Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:30:35 (2930114): wrapper (7.7.26015): starting
01:30:35 (2930114): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 01:30:35] Arguments: --nthreads 3
[2025-10-13 01:30:35] Threads: 3
[2025-10-13 01:30:35] Checking for CVMFS
[2025-10-13 01:30:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 01:30:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 01:30:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 01:30:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 01:30:36] 2.9.2.0 1455317 5048 67132 151641 0 56 30172313 36864000 0 130560 0 3869374 99.991 170558 1002 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 01:30:36] CVMFS is ok
[2025-10-13 01:30:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 01:30:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 01:30:36] Further information can be found at the LHC@home message board.
[2025-10-13 01:30:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 01:30:36] Checking for apptainer binary...
[2025-10-13 01:30:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 01:30:36] Running /usr/bin/apptainer --version
[2025-10-13 01:30:36] apptainer version 1.4.1-1.1
[2025-10-13 01:30:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 01:30:36] magicA252a
[2025-10-13 01:30:36] apptainer works
[2025-10-13 01:30:36] Set ATHENA_PROC_NUMBER=3
[2025-10-13 01:30:36] Set ATHENA_CORE_NUMBER=3
[2025-10-13 01:30:36] Starting ATLAS job with PandaID=6839928344
[2025-10-13 01:30:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:02:02]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:02:02] 2025-10-13 01:01:17,968 | INFO     | [payload] control thread has finished
[2025-10-13 03:02:02] 2025-10-13 01:01:18,069 | INFO     | [data] control thread has finished
[2025-10-13 03:02:02] 2025-10-13 01:01:18,069 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:02:02] 2025-10-13 01:01:18,102 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:02:02] 2025-10-13 01:01:18,138 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:02:02] 2025-10-13 01:01:18,184 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:02:02] 2025-10-13 01:01:18,239 | INFO     | [job] validate thread has finished
[2025-10-13 03:02:02] 2025-10-13 01:01:18,386 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:02:02] 2025-10-13 01:01:18,606 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:02:02] 2025-10-13 01:01:22,109 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:02:02] 2025-10-13 01:01:26,190 | INFO     | job.realtimelogging is not enabled
[2025-10-13 03:02:02] 2025-10-13 01:01:27,196 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:02:02] 2025-10-13 01:01:45,039 | INFO     | 5427s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 03:02:02] 2025-10-13 01:01:46,088 | INFO     | PID=2933840 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:02:02] 2025-10-13 01:01:46,088 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:02:02] 2025-10-13 01:01:46,089 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:02:02] 2025-10-13 01:01:46,089 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:02:02] 2025-10-13 01:01:56,662 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:02:02] 2025-10-13 01:01:56,767 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139911345166144)>', '<ExcThread(monitor, started 139910606468864)>']
[2025-10-13 03:02:02] 2025-10-13 01:01:57,146 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:02:02] 2025-10-13 01:01:57,147 | INFO     | [monitor] control thread has ended
[2025-10-13 03:02:02] 2025-10-13 01:02:01,793 | INFO     | all workflow threads have been joined
[2025-10-13 03:02:02] 2025-10-13 01:02:01,793 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:02:02] 2025-10-13 01:02:01,794 | INFO     | traces error code: 0
[2025-10-13 03:02:02] 2025-10-13 01:02:01,794 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:02:02] 2025-10-13 01:02:01,842 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:02:02] 2025-10-13 01:02:01,845 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:02:02] 2025-10-13 01:02:01,848 [wrapper] pilotpid: 2933840
[2025-10-13 03:02:02] 2025-10-13 01:02:01,850 [wrapper] Pilot exit status: 0
[2025-10-13 03:02:02] 2025-10-13 01:02:01,857 [wrapper] pandaids: 6839928344
[2025-10-13 03:02:02] 2025-10-13 01:02:01,875 [wrapper] cleanup supervisor_pilot 2952627 2933841
[2025-10-13 03:02:02] 2025-10-13 01:02:01,878 [wrapper] Test setup, not cleaning
[2025-10-13 03:02:02] 2025-10-13 01:02:01,881 [wrapper] apfmon messages muted
[2025-10-13 03:02:02] 2025-10-13 01:02:01,883 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:02:02] 2025-10-13 01:02:01,886 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:02:02]  *** Error codes and diagnostics ***
[2025-10-13 03:02:02]     "exeErrorCode": 0,
[2025-10-13 03:02:02]     "exeErrorDiag": "",
[2025-10-13 03:02:02]     "pilotErrorCode": 0,
[2025-10-13 03:02:02]     "pilotErrorDiag": "",
[2025-10-13 03:02:02]  *** Listing of results directory ***
[2025-10-13 03:02:02] total 415380
[2025-10-13 03:02:02] -rw-r--r-- 1 boinc boinc    557409 Oct 12 14:10 pilot3.tar.gz
[2025-10-13 03:02:02] -rwx------ 1 boinc boinc     36292 Oct 12 14:12 runpilot2-wrapper.sh
[2025-10-13 03:02:02] -rw-r--r-- 1 boinc boinc      5112 Oct 12 14:12 queuedata.json
[2025-10-13 03:02:02] -rw-r--r-- 1 boinc boinc       100 Oct 13 01:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:02:02] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 01:30 run_atlas
[2025-10-13 03:02:02] -rw-r--r-- 1 boinc boinc       105 Oct 13 01:30 job.xml
[2025-10-13 03:02:02] -rw-r--r-- 2 boinc boinc 222574784 Oct 13 01:30 EVNT.46676267._003732.pool.root.1
[2025-10-13 03:02:02] -rw-r--r-- 2 boinc boinc    569680 Oct 13 01:30 input.tar.gz
[2025-10-13 03:02:02] -rw-r--r-- 2 boinc boinc     15120 Oct 13 01:30 start_atlas.sh
[2025-10-13 03:02:02] drwxrwx--x 2 boinc boinc      4096 Oct 13 01:30 shared
[2025-10-13 03:02:02] -rw-r--r-- 1 boinc boinc         0 Oct 13 01:30 boinc_setup_complete
[2025-10-13 03:02:02] -rw-r--r-- 1 boinc boinc      6200 Oct 13 01:30 init_data.xml
[2025-10-13 03:02:02] -rw-r--r-- 1 boinc boinc         0 Oct 13 01:30 boinc_lockfile
[2025-10-13 03:02:02] -rw-r--r-- 1 boinc boinc      2550 Oct 13 01:30 pandaJob.out
[2025-10-13 03:02:02] -rw------- 1 boinc boinc    975603 Oct 13 01:30 agis_schedconf.cvmfs.json
[2025-10-13 03:02:02] -rw------- 1 boinc boinc   1560580 Oct 13 01:30 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:02:02] drwx------ 5 boinc boinc      4096 Oct 13 01:30 pilot3
[2025-10-13 03:02:02] -rw------- 1 boinc boinc 196792596 Oct 13 03:00 HITS.46676269._077783.pool.root.1
[2025-10-13 03:02:02] -rw-r--r-- 1 boinc boinc       529 Oct 13 03:00 boinc_task_state.xml
[2025-10-13 03:02:02] -rw------- 1 boinc boinc      1023 Oct 13 03:00 memory_monitor_summary.json
[2025-10-13 03:02:02] -rw------- 1 boinc boinc    252065 Oct 13 03:01 log.46676269._077783.job.log.tgz.1
[2025-10-13 03:02:02] -rw------- 1 boinc boinc        95 Oct 13 03:01 pilot_heartbeat.json
[2025-10-13 03:02:02] -rw------- 1 boinc boinc      7774 Oct 13 03:01 heartbeat.json
[2025-10-13 03:02:02] -rw-r--r-- 1 boinc boinc        27 Oct 13 03:01 wrapper_checkpoint.txt
[2025-10-13 03:02:02] -rw-r--r-- 1 boinc boinc      8192 Oct 13 03:01 boinc_mmap_file
[2025-10-13 03:02:02] -rw------- 1 boinc boinc      4939 Oct 13 03:02 pilotlog.txt
[2025-10-13 03:02:02] -rw------- 1 boinc boinc    790959 Oct 13 03:02 log.46676269._077783.job.log.1
[2025-10-13 03:02:02] -rw------- 1 boinc boinc       357 Oct 13 03:02 output.list
[2025-10-13 03:02:02] -rw-r--r-- 1 boinc boinc       620 Oct 13 03:02 runtime_log
[2025-10-13 03:02:02] -rw------- 1 boinc boinc   1064960 Oct 13 03:02 result.tar.gz
[2025-10-13 03:02:02] -rw-r--r-- 1 boinc boinc      8797 Oct 13 03:02 runtime_log.err
[2025-10-13 03:02:02] -rw------- 1 boinc boinc       662 Oct 13 03:02 b5XLDm169R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmhrTMDmKyTYJo.diag
[2025-10-13 03:02:02] -rw-r--r-- 1 boinc boinc      6080 Oct 13 03:02 stderr.txt
[2025-10-13 03:02:02] HITS file was successfully produced:
[2025-10-13 03:02:02] -rw------- 1 boinc boinc 196792596 Oct 13 03:00 shared/HITS.pool.root.1
[2025-10-13 03:02:02]  *** Contents of shared directory: ***
[2025-10-13 03:02:02] total 411168
[2025-10-13 03:02:02] -rw-r--r-- 2 boinc boinc 222574784 Oct 13 01:30 ATLAS.root_0
[2025-10-13 03:02:02] -rw-r--r-- 2 boinc boinc    569680 Oct 13 01:30 input.tar.gz
[2025-10-13 03:02:02] -rw-r--r-- 2 boinc boinc     15120 Oct 13 01:30 start_atlas.sh
[2025-10-13 03:02:02] -rw------- 1 boinc boinc 196792596 Oct 13 03:00 HITS.pool.root.1
[2025-10-13 03:02:02] -rw------- 1 boinc boinc   1064960 Oct 13 03:02 result.tar.gz
03:02:04 (2930114): run_atlas exited; CPU time 15561.735310
03:02:04 (2930114): called boinc_finish(0)

</stderr_txt>
]]>

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