Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:31:50 (8836): wrapper (7.7.26015): starting
09:31:50 (8836): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 09:31:50] Arguments: --nthreads 12
[2025-10-12 09:31:50] Threads: 12
[2025-10-12 09:31:50] Checking for CVMFS
[2025-10-12 09:31:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:31:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:31:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:31:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:31:51] 2.11.2.0 3035 222899 95388 151621 0 57 15054195 20275201 1 130560 3 108233325 99.984 13654242 12616 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 09:31:51] CVMFS is ok
[2025-10-12 09:31:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:31:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:31:51] Further information can be found at the LHC@home message board.
[2025-10-12 09:31:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:31:51] Checking for apptainer binary...
[2025-10-12 09:31:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:31:51] Running /usr/bin/apptainer --version
[2025-10-12 09:31:51] apptainer version 1.3.2-1.el7
[2025-10-12 09:31:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:31:52] c-205-31.aglt2.org
[2025-10-12 09:31:52] apptainer works
[2025-10-12 09:31:52] Set ATHENA_PROC_NUMBER=12
[2025-10-12 09:31:52] Set ATHENA_CORE_NUMBER=12
[2025-10-12 09:31:52] Starting ATLAS job with PandaID=6839820806
[2025-10-12 09:31:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:43:20]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:43:20]  scope=mc23_13p6TeV
[2025-10-12 10:43:20]  status=None
[2025-10-12 10:43:20]  status_code=0
[2025-10-12 10:43:20]  storage_token=
[2025-10-12 10:43:20]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839820806/log.46676269._074872.job.log.tgz.1
[2025-10-12 10:43:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/31/log.46676269._074872.job.log.tgz.1
[2025-10-12 10:43:20]  workdir=None
[2025-10-12 10:43:20] ]
[2025-10-12 10:43:20] 2025-10-12 14:42:20,865 | INFO     | transferring file log.46676269._074872.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839820806/log.46676269._074872.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 10:43:20] 2025-10-12 14:42:20,865 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839820806/log.46676269._074872.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._074872.job
[2025-10-12 10:43:20] 2025-10-12 14:42:20,887 | INFO     | adding to output.list: log.46676269._074872.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/31/log.46676269._074872.job.log.tg
[2025-10-12 10:43:20] 2025-10-12 14:42:20,888 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 10:43:20] 2025-10-12 14:42:20,888 | INFO     | summary of transferred files:
[2025-10-12 10:43:20] 2025-10-12 14:42:20,888 | INFO     |  -- lfn=log.46676269._074872.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 10:43:20] 2025-10-12 14:42:20,889 | INFO     | stage-out finished correctly
[2025-10-12 10:43:20] 2025-10-12 14:42:21,619 | INFO     | monitor loop #314: job 0:6839820806 is in state 'finished'
[2025-10-12 10:43:20] 2025-10-12 14:42:21,619 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:43:20] 2025-10-12 14:42:22,027 | INFO     | time since job start (4215s) is within the limit (172800.0s)
[2025-10-12 10:43:20] 2025-10-12 14:42:22,504 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 10:43:20] 2025-10-12 14:42:22,587 | INFO     | job 6839820806 has state=finished
[2025-10-12 10:43:20] 2025-10-12 14:42:22,587 | INFO     | preparing for final server update for job 6839820806 in state='finished'
[2025-10-12 10:43:20] 2025-10-12 14:42:22,598 | INFO     | this job has now completed (state=finished)
[2025-10-12 10:43:20] 2025-10-12 14:42:22,598 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 10:43:20] 2025-10-12 14:42:22,599 | INFO     | log transfer has been attempted: DONE
[2025-10-12 10:43:20] 2025-10-12 14:42:22,599 | INFO     | job 6839820806 has finished - writing final server update
[2025-10-12 10:43:20] 2025-10-12 14:42:22,599 | INFO     | total number of processed events: 400 (read)
[2025-10-12 10:43:20] 2025-10-12 14:42:22,600 | INFO     | executing command: lscpu
[2025-10-12 10:43:20] 2025-10-12 14:42:22,626 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 10:43:20] 2025-10-12 14:42:23,148 | INFO     | PID=12558 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 10:43:20] 2025-10-12 14:42:24,122 | INFO     | monitor loop #315: job 0:6839820806 is in state 'finished'
[2025-10-12 10:43:20] 2025-10-12 14:42:24,123 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:43:20] 2025-10-12 14:42:24,148 | INFO     | time since job start (4217s) is within the limit (172800.0s)
[2025-10-12 10:43:20] 2025-10-12 14:42:26,154 | INFO     | time since job start (4219s) is within the limit (172800.0s)
[2025-10-12 10:43:20] 2025-10-12 14:42:26,626 | INFO     | monitor loop #316: job 0:6839820806 is in state 'finished'
[2025-10-12 10:43:20] 2025-10-12 14:42:26,626 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:43:20] 2025-10-12 14:42:28,159 | INFO     | time since job start (4221s) is within the limit (172800.0s)
[2025-10-12 10:43:20] 2025-10-12 14:42:28,476 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 10:43:20] 2025-10-12 14:42:28,480 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-12 10:43:20] 2025-10-12 14:42:28,483 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839820806/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 10:43:20] 2025-10-12 14:42:28,484 | INFO     | extracted standard info from prmon json
[2025-10-12 10:43:20] 2025-10-12 14:42:28,484 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:43:20] 2025-10-12 14:42:28,484 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:43:20] 2025-10-12 14:42:28,485 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:43:20] 2025-10-12 14:42:28,485 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:43:20] 2025-10-12 14:42:28,487 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:43:20] 2025-10-12 14:42:28,487 | INFO     | sum of square deviations: 73882315.5
[2025-10-12 10:43:20] 2025-10-12 14:42:28,487 | INFO     | sum of deviations: -6367598338.0
[2025-10-12 10:43:20] 2025-10-12 14:42:28,487 | INFO     | mean x: 1760278122.5
[2025-10-12 10:43:20] 2025-10-12 14:42:28,487 | INFO     | mean y: 2782674.6129032257
[2025-10-12 10:43:20] 2025-10-12 14:42:28,488 | INFO     | -- intersect: 151713567202.59323
[2025-10-12 10:43:20] 2025-10-12 14:42:28,488 | INFO     | intersect: 151713567202.59323
[2025-10-12 10:43:20] 2025-10-12 14:42:28,488 | INFO     | chi2: 0.08445920962180058
[2025-10-12 10:43:20] 2025-10-12 14:42:28,488 | INFO     | -- intersect: 151713567202.59323
[2025-10-12 10:43:20] 2025-10-12 14:42:28,488 | INFO     | current memory leak: -86.19 B/s (using 62 data points, chi2=0.08)
[2025-10-12 10:43:20] 2025-10-12 14:42:28,488 | INFO     | could have reported an average CPU frequency of 2037 MHz (6 samples)
[2025-10-12 10:43:20] 2025-10-12 14:42:28,489 | INFO     | ..............................
[2025-10-12 10:43:20] 2025-10-12 14:42:28,489 | INFO     | . Timing measurements:
[2025-10-12 10:43:20] 2025-10-12 14:42:28,489 | INFO     | . get job = 0 s
[2025-10-12 10:43:20] 2025-10-12 14:42:28,489 | INFO     | . initial setup = 2 s
[2025-10-12 10:43:20] 2025-10-12 14:42:28,489 | INFO     | . payload setup = 7 s
[2025-10-12 10:43:20] 2025-10-12 14:42:28,489 | INFO     | . stage-in = 0 s
[2025-10-12 10:43:20] 2025-10-12 14:42:28,489 | INFO     | . payload execution = 4184 s
[2025-10-12 10:43:20] 2025-10-12 14:42:28,489 | INFO     | . stage-out = 0 s
[2025-10-12 10:43:20] 2025-10-12 14:42:28,489 | INFO     | . log creation = 0 s
[2025-10-12 10:43:20] 2025-10-12 14:42:28,490 | INFO     | ..............................
[2025-10-12 10:43:20] 2025-10-12 14:42:28,611 | INFO     | 
[2025-10-12 10:43:20] 2025-10-12 14:42:28,611 | INFO     | job summary report
[2025-10-12 10:43:20] 2025-10-12 14:42:28,611 | INFO     | --------------------------------------------------
[2025-10-12 10:43:20] 2025-10-12 14:42:28,611 | INFO     | PanDA job id: 6839820806
[2025-10-12 10:43:20] 2025-10-12 14:42:28,611 | INFO     | task id: 46676269
[2025-10-12 10:43:20] 2025-10-12 14:42:28,611 | INFO     | errors: (none)
[2025-10-12 10:43:20] 2025-10-12 14:42:28,612 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:43:20] 2025-10-12 14:42:28,612 | INFO     | pilot state: finished 
[2025-10-12 10:43:20] 2025-10-12 14:42:28,612 | INFO     | transexitcode: 0
[2025-10-12 10:43:20] 2025-10-12 14:42:28,612 | INFO     | exeerrorcode: 0
[2025-10-12 10:43:20] 2025-10-12 14:42:28,612 | INFO     | exeerrordiag: 
[2025-10-12 10:43:20] 2025-10-12 14:42:28,612 | INFO     | exitcode: 0
[2025-10-12 10:43:20] 2025-10-12 14:42:28,612 | INFO     | exitmsg: OK
[2025-10-12 10:43:20] 2025-10-12 14:42:28,613 | INFO     | cpuconsumptiontime: 45155 s
[2025-10-12 10:43:20] 2025-10-12 14:42:28,613 | INFO     | nevents: 400
[2025-10-12 10:43:20] 2025-10-12 14:42:28,613 | INFO     | neventsw: 0
[2025-10-12 10:43:20] 2025-10-12 14:42:28,613 | INFO     | pid: 19253
[2025-10-12 10:43:20] 2025-10-12 14:42:28,613 | INFO     | pgrp: 19253
[2025-10-12 10:43:20] 2025-10-12 14:42:28,613 | INFO     | corecount: 12
[2025-10-12 10:43:20] 2025-10-12 14:42:28,613 | INFO     | event service: False
[2025-10-12 10:43:20] 2025-10-12 14:42:28,614 | INFO     | sizes: {0: 2348685, 1: 2348884, 6: 2349146, 11: 2349174, 4195: 2375022, 4196: 2375021, 4197: 2384203, 4199: 2384259, 4205: 2384453}
[2025-10-12 10:43:20] 2025-10-12 14:42:28,614 | INFO     | --------------------------------------------------
[2025-10-12 10:43:20] 2025-10-12 14:42:28,614 | INFO     | 
[2025-10-12 10:43:20] 2025-10-12 14:42:28,614 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 10:43:20] 2025-10-12 14:42:28,637 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:43:20] 2025-10-12 14:42:28,638 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:43:20] 2025-10-12 14:42:28,638 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:43:20] 2025-10-12 14:42:28,638 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:43:20] 2025-10-12 14:42:28,638 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:43:20] 2025-10-12 14:42:28,638 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:43:20] 2025-10-12 14:42:28,639 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:43:20] 2025-10-12 14:42:28,639 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:43:20] 2025-10-12 14:42:28,639 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:43:20] 2025-10-12 14:42:28,639 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:43:20] 2025-10-12 14:42:28,639 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:43:20] 2025-10-12 14:42:28,639 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:43:20] 2025-10-12 14:42:28,639 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:43:20] 2025-10-12 14:42:28,640 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:43:20] 2025-10-12 14:42:28,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:43:20] 2025-10-12 14:42:28,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:43:20] 2025-10-12 14:42:28,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:43:20] 2025-10-12 14:42:28,640 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:43:20] 2025-10-12 14:42:28,640 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:43:20] 2025-10-12 14:42:28,641 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:43:20] 2025-10-12 14:42:28,641 | INFO     | job 6839820806 has completed (purged errors)
[2025-10-12 10:43:20] 2025-10-12 14:42:28,641 | INFO     | overall cleanup function is called
[2025-10-12 10:43:20] 2025-10-12 14:42:29,649 | INFO     | --- collectZombieJob: --- 10, [19253]
[2025-10-12 10:43:20] 2025-10-12 14:42:29,649 | INFO     | zombie collector waiting for pid 19253
[2025-10-12 10:43:20] 2025-10-12 14:42:29,650 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:43:20] 2025-10-12 14:42:29,650 | INFO     | collected zombie processes
[2025-10-12 10:43:20] 2025-10-12 14:42:29,650 | INFO     | will attempt to kill all subprocesses of pid=19253
[2025-10-12 10:43:20] 2025-10-12 14:42:29,740 | INFO     | process IDs to be killed: [19253] (in reverse order)
[2025-10-12 10:43:20] 2025-10-12 14:42:29,791 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:43:20] 2025-10-12 14:42:29,792 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:43:20] 2025-10-12 14:42:29,795 | INFO     | did not find any defunct processes belonging to 19253
[2025-10-12 10:43:20] 2025-10-12 14:42:29,797 | INFO     | did not find any defunct processes belonging to 19253
[2025-10-12 10:43:20] 2025-10-12 14:42:29,797 | INFO     | ready for new job
[2025-10-12 10:43:20] 2025-10-12 14:42:29,798 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:43:20] 2025-10-12 14:42:29,799 | INFO     | ***************************************
[2025-10-12 10:43:20] 2025-10-12 14:42:29,799 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:43:20] 2025-10-12 14:42:29,799 | INFO     | ***************************************
[2025-10-12 10:43:20] 2025-10-12 14:42:29,799 | INFO     | 
[2025-10-12 10:43:20] 2025-10-12 14:42:29,800 | INFO     | architecture information:
[2025-10-12 10:43:20] 2025-10-12 14:42:29,801 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:43:20] 2025-10-12 14:42:29,815 | INFO     | cat /etc/os-release:
[2025-10-12 10:43:20] NAME="CentOS Linux"
[2025-10-12 10:43:20] VERSION="7 (Core)"
[2025-10-12 10:43:20] ID="centos"
[2025-10-12 10:43:20] ID_LIKE="rhel fedora"
[2025-10-12 10:43:20] VERSION_ID="7"
[2025-10-12 10:43:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:43:20] ANSI_COLOR="0;31"
[2025-10-12 10:43:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:43:20] HOME_URL="https://www.centos.org/"
[2025-10-12 10:43:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:43:20] 
[2025-10-12 10:43:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:43:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:43:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:43:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:43:20] 
[2025-10-12 10:43:20] 2025-10-12 14:42:29,815 | INFO     | ***************************************
[2025-10-12 10:43:20] 2025-10-12 14:42:30,317 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 10:43:20] 2025-10-12 14:42:30,334 | INFO     | sufficient remaining disk space (29369565184 B)
[2025-10-12 10:43:20] 2025-10-12 14:42:30,334 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:43:20] 2025-10-12 14:42:30,335 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:43:20] 2025-10-12 14:42:30,335 | INFO     | update_server=False
[2025-10-12 10:43:20] 2025-10-12 14:42:30,335 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:43:20] 2025-10-12 14:42:30,335 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:43:20] 2025-10-12 14:42:30,336 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:43:20] 2025-10-12 14:42:30,336 | INFO     | aborting loop
[2025-10-12 10:43:20] 2025-10-12 14:42:30,559 | INFO     | all data control threads have been joined
[2025-10-12 10:43:20] 2025-10-12 14:42:30,760 | INFO     | all payload control threads have been joined
[2025-10-12 10:43:20] 2025-10-12 14:42:31,337 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:43:20] 2025-10-12 14:42:31,340 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:43:20] 2025-10-12 14:42:31,341 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:43:20] 2025-10-12 14:42:31,488 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:43:20] 2025-10-12 14:42:31,557 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:43:20] 2025-10-12 14:42:31,565 | INFO     | [data] control thread has finished
[2025-10-12 10:43:20] 2025-10-12 14:42:31,567 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:43:20] 2025-10-12 14:42:31,764 | INFO     | [payload] control thread has finished
[2025-10-12 10:43:20] 2025-10-12 14:42:31,770 | INFO     | all job control threads have been joined
[2025-10-12 10:43:20] 2025-10-12 14:42:31,782 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:43:20] 2025-10-12 14:42:31,839 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:43:20] 2025-10-12 14:42:32,050 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:43:20] 2025-10-12 14:42:32,545 | INFO     | [job] validate thread has finished
[2025-10-12 10:43:20] 2025-10-12 14:42:32,773 | INFO     | [job] control thread has finished
[2025-10-12 10:43:20] 2025-10-12 14:42:32,829 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:43:20] 2025-10-12 14:42:33,095 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:43:20] 2025-10-12 14:42:33,494 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:43:20] 2025-10-12 14:42:37,101 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:43:20] 2025-10-12 14:42:41,325 | INFO     | job.realtimelogging is not enabled
[2025-10-12 10:43:20] 2025-10-12 14:42:42,330 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:43:20] 2025-10-12 14:43:01,361 | INFO     | PID=12558 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 10:43:20] 2025-10-12 14:43:01,361 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:43:20] 2025-10-12 14:43:01,361 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:43:20] 2025-10-12 14:43:01,361 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:43:20] 2025-10-12 14:43:13,904 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:43:20] 2025-10-12 14:43:14,750 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139878016497472)>', '<ExcThread(monitor, started 139876817172224)>']
[2025-10-12 10:43:20] 2025-10-12 14:43:15,422 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:43:20] 2025-10-12 14:43:15,422 | INFO     | [monitor] control thread has ended
[2025-10-12 10:43:20] 2025-10-12 14:43:19,770 | INFO     | all workflow threads have been joined
[2025-10-12 10:43:20] 2025-10-12 14:43:19,771 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:43:20] 2025-10-12 14:43:19,771 | INFO     | traces error code: 0
[2025-10-12 10:43:20] 2025-10-12 14:43:19,771 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:43:20] 2025-10-12 14:43:19,871 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:43:20] 2025-10-12 14:43:19,874 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:43:20] 2025-10-12 14:43:19,878 [wrapper] pilotpid: 12558
[2025-10-12 10:43:20] 2025-10-12 14:43:19,882 [wrapper] Pilot exit status: 0
[2025-10-12 10:43:20] 2025-10-12 14:43:19,897 [wrapper] pandaids: 6839820806
[2025-10-12 10:43:20] 2025-10-12 14:43:19,943 [wrapper] cleanup supervisor_pilot 32518 12559
[2025-10-12 10:43:20] 2025-10-12 14:43:19,947 [wrapper] Test setup, not cleaning
[2025-10-12 10:43:20] 2025-10-12 14:43:19,951 [wrapper] apfmon messages muted
[2025-10-12 10:43:20] 2025-10-12 14:43:19,955 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:43:20] 2025-10-12 14:43:19,959 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:43:20]  *** Error codes and diagnostics ***
[2025-10-12 10:43:20]     "exeErrorCode": 0,
[2025-10-12 10:43:20]     "exeErrorDiag": "",
[2025-10-12 10:43:20]     "pilotErrorCode": 0,
[2025-10-12 10:43:20]     "pilotErrorDiag": "",
[2025-10-12 10:43:20]  *** Listing of results directory ***
[2025-10-12 10:43:20] total 408460
[2025-10-12 10:43:20] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 04:52 pilot3.tar.gz
[2025-10-12 10:43:20] -rwx------ 1 boincer umatlas     36292 Oct 12 04:58 runpilot2-wrapper.sh
[2025-10-12 10:43:20] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 04:58 queuedata.json
[2025-10-12 10:43:20] -rw-r--r-- 1 boincer umatlas       100 Oct 12 09:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:43:20] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 09:31 run_atlas
[2025-10-12 10:43:20] -rw-r--r-- 1 boincer umatlas       105 Oct 12 09:31 job.xml
[2025-10-12 10:43:20] -rw-r--r-- 2 boincer umatlas 219953105 Oct 12 09:31 EVNT.46676267._003555.pool.root.1
[2025-10-12 10:43:20] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:31 start_atlas.sh
[2025-10-12 10:43:20] drwxrwx--x 2 boincer umatlas      4096 Oct 12 09:31 shared
[2025-10-12 10:43:20] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 09:31 input.tar.gz
[2025-10-12 10:43:20] -rw-r--r-- 1 boincer umatlas         0 Oct 12 09:31 boinc_lockfile
[2025-10-12 10:43:20] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 09:31 pandaJob.out
[2025-10-12 10:43:20] -rw------- 1 boincer umatlas    975528 Oct 12 09:32 agis_schedconf.cvmfs.json
[2025-10-12 10:43:20] -rw------- 1 boincer umatlas   1560580 Oct 12 09:32 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:43:20] drwx------ 5 boincer umatlas      4096 Oct 12 09:32 pilot3
[2025-10-12 10:43:20] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 10:40 init_data.xml
[2025-10-12 10:43:20] -rw------- 1 boincer umatlas 192415181 Oct 12 10:41 HITS.46676269._074872.pool.root.1
[2025-10-12 10:43:20] -rw------- 1 boincer umatlas        95 Oct 12 10:42 pilot_heartbeat.json
[2025-10-12 10:43:20] -rw------- 1 boincer umatlas      1049 Oct 12 10:42 memory_monitor_summary.json
[2025-10-12 10:43:20] -rw-r--r-- 1 boincer umatlas       529 Oct 12 10:42 boinc_task_state.xml
[2025-10-12 10:43:20] -rw------- 1 boincer umatlas    379334 Oct 12 10:42 log.46676269._074872.job.log.tgz.1
[2025-10-12 10:43:20] -rw------- 1 boincer umatlas      7853 Oct 12 10:42 heartbeat.json
[2025-10-12 10:43:20] -rw-r--r-- 1 boincer umatlas        27 Oct 12 10:43 wrapper_checkpoint.txt
[2025-10-12 10:43:20] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 10:43 boinc_mmap_file
[2025-10-12 10:43:20] -rw------- 1 boincer umatlas      4818 Oct 12 10:43 pilotlog.txt
[2025-10-12 10:43:20] -rw------- 1 boincer umatlas    616607 Oct 12 10:43 log.46676269._074872.job.log.1
[2025-10-12 10:43:20] -rw------- 1 boincer umatlas       357 Oct 12 10:43 output.list
[2025-10-12 10:43:20] -rw-r--r-- 1 boincer umatlas       620 Oct 12 10:43 runtime_log
[2025-10-12 10:43:20] -rw------- 1 boincer umatlas   1013760 Oct 12 10:43 result.tar.gz
[2025-10-12 10:43:20] -rw------- 1 boincer umatlas       659 Oct 12 10:43 IiFLDmH56R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8FjNDmbjyeOn.diag
[2025-10-12 10:43:20] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 10:43 runtime_log.err
[2025-10-12 10:43:20] -rw-r--r-- 1 boincer umatlas     22028 Oct 12 10:43 stderr.txt
[2025-10-12 10:43:20] HITS file was successfully produced:
[2025-10-12 10:43:20] -rw------- 1 boincer umatlas 192415181 Oct 12 10:41 shared/HITS.pool.root.1
[2025-10-12 10:43:20]  *** Contents of shared directory: ***
[2025-10-12 10:43:20] total 404280
[2025-10-12 10:43:20] -rw-r--r-- 2 boincer umatlas 219953105 Oct 12 09:31 ATLAS.root_0
[2025-10-12 10:43:20] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:31 start_atlas.sh
[2025-10-12 10:43:20] -rw-r--r-- 2 boincer umatlas    569675 Oct 12 09:31 input.tar.gz
[2025-10-12 10:43:20] -rw------- 1 boincer umatlas 192415181 Oct 12 10:41 HITS.pool.root.1
[2025-10-12 10:43:20] -rw------- 1 boincer umatlas   1013760 Oct 12 10:43 result.tar.gz
10:43:22 (8836): run_atlas exited; CPU time 45130.326568
10:43:22 (8836): called boinc_finish(0)

</stderr_txt>
]]>

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