Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:03:15 (3968937): wrapper (7.7.26015): starting
10:03:15 (3968937): wrapper: running run_atlas (--nthreads 9)
[2025-10-12 10:03:16] Arguments: --nthreads 9
[2025-10-12 10:03:16] Threads: 9
[2025-10-12 10:03:16] Checking for CVMFS
[2025-10-12 10:03:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:03:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:03:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:03:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:03:18] 2.13.2.0 6179 5774 109388 151621 2 236 39330072 40960000 21700 16776704 0 15276634 99.935 2928341 40930 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 10:03:18] CVMFS is ok
[2025-10-12 10:03:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:03:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:03:18] Further information can be found at the LHC@home message board.
[2025-10-12 10:03:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:03:18] Checking for apptainer binary...
[2025-10-12 10:03:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:03:18] Running /usr/bin/apptainer --version
[2025-10-12 10:03:18] apptainer version 1.4.3-1.el9
[2025-10-12 10:03:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:03:19] c-211-33-2.aglt2.org
[2025-10-12 10:03:19] apptainer works
[2025-10-12 10:03:19] Set ATHENA_PROC_NUMBER=9
[2025-10-12 10:03:19] Set ATHENA_CORE_NUMBER=9
[2025-10-12 10:03:19] Starting ATLAS job with PandaID=6839822859
[2025-10-12 10:03:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:27:10]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:27:10] 2025-10-12 18:26:24,896 | INFO     | PID=3974067 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:27:10] 2025-10-12 18:26:24,896 | INFO     | .. there are 17 such processes running
[2025-10-12 14:27:10] 2025-10-12 18:26:25,251 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 14:27:10] 2025-10-12 18:26:25,331 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2561.768677083334
[2025-10-12 14:27:10] 2025-10-12 18:26:25,436 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839822859/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:27:10] 2025-10-12 18:26:25,438 | INFO     | extracted standard info from prmon json
[2025-10-12 14:27:10] 2025-10-12 18:26:25,438 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 14:27:10] 2025-10-12 18:26:25,438 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:27:10] 2025-10-12 18:26:25,439 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:27:10] 2025-10-12 18:26:25,447 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:27:10] 2025-10-12 18:26:25,461 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:27:10] 2025-10-12 18:26:25,462 | INFO     | sum of square deviations: 5141725125.396106
[2025-10-12 14:27:10] 2025-10-12 18:26:25,473 | INFO     | sum of deviations: 44308974000.497986
[2025-10-12 14:27:10] 2025-10-12 18:26:25,474 | INFO     | mean x: 1760285783.4627452
[2025-10-12 14:27:10] 2025-10-12 18:26:25,474 | INFO     | mean y: 2524412.631372549
[2025-10-12 14:27:10] 2025-10-12 18:26:25,474 | INFO     | -- intersect: -15166792326.541525
[2025-10-12 14:27:10] 2025-10-12 18:26:25,475 | INFO     | intersect: -15166792326.541525
[2025-10-12 14:27:10] 2025-10-12 18:26:25,483 | INFO     | chi2: 3.2901335996294616
[2025-10-12 14:27:10] 2025-10-12 18:26:25,484 | INFO     | sum of square deviations: 4845191405.743971
[2025-10-12 14:27:10] 2025-10-12 18:26:25,495 | INFO     | sum of deviations: 60779306490.03996
[2025-10-12 14:27:10] 2025-10-12 18:26:25,495 | INFO     | mean x: 1760285630.968
[2025-10-12 14:27:10] 2025-10-12 18:26:25,495 | INFO     | mean y: 2532740.88
[2025-10-12 14:27:10] 2025-10-12 18:26:25,496 | INFO     | -- intersect: -22078935443.799377
[2025-10-12 14:27:10] 2025-10-12 18:26:25,496 | INFO     | intersect: -22078935443.799377
[2025-10-12 14:27:10] 2025-10-12 18:26:25,496 | INFO     | chi2: 2.5176092793689495
[2025-10-12 14:27:10] 2025-10-12 18:26:25,496 | INFO     | current chi2=2.5176092793689495 (change=23.480028906653352 %)
[2025-10-12 14:27:10] 2025-10-12 18:26:25,497 | INFO     | right removable region: 249
[2025-10-12 14:27:10] 2025-10-12 18:26:25,497 | INFO     | sum of square deviations: 4845134736.803984
[2025-10-12 14:27:10] 2025-10-12 18:26:25,507 | INFO     | sum of deviations: -16810671842.896
[2025-10-12 14:27:10] 2025-10-12 18:26:25,508 | INFO     | mean x: 1760285935.972
[2025-10-12 14:27:10] 2025-10-12 18:26:25,508 | INFO     | mean y: 2555708.872
[2025-10-12 14:27:10] 2025-10-12 18:26:25,508 | INFO     | -- intersect: 6110041016.661387
[2025-10-12 14:27:10] 2025-10-12 18:26:25,508 | INFO     | intersect: 6110041016.661387
[2025-10-12 14:27:10] 2025-10-12 18:26:25,509 | INFO     | chi2: 0.9866385276688894
[2025-10-12 14:27:10] 2025-10-12 18:26:25,509 | INFO     | current chi2=0.9866385276688894 (change=70.01220473904144 %)
[2025-10-12 14:27:10] 2025-10-12 18:26:25,510 | INFO     | sum of square deviations: 4560187601.126544
[2025-10-12 14:27:10] 2025-10-12 18:26:25,520 | INFO     | sum of deviations: -31964816370.02041
[2025-10-12 14:27:10] 2025-10-12 18:26:25,520 | INFO     | mean x: 1760286088.477551
[2025-10-12 14:27:10] 2025-10-12 18:26:25,520 | INFO     | mean y: 2563814.6326530613
[2025-10-12 14:27:10] 2025-10-12 18:26:25,521 | INFO     | -- intersect: 12341359166.601555
[2025-10-12 14:27:10] 2025-10-12 18:26:25,521 | INFO     | intersect: 12341359166.601555
[2025-10-12 14:27:10] 2025-10-12 18:26:25,521 | INFO     | chi2: 0.8389407056969803
[2025-10-12 14:27:10] 2025-10-12 18:26:25,522 | INFO     | current chi2=0.8389407056969803 (change=14.969800776062502 %)
[2025-10-12 14:27:10] 2025-10-12 18:26:25,522 | INFO     | left removable region: 20
[2025-10-12 14:27:10] 2025-10-12 18:26:25,522 | INFO     | sum of square deviations: 3723842949.222701
[2025-10-12 14:27:10] 2025-10-12 18:26:25,534 | INFO     | sum of deviations: -13507924272.951963
[2025-10-12 14:27:10] 2025-10-12 18:26:25,535 | INFO     | mean x: 1760286210.489083
[2025-10-12 14:27:10] 2025-10-12 18:26:25,535 | INFO     | mean y: 2572624.419213974
[2025-10-12 14:27:10] 2025-10-12 18:26:25,535 | INFO     | -- intersect: 6387861465.607158
[2025-10-12 14:27:10] 2025-10-12 18:26:25,535 | INFO     | intersect: 6387861465.607158
[2025-10-12 14:27:10] 2025-10-12 18:26:25,536 | INFO     | chi2: 0.02182272631342264
[2025-10-12 14:27:10] 2025-10-12 18:26:25,536 | INFO     | -- intersect: 6387861465.607158
[2025-10-12 14:27:10] 2025-10-12 18:26:25,536 | INFO     | current memory leak: -3.63 B/s (using 229 data points, chi2=0.02)
[2025-10-12 14:27:10] 2025-10-12 18:26:25,547 | INFO     | could have reported an average CPU frequency of 2567 MHz (12 samples)
[2025-10-12 14:27:10] 2025-10-12 18:26:25,547 | INFO     | ..............................
[2025-10-12 14:27:10] 2025-10-12 18:26:25,547 | INFO     | . Timing measurements:
[2025-10-12 14:27:10] 2025-10-12 18:26:25,548 | INFO     | . get job = 0 s
[2025-10-12 14:27:10] 2025-10-12 18:26:25,548 | INFO     | . initial setup = 5 s
[2025-10-12 14:27:10] 2025-10-12 18:26:25,548 | INFO     | . payload setup = 50 s
[2025-10-12 14:27:10] 2025-10-12 18:26:25,548 | INFO     | . stage-in = 0 s
[2025-10-12 14:27:10] 2025-10-12 18:26:25,548 | INFO     | . payload execution = 15540 s
[2025-10-12 14:27:10] 2025-10-12 18:26:25,548 | INFO     | . stage-out = 4 s
[2025-10-12 14:27:10] 2025-10-12 18:26:25,548 | INFO     | . log creation = 0 s
[2025-10-12 14:27:10] 2025-10-12 18:26:25,548 | INFO     | ..............................
[2025-10-12 14:27:10] 2025-10-12 18:26:25,898 | INFO     | time since job start (15715s) is within the limit (172800.0s)
[2025-10-12 14:27:10] 2025-10-12 18:26:25,966 | INFO     | 
[2025-10-12 14:27:10] 2025-10-12 18:26:25,967 | INFO     | job summary report
[2025-10-12 14:27:10] 2025-10-12 18:26:25,967 | INFO     | --------------------------------------------------
[2025-10-12 14:27:10] 2025-10-12 18:26:25,967 | INFO     | PanDA job id: 6839822859
[2025-10-12 14:27:10] 2025-10-12 18:26:25,967 | INFO     | task id: 46676269
[2025-10-12 14:27:10] 2025-10-12 18:26:25,967 | INFO     | errors: (none)
[2025-10-12 14:27:10] 2025-10-12 18:26:25,967 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:27:10] 2025-10-12 18:26:25,967 | INFO     | pilot state: finished 
[2025-10-12 14:27:10] 2025-10-12 18:26:25,968 | INFO     | transexitcode: 0
[2025-10-12 14:27:10] 2025-10-12 18:26:25,968 | INFO     | exeerrorcode: 0
[2025-10-12 14:27:10] 2025-10-12 18:26:25,968 | INFO     | exeerrordiag: 
[2025-10-12 14:27:10] 2025-10-12 18:26:25,968 | INFO     | exitcode: 0
[2025-10-12 14:27:10] 2025-10-12 18:26:25,968 | INFO     | exitmsg: OK
[2025-10-12 14:27:10] 2025-10-12 18:26:25,968 | INFO     | cpuconsumptiontime: 51454 s
[2025-10-12 14:27:10] 2025-10-12 18:26:25,968 | INFO     | nevents: 400
[2025-10-12 14:27:10] 2025-10-12 18:26:25,968 | INFO     | neventsw: 0
[2025-10-12 14:27:10] 2025-10-12 18:26:25,968 | INFO     | pid: 3982321
[2025-10-12 14:27:10] 2025-10-12 18:26:25,968 | INFO     | pgrp: 3982321
[2025-10-12 14:27:10] 2025-10-12 18:26:25,968 | INFO     | corecount: 9
[2025-10-12 14:27:10] 2025-10-12 18:26:25,968 | INFO     | event service: False
[2025-10-12 14:27:10] 2025-10-12 18:26:25,969 | INFO     | sizes: {0: 2348028, 1: 2348629, 2: 2348713, 3: 2348940, 4: 2348940, 15: 2348968, 26: 2349124, 37: 2349124, 38: 2349414, 48: 2349442, 15595: 2380764, 15599: 2389762
[2025-10-12 14:27:10] 2025-10-12 18:26:25,969 | INFO     | --------------------------------------------------
[2025-10-12 14:27:10] 2025-10-12 18:26:25,969 | INFO     | 
[2025-10-12 14:27:10] 2025-10-12 18:26:25,969 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 14:27:10] 2025-10-12 18:26:26,109 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:27:10] 2025-10-12 18:26:26,110 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:27:10] 2025-10-12 18:26:26,110 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:27:10] 2025-10-12 18:26:26,110 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:27:10] 2025-10-12 18:26:26,110 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:27:10] 2025-10-12 18:26:26,110 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:27:10] 2025-10-12 18:26:26,110 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:27:10] 2025-10-12 18:26:26,111 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:27:10] 2025-10-12 18:26:26,111 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:27:10] 2025-10-12 18:26:26,111 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:27:10] 2025-10-12 18:26:26,111 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:27:10] 2025-10-12 18:26:26,111 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:27:10] 2025-10-12 18:26:26,111 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:27:10] 2025-10-12 18:26:26,111 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:27:10] 2025-10-12 18:26:26,111 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:27:10] 2025-10-12 18:26:26,112 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:27:10] 2025-10-12 18:26:26,112 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:27:10] 2025-10-12 18:26:26,112 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:27:10] 2025-10-12 18:26:26,112 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:27:10] 2025-10-12 18:26:26,112 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:27:10] 2025-10-12 18:26:26,112 | INFO     | job 6839822859 has completed (purged errors)
[2025-10-12 14:27:10] 2025-10-12 18:26:26,112 | INFO     | overall cleanup function is called
[2025-10-12 14:27:10] 2025-10-12 18:26:27,134 | INFO     | --- collectZombieJob: --- 10, [3982321]
[2025-10-12 14:27:10] 2025-10-12 18:26:27,135 | INFO     | zombie collector waiting for pid 3982321
[2025-10-12 14:27:10] 2025-10-12 18:26:27,139 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:27:10] 2025-10-12 18:26:27,139 | INFO     | collected zombie processes
[2025-10-12 14:27:10] 2025-10-12 18:26:27,140 | INFO     | will attempt to kill all subprocesses of pid=3982321
[2025-10-12 14:27:10] 2025-10-12 18:26:29,931 | INFO     | process IDs to be killed: [3982321] (in reverse order)
[2025-10-12 14:27:10] 2025-10-12 18:26:30,185 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:27:10] 2025-10-12 18:26:30,190 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:27:10] 2025-10-12 18:26:30,252 | INFO     | did not find any defunct processes belonging to 3982321
[2025-10-12 14:27:10] 2025-10-12 18:26:30,266 | INFO     | did not find any defunct processes belonging to 3982321
[2025-10-12 14:27:10] 2025-10-12 18:26:30,266 | INFO     | ready for new job
[2025-10-12 14:27:10] 2025-10-12 18:26:30,266 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:27:10] 2025-10-12 18:26:30,269 | INFO     | ***************************************
[2025-10-12 14:27:10] 2025-10-12 18:26:30,269 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 14:27:10] 2025-10-12 18:26:30,269 | INFO     | ***************************************
[2025-10-12 14:27:10] 2025-10-12 18:26:30,269 | INFO     | 
[2025-10-12 14:27:10] 2025-10-12 18:26:30,275 | INFO     | architecture information:
[2025-10-12 14:27:10] 2025-10-12 18:26:30,276 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:27:10] 2025-10-12 18:26:30,429 | INFO     | cat /etc/os-release:
[2025-10-12 14:27:10] NAME="CentOS Linux"
[2025-10-12 14:27:10] VERSION="7 (Core)"
[2025-10-12 14:27:10] ID="centos"
[2025-10-12 14:27:10] ID_LIKE="rhel fedora"
[2025-10-12 14:27:10] VERSION_ID="7"
[2025-10-12 14:27:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:27:10] ANSI_COLOR="0;31"
[2025-10-12 14:27:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:27:10] HOME_URL="https://www.centos.org/"
[2025-10-12 14:27:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:27:10] 
[2025-10-12 14:27:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:27:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:27:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:27:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:27:10] 
[2025-10-12 14:27:10] 2025-10-12 18:26:30,430 | INFO     | ***************************************
[2025-10-12 14:27:10] 2025-10-12 18:26:30,933 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 14:27:10] 2025-10-12 18:26:31,133 | INFO     | sufficient remaining disk space (127387303936 B)
[2025-10-12 14:27:10] 2025-10-12 18:26:31,133 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:27:10] 2025-10-12 18:26:31,134 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:27:10] 2025-10-12 18:26:31,134 | INFO     | update_server=False
[2025-10-12 14:27:10] 2025-10-12 18:26:31,134 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:27:10] 2025-10-12 18:26:31,135 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:27:10] 2025-10-12 18:26:31,157 | INFO     | aborting loop
[2025-10-12 14:27:10] 2025-10-12 18:26:31,147 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:27:10] 2025-10-12 18:26:31,284 | INFO     | all data control threads have been joined
[2025-10-12 14:27:10] 2025-10-12 18:26:31,876 | INFO     | all job control threads have been joined
[2025-10-12 14:27:10] 2025-10-12 18:26:31,935 | INFO     | all payload control threads have been joined
[2025-10-12 14:27:10] 2025-10-12 18:26:32,140 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:27:10] 2025-10-12 18:26:32,158 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:27:10] 2025-10-12 18:26:32,159 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:27:10] 2025-10-12 18:26:32,163 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:27:10] 2025-10-12 18:26:32,164 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:27:10] 2025-10-12 18:26:32,287 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:27:10] 2025-10-12 18:26:32,298 | INFO     | [data] control thread has finished
[2025-10-12 14:27:10] 2025-10-12 18:26:32,497 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:27:10] 2025-10-12 18:26:32,882 | INFO     | [job] control thread has finished
[2025-10-12 14:27:10] 2025-10-12 18:26:32,941 | INFO     | [payload] control thread has finished
[2025-10-12 14:27:10] 2025-10-12 18:26:33,140 | INFO     | [job] validate thread has finished
[2025-10-12 14:27:10] 2025-10-12 18:26:33,216 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:27:10] 2025-10-12 18:26:33,459 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:27:10] 2025-10-12 18:26:33,532 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:27:10] 2025-10-12 18:26:33,533 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:27:10] 2025-10-12 18:26:34,115 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:27:10] 2025-10-12 18:26:34,295 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:27:10] 2025-10-12 18:26:38,124 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:27:10] 2025-10-12 18:26:58,230 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:27:10] 2025-10-12 18:27:00,225 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139937865115456)>', '<ExcThread(monitor, started 139937508730624)>']
[2025-10-12 14:27:10] 2025-10-12 18:27:01,505 | INFO     | PID=3974067 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 14:27:10] 2025-10-12 18:27:01,505 | INFO     | .. there are 16 such processes running
[2025-10-12 14:27:10] 2025-10-12 18:27:01,506 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:27:10] 2025-10-12 18:27:01,506 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:27:10] 2025-10-12 18:27:01,506 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:27:10] 2025-10-12 18:27:01,507 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:27:10] 2025-10-12 18:27:01,507 | INFO     | [monitor] control thread has ended
[2025-10-12 14:27:10] 2025-10-12 18:27:05,251 | INFO     | all workflow threads have been joined
[2025-10-12 14:27:10] 2025-10-12 18:27:05,251 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:27:10] 2025-10-12 18:27:05,252 | INFO     | traces error code: 0
[2025-10-12 14:27:10] 2025-10-12 18:27:05,252 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:27:10] 2025-10-12 18:27:09,608 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:27:10] 2025-10-12 18:27:09,624 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:27:10] 2025-10-12 18:27:09,638 [wrapper] pilotpid: 3974067
[2025-10-12 14:27:10] 2025-10-12 18:27:09,682 [wrapper] Pilot exit status: 0
[2025-10-12 14:27:10] 2025-10-12 18:27:09,778 [wrapper] pandaids: 6839822859
[2025-10-12 14:27:10] 2025-10-12 18:27:10,008 [wrapper] cleanup supervisor_pilot  308890 3974068
[2025-10-12 14:27:10] 2025-10-12 18:27:10,032 [wrapper] Test setup, not cleaning
[2025-10-12 14:27:10] 2025-10-12 18:27:10,048 [wrapper] apfmon messages muted
[2025-10-12 14:27:10] 2025-10-12 18:27:10,063 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:27:10] 2025-10-12 18:27:10,076 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:27:10]  *** Error codes and diagnostics ***
[2025-10-12 14:27:10]     "exeErrorCode": 0,
[2025-10-12 14:27:10]     "exeErrorDiag": "",
[2025-10-12 14:27:10]     "pilotErrorCode": 0,
[2025-10-12 14:27:10]     "pilotErrorDiag": "",
[2025-10-12 14:27:10]  *** Listing of results directory ***
[2025-10-12 14:27:10] total 418972
[2025-10-12 14:27:10] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 05:37 pilot3.tar.gz
[2025-10-12 14:27:10] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 05:45 queuedata.json
[2025-10-12 14:27:10] -rwx------. 1 boincer umatlas     36292 Oct 12 05:46 runpilot2-wrapper.sh
[2025-10-12 14:27:10] -rw-r--r--. 1 boincer umatlas       100 Oct 12 10:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:27:10] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 10:03 run_atlas
[2025-10-12 14:27:10] -rw-r--r--. 1 boincer umatlas       105 Oct 12 10:03 job.xml
[2025-10-12 14:27:10] -rw-r--r--. 2 boincer umatlas 223283234 Oct 12 10:03 EVNT.46676267._003594.pool.root.1
[2025-10-12 14:27:10] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 10:03 shared
[2025-10-12 14:27:10] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 10:03 input.tar.gz
[2025-10-12 14:27:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 10:03 start_atlas.sh
[2025-10-12 14:27:10] -rw-r--r--. 1 boincer umatlas         0 Oct 12 10:03 boinc_lockfile
[2025-10-12 14:27:10] -rw-r--r--. 1 boincer umatlas      2549 Oct 12 10:03 pandaJob.out
[2025-10-12 14:27:10] -rw-------. 1 boincer umatlas    975528 Oct 12 10:04 agis_schedconf.cvmfs.json
[2025-10-12 14:27:10] drwx------. 5 boincer umatlas      4096 Oct 12 10:04 pilot3
[2025-10-12 14:27:10] -rw-r--r--. 1 boincer umatlas      6860 Oct 12 14:22 init_data.xml
[2025-10-12 14:27:10] -rw-------. 1 boincer umatlas 196998773 Oct 12 14:24 HITS.46676269._075471.pool.root.1
[2025-10-12 14:27:10] -rw-r--r--. 1 boincer umatlas       531 Oct 12 14:24 boinc_task_state.xml
[2025-10-12 14:27:10] -rw-------. 1 boincer umatlas      1046 Oct 12 14:25 memory_monitor_summary.json
[2025-10-12 14:27:10] -rw-------. 1 boincer umatlas   1560580 Oct 12 14:25 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:27:10] -rw-------. 1 boincer umatlas    484968 Oct 12 14:25 log.46676269._075471.job.log.tgz.1
[2025-10-12 14:27:10] -rw-------. 1 boincer umatlas        95 Oct 12 14:26 pilot_heartbeat.json
[2025-10-12 14:27:10] -rw-------. 1 boincer umatlas      7835 Oct 12 14:26 heartbeat.json
[2025-10-12 14:27:10] -rw-------. 1 boincer umatlas      4825 Oct 12 14:27 pilotlog.txt
[2025-10-12 14:27:10] -rw-r--r--. 1 boincer umatlas        28 Oct 12 14:27 wrapper_checkpoint.txt
[2025-10-12 14:27:10] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 14:27 boinc_mmap_file
[2025-10-12 14:27:10] -rw-------. 1 boincer umatlas   1934695 Oct 12 14:27 log.46676269._075471.job.log.1
[2025-10-12 14:27:10] -rw-------. 1 boincer umatlas       357 Oct 12 14:27 output.list
[2025-10-12 14:27:10] -rw-r--r--. 1 boincer umatlas       620 Oct 12 14:27 runtime_log
[2025-10-12 14:27:10] -rw-------. 1 boincer umatlas   2437120 Oct 12 14:27 result.tar.gz
[2025-10-12 14:27:10] -rw-------. 1 boincer umatlas       658 Oct 12 14:27 wgQMDmDq7R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmSaTMDm99zXom.diag
[2025-10-12 14:27:10] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 14:27 runtime_log.err
[2025-10-12 14:27:10] -rw-r--r--. 1 boincer umatlas     21291 Oct 12 14:27 stderr.txt
[2025-10-12 14:27:10] HITS file was successfully produced:
[2025-10-12 14:27:10] -rw-------. 1 boincer umatlas 196998773 Oct 12 14:24 shared/HITS.pool.root.1
[2025-10-12 14:27:10]  *** Contents of shared directory: ***
[2025-10-12 14:27:10] total 413400
[2025-10-12 14:27:10] -rw-r--r--. 2 boincer umatlas 223283234 Oct 12 10:03 ATLAS.root_0
[2025-10-12 14:27:10] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 10:03 input.tar.gz
[2025-10-12 14:27:10] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 10:03 start_atlas.sh
[2025-10-12 14:27:10] -rw-------. 1 boincer umatlas 196998773 Oct 12 14:24 HITS.pool.root.1
[2025-10-12 14:27:10] -rw-------. 1 boincer umatlas   2437120 Oct 12 14:27 result.tar.gz
14:27:12 (3968937): run_atlas exited; CPU time 52052.001786
14:27:12 (3968937): called boinc_finish(0)

</stderr_txt>
]]>

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