Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:29:46 (29606): wrapper (7.7.26015): starting
09:29:46 (29606): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 09:29:46] Arguments: --nthreads 8
[2025-10-12 09:29:46] Threads: 8
[2025-10-12 09:29:46] Checking for CVMFS
[2025-10-12 09:29:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:29:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:29:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:29:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:29:46] 2.11.2.0 8318 53011 109820 151621 1 57 10024142 18432000 1833 130560 0 47884028 99.973 2518902 38949 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 09:29:46] CVMFS is ok
[2025-10-12 09:29:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:29:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:29:46] Further information can be found at the LHC@home message board.
[2025-10-12 09:29:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:29:46] Checking for apptainer binary...
[2025-10-12 09:29:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:29:46] Running /usr/bin/apptainer --version
[2025-10-12 09:29:46] apptainer version 1.3.2-1.el7
[2025-10-12 09:29:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:29:47] c-206-28.aglt2.org
[2025-10-12 09:29:47] apptainer works
[2025-10-12 09:29:47] Set ATHENA_PROC_NUMBER=8
[2025-10-12 09:29:47] Set ATHENA_CORE_NUMBER=8
[2025-10-12 09:29:47] Starting ATLAS job with PandaID=6839590643
[2025-10-12 09:29:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:39:22]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:39:22] 2025-10-12 16:38:50,432 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:39:22] 2025-10-12 16:38:50,432 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:39:22] 2025-10-12 16:38:50,435 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:39:22] 2025-10-12 16:38:50,435 | INFO     | sum of square deviations: 1995283922.5
[2025-10-12 12:39:22] 2025-10-12 16:38:50,436 | INFO     | sum of deviations: 4748560921.000008
[2025-10-12 12:39:22] 2025-10-12 16:38:50,436 | INFO     | mean x: 1760281464.5
[2025-10-12 12:39:22] 2025-10-12 16:38:50,436 | INFO     | mean y: 2466827.129032258
[2025-10-12 12:39:22] 2025-10-12 16:38:50,436 | INFO     | -- intersect: -4186813544.464481
[2025-10-12 12:39:22] 2025-10-12 16:38:50,436 | INFO     | intersect: -4186813544.464481
[2025-10-12 12:39:22] 2025-10-12 16:38:50,437 | INFO     | chi2: 2.2228290588229243
[2025-10-12 12:39:22] 2025-10-12 16:38:50,437 | INFO     | sum of square deviations: 1838657730.0
[2025-10-12 12:39:22] 2025-10-12 16:38:50,438 | INFO     | sum of deviations: 16684750743.999998
[2025-10-12 12:39:22] 2025-10-12 16:38:50,438 | INFO     | mean x: 1760281312.0
[2025-10-12 12:39:22] 2025-10-12 16:38:50,438 | INFO     | mean y: 2478190.149171271
[2025-10-12 12:39:22] 2025-10-12 16:38:50,438 | INFO     | -- intersect: -15971052092.749805
[2025-10-12 12:39:22] 2025-10-12 16:38:50,438 | INFO     | intersect: -15971052092.749805
[2025-10-12 12:39:22] 2025-10-12 16:38:50,438 | INFO     | chi2: 1.4569370215456992
[2025-10-12 12:39:22] 2025-10-12 16:38:50,438 | INFO     | current chi2=1.4569370215456992 (change=34.45573262762703 %)
[2025-10-12 12:39:22] 2025-10-12 16:38:50,439 | INFO     | sum of square deviations: 1690450300.0
[2025-10-12 12:39:22] 2025-10-12 16:38:50,440 | INFO     | sum of deviations: 16241922159.0
[2025-10-12 12:39:22] 2025-10-12 16:38:50,440 | INFO     | mean x: 1760281159.5
[2025-10-12 12:39:22] 2025-10-12 16:38:50,440 | INFO     | mean y: 2477734.159090909
[2025-10-12 12:39:22] 2025-10-12 16:38:50,440 | INFO     | -- intersect: -16910382449.04373
[2025-10-12 12:39:22] 2025-10-12 16:38:50,440 | INFO     | intersect: -16910382449.04373
[2025-10-12 12:39:22] 2025-10-12 16:38:50,440 | INFO     | chi2: 1.4581289650476108
[2025-10-12 12:39:22] 2025-10-12 16:38:50,440 | INFO     | current chi2=1.4581289650476108 (change=-0.081811600932969 %)
[2025-10-12 12:39:22] 2025-10-12 16:38:50,440 | INFO     | right removable region: 175
[2025-10-12 12:39:22] 2025-10-12 16:38:50,441 | INFO     | sum of square deviations: 1838657730.0
[2025-10-12 12:39:22] 2025-10-12 16:38:50,442 | INFO     | sum of deviations: -22741395177.0
[2025-10-12 12:39:22] 2025-10-12 16:38:50,442 | INFO     | mean x: 1760281617.0
[2025-10-12 12:39:22] 2025-10-12 16:38:50,442 | INFO     | mean y: 2493263.4364640885
[2025-10-12 12:39:22] 2025-10-12 16:38:50,442 | INFO     | -- intersect: 21774495317.894722
[2025-10-12 12:39:22] 2025-10-12 16:38:50,442 | INFO     | intersect: 21774495317.894722
[2025-10-12 12:39:22] 2025-10-12 16:38:50,442 | INFO     | chi2: 0.8107931772494084
[2025-10-12 12:39:22] 2025-10-12 16:38:50,442 | INFO     | current chi2=0.8107931772494084 (change=63.52426768800857 %)
[2025-10-12 12:39:22] 2025-10-12 16:38:50,443 | INFO     | sum of square deviations: 1690450300.0
[2025-10-12 12:39:22] 2025-10-12 16:38:50,444 | INFO     | sum of deviations: -20804424753.5
[2025-10-12 12:39:22] 2025-10-12 16:38:50,444 | INFO     | mean x: 1760281769.5
[2025-10-12 12:39:22] 2025-10-12 16:38:50,444 | INFO     | mean y: 2491260.960227273
[2025-10-12 12:39:22] 2025-10-12 16:38:50,444 | INFO     | -- intersect: 21666334095.334347
[2025-10-12 12:39:22] 2025-10-12 16:38:50,444 | INFO     | intersect: 21666334095.334347
[2025-10-12 12:39:22] 2025-10-12 16:38:50,444 | INFO     | chi2: 0.8102983929804041
[2025-10-12 12:39:22] 2025-10-12 16:38:50,444 | INFO     | current chi2=0.8102983929804041 (change=0.061024720346418065 %)
[2025-10-12 12:39:22] 2025-10-12 16:38:50,444 | INFO     | left removable region: 20
[2025-10-12 12:39:22] 2025-10-12 16:38:50,445 | INFO     | sum of square deviations: 1154663510.0
[2025-10-12 12:39:22] 2025-10-12 16:38:50,445 | INFO     | sum of deviations: -4658818575.000001
[2025-10-12 12:39:22] 2025-10-12 16:38:50,445 | INFO     | mean x: 1760281739.0
[2025-10-12 12:39:22] 2025-10-12 16:38:50,446 | INFO     | mean y: 2499399.9612903227
[2025-10-12 12:39:22] 2025-10-12 16:38:50,446 | INFO     | -- intersect: 7104857092.798144
[2025-10-12 12:39:22] 2025-10-12 16:38:50,446 | INFO     | intersect: 7104857092.798144
[2025-10-12 12:39:22] 2025-10-12 16:38:50,446 | INFO     | chi2: 0.015194663980219694
[2025-10-12 12:39:22] 2025-10-12 16:38:50,446 | INFO     | -- intersect: 7104857092.798144
[2025-10-12 12:39:22] 2025-10-12 16:38:50,446 | INFO     | current memory leak: -4.03 B/s (using 155 data points, chi2=0.02)
[2025-10-12 12:39:22] 2025-10-12 16:38:50,446 | INFO     | could have reported an average CPU frequency of 2466 MHz (10 samples)
[2025-10-12 12:39:22] 2025-10-12 16:38:50,447 | INFO     | ..............................
[2025-10-12 12:39:22] 2025-10-12 16:38:50,447 | INFO     | . Timing measurements:
[2025-10-12 12:39:22] 2025-10-12 16:38:50,447 | INFO     | . get job = 0 s
[2025-10-12 12:39:22] 2025-10-12 16:38:50,447 | INFO     | . initial setup = 2 s
[2025-10-12 12:39:22] 2025-10-12 16:38:50,447 | INFO     | . payload setup = 4 s
[2025-10-12 12:39:22] 2025-10-12 16:38:50,447 | INFO     | . stage-in = 0 s
[2025-10-12 12:39:22] 2025-10-12 16:38:50,447 | INFO     | . payload execution = 11299 s
[2025-10-12 12:39:22] 2025-10-12 16:38:50,447 | INFO     | . stage-out = 1 s
[2025-10-12 12:39:22] 2025-10-12 16:38:50,447 | INFO     | . log creation = 0 s
[2025-10-12 12:39:22] 2025-10-12 16:38:50,447 | INFO     | ..............................
[2025-10-12 12:39:22] 2025-10-12 16:38:50,524 | INFO     | 
[2025-10-12 12:39:22] 2025-10-12 16:38:50,524 | INFO     | job summary report
[2025-10-12 12:39:22] 2025-10-12 16:38:50,524 | INFO     | --------------------------------------------------
[2025-10-12 12:39:22] 2025-10-12 16:38:50,524 | INFO     | PanDA job id: 6839590643
[2025-10-12 12:39:22] 2025-10-12 16:38:50,524 | INFO     | task id: 46676269
[2025-10-12 12:39:22] 2025-10-12 16:38:50,524 | INFO     | errors: (none)
[2025-10-12 12:39:22] 2025-10-12 16:38:50,524 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:39:22] 2025-10-12 16:38:50,524 | INFO     | pilot state: finished 
[2025-10-12 12:39:22] 2025-10-12 16:38:50,524 | INFO     | transexitcode: 0
[2025-10-12 12:39:22] 2025-10-12 16:38:50,525 | INFO     | exeerrorcode: 0
[2025-10-12 12:39:22] 2025-10-12 16:38:50,525 | INFO     | exeerrordiag: 
[2025-10-12 12:39:22] 2025-10-12 16:38:50,525 | INFO     | exitcode: 0
[2025-10-12 12:39:22] 2025-10-12 16:38:50,525 | INFO     | exitmsg: OK
[2025-10-12 12:39:22] 2025-10-12 16:38:50,525 | INFO     | cpuconsumptiontime: 84533 s
[2025-10-12 12:39:22] 2025-10-12 16:38:50,525 | INFO     | nevents: 400
[2025-10-12 12:39:22] 2025-10-12 16:38:50,525 | INFO     | neventsw: 0
[2025-10-12 12:39:22] 2025-10-12 16:38:50,525 | INFO     | pid: 7623
[2025-10-12 12:39:22] 2025-10-12 16:38:50,525 | INFO     | pgrp: 7623
[2025-10-12 12:39:22] 2025-10-12 16:38:50,525 | INFO     | corecount: 8
[2025-10-12 12:39:22] 2025-10-12 16:38:50,526 | INFO     | event service: False
[2025-10-12 12:39:22] 2025-10-12 16:38:50,526 | INFO     | sizes: {0: 2348630, 1: 2348885, 4: 2349147, 12: 2349175, 11308: 2378532, 11310: 2387530, 11312: 2387714, 11318: 2387908}
[2025-10-12 12:39:22] 2025-10-12 16:38:50,526 | INFO     | --------------------------------------------------
[2025-10-12 12:39:22] 2025-10-12 16:38:50,526 | INFO     | 
[2025-10-12 12:39:22] 2025-10-12 16:38:50,526 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 12:39:22] 2025-10-12 16:38:50,541 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:39:22] 2025-10-12 16:38:50,541 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:39:22] 2025-10-12 16:38:50,541 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:39:22] 2025-10-12 16:38:50,541 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:39:22] 2025-10-12 16:38:50,541 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:39:22] 2025-10-12 16:38:50,542 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:39:22] 2025-10-12 16:38:50,542 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:39:22] 2025-10-12 16:38:50,542 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:39:22] 2025-10-12 16:38:50,542 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:39:22] 2025-10-12 16:38:50,542 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:39:22] 2025-10-12 16:38:50,542 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:39:22] 2025-10-12 16:38:50,542 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:39:22] 2025-10-12 16:38:50,542 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:39:22] 2025-10-12 16:38:50,542 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:39:22] 2025-10-12 16:38:50,543 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:39:22] 2025-10-12 16:38:50,543 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:39:22] 2025-10-12 16:38:50,543 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:39:22] 2025-10-12 16:38:50,543 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:39:22] 2025-10-12 16:38:50,543 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:39:22] 2025-10-12 16:38:50,543 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:39:22] 2025-10-12 16:38:50,543 | INFO     | job 6839590643 has completed (purged errors)
[2025-10-12 12:39:22] 2025-10-12 16:38:50,543 | INFO     | overall cleanup function is called
[2025-10-12 12:39:22] 2025-10-12 16:38:51,551 | INFO     | --- collectZombieJob: --- 10, [7623]
[2025-10-12 12:39:22] 2025-10-12 16:38:51,551 | INFO     | zombie collector waiting for pid 7623
[2025-10-12 12:39:22] 2025-10-12 16:38:51,551 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:39:22] 2025-10-12 16:38:51,551 | INFO     | collected zombie processes
[2025-10-12 12:39:22] 2025-10-12 16:38:51,551 | INFO     | will attempt to kill all subprocesses of pid=7623
[2025-10-12 12:39:22] 2025-10-12 16:38:51,669 | INFO     | process IDs to be killed: [7623] (in reverse order)
[2025-10-12 12:39:22] 2025-10-12 16:38:51,710 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:39:22] 2025-10-12 16:38:51,710 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:39:22] 2025-10-12 16:38:51,713 | INFO     | did not find any defunct processes belonging to 7623
[2025-10-12 12:39:22] 2025-10-12 16:38:51,715 | INFO     | did not find any defunct processes belonging to 7623
[2025-10-12 12:39:22] 2025-10-12 16:38:51,715 | INFO     | ready for new job
[2025-10-12 12:39:22] 2025-10-12 16:38:51,715 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:39:22] 2025-10-12 16:38:51,717 | INFO     | ***************************************
[2025-10-12 12:39:22] 2025-10-12 16:38:51,717 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:39:22] 2025-10-12 16:38:51,717 | INFO     | ***************************************
[2025-10-12 12:39:22] 2025-10-12 16:38:51,717 | INFO     | 
[2025-10-12 12:39:22] 2025-10-12 16:38:51,718 | INFO     | architecture information:
[2025-10-12 12:39:22] 2025-10-12 16:38:51,718 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:39:22] 2025-10-12 16:38:51,729 | INFO     | cat /etc/os-release:
[2025-10-12 12:39:22] NAME="CentOS Linux"
[2025-10-12 12:39:22] VERSION="7 (Core)"
[2025-10-12 12:39:22] ID="centos"
[2025-10-12 12:39:22] ID_LIKE="rhel fedora"
[2025-10-12 12:39:22] VERSION_ID="7"
[2025-10-12 12:39:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:39:22] ANSI_COLOR="0;31"
[2025-10-12 12:39:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:39:22] HOME_URL="https://www.centos.org/"
[2025-10-12 12:39:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:39:22] 
[2025-10-12 12:39:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:39:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:39:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:39:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:39:22] 
[2025-10-12 12:39:22] 2025-10-12 16:38:51,729 | INFO     | ***************************************
[2025-10-12 12:39:22] 2025-10-12 16:38:52,232 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 12:39:22] 2025-10-12 16:38:52,243 | INFO     | sufficient remaining disk space (27891073024 B)
[2025-10-12 12:39:22] 2025-10-12 16:38:52,243 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:39:22] 2025-10-12 16:38:52,244 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:39:22] 2025-10-12 16:38:52,244 | INFO     | update_server=False
[2025-10-12 12:39:22] 2025-10-12 16:38:52,244 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:39:22] 2025-10-12 16:38:52,244 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:39:22] 2025-10-12 16:38:52,244 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:39:22] 2025-10-12 16:38:52,584 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:39:22] 2025-10-12 16:38:52,584 | INFO     | aborting loop
[2025-10-12 12:39:22] 2025-10-12 16:38:52,604 | INFO     | all payload control threads have been joined
[2025-10-12 12:39:22] 2025-10-12 16:38:52,809 | INFO     | all data control threads have been joined
[2025-10-12 12:39:22] 2025-10-12 16:38:53,245 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:39:22] 2025-10-12 16:38:53,250 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:39:22] 2025-10-12 16:38:53,454 | INFO     | all job control threads have been joined
[2025-10-12 12:39:22] 2025-10-12 16:38:53,525 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:39:22] 2025-10-12 16:38:53,589 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:39:22] 2025-10-12 16:38:53,607 | INFO     | [payload] control thread has finished
[2025-10-12 12:39:22] 2025-10-12 16:38:53,637 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:39:22] 2025-10-12 16:38:53,637 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:39:22] 2025-10-12 16:38:53,676 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:39:22] 2025-10-12 16:38:53,814 | INFO     | [data] control thread has finished
[2025-10-12 12:39:22] 2025-10-12 16:38:54,249 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:39:22] 2025-10-12 16:38:54,259 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:39:22] 2025-10-12 16:38:54,404 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:39:22] 2025-10-12 16:38:54,458 | INFO     | [job] control thread has finished
[2025-10-12 12:39:22] 2025-10-12 16:38:54,608 | INFO     | [job] validate thread has finished
[2025-10-12 12:39:22] 2025-10-12 16:38:54,956 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:39:22] 2025-10-12 16:38:58,961 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:39:22] 2025-10-12 16:39:02,841 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:39:22] 2025-10-12 16:39:03,847 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:39:22] 2025-10-12 16:39:15,998 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:39:22] 2025-10-12 16:39:17,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139996469147456)>', '<ExcThread(monitor, started 139996153485056)>']
[2025-10-12 12:39:22] 2025-10-12 16:39:21,984 | INFO     | PID=832 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-10-12 12:39:22] 2025-10-12 16:39:21,984 | INFO     | .. there are 3 such processes running
[2025-10-12 12:39:22] 2025-10-12 16:39:21,985 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:39:22] 2025-10-12 16:39:21,985 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:39:22] 2025-10-12 16:39:21,985 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:39:22] 2025-10-12 16:39:21,985 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:39:22] 2025-10-12 16:39:21,985 | INFO     | [monitor] control thread has ended
[2025-10-12 12:39:22] 2025-10-12 16:39:22,339 | INFO     | all workflow threads have been joined
[2025-10-12 12:39:22] 2025-10-12 16:39:22,339 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:39:22] 2025-10-12 16:39:22,339 | INFO     | traces error code: 0
[2025-10-12 12:39:22] 2025-10-12 16:39:22,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:39:22] 2025-10-12 16:39:22,434 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:39:22] 2025-10-12 16:39:22,437 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:39:22] 2025-10-12 16:39:22,439 [wrapper] pilotpid: 832
[2025-10-12 12:39:22] 2025-10-12 16:39:22,442 [wrapper] Pilot exit status: 0
[2025-10-12 12:39:22] 2025-10-12 16:39:22,453 [wrapper] pandaids: 6839590643
[2025-10-12 12:39:22] 2025-10-12 16:39:22,482 [wrapper] cleanup supervisor_pilot 14300 833
[2025-10-12 12:39:22] 2025-10-12 16:39:22,485 [wrapper] Test setup, not cleaning
[2025-10-12 12:39:22] 2025-10-12 16:39:22,488 [wrapper] apfmon messages muted
[2025-10-12 12:39:22] 2025-10-12 16:39:22,490 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:39:22] 2025-10-12 16:39:22,493 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:39:22]  *** Error codes and diagnostics ***
[2025-10-12 12:39:22]     "exeErrorCode": 0,
[2025-10-12 12:39:22]     "exeErrorDiag": "",
[2025-10-12 12:39:22]     "pilotErrorCode": 0,
[2025-10-12 12:39:22]     "pilotErrorDiag": "",
[2025-10-12 12:39:22]  *** Listing of results directory ***
[2025-10-12 12:39:22] total 416144
[2025-10-12 12:39:22] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 01:26 pilot3.tar.gz
[2025-10-12 12:39:22] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 02:12 queuedata.json
[2025-10-12 12:39:22] -rwx------ 1 boincer umatlas     36292 Oct 12 02:13 runpilot2-wrapper.sh
[2025-10-12 12:39:22] -rw-r--r-- 1 boincer umatlas       100 Oct 12 09:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:39:22] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 09:29 run_atlas
[2025-10-12 12:39:22] -rw-r--r-- 1 boincer umatlas       105 Oct 12 09:29 job.xml
[2025-10-12 12:39:22] -rw-r--r-- 2 boincer umatlas 221736341 Oct 12 09:29 EVNT.46676267._004331.pool.root.1
[2025-10-12 12:39:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:29 start_atlas.sh
[2025-10-12 12:39:22] drwxrwx--x 2 boincer umatlas      4096 Oct 12 09:29 shared
[2025-10-12 12:39:22] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 09:29 input.tar.gz
[2025-10-12 12:39:22] -rw-r--r-- 1 boincer umatlas         0 Oct 12 09:29 boinc_lockfile
[2025-10-12 12:39:22] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 09:29 pandaJob.out
[2025-10-12 12:39:22] -rw------- 1 boincer umatlas    975528 Oct 12 09:29 agis_schedconf.cvmfs.json
[2025-10-12 12:39:22] drwx------ 5 boincer umatlas      4096 Oct 12 09:29 pilot3
[2025-10-12 12:39:22] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 12:27 init_data.xml
[2025-10-12 12:39:22] -rw------- 1 boincer umatlas 196452869 Oct 12 12:38 HITS.46676269._072212.pool.root.1
[2025-10-12 12:39:22] -rw------- 1 boincer umatlas      1055 Oct 12 12:38 memory_monitor_summary.json
[2025-10-12 12:39:22] -rw-r--r-- 1 boincer umatlas       531 Oct 12 12:38 boinc_task_state.xml
[2025-10-12 12:39:22] -rw------- 1 boincer umatlas   1560580 Oct 12 12:38 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:39:22] -rw------- 1 boincer umatlas    433569 Oct 12 12:38 log.46676269._072212.job.log.tgz.1
[2025-10-12 12:39:22] -rw------- 1 boincer umatlas      7862 Oct 12 12:38 heartbeat.json
[2025-10-12 12:39:22] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 12:39 boinc_mmap_file
[2025-10-12 12:39:22] -rw-r--r-- 1 boincer umatlas        28 Oct 12 12:39 wrapper_checkpoint.txt
[2025-10-12 12:39:22] -rw------- 1 boincer umatlas        95 Oct 12 12:39 pilot_heartbeat.json
[2025-10-12 12:39:22] -rw------- 1 boincer umatlas      4891 Oct 12 12:39 pilotlog.txt
[2025-10-12 12:39:22] -rw------- 1 boincer umatlas   1586619 Oct 12 12:39 log.46676269._072212.job.log.1
[2025-10-12 12:39:22] -rw------- 1 boincer umatlas       357 Oct 12 12:39 output.list
[2025-10-12 12:39:22] -rw-r--r-- 1 boincer umatlas       620 Oct 12 12:39 runtime_log
[2025-10-12 12:39:22] -rw------- 1 boincer umatlas   2037760 Oct 12 12:39 result.tar.gz
[2025-10-12 12:39:22] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 12:39 runtime_log.err
[2025-10-12 12:39:22] -rw------- 1 boincer umatlas       662 Oct 12 12:39 KKpLDmzV4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEniNDmyiVTUo.diag
[2025-10-12 12:39:22] -rw-r--r-- 1 boincer umatlas     20858 Oct 12 12:39 stderr.txt
[2025-10-12 12:39:22] HITS file was successfully produced:
[2025-10-12 12:39:22] -rw------- 1 boincer umatlas 196452869 Oct 12 12:38 shared/HITS.pool.root.1
[2025-10-12 12:39:22]  *** Contents of shared directory: ***
[2025-10-12 12:39:22] total 410964
[2025-10-12 12:39:22] -rw-r--r-- 2 boincer umatlas 221736341 Oct 12 09:29 ATLAS.root_0
[2025-10-12 12:39:22] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:29 start_atlas.sh
[2025-10-12 12:39:22] -rw-r--r-- 2 boincer umatlas    569680 Oct 12 09:29 input.tar.gz
[2025-10-12 12:39:22] -rw------- 1 boincer umatlas 196452869 Oct 12 12:38 HITS.pool.root.1
[2025-10-12 12:39:22] -rw------- 1 boincer umatlas   2037760 Oct 12 12:39 result.tar.gz
12:39:23 (29606): run_atlas exited; CPU time 84665.228972
12:39:23 (29606): called boinc_finish(0)

</stderr_txt>
]]>

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