Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:34:22 (25023): wrapper (7.7.26015): starting
09:34:22 (25023): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 09:34:22] Arguments: --nthreads 8
[2025-10-12 09:34:22] Threads: 8
[2025-10-12 09:34:22] Checking for CVMFS
[2025-10-12 09:34:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:34:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:34:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:34:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:34:23] 2.11.2.0 2791 194107 78064 151621 2 56 12853576 20275201 1 130560 1 68433550 99.976 8648007 24232 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 09:34:23] CVMFS is ok
[2025-10-12 09:34:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:34:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:34:23] Further information can be found at the LHC@home message board.
[2025-10-12 09:34:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:34:23] Checking for apptainer binary...
[2025-10-12 09:34:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:34:23] Running /usr/bin/apptainer --version
[2025-10-12 09:34:23] apptainer version 1.3.2-1.el7
[2025-10-12 09:34:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:34:25] c-204-3.aglt2.org
[2025-10-12 09:34:25] apptainer works
[2025-10-12 09:34:25] Set ATHENA_PROC_NUMBER=8
[2025-10-12 09:34:25] Set ATHENA_CORE_NUMBER=8
[2025-10-12 09:34:25] Starting ATLAS job with PandaID=6839591611
[2025-10-12 09:34:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:42:00]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:42:00] 2025-10-12 15:41:12,541 | INFO     | monitor loop #558: job 0:6839591611 is in state 'finished'
[2025-10-12 11:42:00] 2025-10-12 15:41:12,542 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 11:42:00] 2025-10-12 15:41:12,984 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 11:42:00] 2025-10-12 15:41:12,988 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-10-12 11:42:00] 2025-10-12 15:41:12,991 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839591611/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:42:00] 2025-10-12 15:41:12,992 | INFO     | extracted standard info from prmon json
[2025-10-12 11:42:00] 2025-10-12 15:41:12,992 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 11:42:00] 2025-10-12 15:41:12,992 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 11:42:00] 2025-10-12 15:41:12,993 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:42:00] 2025-10-12 15:41:12,993 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:42:00] 2025-10-12 15:41:12,996 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:42:00] 2025-10-12 15:41:12,997 | INFO     | sum of square deviations: 591173875.0
[2025-10-12 11:42:00] 2025-10-12 15:41:12,997 | INFO     | sum of deviations: 3189729619.5000024
[2025-10-12 11:42:00] 2025-10-12 15:41:12,997 | INFO     | mean x: 1760279865.5
[2025-10-12 11:42:00] 2025-10-12 15:41:12,997 | INFO     | mean y: 2516846.2661290322
[2025-10-12 11:42:00] 2025-10-12 15:41:12,998 | INFO     | -- intersect: -9495224957.014387
[2025-10-12 11:42:00] 2025-10-12 15:41:12,998 | INFO     | intersect: -9495224957.014387
[2025-10-12 11:42:00] 2025-10-12 15:41:12,998 | INFO     | chi2: 1.6810703029395415
[2025-10-12 11:42:00] 2025-10-12 15:41:12,998 | INFO     | sum of square deviations: 522502820.0
[2025-10-12 11:42:00] 2025-10-12 15:41:12,999 | INFO     | sum of deviations: 3277587827.999992
[2025-10-12 11:42:00] 2025-10-12 15:41:12,999 | INFO     | mean x: 1760279713.0
[2025-10-12 11:42:00] 2025-10-12 15:41:12,999 | INFO     | mean y: 2517041.487394958
[2025-10-12 11:42:00] 2025-10-12 15:41:12,999 | INFO     | -- intersect: -11039473815.526773
[2025-10-12 11:42:00] 2025-10-12 15:41:12,999 | INFO     | intersect: -11039473815.526773
[2025-10-12 11:42:00] 2025-10-12 15:41:13,000 | INFO     | chi2: 1.6831232343776135
[2025-10-12 11:42:00] 2025-10-12 15:41:13,000 | INFO     | current chi2=1.6831232343776135 (change=-0.12212049873715364 %)
[2025-10-12 11:42:00] 2025-10-12 15:41:13,000 | INFO     | right removable region: 118
[2025-10-12 11:42:00] 2025-10-12 15:41:13,000 | INFO     | sum of square deviations: 522502820.0
[2025-10-12 11:42:00] 2025-10-12 15:41:13,001 | INFO     | sum of deviations: -16514040414.0
[2025-10-12 11:42:00] 2025-10-12 15:41:13,001 | INFO     | mean x: 1760280018.0
[2025-10-12 11:42:00] 2025-10-12 15:41:13,001 | INFO     | mean y: 2559859.100840336
[2025-10-12 11:42:00] 2025-10-12 15:41:13,001 | INFO     | -- intersect: 55637351183.68861
[2025-10-12 11:42:00] 2025-10-12 15:41:13,001 | INFO     | intersect: 55637351183.68861
[2025-10-12 11:42:00] 2025-10-12 15:41:13,001 | INFO     | chi2: 0.12107812943562676
[2025-10-12 11:42:00] 2025-10-12 15:41:13,002 | INFO     | current chi2=0.12107812943562676 (change=92.79755705493649 %)
[2025-10-12 11:42:00] 2025-10-12 15:41:13,002 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 11:42:00] 2025-10-12 15:41:13,002 | INFO     | sum of deviations: -14624970362.5
[2025-10-12 11:42:00] 2025-10-12 15:41:13,002 | INFO     | mean x: 1760280170.5
[2025-10-12 11:42:00] 2025-10-12 15:41:13,003 | INFO     | mean y: 2555192.5701754387
[2025-10-12 11:42:00] 2025-10-12 15:41:13,003 | INFO     | -- intersect: 56045020571.60073
[2025-10-12 11:42:00] 2025-10-12 15:41:13,003 | INFO     | intersect: 56045020571.60073
[2025-10-12 11:42:00] 2025-10-12 15:41:13,003 | INFO     | chi2: 0.10962296701801705
[2025-10-12 11:42:00] 2025-10-12 15:41:13,003 | INFO     | current chi2=0.10962296701801705 (change=9.460967452177272 %)
[2025-10-12 11:42:00] 2025-10-12 15:41:13,003 | INFO     | left removable region: 20
[2025-10-12 11:42:00] 2025-10-12 15:41:13,004 | INFO     | sum of square deviations: 291817564.5
[2025-10-12 11:42:00] 2025-10-12 15:41:13,004 | INFO     | sum of deviations: -6921638920.5
[2025-10-12 11:42:00] 2025-10-12 15:41:13,004 | INFO     | mean x: 1760280292.5
[2025-10-12 11:42:00] 2025-10-12 15:41:13,004 | INFO     | mean y: 2536435.8469387754
[2025-10-12 11:42:00] 2025-10-12 15:41:13,004 | INFO     | -- intersect: 41754733924.14146
[2025-10-12 11:42:00] 2025-10-12 15:41:13,005 | INFO     | intersect: 41754733924.14146
[2025-10-12 11:42:00] 2025-10-12 15:41:13,005 | INFO     | chi2: 0.08389400978582487
[2025-10-12 11:42:00] 2025-10-12 15:41:13,005 | INFO     | -- intersect: 41754733924.14146
[2025-10-12 11:42:00] 2025-10-12 15:41:13,005 | INFO     | current memory leak: -23.72 B/s (using 98 data points, chi2=0.08)
[2025-10-12 11:42:00] 2025-10-12 15:41:13,005 | INFO     | could have reported an average CPU frequency of 2003 MHz (8 samples)
[2025-10-12 11:42:00] 2025-10-12 15:41:13,006 | INFO     | ..............................
[2025-10-12 11:42:00] 2025-10-12 15:41:13,006 | INFO     | . Timing measurements:
[2025-10-12 11:42:00] 2025-10-12 15:41:13,006 | INFO     | . get job = 0 s
[2025-10-12 11:42:00] 2025-10-12 15:41:13,006 | INFO     | . initial setup = 2 s
[2025-10-12 11:42:00] 2025-10-12 15:41:13,006 | INFO     | . payload setup = 8 s
[2025-10-12 11:42:00] 2025-10-12 15:41:13,006 | INFO     | . stage-in = 0 s
[2025-10-12 11:42:00] 2025-10-12 15:41:13,006 | INFO     | . payload execution = 7551 s
[2025-10-12 11:42:00] 2025-10-12 15:41:13,006 | INFO     | . stage-out = 0 s
[2025-10-12 11:42:00] 2025-10-12 15:41:13,007 | INFO     | . log creation = 0 s
[2025-10-12 11:42:00] 2025-10-12 15:41:13,007 | INFO     | ..............................
[2025-10-12 11:42:00] 2025-10-12 15:41:13,097 | INFO     | 
[2025-10-12 11:42:00] 2025-10-12 15:41:13,097 | INFO     | job summary report
[2025-10-12 11:42:00] 2025-10-12 15:41:13,097 | INFO     | --------------------------------------------------
[2025-10-12 11:42:00] 2025-10-12 15:41:13,098 | INFO     | PanDA job id: 6839591611
[2025-10-12 11:42:00] 2025-10-12 15:41:13,098 | INFO     | task id: 46676269
[2025-10-12 11:42:00] 2025-10-12 15:41:13,098 | INFO     | errors: (none)
[2025-10-12 11:42:00] 2025-10-12 15:41:13,098 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:42:00] 2025-10-12 15:41:13,098 | INFO     | pilot state: finished 
[2025-10-12 11:42:00] 2025-10-12 15:41:13,098 | INFO     | transexitcode: 0
[2025-10-12 11:42:00] 2025-10-12 15:41:13,099 | INFO     | exeerrorcode: 0
[2025-10-12 11:42:00] 2025-10-12 15:41:13,099 | INFO     | exeerrordiag: 
[2025-10-12 11:42:00] 2025-10-12 15:41:13,099 | INFO     | exitcode: 0
[2025-10-12 11:42:00] 2025-10-12 15:41:13,099 | INFO     | exitmsg: OK
[2025-10-12 11:42:00] 2025-10-12 15:41:13,099 | INFO     | cpuconsumptiontime: 56828 s
[2025-10-12 11:42:00] 2025-10-12 15:41:13,099 | INFO     | nevents: 400
[2025-10-12 11:42:00] 2025-10-12 15:41:13,100 | INFO     | neventsw: 0
[2025-10-12 11:42:00] 2025-10-12 15:41:13,100 | INFO     | pid: 3674
[2025-10-12 11:42:00] 2025-10-12 15:41:13,100 | INFO     | pgrp: 3674
[2025-10-12 11:42:00] 2025-10-12 15:41:13,100 | INFO     | corecount: 8
[2025-10-12 11:42:00] 2025-10-12 15:41:13,100 | INFO     | event service: False
[2025-10-12 11:42:00] 2025-10-12 15:41:13,100 | INFO     | sizes: {0: 2348857, 1: 2348857, 6: 2349147, 11: 2349175, 7563: 2376720, 7564: 2376719, 7566: 2385901, 7567: 2385957, 7573: 2386151}
[2025-10-12 11:42:00] 2025-10-12 15:41:13,101 | INFO     | --------------------------------------------------
[2025-10-12 11:42:00] 2025-10-12 15:41:13,101 | INFO     | 
[2025-10-12 11:42:00] 2025-10-12 15:41:13,101 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 11:42:00] 2025-10-12 15:41:13,130 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:42:00] 2025-10-12 15:41:13,130 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:42:00] 2025-10-12 15:41:13,131 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:42:00] 2025-10-12 15:41:13,131 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:42:00] 2025-10-12 15:41:13,131 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:42:00] 2025-10-12 15:41:13,131 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:42:00] 2025-10-12 15:41:13,131 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:42:00] 2025-10-12 15:41:13,131 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:42:00] 2025-10-12 15:41:13,132 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:42:00] 2025-10-12 15:41:13,132 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:42:00] 2025-10-12 15:41:13,132 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:42:00] 2025-10-12 15:41:13,132 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:42:00] 2025-10-12 15:41:13,132 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:42:00] 2025-10-12 15:41:13,132 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:42:00] 2025-10-12 15:41:13,133 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:42:00] 2025-10-12 15:41:13,133 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:42:00] 2025-10-12 15:41:13,133 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:42:00] 2025-10-12 15:41:13,133 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:42:00] 2025-10-12 15:41:13,133 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:42:00] 2025-10-12 15:41:13,134 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:42:00] 2025-10-12 15:41:13,134 | INFO     | job 6839591611 has completed (purged errors)
[2025-10-12 11:42:00] 2025-10-12 15:41:13,134 | INFO     | overall cleanup function is called
[2025-10-12 11:42:00] 2025-10-12 15:41:14,142 | INFO     | --- collectZombieJob: --- 10, [3674]
[2025-10-12 11:42:00] 2025-10-12 15:41:14,142 | INFO     | zombie collector waiting for pid 3674
[2025-10-12 11:42:00] 2025-10-12 15:41:14,142 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:42:00] 2025-10-12 15:41:14,143 | INFO     | collected zombie processes
[2025-10-12 11:42:00] 2025-10-12 15:41:14,143 | INFO     | will attempt to kill all subprocesses of pid=3674
[2025-10-12 11:42:00] 2025-10-12 15:41:14,231 | INFO     | process IDs to be killed: [3674] (in reverse order)
[2025-10-12 11:42:00] 2025-10-12 15:41:14,290 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:42:00] 2025-10-12 15:41:14,290 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:42:00] 2025-10-12 15:41:14,294 | INFO     | did not find any defunct processes belonging to 3674
[2025-10-12 11:42:00] 2025-10-12 15:41:14,297 | INFO     | did not find any defunct processes belonging to 3674
[2025-10-12 11:42:00] 2025-10-12 15:41:14,297 | INFO     | ready for new job
[2025-10-12 11:42:00] 2025-10-12 15:41:14,298 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:42:00] 2025-10-12 15:41:14,300 | INFO     | ***************************************
[2025-10-12 11:42:00] 2025-10-12 15:41:14,300 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-12 11:42:00] 2025-10-12 15:41:14,300 | INFO     | ***************************************
[2025-10-12 11:42:00] 2025-10-12 15:41:14,300 | INFO     | 
[2025-10-12 11:42:00] 2025-10-12 15:41:14,301 | INFO     | architecture information:
[2025-10-12 11:42:00] 2025-10-12 15:41:14,301 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:42:00] 2025-10-12 15:41:14,320 | INFO     | cat /etc/os-release:
[2025-10-12 11:42:00] NAME="CentOS Linux"
[2025-10-12 11:42:00] VERSION="7 (Core)"
[2025-10-12 11:42:00] ID="centos"
[2025-10-12 11:42:00] ID_LIKE="rhel fedora"
[2025-10-12 11:42:00] VERSION_ID="7"
[2025-10-12 11:42:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:42:00] ANSI_COLOR="0;31"
[2025-10-12 11:42:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:42:00] HOME_URL="https://www.centos.org/"
[2025-10-12 11:42:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:42:00] 
[2025-10-12 11:42:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:42:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:42:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:42:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:42:00] 
[2025-10-12 11:42:00] 2025-10-12 15:41:14,320 | INFO     | ***************************************
[2025-10-12 11:42:00] 2025-10-12 15:41:14,824 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 11:42:00] 2025-10-12 15:41:14,844 | INFO     | sufficient remaining disk space (18591252480 B)
[2025-10-12 11:42:00] 2025-10-12 15:41:14,844 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:42:00] 2025-10-12 15:41:14,845 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:42:00] 2025-10-12 15:41:14,845 | INFO     | update_server=False
[2025-10-12 11:42:00] 2025-10-12 15:41:14,845 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:42:00] 2025-10-12 15:41:14,845 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:42:00] 2025-10-12 15:41:14,846 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:42:00] 2025-10-12 15:41:14,965 | INFO     | all payload control threads have been joined
[2025-10-12 11:42:00] 2025-10-12 15:41:15,045 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 11:42:00] 2025-10-12 15:41:15,045 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 11:42:00] 2025-10-12 15:41:15,045 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:42:00] 2025-10-12 15:41:15,046 | INFO     | will abort loop
[2025-10-12 11:42:00] 2025-10-12 15:41:15,373 | INFO     | all data control threads have been joined
[2025-10-12 11:42:00] 2025-10-12 15:41:15,847 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:42:00] 2025-10-12 15:41:15,852 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:42:00] 2025-10-12 15:41:15,971 | INFO     | [payload] control thread has finished
[2025-10-12 11:42:00] 2025-10-12 15:41:16,051 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:42:00] 2025-10-12 15:41:16,061 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:42:00] 2025-10-12 15:41:16,083 | INFO     | all job control threads have been joined
[2025-10-12 11:42:00] 2025-10-12 15:41:16,377 | INFO     | [data] control thread has finished
[2025-10-12 11:42:00] 2025-10-12 15:41:16,762 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:42:00] 2025-10-12 15:41:16,767 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:42:00] 2025-10-12 15:41:16,852 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:42:00] 2025-10-12 15:41:16,863 | INFO     | [job] validate thread has finished
[2025-10-12 11:42:00] 2025-10-12 15:41:16,936 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:42:00] 2025-10-12 15:41:16,974 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:42:00] 2025-10-12 15:41:17,084 | INFO     | [job] control thread has finished
[2025-10-12 11:42:00] 2025-10-12 15:41:17,305 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:42:00] 2025-10-12 15:41:17,343 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:42:00] 2025-10-12 15:41:17,735 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:42:00] 2025-10-12 15:41:21,741 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:42:00] 2025-10-12 15:41:44,820 | INFO     | PID=28689 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 11:42:00] 2025-10-12 15:41:44,821 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:42:00] 2025-10-12 15:41:44,821 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:42:00] 2025-10-12 15:41:44,821 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:42:00] 2025-10-12 15:41:54,546 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:42:00] 2025-10-12 15:41:55,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140064179226432)>', '<ExcThread(monitor, started 140063329457920)>']
[2025-10-12 11:42:00] 2025-10-12 15:41:55,867 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:42:00] 2025-10-12 15:41:55,868 | INFO     | [monitor] control thread has ended
[2025-10-12 11:42:00] 2025-10-12 15:42:00,432 | INFO     | all workflow threads have been joined
[2025-10-12 11:42:00] 2025-10-12 15:42:00,432 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:42:00] 2025-10-12 15:42:00,433 | INFO     | traces error code: 0
[2025-10-12 11:42:00] 2025-10-12 15:42:00,433 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:42:00] 2025-10-12 15:42:00,561 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:42:00] 2025-10-12 15:42:00,565 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:42:00] 2025-10-12 15:42:00,569 [wrapper] pilotpid: 28689
[2025-10-12 11:42:00] 2025-10-12 15:42:00,574 [wrapper] Pilot exit status: 0
[2025-10-12 11:42:00] 2025-10-12 15:42:00,595 [wrapper] pandaids: 6839591611
[2025-10-12 11:42:00] 2025-10-12 15:42:00,648 [wrapper] cleanup supervisor_pilot 15928 28690
[2025-10-12 11:42:00] 2025-10-12 15:42:00,653 [wrapper] Test setup, not cleaning
[2025-10-12 11:42:00] 2025-10-12 15:42:00,658 [wrapper] apfmon messages muted
[2025-10-12 11:42:00] 2025-10-12 15:42:00,664 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:42:00] 2025-10-12 15:42:00,669 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:42:00]  *** Error codes and diagnostics ***
[2025-10-12 11:42:00]     "exeErrorCode": 0,
[2025-10-12 11:42:00]     "exeErrorDiag": "",
[2025-10-12 11:42:00]     "pilotErrorCode": 0,
[2025-10-12 11:42:00]     "pilotErrorDiag": "",
[2025-10-12 11:42:00]  *** Listing of results directory ***
[2025-10-12 11:42:00] total 411196
[2025-10-12 11:42:00] -rw-r--r-- 1 boincer umatlas    563267 Oct  7 03:02 pilot3.tar.gz
[2025-10-12 11:42:00] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 02:38 queuedata.json
[2025-10-12 11:42:00] -rwx------ 1 boincer umatlas     36292 Oct 12 02:39 runpilot2-wrapper.sh
[2025-10-12 11:42:00] -rw-r--r-- 1 boincer umatlas       100 Oct 12 09:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:42:00] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 09:34 run_atlas
[2025-10-12 11:42:00] -rw-r--r-- 1 boincer umatlas       105 Oct 12 09:34 job.xml
[2025-10-12 11:42:00] -rw-r--r-- 2 boincer umatlas 219150405 Oct 12 09:34 EVNT.46676267._004518.pool.root.1
[2025-10-12 11:42:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:34 start_atlas.sh
[2025-10-12 11:42:00] drwxrwx--x 2 boincer umatlas      4096 Oct 12 09:34 shared
[2025-10-12 11:42:00] -rw-r--r-- 2 boincer umatlas    576709 Oct 12 09:34 input.tar.gz
[2025-10-12 11:42:00] -rw-r--r-- 1 boincer umatlas         0 Oct 12 09:34 boinc_lockfile
[2025-10-12 11:42:00] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 09:34 pandaJob.out
[2025-10-12 11:42:00] -rw------- 1 boincer umatlas    975528 Oct 12 09:34 agis_schedconf.cvmfs.json
[2025-10-12 11:42:00] -rw------- 1 boincer umatlas   1560580 Oct 12 09:34 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:42:00] drwx------ 4 boincer umatlas      4096 Oct 12 09:34 pilot3
[2025-10-12 11:42:00] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 11:37 init_data.xml
[2025-10-12 11:42:00] -rw------- 1 boincer umatlas 195156567 Oct 12 11:40 HITS.46676269._072875.pool.root.1
[2025-10-12 11:42:00] -rw-r--r-- 1 boincer umatlas       529 Oct 12 11:40 boinc_task_state.xml
[2025-10-12 11:42:00] -rw------- 1 boincer umatlas      1051 Oct 12 11:40 memory_monitor_summary.json
[2025-10-12 11:42:00] -rw------- 1 boincer umatlas    362143 Oct 12 11:41 log.46676269._072875.job.log.tgz.1
[2025-10-12 11:42:00] -rw------- 1 boincer umatlas      7847 Oct 12 11:41 heartbeat.json
[2025-10-12 11:42:00] -rw------- 1 boincer umatlas        95 Oct 12 11:41 pilot_heartbeat.json
[2025-10-12 11:42:00] -rw-r--r-- 1 boincer umatlas        27 Oct 12 11:41 wrapper_checkpoint.txt
[2025-10-12 11:42:00] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 11:42 boinc_mmap_file
[2025-10-12 11:42:00] -rw------- 1 boincer umatlas      4932 Oct 12 11:42 pilotlog.txt
[2025-10-12 11:42:00] -rw------- 1 boincer umatlas   1059990 Oct 12 11:42 log.46676269._072875.job.log.1
[2025-10-12 11:42:00] -rw------- 1 boincer umatlas       357 Oct 12 11:42 output.list
[2025-10-12 11:42:00] -rw-r--r-- 1 boincer umatlas       620 Oct 12 11:42 runtime_log
[2025-10-12 11:42:00] -rw------- 1 boincer umatlas   1443840 Oct 12 11:42 result.tar.gz
[2025-10-12 11:42:00] -rw-r--r-- 1 boincer umatlas      8698 Oct 12 11:42 runtime_log.err
[2025-10-12 11:42:00] -rw------- 1 boincer umatlas       658 Oct 12 11:42 ezfKDmGv4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6tiNDmYGtVan.diag
[2025-10-12 11:42:00] -rw-r--r-- 1 boincer umatlas     21100 Oct 12 11:42 stderr.txt
[2025-10-12 11:42:00] HITS file was successfully produced:
[2025-10-12 11:42:00] -rw------- 1 boincer umatlas 195156567 Oct 12 11:40 shared/HITS.pool.root.1
[2025-10-12 11:42:00]  *** Contents of shared directory: ***
[2025-10-12 11:42:00] total 406596
[2025-10-12 11:42:00] -rw-r--r-- 2 boincer umatlas 219150405 Oct 12 09:34 ATLAS.root_0
[2025-10-12 11:42:00] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:34 start_atlas.sh
[2025-10-12 11:42:00] -rw-r--r-- 2 boincer umatlas    576709 Oct 12 09:34 input.tar.gz
[2025-10-12 11:42:00] -rw------- 1 boincer umatlas 195156567 Oct 12 11:40 HITS.pool.root.1
[2025-10-12 11:42:00] -rw------- 1 boincer umatlas   1443840 Oct 12 11:42 result.tar.gz
11:42:01 (25023): run_atlas exited; CPU time 56772.742336
11:42:01 (25023): called boinc_finish(0)

</stderr_txt>
]]>

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