12 10:55:46] 2025-10-12 14:54:49,499 | INFO     | ..............................
[2025-10-12 10:55:46] 2025-10-12 14:54:49,499 | INFO     | . Timing measurements:
[2025-10-12 10:55:46] 2025-10-12 14:54:49,500 | INFO     | . get job = 0 s
[2025-10-12 10:55:46] 2025-10-12 14:54:49,500 | INFO     | . initial setup = 2 s
[2025-10-12 10:55:46] 2025-10-12 14:54:49,500 | INFO     | . payload setup = 7 s
[2025-10-12 10:55:46] 2025-10-12 14:54:49,500 | INFO     | . stage-in = 0 s
[2025-10-12 10:55:46] 2025-10-12 14:54:49,500 | INFO     | . payload execution = 4179 s
[2025-10-12 10:55:46] 2025-10-12 14:54:49,500 | INFO     | . stage-out = 0 s
[2025-10-12 10:55:46] 2025-10-12 14:54:49,500 | INFO     | . log creation = 0 s
[2025-10-12 10:55:46] 2025-10-12 14:54:49,500 | INFO     | ..............................
[2025-10-12 10:55:46] 2025-10-12 14:54:49,513 | INFO     | time since job start (4215s) is within the limit (172800.0s)
[2025-10-12 10:55:46] 2025-10-12 14:54:49,582 | INFO     | 
[2025-10-12 10:55:46] 2025-10-12 14:54:49,582 | INFO     | job summary report
[2025-10-12 10:55:46] 2025-10-12 14:54:49,583 | INFO     | --------------------------------------------------
[2025-10-12 10:55:46] 2025-10-12 14:54:49,583 | INFO     | PanDA job id: 6839821972
[2025-10-12 10:55:46] 2025-10-12 14:54:49,583 | INFO     | task id: 46676269
[2025-10-12 10:55:46] 2025-10-12 14:54:49,583 | INFO     | errors: (none)
[2025-10-12 10:55:46] 2025-10-12 14:54:49,583 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:55:46] 2025-10-12 14:54:49,583 | INFO     | pilot state: finished 
[2025-10-12 10:55:46] 2025-10-12 14:54:49,584 | INFO     | transexitcode: 0
[2025-10-12 10:55:46] 2025-10-12 14:54:49,584 | INFO     | exeerrorcode: 0
[2025-10-12 10:55:46] 2025-10-12 14:54:49,584 | INFO     | exeerrordiag: 
[2025-10-12 10:55:46] 2025-10-12 14:54:49,584 | INFO     | exitcode: 0
[2025-10-12 10:55:46] 2025-10-12 14:54:49,584 | INFO     | exitmsg: OK
[2025-10-12 10:55:46] 2025-10-12 14:54:49,584 | INFO     | cpuconsumptiontime: 45422 s
[2025-10-12 10:55:46] 2025-10-12 14:54:49,585 | INFO     | nevents: 400
[2025-10-12 10:55:46] 2025-10-12 14:54:49,585 | INFO     | neventsw: 0
[2025-10-12 10:55:46] 2025-10-12 14:54:49,585 | INFO     | pid: 11914
[2025-10-12 10:55:46] 2025-10-12 14:54:49,585 | INFO     | pgrp: 11914
[2025-10-12 10:55:46] 2025-10-12 14:54:49,585 | INFO     | corecount: 12
[2025-10-12 10:55:46] 2025-10-12 14:54:49,585 | INFO     | event service: False
[2025-10-12 10:55:46] 2025-10-12 14:54:49,586 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4190: 2375072, 4191: 2375071, 4192: 2384125, 4194: 2384309, 4199: 2384503}
[2025-10-12 10:55:46] 2025-10-12 14:54:49,586 | INFO     | --------------------------------------------------
[2025-10-12 10:55:46] 2025-10-12 14:54:49,586 | INFO     | 
[2025-10-12 10:55:46] 2025-10-12 14:54:49,586 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 10:55:46] 2025-10-12 14:54:49,609 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:55:46] 2025-10-12 14:54:49,610 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:55:46] 2025-10-12 14:54:49,610 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:55:46] 2025-10-12 14:54:49,610 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:55:46] 2025-10-12 14:54:49,610 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:55:46] 2025-10-12 14:54:49,611 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:55:46] 2025-10-12 14:54:49,611 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:55:46] 2025-10-12 14:54:49,611 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:55:46] 2025-10-12 14:54:49,611 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:55:46] 2025-10-12 14:54:49,611 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:55:46] 2025-10-12 14:54:49,611 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:55:46] 2025-10-12 14:54:49,612 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:55:46] 2025-10-12 14:54:49,612 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:55:46] 2025-10-12 14:54:49,612 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:55:46] 2025-10-12 14:54:49,612 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:55:46] 2025-10-12 14:54:49,612 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:55:46] 2025-10-12 14:54:49,612 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:55:46] 2025-10-12 14:54:49,613 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:55:46] 2025-10-12 14:54:49,613 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:55:46] 2025-10-12 14:54:49,613 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:55:46] 2025-10-12 14:54:49,613 | INFO     | job 6839821972 has completed (purged errors)
[2025-10-12 10:55:46] 2025-10-12 14:54:49,613 | INFO     | overall cleanup function is called
[2025-10-12 10:55:46] 2025-10-12 14:54:50,620 | INFO     | --- collectZombieJob: --- 10, [11914]
[2025-10-12 10:55:46] 2025-10-12 14:54:50,621 | INFO     | zombie collector waiting for pid 11914
[2025-10-12 10:55:46] 2025-10-12 14:54:50,621 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:55:46] 2025-10-12 14:54:50,621 | INFO     | collected zombie processes
[2025-10-12 10:55:46] 2025-10-12 14:54:50,622 | INFO     | will attempt to kill all subprocesses of pid=11914
[2025-10-12 10:55:46] 2025-10-12 14:54:50,646 | INFO     | PID=5475 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 10:55:46] 2025-10-12 14:54:50,724 | INFO     | process IDs to be killed: [11914] (in reverse order)
[2025-10-12 10:55:46] 2025-10-12 14:54:50,776 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:55:46] 2025-10-12 14:54:50,776 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:55:46] 2025-10-12 14:54:50,780 | INFO     | did not find any defunct processes belonging to 11914
[2025-10-12 10:55:46] 2025-10-12 14:54:50,783 | INFO     | did not find any defunct processes belonging to 11914
[2025-10-12 10:55:46] 2025-10-12 14:54:50,783 | INFO     | ready for new job
[2025-10-12 10:55:46] 2025-10-12 14:54:50,784 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:55:46] 2025-10-12 14:54:50,785 | INFO     | ***************************************
[2025-10-12 10:55:46] 2025-10-12 14:54:50,785 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:55:46] 2025-10-12 14:54:50,785 | INFO     | ***************************************
[2025-10-12 10:55:46] 2025-10-12 14:54:50,785 | INFO     | 
[2025-10-12 10:55:46] 2025-10-12 14:54:50,786 | INFO     | architecture information:
[2025-10-12 10:55:46] 2025-10-12 14:54:50,786 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:55:46] 2025-10-12 14:54:50,800 | INFO     | cat /etc/os-release:
[2025-10-12 10:55:46] NAME="CentOS Linux"
[2025-10-12 10:55:46] VERSION="7 (Core)"
[2025-10-12 10:55:46] ID="centos"
[2025-10-12 10:55:46] ID_LIKE="rhel fedora"
[2025-10-12 10:55:46] VERSION_ID="7"
[2025-10-12 10:55:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:55:46] ANSI_COLOR="0;31"
[2025-10-12 10:55:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:55:46] HOME_URL="https://www.centos.org/"
[2025-10-12 10:55:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:55:46] 
[2025-10-12 10:55:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:55:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:55:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:55:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:55:46] 
[2025-10-12 10:55:46] 2025-10-12 14:54:50,800 | INFO     | ***************************************
[2025-10-12 10:55:46] 2025-10-12 14:54:51,303 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 10:55:46] 2025-10-12 14:54:51,320 | INFO     | sufficient remaining disk space (29501685760 B)
[2025-10-12 10:55:46] 2025-10-12 14:54:51,320 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:55:46] 2025-10-12 14:54:51,320 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:55:46] 2025-10-12 14:54:51,320 | INFO     | update_server=False
[2025-10-12 10:55:46] 2025-10-12 14:54:51,320 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:55:46] 2025-10-12 14:54:51,321 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:55:46] 2025-10-12 14:54:51,321 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:55:46] 2025-10-12 14:54:51,321 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 10:55:46] 2025-10-12 14:54:51,322 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:55:46] 2025-10-12 14:54:51,322 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:55:46] 2025-10-12 14:54:51,323 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:55:46] 2025-10-12 14:54:51,323 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:55:46] 2025-10-12 14:54:51,542 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:55:46] 2025-10-12 14:54:51,542 | INFO     | aborting loop
[2025-10-12 10:55:46] 2025-10-12 14:54:51,686 | INFO     | all payload control threads have been joined
[2025-10-12 10:55:46] 2025-10-12 14:54:51,872 | INFO     | all data control threads have been joined
[2025-10-12 10:55:46] 2025-10-12 14:54:51,994 | INFO     | all job control threads have been joined
[2025-10-12 10:55:46] 2025-10-12 14:54:52,326 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:55:46] 2025-10-12 14:54:52,327 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:55:46] 2025-10-12 14:54:52,427 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:55:46] 2025-10-12 14:54:52,548 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:55:46] 2025-10-12 14:54:52,689 | INFO     | [payload] control thread has finished
[2025-10-12 10:55:46] 2025-10-12 14:54:52,878 | INFO     | [data] control thread has finished
[2025-10-12 10:55:46] 2025-10-12 14:54:52,927 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:55:46] 2025-10-12 14:54:52,997 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:55:46] 2025-10-12 14:54:53,000 | INFO     | [job] control thread has finished
[2025-10-12 10:55:46] 2025-10-12 14:54:53,049 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:55:46] 2025-10-12 14:54:53,327 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:55:46] 2025-10-12 14:54:53,364 | INFO     | [job] validate thread has finished
[2025-10-12 10:55:46] 2025-10-12 14:54:53,444 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:55:46] 2025-10-12 14:54:53,732 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:55:46] 2025-10-12 14:54:53,753 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:55:46] 2025-10-12 14:54:55,327 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:55:46] 2025-10-12 14:55:40,639 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:55:46] 2025-10-12 14:55:41,156 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140310520731456)>', '<ExcThread(monitor, started 140309837100800)>']
[2025-10-12 10:55:46] 2025-10-12 14:55:41,562 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:55:46] 2025-10-12 14:55:41,562 | INFO     | [monitor] control thread has ended
[2025-10-12 10:55:46] 2025-10-12 14:55:46,161 | INFO     | all workflow threads have been joined
[2025-10-12 10:55:46] 2025-10-12 14:55:46,161 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:55:46] 2025-10-12 14:55:46,164 | INFO     | traces error code: 0
[2025-10-12 10:55:46] 2025-10-12 14:55:46,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:55:46] 2025-10-12 14:55:46,265 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:55:46] 2025-10-12 14:55:46,269 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:55:46] 2025-10-12 14:55:46,273 [wrapper] pilotpid: 5475
[2025-10-12 10:55:46] 2025-10-12 14:55:46,277 [wrapper] Pilot exit status: 0
[2025-10-12 10:55:46] 2025-10-12 14:55:46,291 [wrapper] pandaids: 6839821972
[2025-10-12 10:55:46] 2025-10-12 14:55:46,339 [wrapper] cleanup supervisor_pilot 31594 5476
[2025-10-12 10:55:46] 2025-10-12 14:55:46,343 [wrapper] Test setup, not cleaning
[2025-10-12 10:55:46] 2025-10-12 14:55:46,347 [wrapper] apfmon messages muted
[2025-10-12 10:55:46] 2025-10-12 14:55:46,351 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:55:46] 2025-10-12 14:55:46,356 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:55:46]  *** Error codes and diagnostics ***
[2025-10-12 10:55:46]     "exeErrorCode": 0,
[2025-10-12 10:55:46]     "exeErrorDiag": "",
[2025-10-12 10:55:46]     "pilotErrorCode": 0,
[2025-10-12 10:55:46]     "pilotErrorDiag": "",
[2025-10-12 10:55:46]  *** Listing of results directory ***
[2025-10-12 10:55:46] total 403412
[2025-10-12 10:55:46] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 05:04 pilot3.tar.gz
[2025-10-12 10:55:46] -rwx------ 1 boincer umatlas     36292 Oct 12 05:30 runpilot2-wrapper.sh
[2025-10-12 10:55:46] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 05:30 queuedata.json
[2025-10-12 10:55:46] -rw-r--r-- 1 boincer umatlas       100 Oct 12 09:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:55:46] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 09:44 run_atlas
[2025-10-12 10:55:46] -rw-r--r-- 1 boincer umatlas       105 Oct 12 09:44 job.xml
[2025-10-12 10:55:46] -rw-r--r-- 2 boincer umatlas 218091300 Oct 12 09:44 EVNT.46676267._003572.pool.root.1
[2025-10-12 10:55:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:44 start_atlas.sh
[2025-10-12 10:55:46] drwxrwx--x 2 boincer umatlas      4096 Oct 12 09:44 shared
[2025-10-12 10:55:46] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 09:44 input.tar.gz
[2025-10-12 10:55:46] -rw-r--r-- 1 boincer umatlas         0 Oct 12 09:44 boinc_lockfile
[2025-10-12 10:55:46] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 09:44 pandaJob.out
[2025-10-12 10:55:46] -rw------- 1 boincer umatlas    975528 Oct 12 09:44 agis_schedconf.cvmfs.json
[2025-10-12 10:55:46] -rw------- 1 boincer umatlas   1560580 Oct 12 09:44 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:55:46] drwx------ 5 boincer umatlas      4096 Oct 12 09:44 pilot3
[2025-10-12 10:55:46] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 10:49 init_data.xml
[2025-10-12 10:55:46] -rw------- 1 boincer umatlas 189114253 Oct 12 10:54 HITS.46676269._075293.pool.root.1
[2025-10-12 10:55:46] -rw-r--r-- 1 boincer umatlas       530 Oct 12 10:54 boinc_task_state.xml
[2025-10-12 10:55:46] -rw------- 1 boincer umatlas        95 Oct 12 10:54 pilot_heartbeat.json
[2025-10-12 10:55:46] -rw------- 1 boincer umatlas      1062 Oct 12 10:54 memory_monitor_summary.json
[2025-10-12 10:55:46] -rw------- 1 boincer umatlas    374675 Oct 12 10:54 log.46676269._075293.job.log.tgz.1
[2025-10-12 10:55:46] -rw------- 1 boincer umatlas      7853 Oct 12 10:54 heartbeat.json
[2025-10-12 10:55:46] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 10:55 boinc_mmap_file
[2025-10-12 10:55:46] -rw-r--r-- 1 boincer umatlas        27 Oct 12 10:55 wrapper_checkpoint.txt
[2025-10-12 10:55:46] -rw------- 1 boincer umatlas      4552 Oct 12 10:55 pilotlog.txt
[2025-10-12 10:55:46] -rw------- 1 boincer umatlas    615063 Oct 12 10:55 log.46676269._075293.job.log.1
[2025-10-12 10:55:46] -rw------- 1 boincer umatlas       357 Oct 12 10:55 output.list
[2025-10-12 10:55:46] -rw-r--r-- 1 boincer umatlas       620 Oct 12 10:55 runtime_log
[2025-10-12 10:55:46] -rw------- 1 boincer umatlas   1013760 Oct 12 10:55 result.tar.gz
[2025-10-12 10:55:46] -rw------- 1 boincer umatlas       658 Oct 12 10:55 sb4MDmja7R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmfZTMDm1CdZRm.diag
[2025-10-12 10:55:46] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 10:55 runtime_log.err
[2025-10-12 10:55:46] -rw-r--r-- 1 boincer umatlas     21880 Oct 12 10:55 stderr.txt
[2025-10-12 10:55:46] HITS file was successfully produced:
[2025-10-12 10:55:46] -rw------- 1 boincer umatlas 189114253 Oct 12 10:54 shared/HITS.pool.root.1
[2025-10-12 10:55:46]  *** Contents of shared directory: ***
[2025-10-12 10:55:46] total 399236
[2025-10-12 10:55:46] -rw-r--r-- 2 boincer umatlas 218091300 Oct 12 09:44 ATLAS.root_0
[2025-10-12 10:55:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:44 start_atlas.sh
[2025-10-12 10:55:46] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 09:44 input.tar.gz
[2025-10-12 10:55:46] -rw------- 1 boincer umatlas 189114253 Oct 12 10:54 HITS.pool.root.1
[2025-10-12 10:55:46] -rw------- 1 boincer umatlas   1013760 Oct 12 10:55 result.tar.gz
10:55:47 (1672): run_atlas exited; CPU time 45398.977038
10:55:47 (1672): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN