Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:07:12 (9736): wrapper (7.7.26015): starting
13:07:12 (9736): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 13:07:12] Arguments: --nthreads 8
[2025-10-13 13:07:12] Threads: 8
[2025-10-13 13:07:12] Checking for CVMFS
[2025-10-13 13:07:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 13:07:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 13:07:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 13:07:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 13:07:13] 2.11.2.0 19320 15323 68084 151658 0 155 16098242 25165825 4147 130560 0 4609559 99.948 1825117 1736 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 13:07:13] CVMFS is ok
[2025-10-13 13:07:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 13:07:13] Checking for apptainer binary...
[2025-10-13 13:07:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 13:07:13] Running /usr/bin/apptainer --version
[2025-10-13 13:07:13] apptainer version 1.3.2-1.el7
[2025-10-13 13:07:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 13:07:14] cg-vwn360.simple-grid.lan
[2025-10-13 13:07:14] apptainer works
[2025-10-13 13:07:14] Set ATHENA_PROC_NUMBER=8
[2025-10-13 13:07:14] Set ATHENA_CORE_NUMBER=8
[2025-10-13 13:07:14] Starting ATLAS job with PandaID=6838231963
[2025-10-13 13:07:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 17:09:07]  *** The last 200 lines of the pilot log: ***
[2025-10-13 17:09:07] 2025-10-13 15:08:23,781 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 17:09:07] 2025-10-13 15:08:23,781 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 17:09:07] 2025-10-13 15:08:23,786 | INFO     | fitting pss+swap vs Time
[2025-10-13 17:09:07] 2025-10-13 15:08:23,786 | INFO     | sum of square deviations: 3972995422.5
[2025-10-13 17:09:07] 2025-10-13 15:08:23,788 | INFO     | sum of deviations: 28014855516.5
[2025-10-13 17:09:07] 2025-10-13 15:08:23,788 | INFO     | mean x: 1760360837.5
[2025-10-13 17:09:07] 2025-10-13 15:08:23,789 | INFO     | mean y: 2458547.44017094
[2025-10-13 17:09:07] 2025-10-13 15:08:23,789 | INFO     | -- intersect: -12410406123.930449
[2025-10-13 17:09:07] 2025-10-13 15:08:23,789 | INFO     | intersect: -12410406123.930449
[2025-10-13 17:09:07] 2025-10-13 15:08:23,789 | INFO     | chi2: 2.265104473542082
[2025-10-13 17:09:07] 2025-10-13 15:08:23,790 | INFO     | sum of square deviations: 3723716330.0
[2025-10-13 17:09:07] 2025-10-13 15:08:23,791 | INFO     | sum of deviations: 43033506337.0
[2025-10-13 17:09:07] 2025-10-13 15:08:23,792 | INFO     | mean x: 1760360685.0
[2025-10-13 17:09:07] 2025-10-13 15:08:23,792 | INFO     | mean y: 2467565.7598253274
[2025-10-13 17:09:07] 2025-10-13 15:08:23,792 | INFO     | -- intersect: -20341319656.440624
[2025-10-13 17:09:07] 2025-10-13 15:08:23,792 | INFO     | intersect: -20341319656.440624
[2025-10-13 17:09:07] 2025-10-13 15:08:23,792 | INFO     | chi2: 1.4343631125987344
[2025-10-13 17:09:07] 2025-10-13 15:08:23,792 | INFO     | current chi2=1.4343631125987344 (change=36.675631108717326 %)
[2025-10-13 17:09:07] 2025-10-13 15:08:23,793 | INFO     | sum of square deviations: 3485088600.0
[2025-10-13 17:09:07] 2025-10-13 15:08:23,795 | INFO     | sum of deviations: 41752335384.499985
[2025-10-13 17:09:07] 2025-10-13 15:08:23,795 | INFO     | mean x: 1760360532.5
[2025-10-13 17:09:07] 2025-10-13 15:08:23,795 | INFO     | mean y: 2466746.8883928573
[2025-10-13 17:09:07] 2025-10-13 15:08:23,795 | INFO     | -- intersect: -21087144389.70566
[2025-10-13 17:09:07] 2025-10-13 15:08:23,795 | INFO     | intersect: -21087144389.70566
[2025-10-13 17:09:07] 2025-10-13 15:08:23,795 | INFO     | chi2: 1.4348791716740028
[2025-10-13 17:09:07] 2025-10-13 15:08:23,796 | INFO     | current chi2=1.4348791716740028 (change=-0.03597827291678158 %)
[2025-10-13 17:09:07] 2025-10-13 15:08:23,796 | INFO     | right removable region: 223
[2025-10-13 17:09:07] 2025-10-13 15:08:23,796 | INFO     | sum of square deviations: 3723716330.0
[2025-10-13 17:09:07] 2025-10-13 15:08:23,798 | INFO     | sum of deviations: -7406886814.000002
[2025-10-13 17:09:07] 2025-10-13 15:08:23,798 | INFO     | mean x: 1760360990.0
[2025-10-13 17:09:07] 2025-10-13 15:08:23,798 | INFO     | mean y: 2480014.3580786027
[2025-10-13 17:09:07] 2025-10-13 15:08:23,798 | INFO     | -- intersect: 3504034227.7293715
[2025-10-13 17:09:07] 2025-10-13 15:08:23,798 | INFO     | intersect: 3504034227.7293715
[2025-10-13 17:09:07] 2025-10-13 15:08:23,799 | INFO     | chi2: 0.8685791267443181
[2025-10-13 17:09:07] 2025-10-13 15:08:23,799 | INFO     | current chi2=0.8685791267443181 (change=61.653904405298 %)
[2025-10-13 17:09:07] 2025-10-13 15:08:23,799 | INFO     | sum of square deviations: 3485088600.0
[2025-10-13 17:09:07] 2025-10-13 15:08:23,801 | INFO     | sum of deviations: -5685886250.0
[2025-10-13 17:09:07] 2025-10-13 15:08:23,801 | INFO     | mean x: 1760361142.5
[2025-10-13 17:09:07] 2025-10-13 15:08:23,802 | INFO     | mean y: 2478924.276785714
[2025-10-13 17:09:07] 2025-10-13 15:08:23,802 | INFO     | -- intersect: 2874490044.7903476
[2025-10-13 17:09:07] 2025-10-13 15:08:23,802 | INFO     | intersect: 2874490044.7903476
[2025-10-13 17:09:07] 2025-10-13 15:08:23,802 | INFO     | chi2: 0.8512827189448747
[2025-10-13 17:09:07] 2025-10-13 15:08:23,802 | INFO     | current chi2=0.8512827189448747 (change=1.991345090720206 %)
[2025-10-13 17:09:07] 2025-10-13 15:08:23,803 | INFO     | left removable region: 20
[2025-10-13 17:09:07] 2025-10-13 15:08:23,803 | INFO     | sum of square deviations: 2593916542.0
[2025-10-13 17:09:07] 2025-10-13 15:08:23,811 | INFO     | sum of deviations: 6166504944.999999
[2025-10-13 17:09:07] 2025-10-13 15:08:23,811 | INFO     | mean x: 1760361112.0
[2025-10-13 17:09:07] 2025-10-13 15:08:23,811 | INFO     | mean y: 2490352.8374384237
[2025-10-13 17:09:07] 2025-10-13 15:08:23,811 | INFO     | -- intersect: -4182407397.868103
[2025-10-13 17:09:07] 2025-10-13 15:08:23,811 | INFO     | intersect: -4182407397.868103
[2025-10-13 17:09:07] 2025-10-13 15:08:23,812 | INFO     | chi2: 0.00030431387180159913
[2025-10-13 17:09:07] 2025-10-13 15:08:23,812 | INFO     | -- intersect: -4182407397.868103
[2025-10-13 17:09:07] 2025-10-13 15:08:23,812 | INFO     | current memory leak: 2.38 B/s (using 203 data points, chi2=0.00)
[2025-10-13 17:09:07] 2025-10-13 15:08:23,813 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 17:09:07] 2025-10-13 15:08:23,813 | INFO     | ..............................
[2025-10-13 17:09:07] 2025-10-13 15:08:23,813 | INFO     | . Timing measurements:
[2025-10-13 17:09:07] 2025-10-13 15:08:23,813 | INFO     | . get job = 0 s
[2025-10-13 17:09:07] 2025-10-13 15:08:23,813 | INFO     | . initial setup = 2 s
[2025-10-13 17:09:07] 2025-10-13 15:08:23,813 | INFO     | . payload setup = 15 s
[2025-10-13 17:09:07] 2025-10-13 15:08:23,813 | INFO     | . stage-in = 0 s
[2025-10-13 17:09:07] 2025-10-13 15:08:23,813 | INFO     | . payload execution = 14314 s
[2025-10-13 17:09:07] 2025-10-13 15:08:23,813 | INFO     | . stage-out = 3 s
[2025-10-13 17:09:07] 2025-10-13 15:08:23,814 | INFO     | . log creation = 1 s
[2025-10-13 17:09:07] 2025-10-13 15:08:23,814 | INFO     | ..............................
[2025-10-13 17:09:07] 2025-10-13 15:08:23,964 | INFO     | 
[2025-10-13 17:09:07] 2025-10-13 15:08:23,964 | INFO     | job summary report
[2025-10-13 17:09:07] 2025-10-13 15:08:23,964 | INFO     | --------------------------------------------------
[2025-10-13 17:09:07] 2025-10-13 15:08:23,964 | INFO     | PanDA job id: 6838231963
[2025-10-13 17:09:07] 2025-10-13 15:08:23,964 | INFO     | task id: 46676269
[2025-10-13 17:09:07] 2025-10-13 15:08:23,964 | INFO     | errors: (none)
[2025-10-13 17:09:07] 2025-10-13 15:08:23,964 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 17:09:07] 2025-10-13 15:08:23,965 | INFO     | pilot state: finished 
[2025-10-13 17:09:07] 2025-10-13 15:08:23,965 | INFO     | transexitcode: 0
[2025-10-13 17:09:07] 2025-10-13 15:08:23,965 | INFO     | exeerrorcode: 0
[2025-10-13 17:09:07] 2025-10-13 15:08:23,965 | INFO     | exeerrordiag: 
[2025-10-13 17:09:07] 2025-10-13 15:08:23,965 | INFO     | exitcode: 0
[2025-10-13 17:09:07] 2025-10-13 15:08:23,965 | INFO     | exitmsg: OK
[2025-10-13 17:09:07] 2025-10-13 15:08:23,965 | INFO     | cpuconsumptiontime: 55633 s
[2025-10-13 17:09:07] 2025-10-13 15:08:23,965 | INFO     | nevents: 400
[2025-10-13 17:09:07] 2025-10-13 15:08:23,965 | INFO     | neventsw: 0
[2025-10-13 17:09:07] 2025-10-13 15:08:23,965 | INFO     | pid: 22446
[2025-10-13 17:09:07] 2025-10-13 15:08:23,965 | INFO     | pgrp: 22446
[2025-10-13 17:09:07] 2025-10-13 15:08:23,965 | INFO     | corecount: 8
[2025-10-13 17:09:07] 2025-10-13 15:08:23,965 | INFO     | event service: False
[2025-10-13 17:09:07] 2025-10-13 15:08:23,966 | INFO     | sizes: {0: 2348857, 1: 2348885, 8: 2349147, 12: 2349175, 14334: 2379351, 14339: 2388349, 14341: 2388533, 14432: 2388727}
[2025-10-13 17:09:07] 2025-10-13 15:08:23,966 | INFO     | --------------------------------------------------
[2025-10-13 17:09:07] 2025-10-13 15:08:23,966 | INFO     | 
[2025-10-13 17:09:07] 2025-10-13 15:08:23,966 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-10-13 17:09:07] 2025-10-13 15:08:24,173 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 17:09:07] 2025-10-13 15:08:24,173 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 17:09:07] 2025-10-13 15:08:24,173 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 17:09:07] 2025-10-13 15:08:24,173 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 17:09:07] 2025-10-13 15:08:24,173 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 17:09:07] 2025-10-13 15:08:24,173 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 17:09:07] 2025-10-13 15:08:24,174 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 17:09:07] 2025-10-13 15:08:24,174 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 17:09:07] 2025-10-13 15:08:24,174 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 17:09:07] 2025-10-13 15:08:24,174 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 17:09:07] 2025-10-13 15:08:24,174 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 17:09:07] 2025-10-13 15:08:24,174 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 17:09:07] 2025-10-13 15:08:24,174 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 17:09:07] 2025-10-13 15:08:24,174 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 17:09:07] 2025-10-13 15:08:24,174 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 17:09:07] 2025-10-13 15:08:24,174 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 17:09:07] 2025-10-13 15:08:24,175 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 17:09:07] 2025-10-13 15:08:24,175 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 17:09:07] 2025-10-13 15:08:24,175 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 17:09:07] 2025-10-13 15:08:24,175 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 17:09:07] 2025-10-13 15:08:24,175 | INFO     | job 6838231963 has completed (purged errors)
[2025-10-13 17:09:07] 2025-10-13 15:08:24,175 | INFO     | overall cleanup function is called
[2025-10-13 17:09:07] 2025-10-13 15:08:25,184 | INFO     | --- collectZombieJob: --- 10, [22446]
[2025-10-13 17:09:07] 2025-10-13 15:08:25,185 | INFO     | zombie collector waiting for pid 22446
[2025-10-13 17:09:07] 2025-10-13 15:08:25,185 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 17:09:07] 2025-10-13 15:08:25,185 | INFO     | collected zombie processes
[2025-10-13 17:09:07] 2025-10-13 15:08:25,185 | INFO     | will attempt to kill all subprocesses of pid=22446
[2025-10-13 17:09:07] 2025-10-13 15:08:25,313 | INFO     | process IDs to be killed: [22446] (in reverse order)
[2025-10-13 17:09:07] 2025-10-13 15:08:26,091 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 17:09:07] 2025-10-13 15:08:26,092 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 17:09:07] 2025-10-13 15:08:26,096 | INFO     | did not find any defunct processes belonging to 22446
[2025-10-13 17:09:07] 2025-10-13 15:08:26,099 | INFO     | did not find any defunct processes belonging to 22446
[2025-10-13 17:09:07] 2025-10-13 15:08:26,099 | INFO     | ready for new job
[2025-10-13 17:09:07] 2025-10-13 15:08:26,099 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 17:09:07] 2025-10-13 15:08:26,101 | INFO     | ***************************************
[2025-10-13 17:09:07] 2025-10-13 15:08:26,101 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 17:09:07] 2025-10-13 15:08:26,102 | INFO     | ***************************************
[2025-10-13 17:09:07] 2025-10-13 15:08:26,102 | INFO     | 
[2025-10-13 17:09:07] 2025-10-13 15:08:26,102 | INFO     | pilot is running in a VM
[2025-10-13 17:09:07] 2025-10-13 15:08:26,102 | INFO     | architecture information:
[2025-10-13 17:09:07] 2025-10-13 15:08:26,114 | INFO     | executing command: cat /etc/os-release
[2025-10-13 17:09:07] 2025-10-13 15:08:26,395 | INFO     | cat /etc/os-release:
[2025-10-13 17:09:07] NAME="CentOS Linux"
[2025-10-13 17:09:07] VERSION="7 (Core)"
[2025-10-13 17:09:07] ID="centos"
[2025-10-13 17:09:07] ID_LIKE="rhel fedora"
[2025-10-13 17:09:07] VERSION_ID="7"
[2025-10-13 17:09:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 17:09:07] ANSI_COLOR="0;31"
[2025-10-13 17:09:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 17:09:07] HOME_URL="https://www.centos.org/"
[2025-10-13 17:09:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 17:09:07] 
[2025-10-13 17:09:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 17:09:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 17:09:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 17:09:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 17:09:07] 
[2025-10-13 17:09:07] 2025-10-13 15:08:26,395 | INFO     | ***************************************
[2025-10-13 17:09:07] 2025-10-13 15:08:26,899 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-10-13 17:09:07] 2025-10-13 15:08:27,174 | INFO     | sufficient remaining disk space (495536046080 B)
[2025-10-13 17:09:07] 2025-10-13 15:08:27,174 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 17:09:07] 2025-10-13 15:08:27,175 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 17:09:07] 2025-10-13 15:08:27,175 | INFO     | update_server=False
[2025-10-13 17:09:07] 2025-10-13 15:08:27,175 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 17:09:07] 2025-10-13 15:08:27,177 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 17:09:07] 2025-10-13 15:08:27,178 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:09:07] 2025-10-13 15:08:27,178 | INFO     | aborting loop
[2025-10-13 17:09:07] 2025-10-13 15:08:27,293 | INFO     | all payload control threads have been joined
[2025-10-13 17:09:07] 2025-10-13 15:08:27,798 | INFO     | all job control threads have been joined
[2025-10-13 17:09:07] 2025-10-13 15:08:27,876 | INFO     | all data control threads have been joined
[2025-10-13 17:09:07] 2025-10-13 15:08:28,181 | INFO     | [job] retrieve thread has finished
[2025-10-13 17:09:07] 2025-10-13 15:08:28,184 | INFO     | [job] job monitor thread has finished
[2025-10-13 17:09:07] 2025-10-13 15:08:28,224 | INFO     | [data] copytool_in thread has finished
[2025-10-13 17:09:07] 2025-10-13 15:08:28,299 | INFO     | [payload] control thread has finished
[2025-10-13 17:09:07] 2025-10-13 15:08:28,444 | INFO     | [payload] failed_post thread has finished
[2025-10-13 17:09:07] 2025-10-13 15:08:28,558 | INFO     | [payload] validate_post thread has finished
[2025-10-13 17:09:07] 2025-10-13 15:08:28,633 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 17:09:07] 2025-10-13 15:08:28,804 | INFO     | [job] control thread has finished
[2025-10-13 17:09:07] 2025-10-13 15:08:28,847 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 17:09:07] 2025-10-13 15:08:28,882 | INFO     | [data] control thread has finished
[2025-10-13 17:09:07] 2025-10-13 15:08:28,981 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 17:09:07] 2025-10-13 15:08:29,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 17:09:07] 2025-10-13 15:08:29,184 | INFO     | [data] copytool_out thread has finished
[2025-10-13 17:09:07] 2025-10-13 15:08:29,586 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 17:09:07] 2025-10-13 15:08:29,640 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 17:09:07] 2025-10-13 15:08:29,661 | INFO     | [job] validate thread has finished
[2025-10-13 17:09:07] 2025-10-13 15:08:29,987 | INFO     | [job] queue monitor thread has finished
[2025-10-13 17:09:07] 2025-10-13 15:08:33,067 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 17:09:07] 2025-10-13 15:08:56,475 | INFO     | PID=13481 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 17:09:07] 2025-10-13 15:08:56,476 | INFO     | .. there are 9 such processes running
[2025-10-13 17:09:07] 2025-10-13 15:08:56,477 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 17:09:07] 2025-10-13 15:08:56,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 17:09:07] 2025-10-13 15:08:56,478 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 17:09:07] 2025-10-13 15:08:57,542 | INFO     | [monitor] cgroup control has ended
[2025-10-13 17:09:07] 2025-10-13 15:08:58,110 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139851046647616)>', '<ExcThread(monitor, started 139850611144448)>']
[2025-10-13 17:09:07] 2025-10-13 15:08:58,489 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 17:09:07] 2025-10-13 15:08:58,490 | INFO     | [monitor] control thread has ended
[2025-10-13 17:09:07] 2025-10-13 15:09:03,136 | INFO     | all workflow threads have been joined
[2025-10-13 17:09:07] 2025-10-13 15:09:03,137 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 17:09:07] 2025-10-13 15:09:03,137 | INFO     | traces error code: 0
[2025-10-13 17:09:07] 2025-10-13 15:09:03,137 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 17:09:07] 2025-10-13 15:09:03,508 [wrapper] ==== pilot stdout END ====
[2025-10-13 17:09:07] 2025-10-13 15:09:03,603 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 17:09:07] 2025-10-13 15:09:03,679 [wrapper] pilotpid: 13481
[2025-10-13 17:09:07] 2025-10-13 15:09:03,823 [wrapper] Pilot exit status: 0
[2025-10-13 17:09:07] 2025-10-13 15:09:04,231 [wrapper] pandaids: 6838231963
[2025-10-13 17:09:07] 2025-10-13 15:09:05,044 [wrapper] cleanup supervisor_pilot 30498 13482
[2025-10-13 17:09:07] 2025-10-13 15:09:05,063 [wrapper] Test setup, not cleaning
[2025-10-13 17:09:07] 2025-10-13 15:09:05,187 [wrapper] apfmon messages muted
[2025-10-13 17:09:07] 2025-10-13 15:09:05,296 [wrapper] ==== wrapper stdout END ====
[2025-10-13 17:09:07] 2025-10-13 15:09:05,384 [wrapper] ==== wrapper stderr END ====
[2025-10-13 17:09:07]  *** Error codes and diagnostics ***
[2025-10-13 17:09:07]     "exeErrorCode": 0,
[2025-10-13 17:09:07]     "exeErrorDiag": "",
[2025-10-13 17:09:07]     "pilotErrorCode": 0,
[2025-10-13 17:09:07]     "pilotErrorDiag": "",
[2025-10-13 17:09:07]  *** Listing of results directory ***
[2025-10-13 17:09:07] total 411988
[2025-10-13 17:09:07] -rw-r--r--. 1 boinc boinc    557409 Oct 11 10:40 pilot3.tar.gz
[2025-10-13 17:09:07] -rw-r--r--. 1 boinc boinc      5112 Oct 11 10:55 queuedata.json
[2025-10-13 17:09:07] -rwx------. 1 boinc boinc     36292 Oct 11 10:55 runpilot2-wrapper.sh
[2025-10-13 17:09:07] -rw-r--r--. 1 boinc boinc       100 Oct 13 13:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 17:09:07] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 13:07 run_atlas
[2025-10-13 17:09:07] -rw-r--r--. 1 boinc boinc       105 Oct 13 13:07 job.xml
[2025-10-13 17:09:07] -rw-r--r--. 1 boinc boinc      6387 Oct 13 13:07 init_data.xml
[2025-10-13 17:09:07] -rw-r--r--. 2 boinc boinc 221225752 Oct 13 13:07 EVNT.46676267._002190.pool.root.1
[2025-10-13 17:09:07] -rw-r--r--. 2 boinc boinc     15120 Oct 13 13:07 start_atlas.sh
[2025-10-13 17:09:07] drwxrwx--x. 2 boinc boinc        68 Oct 13 13:07 shared
[2025-10-13 17:09:07] -rw-r--r--. 2 boinc boinc    569678 Oct 13 13:07 input.tar.gz
[2025-10-13 17:09:07] -rw-r--r--. 1 boinc boinc         0 Oct 13 13:07 boinc_lockfile
[2025-10-13 17:09:07] -rw-r--r--. 1 boinc boinc      2550 Oct 13 13:07 pandaJob.out
[2025-10-13 17:09:07] -rw-------. 1 boinc boinc    972497 Oct 13 13:07 agis_schedconf.cvmfs.json
[2025-10-13 17:09:07] drwx------. 5 boinc boinc      4096 Oct 13 13:07 pilot3
[2025-10-13 17:09:07] -rw-------. 1 boinc boinc 191945615 Oct 13 17:05 HITS.46676269._054594.pool.root.1
[2025-10-13 17:09:07] -rw-r--r--. 1 boinc boinc       531 Oct 13 17:05 boinc_task_state.xml
[2025-10-13 17:09:07] -rw-------. 1 boinc boinc      1015 Oct 13 17:06 memory_monitor_summary.json
[2025-10-13 17:09:07] -rw-------. 1 boinc boinc   1560580 Oct 13 17:06 agis_ddmendpoints.agis.ALL.json
[2025-10-13 17:09:07] -rw-------. 1 boinc boinc    459927 Oct 13 17:06 log.46676269._054594.job.log.tgz.1
[2025-10-13 17:09:07] -rw-------. 1 boinc boinc      7775 Oct 13 17:08 heartbeat.json
[2025-10-13 17:09:07] -rw-r--r--. 1 boinc boinc      8192 Oct 13 17:08 boinc_mmap_file
[2025-10-13 17:09:07] -rw-r--r--. 1 boinc boinc        28 Oct 13 17:08 wrapper_checkpoint.txt
[2025-10-13 17:09:07] -rw-------. 1 boinc boinc        95 Oct 13 17:08 pilot_heartbeat.json
[2025-10-13 17:09:07] -rw-------. 1 boinc boinc      4884 Oct 13 17:09 pilotlog.txt
[2025-10-13 17:09:07] -rw-------. 1 boinc boinc   1948787 Oct 13 17:09 log.46676269._054594.job.log.1
[2025-10-13 17:09:07] -rw-------. 1 boinc boinc       357 Oct 13 17:09 output.list
[2025-10-13 17:09:07] -rw-r--r--. 1 boinc boinc       620 Oct 13 17:09 runtime_log
[2025-10-13 17:09:07] -rw-------. 1 boinc boinc   2426880 Oct 13 17:09 result.tar.gz
[2025-10-13 17:09:07] -rw-------. 1 boinc boinc       657 Oct 13 17:09 T2ALDm9YkR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmaaRMDmftC6Mm.diag
[2025-10-13 17:09:07] -rw-r--r--. 1 boinc boinc      8703 Oct 13 17:09 runtime_log.err
[2025-10-13 17:09:07] -rw-r--r--. 1 boinc boinc     20566 Oct 13 17:09 stderr.txt
[2025-10-13 17:09:07] HITS file was successfully produced:
[2025-10-13 17:09:07] -rw-------. 1 boinc boinc 191945615 Oct 13 17:05 shared/HITS.pool.root.1
[2025-10-13 17:09:07]  *** Contents of shared directory: ***
[2025-10-13 17:09:07] total 406440
[2025-10-13 17:09:07] -rw-r--r--. 2 boinc boinc 221225752 Oct 13 13:07 ATLAS.root_0
[2025-10-13 17:09:07] -rw-r--r--. 2 boinc boinc     15120 Oct 13 13:07 start_atlas.sh
[2025-10-13 17:09:07] -rw-r--r--. 2 boinc boinc    569678 Oct 13 13:07 input.tar.gz
[2025-10-13 17:09:07] -rw-------. 1 boinc boinc 191945615 Oct 13 17:05 HITS.pool.root.1
[2025-10-13 17:09:07] -rw-------. 1 boinc boinc   2426880 Oct 13 17:09 result.tar.gz
17:09:08 (9736): run_atlas exited; CPU time 55818.826151
17:09:08 (9736): called boinc_finish(0)

</stderr_txt>
]]>

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