Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
09:36:10 (949424): wrapper (7.7.26015): starting
09:36:10 (949424): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 09:36:10] Arguments: --nthreads 12
[2025-10-12 09:36:10] Threads: 12
[2025-10-12 09:36:10] Checking for CVMFS
[2025-10-12 09:36:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:36:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:36:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:36:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:36:11] 2.13.2.0 14624 589 50968 151621 3 188 2510271 4096001 922 130560 0 2321805 99.998 24264 1588 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 09:36:11] CVMFS is ok
[2025-10-12 09:36:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:36:11] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 09:36:11] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 09:36:11] Further information can be found at the LHC@home message board.
[2025-10-12 09:36:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:36:11] Checking for apptainer binary...
[2025-10-12 09:36:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:36:11] Running /usr/bin/apptainer --version
[2025-10-12 09:36:11] apptainer version 1.4.3
[2025-10-12 09:36:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:36:11] zhiwei-Z790-Riptide-WiFi
[2025-10-12 09:36:11] apptainer works
[2025-10-12 09:36:11] Set ATHENA_PROC_NUMBER=12
[2025-10-12 09:36:11] Set ATHENA_CORE_NUMBER=12
[2025-10-12 09:36:11] Starting ATLAS job with PandaID=6839821951
[2025-10-12 09:36:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:00:25]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:00:25]  mtime=0
[2025-10-12 10:00:25]  protocol_id=None
[2025-10-12 10:00:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 10:00:25]  replicas=None
[2025-10-12 10:00:25]  scope=mc23_13p6TeV
[2025-10-12 10:00:25]  status=None
[2025-10-12 10:00:25]  status_code=0
[2025-10-12 10:00:25]  storage_token=
[2025-10-12 10:00:25]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6839821951/log.46676269._075272.job.log.tgz.1
[2025-10-12 10:00:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/e8/log.46676269._075272.job.log.tgz.1
[2025-10-12 10:00:25]  workdir=None
[2025-10-12 10:00:25] ]
[2025-10-12 10:00:25] 2025-10-12 13:59:31,195 | INFO     | transferring file log.46676269._075272.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6839821951/log.46676269._075272.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-12 10:00:25] 2025-10-12 13:59:31,195 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6839821951/log.46676269._075272.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._075272.job
[2025-10-12 10:00:25] 2025-10-12 13:59:31,205 | INFO     | adding to output.list: log.46676269._075272.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/e8/log.46676269._075272.job.log.tg
[2025-10-12 10:00:25] 2025-10-12 13:59:31,206 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 10:00:25] 2025-10-12 13:59:31,206 | INFO     | summary of transferred files:
[2025-10-12 10:00:25] 2025-10-12 13:59:31,206 | INFO     |  -- lfn=log.46676269._075272.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 10:00:25] 2025-10-12 13:59:31,206 | INFO     | stage-out finished correctly
[2025-10-12 10:00:25] 2025-10-12 13:59:32,534 | INFO     | time since job start (1396s) is within the limit (172800.0s)
[2025-10-12 10:00:25] 2025-10-12 13:59:33,362 | INFO     | monitor loop #111: job 0:6839821951 is in state 'finished'
[2025-10-12 10:00:25] 2025-10-12 13:59:33,362 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:00:25] 2025-10-12 13:59:33,886 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 10:00:25] 2025-10-12 13:59:34,540 | INFO     | time since job start (1398s) is within the limit (172800.0s)
[2025-10-12 10:00:25] 2025-10-12 13:59:35,865 | INFO     | monitor loop #112: job 0:6839821951 is in state 'finished'
[2025-10-12 10:00:25] 2025-10-12 13:59:35,865 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:00:25] 2025-10-12 13:59:36,127 | INFO     | job 6839821951 has state=finished
[2025-10-12 10:00:25] 2025-10-12 13:59:36,127 | INFO     | preparing for final server update for job 6839821951 in state='finished'
[2025-10-12 10:00:25] 2025-10-12 13:59:36,128 | INFO     | this job has now completed (state=finished)
[2025-10-12 10:00:25] 2025-10-12 13:59:36,128 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 10:00:25] 2025-10-12 13:59:36,128 | INFO     | log transfer has been attempted: DONE
[2025-10-12 10:00:25] 2025-10-12 13:59:36,128 | INFO     | job 6839821951 has finished - writing final server update
[2025-10-12 10:00:25] 2025-10-12 13:59:36,128 | INFO     | total number of processed events: 400 (read)
[2025-10-12 10:00:25] 2025-10-12 13:59:36,130 | INFO     | executing command: lscpu
[2025-10-12 10:00:25] 2025-10-12 13:59:36,144 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 10:00:25] 2025-10-12 13:59:36,545 | INFO     | time since job start (1400s) is within the limit (172800.0s)
[2025-10-12 10:00:25] 2025-10-12 13:59:37,433 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 10:00:25] 2025-10-12 13:59:37,435 | INFO     | found 24 cores (24 cores per socket, 1 socket) , CPU MHz: 3010.098593750001
[2025-10-12 10:00:25] 2025-10-12 13:59:37,438 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6839821951/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 10:00:25] 2025-10-12 13:59:37,438 | INFO     | extracted standard info from prmon json
[2025-10-12 10:00:25] 2025-10-12 13:59:37,438 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:00:25] 2025-10-12 13:59:37,438 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:00:25] 2025-10-12 13:59:37,438 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:00:25] 2025-10-12 13:59:37,438 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:00:25] 2025-10-12 13:59:37,439 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:00:25] 2025-10-12 13:59:37,439 | INFO     | sum of square deviations: 1265140.0
[2025-10-12 10:00:25] 2025-10-12 13:59:37,439 | INFO     | sum of deviations: 132451130.0
[2025-10-12 10:00:25] 2025-10-12 13:59:37,439 | INFO     | mean x: 1760276954.5
[2025-10-12 10:00:25] 2025-10-12 13:59:37,439 | INFO     | mean y: 2920833.125
[2025-10-12 10:00:25] 2025-10-12 13:59:37,439 | INFO     | -- intersect: -184285515020.99673
[2025-10-12 10:00:25] 2025-10-12 13:59:37,439 | INFO     | intersect: -184285515020.99673
[2025-10-12 10:00:25] 2025-10-12 13:59:37,439 | INFO     | chi2: 0.005188422922697554
[2025-10-12 10:00:25] 2025-10-12 13:59:37,439 | INFO     | -- intersect: -184285515020.99673
[2025-10-12 10:00:25] 2025-10-12 13:59:37,439 | INFO     | current memory leak: 104.69 B/s (using 16 data points, chi2=0.01)
[2025-10-12 10:00:25] 2025-10-12 13:59:37,439 | INFO     | could have reported an average CPU frequency of 3392 MHz (4 samples)
[2025-10-12 10:00:25] 2025-10-12 13:59:37,440 | INFO     | ..............................
[2025-10-12 10:00:25] 2025-10-12 13:59:37,440 | INFO     | . Timing measurements:
[2025-10-12 10:00:25] 2025-10-12 13:59:37,440 | INFO     | . get job = 0 s
[2025-10-12 10:00:25] 2025-10-12 13:59:37,440 | INFO     | . initial setup = 2 s
[2025-10-12 10:00:25] 2025-10-12 13:59:37,440 | INFO     | . payload setup = 1 s
[2025-10-12 10:00:25] 2025-10-12 13:59:37,440 | INFO     | . stage-in = 0 s
[2025-10-12 10:00:25] 2025-10-12 13:59:37,440 | INFO     | . payload execution = 1376 s
[2025-10-12 10:00:25] 2025-10-12 13:59:37,440 | INFO     | . stage-out = 0 s
[2025-10-12 10:00:25] 2025-10-12 13:59:37,440 | INFO     | . log creation = 0 s
[2025-10-12 10:00:25] 2025-10-12 13:59:37,440 | INFO     | ..............................
[2025-10-12 10:00:25] 2025-10-12 13:59:37,974 | INFO     | 
[2025-10-12 10:00:25] 2025-10-12 13:59:37,974 | INFO     | job summary report
[2025-10-12 10:00:25] 2025-10-12 13:59:37,974 | INFO     | --------------------------------------------------
[2025-10-12 10:00:25] 2025-10-12 13:59:37,974 | INFO     | PanDA job id: 6839821951
[2025-10-12 10:00:25] 2025-10-12 13:59:37,974 | INFO     | task id: 46676269
[2025-10-12 10:00:25] 2025-10-12 13:59:37,974 | INFO     | errors: (none)
[2025-10-12 10:00:25] 2025-10-12 13:59:37,974 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:00:25] 2025-10-12 13:59:37,974 | INFO     | pilot state: finished 
[2025-10-12 10:00:25] 2025-10-12 13:59:37,974 | INFO     | transexitcode: 0
[2025-10-12 10:00:25] 2025-10-12 13:59:37,974 | INFO     | exeerrorcode: 0
[2025-10-12 10:00:25] 2025-10-12 13:59:37,974 | INFO     | exeerrordiag: 
[2025-10-12 10:00:25] 2025-10-12 13:59:37,974 | INFO     | exitcode: 0
[2025-10-12 10:00:25] 2025-10-12 13:59:37,974 | INFO     | exitmsg: OK
[2025-10-12 10:00:25] 2025-10-12 13:59:37,974 | INFO     | cpuconsumptiontime: 14720 s
[2025-10-12 10:00:25] 2025-10-12 13:59:37,974 | INFO     | nevents: 400
[2025-10-12 10:00:25] 2025-10-12 13:59:37,974 | INFO     | neventsw: 0
[2025-10-12 10:00:25] 2025-10-12 13:59:37,975 | INFO     | pid: 959925
[2025-10-12 10:00:25] 2025-10-12 13:59:37,975 | INFO     | pgrp: 959925
[2025-10-12 10:00:25] 2025-10-12 13:59:37,975 | INFO     | corecount: 12
[2025-10-12 10:00:25] 2025-10-12 13:59:37,975 | INFO     | event service: False
[2025-10-12 10:00:25] 2025-10-12 13:59:37,975 | INFO     | sizes: {0: 2348856, 2: 2349118, 11: 2349146, 1381: 2373832, 1383: 2382830, 1386: 2382886, 1389: 2383208}
[2025-10-12 10:00:25] 2025-10-12 13:59:37,975 | INFO     | --------------------------------------------------
[2025-10-12 10:00:25] 2025-10-12 13:59:37,975 | INFO     | 
[2025-10-12 10:00:25] 2025-10-12 13:59:37,975 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-12 10:00:25] 2025-10-12 13:59:37,986 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:00:25] 2025-10-12 13:59:37,986 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:00:25] 2025-10-12 13:59:37,986 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:00:25] 2025-10-12 13:59:37,986 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:00:25] 2025-10-12 13:59:37,986 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:00:25] 2025-10-12 13:59:37,986 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:00:25] 2025-10-12 13:59:37,986 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:00:25] 2025-10-12 13:59:37,986 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:00:25] 2025-10-12 13:59:37,986 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:00:25] 2025-10-12 13:59:37,986 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:00:25] 2025-10-12 13:59:37,986 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:00:25] 2025-10-12 13:59:37,986 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:00:25] 2025-10-12 13:59:37,986 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:00:25] 2025-10-12 13:59:37,986 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:00:25] 2025-10-12 13:59:37,986 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:00:25] 2025-10-12 13:59:37,986 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:00:25] 2025-10-12 13:59:37,986 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:00:25] 2025-10-12 13:59:37,986 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:00:25] 2025-10-12 13:59:37,986 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:00:25] 2025-10-12 13:59:37,986 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:00:25] 2025-10-12 13:59:37,987 | INFO     | job 6839821951 has completed (purged errors)
[2025-10-12 10:00:25] 2025-10-12 13:59:37,987 | INFO     | overall cleanup function is called
[2025-10-12 10:00:25] 2025-10-12 13:59:38,993 | INFO     | --- collectZombieJob: --- 10, [959925]
[2025-10-12 10:00:25] 2025-10-12 13:59:38,993 | INFO     | zombie collector waiting for pid 959925
[2025-10-12 10:00:25] 2025-10-12 13:59:38,993 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:00:25] 2025-10-12 13:59:38,993 | INFO     | collected zombie processes
[2025-10-12 10:00:25] 2025-10-12 13:59:38,993 | INFO     | will attempt to kill all subprocesses of pid=959925
[2025-10-12 10:00:25] 2025-10-12 13:59:39,058 | INFO     | process IDs to be killed: [959925] (in reverse order)
[2025-10-12 10:00:25] 2025-10-12 13:59:39,084 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:00:25] 2025-10-12 13:59:39,084 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:00:25] 2025-10-12 13:59:39,087 | INFO     | did not find any defunct processes belonging to 959925
[2025-10-12 10:00:25] 2025-10-12 13:59:39,089 | INFO     | did not find any defunct processes belonging to 959925
[2025-10-12 10:00:25] 2025-10-12 13:59:39,089 | INFO     | ready for new job
[2025-10-12 10:00:25] 2025-10-12 13:59:39,089 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:00:25] 2025-10-12 13:59:39,089 | INFO     | ***************************************
[2025-10-12 10:00:25] 2025-10-12 13:59:39,089 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:00:25] 2025-10-12 13:59:39,089 | INFO     | ***************************************
[2025-10-12 10:00:25] 2025-10-12 13:59:39,089 | INFO     | 
[2025-10-12 10:00:25] 2025-10-12 13:59:39,090 | INFO     | architecture information:
[2025-10-12 10:00:25] 2025-10-12 13:59:39,090 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:00:25] 2025-10-12 13:59:39,096 | INFO     | cat /etc/os-release:
[2025-10-12 10:00:25] NAME="CentOS Linux"
[2025-10-12 10:00:25] VERSION="7 (Core)"
[2025-10-12 10:00:25] ID="centos"
[2025-10-12 10:00:25] ID_LIKE="rhel fedora"
[2025-10-12 10:00:25] VERSION_ID="7"
[2025-10-12 10:00:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:00:25] ANSI_COLOR="0;31"
[2025-10-12 10:00:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:00:25] HOME_URL="https://www.centos.org/"
[2025-10-12 10:00:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:00:25] 
[2025-10-12 10:00:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:00:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:00:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:00:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:00:25] 
[2025-10-12 10:00:25] 2025-10-12 13:59:39,096 | INFO     | ***************************************
[2025-10-12 10:00:25] 2025-10-12 13:59:39,599 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-12 10:00:25] 2025-10-12 13:59:39,607 | INFO     | sufficient remaining disk space (1819463909376 B)
[2025-10-12 10:00:25] 2025-10-12 13:59:39,607 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:00:25] 2025-10-12 13:59:39,608 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:00:25] 2025-10-12 13:59:39,608 | INFO     | update_server=False
[2025-10-12 10:00:25] 2025-10-12 13:59:39,608 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:00:25] 2025-10-12 13:59:39,608 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:00:25] 2025-10-12 13:59:39,608 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:00:25] 2025-10-12 13:59:39,608 | INFO     | aborting loop
[2025-10-12 10:00:25] 2025-10-12 13:59:39,919 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:00:25] 2025-10-12 13:59:39,936 | INFO     | all job control threads have been joined
[2025-10-12 10:00:25] 2025-10-12 13:59:40,105 | INFO     | all data control threads have been joined
[2025-10-12 10:00:25] 2025-10-12 13:59:40,224 | INFO     | all payload control threads have been joined
[2025-10-12 10:00:25] 2025-10-12 13:59:40,613 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:00:25] 2025-10-12 13:59:40,613 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:00:25] 2025-10-12 13:59:40,616 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:00:25] 2025-10-12 13:59:40,787 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:00:25] 2025-10-12 13:59:40,941 | INFO     | [job] control thread has finished
[2025-10-12 10:00:25] 2025-10-12 13:59:40,990 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:00:25] 2025-10-12 13:59:41,110 | INFO     | [data] control thread has finished
[2025-10-12 10:00:25] 2025-10-12 13:59:41,229 | INFO     | [payload] control thread has finished
[2025-10-12 10:00:25] 2025-10-12 13:59:41,303 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:00:25] 2025-10-12 13:59:41,613 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:00:25] 2025-10-12 13:59:41,728 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:00:25] 2025-10-12 13:59:41,895 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:00:25] 2025-10-12 13:59:41,928 | INFO     | [job] validate thread has finished
[2025-10-12 10:00:25] 2025-10-12 13:59:42,034 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:00:25] 2025-10-12 13:59:42,485 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:00:25] 2025-10-12 13:59:43,491 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:00:25] 2025-10-12 13:59:43,925 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:00:25] 2025-10-12 14:00:09,701 | INFO     | PID=953274 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 10:00:25] 2025-10-12 14:00:09,701 | INFO     | .. there are 2 such processes running
[2025-10-12 10:00:25] 2025-10-12 14:00:09,701 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:00:25] 2025-10-12 14:00:09,701 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:00:25] 2025-10-12 14:00:09,701 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:00:25] 2025-10-12 14:00:17,915 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:00:25] 2025-10-12 14:00:19,908 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132780126652224)>', '<ExcThread(monitor, started 132779626972928)>']
[2025-10-12 10:00:25] 2025-10-12 14:00:20,754 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:00:25] 2025-10-12 14:00:20,754 | INFO     | [monitor] control thread has ended
[2025-10-12 10:00:25] 2025-10-12 14:00:24,933 | INFO     | all workflow threads have been joined
[2025-10-12 10:00:25] 2025-10-12 14:00:24,933 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:00:25] 2025-10-12 14:00:24,933 | INFO     | traces error code: 0
[2025-10-12 10:00:25] 2025-10-12 14:00:24,933 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:00:25] 2025-10-12 14:00:24,976 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:00:25] 2025-10-12 14:00:24,977 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:00:25] 2025-10-12 14:00:24,978 [wrapper] pilotpid: 953274
[2025-10-12 10:00:25] 2025-10-12 14:00:24,979 [wrapper] Pilot exit status: 0
[2025-10-12 10:00:25] 2025-10-12 14:00:24,982 [wrapper] pandaids: 6839821951
[2025-10-12 10:00:25] 2025-10-12 14:00:24,997 [wrapper] cleanup supervisor_pilot  970300 953275
[2025-10-12 10:00:25] 2025-10-12 14:00:24,998 [wrapper] Test setup, not cleaning
[2025-10-12 10:00:25] 2025-10-12 14:00:24,999 [wrapper] apfmon messages muted
[2025-10-12 10:00:25] 2025-10-12 14:00:25,000 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:00:25] 2025-10-12 14:00:25,001 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:00:25]  *** Error codes and diagnostics ***
[2025-10-12 10:00:25]     "exeErrorCode": 0,
[2025-10-12 10:00:25]     "exeErrorDiag": "",
[2025-10-12 10:00:25]     "pilotErrorCode": 0,
[2025-10-12 10:00:25]     "pilotErrorDiag": "",
[2025-10-12 10:00:25]  *** Listing of results directory ***
[2025-10-12 10:00:25] total 413984
[2025-10-12 10:00:25] -rw-r--r-- 1 boinc boinc    557409 Oct 12 05:04 pilot3.tar.gz
[2025-10-12 10:00:25] -rw-r--r-- 1 boinc boinc      5112 Oct 12 05:21 queuedata.json
[2025-10-12 10:00:25] -rwx------ 1 boinc boinc     36292 Oct 12 05:24 runpilot2-wrapper.sh
[2025-10-12 10:00:25] -rw-r--r-- 1 boinc boinc       100 Oct 12 09:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:00:25] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 09:36 run_atlas
[2025-10-12 10:00:25] -rw-r--r-- 1 boinc boinc       105 Oct 12 09:36 job.xml
[2025-10-12 10:00:25] -rw-r--r-- 2 boinc boinc 221239706 Oct 12 09:36 EVNT.46676267._003571.pool.root.1
[2025-10-12 10:00:25] -rw-r--r-- 2 boinc boinc    569683 Oct 12 09:36 input.tar.gz
[2025-10-12 10:00:25] -rw-r--r-- 2 boinc boinc     15120 Oct 12 09:36 start_atlas.sh
[2025-10-12 10:00:25] drwxrwx--x 2 boinc boinc      4096 Oct 12 09:36 shared
[2025-10-12 10:00:25] -rw-r--r-- 1 boinc boinc         0 Oct 12 09:36 boinc_setup_complete
[2025-10-12 10:00:25] -rw-r--r-- 1 boinc boinc     11824 Oct 12 09:36 init_data.xml
[2025-10-12 10:00:25] -rw-r--r-- 1 boinc boinc         0 Oct 12 09:36 boinc_lockfile
[2025-10-12 10:00:25] -rw-r--r-- 1 boinc boinc      2549 Oct 12 09:36 pandaJob.out
[2025-10-12 10:00:25] -rw------- 1 boinc boinc    975528 Oct 12 09:36 agis_schedconf.cvmfs.json
[2025-10-12 10:00:25] -rw------- 1 boinc boinc   1560580 Oct 12 09:36 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:00:25] drwx------ 5 boinc boinc      4096 Oct 12 09:36 pilot3
[2025-10-12 10:00:25] -rw------- 1 boinc boinc 197600244 Oct 12 09:59 HITS.46676269._075272.pool.root.1
[2025-10-12 10:00:25] -rw------- 1 boinc boinc        95 Oct 12 09:59 pilot_heartbeat.json
[2025-10-12 10:00:25] -rw------- 1 boinc boinc      1014 Oct 12 09:59 memory_monitor_summary.json
[2025-10-12 10:00:25] -rw-r--r-- 1 boinc boinc       529 Oct 12 09:59 boinc_task_state.xml
[2025-10-12 10:00:25] -rw------- 1 boinc boinc    338508 Oct 12 09:59 log.46676269._075272.job.log.tgz.1
[2025-10-12 10:00:25] -rw------- 1 boinc boinc      7766 Oct 12 09:59 heartbeat.json
[2025-10-12 10:00:25] -rw-r--r-- 1 boinc boinc      8192 Oct 12 09:59 boinc_mmap_file
[2025-10-12 10:00:25] -rw-r--r-- 1 boinc boinc        27 Oct 12 09:59 wrapper_checkpoint.txt
[2025-10-12 10:00:25] -rw------- 1 boinc boinc      4824 Oct 12 10:00 pilotlog.txt
[2025-10-12 10:00:25] -rw------- 1 boinc boinc    246282 Oct 12 10:00 log.46676269._075272.job.log.1
[2025-10-12 10:00:25] -rw------- 1 boinc boinc       357 Oct 12 10:00 output.list
[2025-10-12 10:00:25] -rw-r--r-- 1 boinc boinc       620 Oct 12 10:00 runtime_log
[2025-10-12 10:00:25] -rw------- 1 boinc boinc    604160 Oct 12 10:00 result.tar.gz
[2025-10-12 10:00:25] -rw------- 1 boinc boinc       654 Oct 12 10:00 ZIiNDmBV7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmULjNDmI1At2n.diag
[2025-10-12 10:00:25] -rw-r--r-- 1 boinc boinc      8741 Oct 12 10:00 runtime_log.err
[2025-10-12 10:00:25] -rw-r--r-- 1 boinc boinc     21735 Oct 12 10:00 stderr.txt
[2025-10-12 10:00:25] HITS file was successfully produced:
[2025-10-12 10:00:25] -rw------- 1 boinc boinc 197600244 Oct 12 09:59 shared/HITS.pool.root.1
[2025-10-12 10:00:25]  *** Contents of shared directory: ***
[2025-10-12 10:00:25] total 410200
[2025-10-12 10:00:25] -rw-r--r-- 2 boinc boinc 221239706 Oct 12 09:36 ATLAS.root_0
[2025-10-12 10:00:25] -rw-r--r-- 2 boinc boinc    569683 Oct 12 09:36 input.tar.gz
[2025-10-12 10:00:25] -rw-r--r-- 2 boinc boinc     15120 Oct 12 09:36 start_atlas.sh
[2025-10-12 10:00:25] -rw------- 1 boinc boinc 197600244 Oct 12 09:59 HITS.pool.root.1
[2025-10-12 10:00:25] -rw------- 1 boinc boinc    604160 Oct 12 10:00 result.tar.gz
10:00:26 (949424): run_atlas exited; CPU time 14726.740448
10:00:26 (949424): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN