Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
11:31:13 (72648): wrapper (7.7.26015): starting
11:31:13 (72648): wrapper: running run_atlas (--nthreads 5)
[2025-10-12 11:31:13] Arguments: --nthreads 5
[2025-10-12 11:31:13] Threads: 5
[2025-10-12 11:31:13] Checking for CVMFS
[2025-10-12 11:31:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:31:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:31:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:31:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:31:14] 2.11.0.0 2490241 3317 103476 151625 1 57 2659575 4096001 6454 130560 0 16683651 99.997 258527 5262 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 11:31:14] CVMFS is ok
[2025-10-12 11:31:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:31:14] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 11:31:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 11:31:14] Further information can be found at the LHC@home message board.
[2025-10-12 11:31:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:31:14] Checking for apptainer binary...
[2025-10-12 11:31:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:31:14] Running /usr/bin/apptainer --version
[2025-10-12 11:31:14] apptainer version 1.4.3
[2025-10-12 11:31:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:31:14] x32-linux4
[2025-10-12 11:31:14] apptainer works
[2025-10-12 11:31:15] Set ATHENA_PROC_NUMBER=5
[2025-10-12 11:31:15] Set ATHENA_CORE_NUMBER=5
[2025-10-12 11:31:15] Starting ATLAS job with PandaID=6839591112
[2025-10-12 11:31:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:33:50]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:33:50] 2025-10-12 17:32:58,170 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:33:50] 2025-10-12 17:32:58,170 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:33:50] 2025-10-12 17:32:58,170 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:33:50] 2025-10-12 17:32:58,178 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:33:50] 2025-10-12 17:32:58,178 | INFO     | sum of square deviations: 522502820.0
[2025-10-12 13:33:50] 2025-10-12 17:32:58,179 | INFO     | sum of deviations: -7892663241.999999
[2025-10-12 13:33:50] 2025-10-12 17:32:58,179 | INFO     | mean x: 1760286730.0
[2025-10-12 13:33:50] 2025-10-12 17:32:58,179 | INFO     | mean y: 2384885.2268907563
[2025-10-12 13:33:50] 2025-10-12 17:32:58,179 | INFO     | -- intersect: 26592385622.928894
[2025-10-12 13:33:50] 2025-10-12 17:32:58,179 | INFO     | intersect: 26592385622.928894
[2025-10-12 13:33:50] 2025-10-12 17:32:58,179 | INFO     | chi2: 1.9447586955852292
[2025-10-12 13:33:50] 2025-10-12 17:32:58,179 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 13:33:50] 2025-10-12 17:32:58,180 | INFO     | sum of deviations: 3989400.0000098497
[2025-10-12 13:33:50] 2025-10-12 17:32:58,180 | INFO     | mean x: 1760286577.5
[2025-10-12 13:33:50] 2025-10-12 17:32:58,180 | INFO     | mean y: 2403375.1228070175
[2025-10-12 13:33:50] 2025-10-12 17:32:58,180 | INFO     | -- intersect: -12883946.465178039
[2025-10-12 13:33:50] 2025-10-12 17:32:58,180 | INFO     | intersect: -12883946.465178039
[2025-10-12 13:33:50] 2025-10-12 17:32:58,180 | INFO     | chi2: 1.2313937650475828
[2025-10-12 13:33:50] 2025-10-12 17:32:58,180 | INFO     | current chi2=1.2313937650475828 (change=36.68141102323114 %)
[2025-10-12 13:33:50] 2025-10-12 17:32:58,181 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 13:33:50] 2025-10-12 17:32:58,181 | INFO     | sum of deviations: 665857517.0000002
[2025-10-12 13:33:50] 2025-10-12 17:32:58,181 | INFO     | mean x: 1760286425.0
[2025-10-12 13:33:50] 2025-10-12 17:32:58,181 | INFO     | mean y: 2405123.220183486
[2025-10-12 13:33:50] 2025-10-12 17:32:58,181 | INFO     | -- intersect: -2916656640.227686
[2025-10-12 13:33:50] 2025-10-12 17:32:58,181 | INFO     | intersect: -2916656640.227686
[2025-10-12 13:33:50] 2025-10-12 17:32:58,181 | INFO     | chi2: 1.233278883157569
[2025-10-12 13:33:50] 2025-10-12 17:32:58,182 | INFO     | current chi2=1.233278883157569 (change=-0.15308816428133423 %)
[2025-10-12 13:33:50] 2025-10-12 17:32:58,185 | INFO     | right removable region: 108
[2025-10-12 13:33:50] 2025-10-12 17:32:58,185 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 13:33:50] 2025-10-12 17:32:58,185 | INFO     | sum of deviations: -19277685186.0
[2025-10-12 13:33:50] 2025-10-12 17:32:58,185 | INFO     | mean x: 1760286882.5
[2025-10-12 13:33:50] 2025-10-12 17:32:58,185 | INFO     | mean y: 2411503.807017544
[2025-10-12 13:33:50] 2025-10-12 17:32:58,186 | INFO     | -- intersect: 73874227810.06087
[2025-10-12 13:33:50] 2025-10-12 17:32:58,186 | INFO     | intersect: 73874227810.06087
[2025-10-12 13:33:50] 2025-10-12 17:32:58,186 | INFO     | chi2: 0.7667976485501741
[2025-10-12 13:33:50] 2025-10-12 17:32:58,186 | INFO     | current chi2=0.7667976485501741 (change=60.57106466263033 %)
[2025-10-12 13:33:50] 2025-10-12 17:32:58,186 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 13:33:50] 2025-10-12 17:32:58,186 | INFO     | sum of deviations: -18406092237.0
[2025-10-12 13:33:50] 2025-10-12 17:32:58,186 | INFO     | mean x: 1760287035.0
[2025-10-12 13:33:50] 2025-10-12 17:32:58,187 | INFO     | mean y: 2409198.110091743
[2025-10-12 13:33:50] 2025-10-12 17:32:58,187 | INFO     | -- intersect: 80693153554.92104
[2025-10-12 13:33:50] 2025-10-12 17:32:58,187 | INFO     | intersect: 80693153554.92104
[2025-10-12 13:33:50] 2025-10-12 17:32:58,187 | INFO     | chi2: 0.7640911583910153
[2025-10-12 13:33:50] 2025-10-12 17:32:58,187 | INFO     | current chi2=0.7640911583910153 (change=0.3529601537349666 %)
[2025-10-12 13:33:50] 2025-10-12 17:32:58,187 | INFO     | left removable region: 20
[2025-10-12 13:33:50] 2025-10-12 17:32:58,187 | INFO     | sum of square deviations: 211285822.0
[2025-10-12 13:33:50] 2025-10-12 17:32:58,187 | INFO     | sum of deviations: -7932954016.500001
[2025-10-12 13:33:50] 2025-10-12 17:32:58,188 | INFO     | mean x: 1760287004.5
[2025-10-12 13:33:50] 2025-10-12 17:32:58,188 | INFO     | mean y: 2428664.8068181816
[2025-10-12 13:33:50] 2025-10-12 17:32:58,188 | INFO     | -- intersect: 66094302366.30407
[2025-10-12 13:33:50] 2025-10-12 17:32:58,188 | INFO     | intersect: 66094302366.30407
[2025-10-12 13:33:50] 2025-10-12 17:32:58,188 | INFO     | chi2: 0.01837091576466671
[2025-10-12 13:33:50] 2025-10-12 17:32:58,188 | INFO     | -- intersect: 66094302366.30407
[2025-10-12 13:33:50] 2025-10-12 17:32:58,188 | INFO     | current memory leak: -37.55 B/s (using 88 data points, chi2=0.02)
[2025-10-12 13:33:50] 2025-10-12 17:32:58,188 | INFO     | could have reported an average CPU frequency of 3796 MHz (8 samples)
[2025-10-12 13:33:50] 2025-10-12 17:32:58,188 | INFO     | ..............................
[2025-10-12 13:33:50] 2025-10-12 17:32:58,188 | INFO     | . Timing measurements:
[2025-10-12 13:33:50] 2025-10-12 17:32:58,189 | INFO     | . get job = 0 s
[2025-10-12 13:33:50] 2025-10-12 17:32:58,193 | INFO     | . initial setup = 2 s
[2025-10-12 13:33:50] 2025-10-12 17:32:58,193 | INFO     | . payload setup = 10 s
[2025-10-12 13:33:50] 2025-10-12 17:32:58,193 | INFO     | . stage-in = 0 s
[2025-10-12 13:33:50] 2025-10-12 17:32:58,193 | INFO     | . payload execution = 7225 s
[2025-10-12 13:33:50] 2025-10-12 17:32:58,193 | INFO     | . stage-out = 11 s
[2025-10-12 13:33:50] 2025-10-12 17:32:58,193 | INFO     | . log creation = 0 s
[2025-10-12 13:33:50] 2025-10-12 17:32:58,193 | INFO     | ..............................
[2025-10-12 13:33:50] 2025-10-12 17:32:58,296 | INFO     | 
[2025-10-12 13:33:50] 2025-10-12 17:32:58,296 | INFO     | job summary report
[2025-10-12 13:33:50] 2025-10-12 17:32:58,296 | INFO     | --------------------------------------------------
[2025-10-12 13:33:50] 2025-10-12 17:32:58,296 | INFO     | PanDA job id: 6839591112
[2025-10-12 13:33:50] 2025-10-12 17:32:58,296 | INFO     | task id: 46676269
[2025-10-12 13:33:50] 2025-10-12 17:32:58,296 | INFO     | errors: (none)
[2025-10-12 13:33:50] 2025-10-12 17:32:58,296 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:33:50] 2025-10-12 17:32:58,296 | INFO     | pilot state: finished 
[2025-10-12 13:33:50] 2025-10-12 17:32:58,297 | INFO     | transexitcode: 0
[2025-10-12 13:33:50] 2025-10-12 17:32:58,297 | INFO     | exeerrorcode: 0
[2025-10-12 13:33:50] 2025-10-12 17:32:58,297 | INFO     | exeerrordiag: 
[2025-10-12 13:33:50] 2025-10-12 17:32:58,297 | INFO     | exitcode: 0
[2025-10-12 13:33:50] 2025-10-12 17:32:58,297 | INFO     | exitmsg: OK
[2025-10-12 13:33:50] 2025-10-12 17:32:58,297 | INFO     | cpuconsumptiontime: 28906 s
[2025-10-12 13:33:50] 2025-10-12 17:32:58,297 | INFO     | nevents: 400
[2025-10-12 13:33:50] 2025-10-12 17:32:58,297 | INFO     | neventsw: 0
[2025-10-12 13:33:50] 2025-10-12 17:32:58,297 | INFO     | pid: 83137
[2025-10-12 13:33:50] 2025-10-12 17:32:58,297 | INFO     | pgrp: 83137
[2025-10-12 13:33:50] 2025-10-12 17:32:58,297 | INFO     | corecount: 5
[2025-10-12 13:33:50] 2025-10-12 17:32:58,297 | INFO     | event service: False
[2025-10-12 13:33:50] 2025-10-12 17:32:58,297 | INFO     | sizes: {0: 2348719, 1: 2348918, 9: 2349180, 11: 2349208, 7239: 2376451, 7252: 2385685, 7254: 2385869, 7265: 2385893}
[2025-10-12 13:33:50] 2025-10-12 17:32:58,297 | INFO     | --------------------------------------------------
[2025-10-12 13:33:50] 2025-10-12 17:32:58,297 | INFO     | 
[2025-10-12 13:33:50] 2025-10-12 17:32:58,297 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-10-12 13:33:50] 2025-10-12 17:32:58,327 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:33:50] 2025-10-12 17:32:58,328 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:33:50] 2025-10-12 17:32:58,328 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:33:50] 2025-10-12 17:32:58,328 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:33:50] 2025-10-12 17:32:58,328 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:33:50] 2025-10-12 17:32:58,328 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:33:50] 2025-10-12 17:32:58,328 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:33:50] 2025-10-12 17:32:58,328 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:33:50] 2025-10-12 17:32:58,328 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:33:50] 2025-10-12 17:32:58,328 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:33:50] 2025-10-12 17:32:58,328 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:33:50] 2025-10-12 17:32:58,328 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:33:50] 2025-10-12 17:32:58,328 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:33:50] 2025-10-12 17:32:58,328 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:33:50] 2025-10-12 17:32:58,328 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:33:50] 2025-10-12 17:32:58,329 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:33:50] 2025-10-12 17:32:58,329 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:33:50] 2025-10-12 17:32:58,329 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:33:50] 2025-10-12 17:32:58,329 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:33:50] 2025-10-12 17:32:58,329 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:33:50] 2025-10-12 17:32:58,329 | INFO     | job 6839591112 has completed (purged errors)
[2025-10-12 13:33:50] 2025-10-12 17:32:58,329 | INFO     | overall cleanup function is called
[2025-10-12 13:33:50] 2025-10-12 17:32:59,343 | INFO     | --- collectZombieJob: --- 10, [83137]
[2025-10-12 13:33:50] 2025-10-12 17:32:59,343 | INFO     | zombie collector waiting for pid 83137
[2025-10-12 13:33:50] 2025-10-12 17:32:59,343 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:33:50] 2025-10-12 17:32:59,343 | INFO     | collected zombie processes
[2025-10-12 13:33:50] 2025-10-12 17:32:59,343 | INFO     | will attempt to kill all subprocesses of pid=83137
[2025-10-12 13:33:50] 2025-10-12 17:32:59,602 | INFO     | process IDs to be killed: [83137] (in reverse order)
[2025-10-12 13:33:50] 2025-10-12 17:32:59,703 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:33:50] 2025-10-12 17:32:59,703 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:33:50] 2025-10-12 17:32:59,714 | INFO     | did not find any defunct processes belonging to 83137
[2025-10-12 13:33:50] 2025-10-12 17:32:59,718 | INFO     | did not find any defunct processes belonging to 83137
[2025-10-12 13:33:50] 2025-10-12 17:32:59,722 | INFO     | ready for new job
[2025-10-12 13:33:50] 2025-10-12 17:32:59,722 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:33:50] 2025-10-12 17:32:59,723 | INFO     | ***************************************
[2025-10-12 13:33:50] 2025-10-12 17:32:59,723 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:33:50] 2025-10-12 17:32:59,723 | INFO     | ***************************************
[2025-10-12 13:33:50] 2025-10-12 17:32:59,723 | INFO     | 
[2025-10-12 13:33:50] 2025-10-12 17:32:59,725 | INFO     | architecture information:
[2025-10-12 13:33:50] 2025-10-12 17:32:59,729 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:33:50] 2025-10-12 17:32:59,750 | INFO     | cat /etc/os-release:
[2025-10-12 13:33:50] NAME="CentOS Linux"
[2025-10-12 13:33:50] VERSION="7 (Core)"
[2025-10-12 13:33:50] ID="centos"
[2025-10-12 13:33:50] ID_LIKE="rhel fedora"
[2025-10-12 13:33:50] VERSION_ID="7"
[2025-10-12 13:33:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:33:50] ANSI_COLOR="0;31"
[2025-10-12 13:33:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:33:50] HOME_URL="https://www.centos.org/"
[2025-10-12 13:33:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:33:50] 
[2025-10-12 13:33:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:33:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:33:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:33:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:33:50] 
[2025-10-12 13:33:50] 2025-10-12 17:32:59,750 | INFO     | ***************************************
[2025-10-12 13:33:50] 2025-10-12 17:33:00,253 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-10-12 13:33:50] 2025-10-12 17:33:00,280 | INFO     | sufficient remaining disk space (148738408448 B)
[2025-10-12 13:33:50] 2025-10-12 17:33:00,280 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:33:50] 2025-10-12 17:33:00,281 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:33:50] 2025-10-12 17:33:00,281 | INFO     | update_server=False
[2025-10-12 13:33:50] 2025-10-12 17:33:00,281 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:33:50] 2025-10-12 17:33:00,281 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:33:50] 2025-10-12 17:33:00,540 | INFO     | all data control threads have been joined
[2025-10-12 13:33:50] 2025-10-12 17:33:00,844 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:33:50] 2025-10-12 17:33:00,844 | INFO     | aborting loop
[2025-10-12 13:33:50] 2025-10-12 17:33:00,883 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:33:50] 2025-10-12 17:33:01,044 | INFO     | all payload control threads have been joined
[2025-10-12 13:33:50] 2025-10-12 17:33:01,286 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:33:50] 2025-10-12 17:33:01,286 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:33:50] 2025-10-12 17:33:01,345 | INFO     | all job control threads have been joined
[2025-10-12 13:33:50] 2025-10-12 17:33:01,486 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:33:50] 2025-10-12 17:33:01,545 | INFO     | [data] control thread has finished
[2025-10-12 13:33:50] 2025-10-12 17:33:01,692 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:33:50] 2025-10-12 17:33:01,849 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:33:50] 2025-10-12 17:33:01,988 | INFO     | [job] validate thread has finished
[2025-10-12 13:33:50] 2025-10-12 17:33:02,049 | INFO     | [payload] control thread has finished
[2025-10-12 13:33:50] 2025-10-12 17:33:02,171 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:33:50] 2025-10-12 17:33:02,175 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:33:50] 2025-10-12 17:33:02,277 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:33:50] 2025-10-12 17:33:02,350 | INFO     | [job] control thread has finished
[2025-10-12 13:33:50] 2025-10-12 17:33:02,397 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:33:50] 2025-10-12 17:33:02,506 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:33:50] 2025-10-12 17:33:02,617 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:33:50] 2025-10-12 17:33:02,888 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:33:50] 2025-10-12 17:33:06,180 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:33:50] 2025-10-12 17:33:30,538 | INFO     | PID=76491 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 13:33:50] 2025-10-12 17:33:30,538 | INFO     | .. there are 8 such processes running
[2025-10-12 13:33:50] 2025-10-12 17:33:30,539 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:33:50] 2025-10-12 17:33:30,539 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:33:50] 2025-10-12 17:33:30,539 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:33:50] 2025-10-12 17:33:44,798 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:33:50] 2025-10-12 17:33:45,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128491415000896)>', '<ExcThread(monitor, started 128490783368960)>']
[2025-10-12 13:33:50] 2025-10-12 17:33:45,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:33:50] 2025-10-12 17:33:45,609 | INFO     | [monitor] control thread has ended
[2025-10-12 13:33:50] 2025-10-12 17:33:50,540 | INFO     | all workflow threads have been joined
[2025-10-12 13:33:50] 2025-10-12 17:33:50,540 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:33:50] 2025-10-12 17:33:50,540 | INFO     | traces error code: 0
[2025-10-12 13:33:50] 2025-10-12 17:33:50,540 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:33:50] 2025-10-12 17:33:50,647 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:33:50] 2025-10-12 17:33:50,649 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:33:50] 2025-10-12 17:33:50,655 [wrapper] pilotpid: 76491
[2025-10-12 13:33:50] 2025-10-12 17:33:50,661 [wrapper] Pilot exit status: 0
[2025-10-12 13:33:50] 2025-10-12 17:33:50,670 [wrapper] pandaids: 6839591112
[2025-10-12 13:33:50] 2025-10-12 17:33:50,709 [wrapper] cleanup supervisor_pilot  278249 76492
[2025-10-12 13:33:50] 2025-10-12 17:33:50,712 [wrapper] Test setup, not cleaning
[2025-10-12 13:33:50] 2025-10-12 17:33:50,715 [wrapper] apfmon messages muted
[2025-10-12 13:33:50] 2025-10-12 17:33:50,717 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:33:50] 2025-10-12 17:33:50,719 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:33:50]  *** Error codes and diagnostics ***
[2025-10-12 13:33:50]     "exeErrorCode": 0,
[2025-10-12 13:33:50]     "exeErrorDiag": "",
[2025-10-12 13:33:50]     "pilotErrorCode": 0,
[2025-10-12 13:33:50]     "pilotErrorDiag": "",
[2025-10-12 13:33:50]  *** Listing of results directory ***
[2025-10-12 13:33:50] total 418952
[2025-10-12 13:33:50] -rw-r--r-- 1 boinc boinc    557409 Oct 12 02:14 pilot3.tar.gz
[2025-10-12 13:33:50] -rw-r--r-- 1 boinc boinc      5112 Oct 12 02:28 queuedata.json
[2025-10-12 13:33:50] -rwx------ 1 boinc boinc     36292 Oct 12 02:28 runpilot2-wrapper.sh
[2025-10-12 13:33:50] -rw-r--r-- 1 boinc boinc       100 Oct 12 11:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:33:50] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 11:31 run_atlas
[2025-10-12 13:33:50] -rw-r--r-- 1 boinc boinc       105 Oct 12 11:31 job.xml
[2025-10-12 13:33:50] -rw-r--r-- 2 boinc boinc    569673 Oct 12 11:31 input.tar.gz
[2025-10-12 13:33:50] -rw-r--r-- 2 boinc boinc 223252966 Oct 12 11:31 EVNT.46676267._004505.pool.root.1
[2025-10-12 13:33:50] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:31 start_atlas.sh
[2025-10-12 13:33:50] drwxrwx--x 2 boinc boinc      4096 Oct 12 11:31 shared
[2025-10-12 13:33:50] -rw-r--r-- 1 boinc boinc      9723 Oct 12 11:31 init_data.xml
[2025-10-12 13:33:50] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:31 boinc_setup_complete
[2025-10-12 13:33:50] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:31 boinc_lockfile
[2025-10-12 13:33:50] -rw-r--r-- 1 boinc boinc      2549 Oct 12 11:31 pandaJob.out
[2025-10-12 13:33:50] -rw------- 1 boinc boinc    975528 Oct 12 11:31 agis_schedconf.cvmfs.json
[2025-10-12 13:33:50] -rw------- 1 boinc boinc   1560580 Oct 12 11:31 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:33:50] drwx------ 5 boinc boinc      4096 Oct 12 11:31 pilot3
[2025-10-12 13:33:50] -rw-r--r-- 1 boinc boinc       530 Oct 12 13:32 boinc_task_state.xml
[2025-10-12 13:33:50] -rw------- 1 boinc boinc 199112905 Oct 12 13:32 HITS.46676269._072544.pool.root.1
[2025-10-12 13:33:50] -rw------- 1 boinc boinc      1026 Oct 12 13:32 memory_monitor_summary.json
[2025-10-12 13:33:50] -rw------- 1 boinc boinc    306046 Oct 12 13:32 log.46676269._072544.job.log.tgz.1
[2025-10-12 13:33:50] -rw------- 1 boinc boinc      7746 Oct 12 13:32 heartbeat.json
[2025-10-12 13:33:50] -rw------- 1 boinc boinc        95 Oct 12 13:33 pilot_heartbeat.json
[2025-10-12 13:33:50] -rw-r--r-- 1 boinc boinc        27 Oct 12 13:33 wrapper_checkpoint.txt
[2025-10-12 13:33:50] -rw-r--r-- 1 boinc boinc      8192 Oct 12 13:33 boinc_mmap_file
[2025-10-12 13:33:50] -rw------- 1 boinc boinc      4829 Oct 12 13:33 pilotlog.txt
[2025-10-12 13:33:50] -rw------- 1 boinc boinc   1059204 Oct 12 13:33 log.46676269._072544.job.log.1
[2025-10-12 13:33:50] -rw------- 1 boinc boinc       357 Oct 12 13:33 output.list
[2025-10-12 13:33:50] -rw-r--r-- 1 boinc boinc       620 Oct 12 13:33 runtime_log
[2025-10-12 13:33:50] -rw------- 1 boinc boinc   1382400 Oct 12 13:33 result.tar.gz
[2025-10-12 13:33:50] -rw-r--r-- 1 boinc boinc      8764 Oct 12 13:33 runtime_log.err
[2025-10-12 13:33:50] -rw------- 1 boinc boinc       644 Oct 12 13:33 0oJKDmBk4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCqiNDmXqVkWn.diag
[2025-10-12 13:33:50] -rw-r--r-- 1 boinc boinc     20940 Oct 12 13:33 stderr.txt
[2025-10-12 13:33:50] HITS file was successfully produced:
[2025-10-12 13:33:50] -rw------- 1 boinc boinc 199112905 Oct 12 13:32 shared/HITS.pool.root.1
[2025-10-12 13:33:50]  *** Contents of shared directory: ***
[2025-10-12 13:33:50] total 414408
[2025-10-12 13:33:50] -rw-r--r-- 2 boinc boinc    569673 Oct 12 11:31 input.tar.gz
[2025-10-12 13:33:50] -rw-r--r-- 2 boinc boinc 223252966 Oct 12 11:31 ATLAS.root_0
[2025-10-12 13:33:50] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:31 start_atlas.sh
[2025-10-12 13:33:50] -rw------- 1 boinc boinc 199112905 Oct 12 13:32 HITS.pool.root.1
[2025-10-12 13:33:50] -rw------- 1 boinc boinc   1382400 Oct 12 13:33 result.tar.gz
13:33:52 (72648): run_atlas exited; CPU time 29007.304470
13:33:52 (72648): called boinc_finish(0)

</stderr_txt>
]]>

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