Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:40:35 (7978): wrapper (7.7.26015): starting
09:40:35 (7978): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 09:40:35] Arguments: --nthreads 8
[2025-10-12 09:40:35] Threads: 8
[2025-10-12 09:40:35] Checking for CVMFS
[2025-10-12 09:40:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:40:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:40:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:40:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:40:35] 2.11.2.0 23418 11737 105288 151621 0 57 13845981 18432001 1833 130560 0 17350941 99.996 389525 34863 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 09:40:35] CVMFS is ok
[2025-10-12 09:40:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:40:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:40:35] Further information can be found at the LHC@home message board.
[2025-10-12 09:40:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:40:35] Checking for apptainer binary...
[2025-10-12 09:40:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:40:35] Running /usr/bin/apptainer --version
[2025-10-12 09:40:35] apptainer version 1.3.2-1.el7
[2025-10-12 09:40:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:40:36] c-206-24.aglt2.org
[2025-10-12 09:40:36] apptainer works
[2025-10-12 09:40:36] Set ATHENA_PROC_NUMBER=8
[2025-10-12 09:40:36] Set ATHENA_CORE_NUMBER=8
[2025-10-12 09:40:36] Starting ATLAS job with PandaID=6839865858
[2025-10-12 09:40:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:52:11]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:52:11] 2025-10-12 16:51:26,516 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6839865858/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:52:11] 2025-10-12 16:51:26,516 | INFO     | extracted standard info from prmon json
[2025-10-12 12:52:11] 2025-10-12 16:51:26,516 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:52:11] 2025-10-12 16:51:26,517 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:52:11] 2025-10-12 16:51:26,517 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:52:11] 2025-10-12 16:51:26,517 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:52:11] 2025-10-12 16:51:26,520 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:52:11] 2025-10-12 16:51:26,520 | INFO     | sum of square deviations: 2027639878.0
[2025-10-12 12:52:11] 2025-10-12 16:51:26,521 | INFO     | sum of deviations: 17213948741.0
[2025-10-12 12:52:11] 2025-10-12 16:51:26,521 | INFO     | mean x: 1760282143.0
[2025-10-12 12:52:11] 2025-10-12 16:51:26,521 | INFO     | mean y: 2484974.080213904
[2025-10-12 12:52:11] 2025-10-12 16:51:26,521 | INFO     | -- intersect: -14941690719.084782
[2025-10-12 12:52:11] 2025-10-12 16:51:26,522 | INFO     | intersect: -14941690719.084782
[2025-10-12 12:52:11] 2025-10-12 16:51:26,522 | INFO     | chi2: 1.2083295117730535
[2025-10-12 12:52:11] 2025-10-12 16:51:26,522 | INFO     | sum of square deviations: 1869302025.5
[2025-10-12 12:52:11] 2025-10-12 16:51:26,523 | INFO     | sum of deviations: 16739894896.500002
[2025-10-12 12:52:11] 2025-10-12 16:51:26,523 | INFO     | mean x: 1760281990.5
[2025-10-12 12:52:11] 2025-10-12 16:51:26,523 | INFO     | mean y: 2484517.3791208793
[2025-10-12 12:52:11] 2025-10-12 16:51:26,523 | INFO     | -- intersect: -15761118745.870974
[2025-10-12 12:52:11] 2025-10-12 16:51:26,523 | INFO     | intersect: -15761118745.870974
[2025-10-12 12:52:11] 2025-10-12 16:51:26,524 | INFO     | chi2: 1.2091207367460846
[2025-10-12 12:52:11] 2025-10-12 16:51:26,524 | INFO     | current chi2=1.2091207367460846 (change=-0.06548089451776015 %)
[2025-10-12 12:52:11] 2025-10-12 16:51:26,524 | INFO     | right removable region: 181
[2025-10-12 12:52:11] 2025-10-12 16:51:26,524 | INFO     | sum of square deviations: 1869302025.5
[2025-10-12 12:52:11] 2025-10-12 16:51:26,525 | INFO     | sum of deviations: -5967271258.999999
[2025-10-12 12:52:11] 2025-10-12 16:51:26,525 | INFO     | mean x: 1760282295.5
[2025-10-12 12:52:11] 2025-10-12 16:51:26,525 | INFO     | mean y: 2506997.5054945056
[2025-10-12 12:52:11] 2025-10-12 16:51:26,525 | INFO     | -- intersect: 5621760497.6743965
[2025-10-12 12:52:11] 2025-10-12 16:51:26,525 | INFO     | intersect: 5621760497.6743965
[2025-10-12 12:52:11] 2025-10-12 16:51:26,526 | INFO     | chi2: 0.028656846205528906
[2025-10-12 12:52:11] 2025-10-12 16:51:26,526 | INFO     | current chi2=0.028656846205528906 (change=97.62839143409822 %)
[2025-10-12 12:52:11] 2025-10-12 16:51:26,526 | INFO     | sum of square deviations: 1719429448.0
[2025-10-12 12:52:11] 2025-10-12 16:51:26,527 | INFO     | sum of deviations: -4746943445.0
[2025-10-12 12:52:11] 2025-10-12 16:51:26,527 | INFO     | mean x: 1760282448.0
[2025-10-12 12:52:11] 2025-10-12 16:51:26,527 | INFO     | mean y: 2505741.9943502825
[2025-10-12 12:52:11] 2025-10-12 16:51:26,527 | INFO     | -- intersect: 4862234786.184917
[2025-10-12 12:52:11] 2025-10-12 16:51:26,527 | INFO     | intersect: 4862234786.184917
[2025-10-12 12:52:11] 2025-10-12 16:51:26,528 | INFO     | chi2: 0.027091974372386533
[2025-10-12 12:52:11] 2025-10-12 16:51:26,528 | INFO     | current chi2=0.027091974372386533 (change=5.460725935851431 %)
[2025-10-12 12:52:11] 2025-10-12 16:51:26,528 | INFO     | left removable region: 20
[2025-10-12 12:52:11] 2025-10-12 16:51:26,528 | INFO     | sum of square deviations: 1294014960.0
[2025-10-12 12:52:11] 2025-10-12 16:51:26,529 | INFO     | sum of deviations: 632971928.9999992
[2025-10-12 12:52:11] 2025-10-12 16:51:26,529 | INFO     | mean x: 1760282570.0
[2025-10-12 12:52:11] 2025-10-12 16:51:26,529 | INFO     | mean y: 2499611.5900621116
[2025-10-12 12:52:11] 2025-10-12 16:51:26,529 | INFO     | -- intersect: -858548744.3871949
[2025-10-12 12:52:11] 2025-10-12 16:51:26,529 | INFO     | intersect: -858548744.3871949
[2025-10-12 12:52:11] 2025-10-12 16:51:26,529 | INFO     | chi2: 0.011803471632717435
[2025-10-12 12:52:11] 2025-10-12 16:51:26,530 | INFO     | -- intersect: -858548744.3871949
[2025-10-12 12:52:11] 2025-10-12 16:51:26,530 | INFO     | current memory leak: 0.49 B/s (using 161 data points, chi2=0.01)
[2025-10-12 12:52:11] 2025-10-12 16:51:26,530 | INFO     | could have reported an average CPU frequency of 2485 MHz (10 samples)
[2025-10-12 12:52:11] 2025-10-12 16:51:26,530 | INFO     | ..............................
[2025-10-12 12:52:11] 2025-10-12 16:51:26,530 | INFO     | . Timing measurements:
[2025-10-12 12:52:11] 2025-10-12 16:51:26,530 | INFO     | . get job = 0 s
[2025-10-12 12:52:11] 2025-10-12 16:51:26,530 | INFO     | . initial setup = 2 s
[2025-10-12 12:52:11] 2025-10-12 16:51:26,531 | INFO     | . payload setup = 4 s
[2025-10-12 12:52:11] 2025-10-12 16:51:26,531 | INFO     | . stage-in = 0 s
[2025-10-12 12:52:11] 2025-10-12 16:51:26,531 | INFO     | . payload execution = 11406 s
[2025-10-12 12:52:11] 2025-10-12 16:51:26,531 | INFO     | . stage-out = 2 s
[2025-10-12 12:52:11] 2025-10-12 16:51:26,531 | INFO     | . log creation = 0 s
[2025-10-12 12:52:11] 2025-10-12 16:51:26,531 | INFO     | ..............................
[2025-10-12 12:52:11] 2025-10-12 16:51:26,635 | INFO     | time since job start (11440s) is within the limit (172800.0s)
[2025-10-12 12:52:11] 2025-10-12 16:51:26,701 | INFO     | 
[2025-10-12 12:52:11] 2025-10-12 16:51:26,701 | INFO     | job summary report
[2025-10-12 12:52:11] 2025-10-12 16:51:26,701 | INFO     | --------------------------------------------------
[2025-10-12 12:52:11] 2025-10-12 16:51:26,701 | INFO     | PanDA job id: 6839865858
[2025-10-12 12:52:11] 2025-10-12 16:51:26,701 | INFO     | task id: 46676269
[2025-10-12 12:52:11] 2025-10-12 16:51:26,702 | INFO     | errors: (none)
[2025-10-12 12:52:11] 2025-10-12 16:51:26,702 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:52:11] 2025-10-12 16:51:26,702 | INFO     | pilot state: finished 
[2025-10-12 12:52:11] 2025-10-12 16:51:26,702 | INFO     | transexitcode: 0
[2025-10-12 12:52:11] 2025-10-12 16:51:26,702 | INFO     | exeerrorcode: 0
[2025-10-12 12:52:11] 2025-10-12 16:51:26,702 | INFO     | exeerrordiag: 
[2025-10-12 12:52:11] 2025-10-12 16:51:26,702 | INFO     | exitcode: 0
[2025-10-12 12:52:11] 2025-10-12 16:51:26,702 | INFO     | exitmsg: OK
[2025-10-12 12:52:11] 2025-10-12 16:51:26,702 | INFO     | cpuconsumptiontime: 86574 s
[2025-10-12 12:52:11] 2025-10-12 16:51:26,702 | INFO     | nevents: 400
[2025-10-12 12:52:11] 2025-10-12 16:51:26,703 | INFO     | neventsw: 0
[2025-10-12 12:52:11] 2025-10-12 16:51:26,703 | INFO     | pid: 18081
[2025-10-12 12:52:11] 2025-10-12 16:51:26,703 | INFO     | pgrp: 18081
[2025-10-12 12:52:11] 2025-10-12 16:51:26,703 | INFO     | corecount: 8
[2025-10-12 12:52:11] 2025-10-12 16:51:26,703 | INFO     | event service: False
[2025-10-12 12:52:11] 2025-10-12 16:51:26,703 | INFO     | sizes: {0: 2348686, 1: 2348885, 4: 2349147, 11: 2349175, 11415: 2378589, 11418: 2387587, 11421: 2387771, 11426: 2387965}
[2025-10-12 12:52:11] 2025-10-12 16:51:26,703 | INFO     | --------------------------------------------------
[2025-10-12 12:52:11] 2025-10-12 16:51:26,703 | INFO     | 
[2025-10-12 12:52:11] 2025-10-12 16:51:26,703 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 12:52:11] 2025-10-12 16:51:26,718 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:52:11] 2025-10-12 16:51:26,719 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:52:11] 2025-10-12 16:51:26,719 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:52:11] 2025-10-12 16:51:26,719 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:52:11] 2025-10-12 16:51:26,719 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:52:11] 2025-10-12 16:51:26,719 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:52:11] 2025-10-12 16:51:26,719 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:52:11] 2025-10-12 16:51:26,719 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:52:11] 2025-10-12 16:51:26,719 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:52:11] 2025-10-12 16:51:26,719 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:52:11] 2025-10-12 16:51:26,719 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:52:11] 2025-10-12 16:51:26,720 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:52:11] 2025-10-12 16:51:26,720 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:52:11] 2025-10-12 16:51:26,720 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:52:11] 2025-10-12 16:51:26,720 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:52:11] 2025-10-12 16:51:26,720 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:52:11] 2025-10-12 16:51:26,720 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:52:11] 2025-10-12 16:51:26,720 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:52:11] 2025-10-12 16:51:26,720 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:52:11] 2025-10-12 16:51:26,720 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:52:11] 2025-10-12 16:51:26,721 | INFO     | job 6839865858 has completed (purged errors)
[2025-10-12 12:52:11] 2025-10-12 16:51:26,721 | INFO     | overall cleanup function is called
[2025-10-12 12:52:11] 2025-10-12 16:51:27,728 | INFO     | --- collectZombieJob: --- 10, [18081]
[2025-10-12 12:52:11] 2025-10-12 16:51:27,728 | INFO     | zombie collector waiting for pid 18081
[2025-10-12 12:52:11] 2025-10-12 16:51:27,729 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:52:11] 2025-10-12 16:51:27,729 | INFO     | collected zombie processes
[2025-10-12 12:52:11] 2025-10-12 16:51:27,731 | INFO     | will attempt to kill all subprocesses of pid=18081
[2025-10-12 12:52:11] 2025-10-12 16:51:27,822 | INFO     | PID=11658 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 12:52:11] 2025-10-12 16:51:27,823 | INFO     | .. there are 3 such processes running
[2025-10-12 12:52:11] 2025-10-12 16:51:27,889 | INFO     | process IDs to be killed: [18081] (in reverse order)
[2025-10-12 12:52:11] 2025-10-12 16:51:27,927 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:52:11] 2025-10-12 16:51:27,928 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:52:11] 2025-10-12 16:51:27,930 | INFO     | did not find any defunct processes belonging to 18081
[2025-10-12 12:52:11] 2025-10-12 16:51:27,933 | INFO     | did not find any defunct processes belonging to 18081
[2025-10-12 12:52:11] 2025-10-12 16:51:27,933 | INFO     | ready for new job
[2025-10-12 12:52:11] 2025-10-12 16:51:27,933 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:52:11] 2025-10-12 16:51:27,935 | INFO     | ***************************************
[2025-10-12 12:52:11] 2025-10-12 16:51:27,935 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:52:11] 2025-10-12 16:51:27,935 | INFO     | ***************************************
[2025-10-12 12:52:11] 2025-10-12 16:51:27,935 | INFO     | 
[2025-10-12 12:52:11] 2025-10-12 16:51:27,936 | INFO     | architecture information:
[2025-10-12 12:52:11] 2025-10-12 16:51:27,936 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:52:11] 2025-10-12 16:51:27,947 | INFO     | cat /etc/os-release:
[2025-10-12 12:52:11] NAME="CentOS Linux"
[2025-10-12 12:52:11] VERSION="7 (Core)"
[2025-10-12 12:52:11] ID="centos"
[2025-10-12 12:52:11] ID_LIKE="rhel fedora"
[2025-10-12 12:52:11] VERSION_ID="7"
[2025-10-12 12:52:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:52:11] ANSI_COLOR="0;31"
[2025-10-12 12:52:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:52:11] HOME_URL="https://www.centos.org/"
[2025-10-12 12:52:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:52:11] 
[2025-10-12 12:52:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:52:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:52:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:52:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:52:11] 
[2025-10-12 12:52:11] 2025-10-12 16:51:27,948 | INFO     | ***************************************
[2025-10-12 12:52:11] 2025-10-12 16:51:28,450 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 12:52:11] 2025-10-12 16:51:28,477 | INFO     | sufficient remaining disk space (27916238848 B)
[2025-10-12 12:52:11] 2025-10-12 16:51:28,477 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:52:11] 2025-10-12 16:51:28,477 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:52:11] 2025-10-12 16:51:28,478 | INFO     | update_server=False
[2025-10-12 12:52:11] 2025-10-12 16:51:28,478 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:52:11] 2025-10-12 16:51:28,478 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:52:11] 2025-10-12 16:51:28,478 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 12:52:11] 2025-10-12 16:51:28,479 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:52:11] 2025-10-12 16:51:28,479 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:52:11] 2025-10-12 16:51:28,479 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:52:11] 2025-10-12 16:51:28,479 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:52:11] 2025-10-12 16:51:28,582 | INFO     | all job control threads have been joined
[2025-10-12 12:52:11] 2025-10-12 16:51:28,728 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 12:52:11] 2025-10-12 16:51:28,728 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 12:52:11] 2025-10-12 16:51:28,728 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:52:11] 2025-10-12 16:51:28,728 | INFO     | will abort loop
[2025-10-12 12:52:11] 2025-10-12 16:51:29,149 | INFO     | all data control threads have been joined
[2025-10-12 12:52:11] 2025-10-12 16:51:29,322 | INFO     | all payload control threads have been joined
[2025-10-12 12:52:11] 2025-10-12 16:51:29,483 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:52:11] 2025-10-12 16:51:29,484 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:52:11] 2025-10-12 16:51:29,518 | INFO     | [job] validate thread has finished
[2025-10-12 12:52:11] 2025-10-12 16:51:29,519 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:52:11] 2025-10-12 16:51:29,587 | INFO     | [job] control thread has finished
[2025-10-12 12:52:11] 2025-10-12 16:51:29,733 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:52:11] 2025-10-12 16:51:29,875 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:52:11] 2025-10-12 16:51:29,900 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:52:11] 2025-10-12 16:51:30,154 | INFO     | [data] control thread has finished
[2025-10-12 12:52:11] 2025-10-12 16:51:30,192 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:52:11] 2025-10-12 16:51:30,327 | INFO     | [payload] control thread has finished
[2025-10-12 12:52:11] 2025-10-12 16:51:30,463 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:52:11] 2025-10-12 16:51:30,693 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:52:11] 2025-10-12 16:51:31,081 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:52:11] 2025-10-12 16:51:31,881 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:52:11] 2025-10-12 16:51:32,485 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:52:11] 2025-10-12 16:51:38,705 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:52:11] 2025-10-12 16:51:39,710 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:52:11] 2025-10-12 16:52:05,162 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:52:11] 2025-10-12 16:52:05,868 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140631453648704)>', '<ExcThread(monitor, started 140631137556224)>']
[2025-10-12 12:52:11] 2025-10-12 16:52:06,646 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:52:11] 2025-10-12 16:52:06,646 | INFO     | [monitor] control thread has ended
[2025-10-12 12:52:11] 2025-10-12 16:52:10,893 | INFO     | all workflow threads have been joined
[2025-10-12 12:52:11] 2025-10-12 16:52:10,893 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:52:11] 2025-10-12 16:52:10,894 | INFO     | traces error code: 0
[2025-10-12 12:52:11] 2025-10-12 16:52:10,894 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:52:11] 2025-10-12 16:52:10,997 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:52:11] 2025-10-12 16:52:10,999 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:52:11] 2025-10-12 16:52:11,001 [wrapper] pilotpid: 11658
[2025-10-12 12:52:11] 2025-10-12 16:52:11,003 [wrapper] Pilot exit status: 0
[2025-10-12 12:52:11] 2025-10-12 16:52:11,010 [wrapper] pandaids: 6839865858
[2025-10-12 12:52:11] 2025-10-12 16:52:11,038 [wrapper] cleanup supervisor_pilot 32616 11659
[2025-10-12 12:52:11] 2025-10-12 16:52:11,040 [wrapper] Test setup, not cleaning
[2025-10-12 12:52:11] 2025-10-12 16:52:11,042 [wrapper] apfmon messages muted
[2025-10-12 12:52:11] 2025-10-12 16:52:11,043 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:52:11] 2025-10-12 16:52:11,045 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:52:11]  *** Error codes and diagnostics ***
[2025-10-12 12:52:11]     "exeErrorCode": 0,
[2025-10-12 12:52:11]     "exeErrorDiag": "",
[2025-10-12 12:52:11]     "pilotErrorCode": 0,
[2025-10-12 12:52:11]     "pilotErrorDiag": "",
[2025-10-12 12:52:11]  *** Listing of results directory ***
[2025-10-12 12:52:11] total 418236
[2025-10-12 12:52:11] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 05:51 pilot3.tar.gz
[2025-10-12 12:52:11] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 05:55 queuedata.json
[2025-10-12 12:52:11] -rwx------ 1 boincer umatlas     36292 Oct 12 05:57 runpilot2-wrapper.sh
[2025-10-12 12:52:11] -rw-r--r-- 1 boincer umatlas       100 Oct 12 09:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:52:11] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 09:40 run_atlas
[2025-10-12 12:52:11] -rw-r--r-- 1 boincer umatlas       105 Oct 12 09:40 job.xml
[2025-10-12 12:52:11] -rw-r--r-- 2 boincer umatlas 224038172 Oct 12 09:40 EVNT.46676267._003598.pool.root.1
[2025-10-12 12:52:11] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:40 start_atlas.sh
[2025-10-12 12:52:11] drwxrwx--x 2 boincer umatlas      4096 Oct 12 09:40 shared
[2025-10-12 12:52:11] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 09:40 input.tar.gz
[2025-10-12 12:52:11] -rw-r--r-- 1 boincer umatlas         0 Oct 12 09:40 boinc_lockfile
[2025-10-12 12:52:11] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 09:40 pandaJob.out
[2025-10-12 12:52:11] -rw------- 1 boincer umatlas    975528 Oct 12 09:40 agis_schedconf.cvmfs.json
[2025-10-12 12:52:11] drwx------ 5 boincer umatlas      4096 Oct 12 09:40 pilot3
[2025-10-12 12:52:11] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 12:47 init_data.xml
[2025-10-12 12:52:11] -rw------- 1 boincer umatlas 196297014 Oct 12 12:50 HITS.46676269._075593.pool.root.1
[2025-10-12 12:52:11] -rw------- 1 boincer umatlas        95 Oct 12 12:50 pilot_heartbeat.json
[2025-10-12 12:52:11] -rw------- 1 boincer umatlas      1054 Oct 12 12:51 memory_monitor_summary.json
[2025-10-12 12:52:11] -rw------- 1 boincer umatlas   1560580 Oct 12 12:51 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:52:11] -rw------- 1 boincer umatlas    414462 Oct 12 12:51 log.46676269._075593.job.log.tgz.1
[2025-10-12 12:52:11] -rw-r--r-- 1 boincer umatlas       530 Oct 12 12:51 boinc_task_state.xml
[2025-10-12 12:52:11] -rw------- 1 boincer umatlas      7858 Oct 12 12:51 heartbeat.json
[2025-10-12 12:52:11] -rw-r--r-- 1 boincer umatlas        28 Oct 12 12:51 wrapper_checkpoint.txt
[2025-10-12 12:52:11] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 12:51 boinc_mmap_file
[2025-10-12 12:52:11] -rw------- 1 boincer umatlas      4810 Oct 12 12:52 pilotlog.txt
[2025-10-12 12:52:11] -rw------- 1 boincer umatlas   1599661 Oct 12 12:52 log.46676269._075593.job.log.1
[2025-10-12 12:52:11] -rw------- 1 boincer umatlas       357 Oct 12 12:52 output.list
[2025-10-12 12:52:11] -rw-r--r-- 1 boincer umatlas       620 Oct 12 12:52 runtime_log
[2025-10-12 12:52:11] -rw------- 1 boincer umatlas   2037760 Oct 12 12:52 result.tar.gz
[2025-10-12 12:52:11] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 12:52 runtime_log.err
[2025-10-12 12:52:11] -rw------- 1 boincer umatlas       662 Oct 12 12:52 4qCLDme07R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHOjNDmT6inXm.diag
[2025-10-12 12:52:11] -rw-r--r-- 1 boincer umatlas     21101 Oct 12 12:52 stderr.txt
[2025-10-12 12:52:11] HITS file was successfully produced:
[2025-10-12 12:52:11] -rw------- 1 boincer umatlas 196297014 Oct 12 12:50 shared/HITS.pool.root.1
[2025-10-12 12:52:11]  *** Contents of shared directory: ***
[2025-10-12 12:52:11] total 413060
[2025-10-12 12:52:11] -rw-r--r-- 2 boincer umatlas 224038172 Oct 12 09:40 ATLAS.root_0
[2025-10-12 12:52:11] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:40 start_atlas.sh
[2025-10-12 12:52:11] -rw-r--r-- 2 boincer umatlas    569681 Oct 12 09:40 input.tar.gz
[2025-10-12 12:52:11] -rw------- 1 boincer umatlas 196297014 Oct 12 12:50 HITS.pool.root.1
[2025-10-12 12:52:11] -rw------- 1 boincer umatlas   2037760 Oct 12 12:52 result.tar.gz
12:52:12 (7978): run_atlas exited; CPU time 86706.881935
12:52:12 (7978): called boinc_finish(0)

</stderr_txt>
]]>

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