Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:52:33 (3250726): wrapper (7.7.26015): starting
06:52:33 (3250726): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 06:52:33] Arguments: --nthreads 12
[2025-10-12 06:52:33] Threads: 12
[2025-10-12 06:52:33] Checking for CVMFS
[2025-10-12 06:52:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 06:52:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 06:52:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 06:52:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 06:52:34] 2.11.5.0 2851 31539 152876 151621 1 646 35974764 45568001 19457 130560 0 316281830 99.865 134866730 26858 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-12 06:52:34] CVMFS is ok
[2025-10-12 06:52:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 06:52:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 06:52:34] Further information can be found at the LHC@home message board.
[2025-10-12 06:52:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 06:52:34] Checking for apptainer binary...
[2025-10-12 06:52:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 06:52:34] Running /usr/bin/apptainer --version
[2025-10-12 06:52:34] apptainer version 1.4.1-1.el9
[2025-10-12 06:52:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 06:52:35] wns0087.triumf.lcg
[2025-10-12 06:52:35] apptainer works
[2025-10-12 06:52:35] Set ATHENA_PROC_NUMBER=12
[2025-10-12 06:52:35] Set ATHENA_CORE_NUMBER=12
[2025-10-12 06:52:35] Starting ATLAS job with PandaID=6839927945
[2025-10-12 06:52:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 06:58:16]  *** The last 200 lines of the pilot log: ***
[2025-10-12 06:58:16] 2025-10-12 13:57:20,624 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 06:58:16] 2025-10-12 13:57:20,624 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 06:58:16] 2025-10-12 13:57:20,624 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | WARNING  | wrong length of table data, x=[1760277275.0], y=[1684.0] (must be same and length>=4)
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | could have reported an average CPU frequency of 2622 MHz (4 samples)
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | ..............................
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . Timing measurements:
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . get job = 0 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . initial setup = 5 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . payload setup = 23 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . stage-in = 0 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . payload execution = 42 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . stage-out = 0 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . log creation = 0 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | ..............................
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 06:58:16] 2025-10-12 13:57:20,626 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839927945/pilotlog.txt
[2025-10-12 06:58:16] 2025-10-12 13:57:20,678 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-12 06:58:16] - Log from pilotlog.txt -
[2025-10-12 06:58:16] 2025-10-12 13:57:20,623 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839927945/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 06:58:16] 2025-10-12 13:57:20,623 | INFO     | extracted standard info from prmon json
[2025-10-12 06:58:16] 2025-10-12 13:57:20,624 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 06:58:16] 2025-10-12 13:57:20,624 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 06:58:16] 2025-10-12 13:57:20,624 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 06:58:16] 2025-10-12 13:57:20,624 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | WARNING  | wrong length of table data, x=[1760277275.0], y=[1684.0] (must be same and length>=4)
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | could have reported an average CPU frequency of 2622 MHz (4 samples)
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | ..............................
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . Timing measurements:
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . get job = 0 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . initial setup = 5 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . payload setup = 23 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . stage-in = 0 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . payload execution = 42 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . stage-out = 0 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . log creation = 0 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | ..............................
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 06:58:16] 2025-10-12 13:57:20,626 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839927945/pilotlog.txt
[2025-10-12 06:58:16] 2025-10-12 13:57:20,679 | WARNING  | 
[2025-10-12 06:58:16] [begin log extracts]
[2025-10-12 06:58:16] - Log from pilotlog.txt -
[2025-10-12 06:58:16] 2025-10-12 13:57:20,623 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6839927945/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 06:58:16] 2025-10-12 13:57:20,623 | INFO     | extracted standard info from prmon json
[2025-10-12 06:58:16] 2025-10-12 13:57:20,624 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 06:58:16] 2025-10-12 13:57:20,624 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 06:58:16] 2025-10-12 13:57:20,624 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 06:58:16] 2025-10-12 13:57:20,624 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | WARNING  | wrong length of table data, x=[1760277275.0], y=[1684.0] (must be same and length>=4)
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | could have reported an average CPU frequency of 2622 MHz (4 samples)
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | ..............................
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . Timing measurements:
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . get job = 0 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . initial setup = 5 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . payload setup = 23 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . stage-in = 0 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . payload execution = 42 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . stage-out = 0 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | . log creation = 0 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | ..............................
[2025-10-12 06:58:16] 2025-10-12 13:57:20,625 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-12 06:58:16] 2025-10-12 13:57:20,626 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6839927945/pilotlog.txt
[2025-10-12 06:58:16] [end log extracts]
[2025-10-12 06:58:16] 2025-10-12 13:57:20,680 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-12 06:58:16] 2025-10-12 13:57:20,680 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-12 06:58:16] 2025-10-12 13:57:20,772 | INFO     | 
[2025-10-12 06:58:16] 2025-10-12 13:57:20,773 | INFO     | job summary report
[2025-10-12 06:58:16] 2025-10-12 13:57:20,773 | INFO     | --------------------------------------------------
[2025-10-12 06:58:16] 2025-10-12 13:57:20,773 | INFO     | PanDA job id: 6839927945
[2025-10-12 06:58:16] 2025-10-12 13:57:20,773 | INFO     | task id: 46676269
[2025-10-12 06:58:16] 2025-10-12 13:57:20,773 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-12 06:54:54,331 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-12 06:58:16] 2025-10-12 13:57:20,773 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 06:58:16] 2025-10-12 13:57:20,773 | INFO     | pilot state: failed 
[2025-10-12 06:58:16] 2025-10-12 13:57:20,773 | INFO     | transexitcode: 65
[2025-10-12 06:58:16] 2025-10-12 13:57:20,773 | INFO     | exeerrorcode: 65
[2025-10-12 06:58:16] 2025-10-12 13:57:20,773 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 06:58:16] 2025-10-12 13:57:20,773 | INFO     | exitcode: 65
[2025-10-12 06:58:16] 2025-10-12 13:57:20,773 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-12 06:58:16] 2025-10-12 13:57:20,773 | INFO     | cpuconsumptiontime: 18 s
[2025-10-12 06:58:16] 2025-10-12 13:57:20,773 | INFO     | nevents: 0
[2025-10-12 06:58:16] 2025-10-12 13:57:20,774 | INFO     | neventsw: 0
[2025-10-12 06:58:16] 2025-10-12 13:57:20,774 | INFO     | pid: 3268366
[2025-10-12 06:58:16] 2025-10-12 13:57:20,774 | INFO     | pgrp: 3268366
[2025-10-12 06:58:16] 2025-10-12 13:57:20,774 | INFO     | corecount: 12
[2025-10-12 06:58:16] 2025-10-12 13:57:20,774 | INFO     | event service: False
[2025-10-12 06:58:16] 2025-10-12 13:57:20,774 | INFO     | sizes: {0: 2348803, 1: 2348831, 12: 2348831, 18: 2349121, 23: 2349149, 70: 2372603, 72: 2376923, 208: 2377061}
[2025-10-12 06:58:16] 2025-10-12 13:57:20,774 | INFO     | --------------------------------------------------
[2025-10-12 06:58:16] 2025-10-12 13:57:20,775 | INFO     | 
[2025-10-12 06:58:16] 2025-10-12 13:57:20,775 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-12 06:58:16] 2025-10-12 13:57:20,795 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 06:58:16] 2025-10-12 13:57:20,796 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 06:58:16] 2025-10-12 13:57:20,796 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 06:58:16] 2025-10-12 13:57:20,796 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 06:58:16] 2025-10-12 13:57:20,796 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 06:58:16] 2025-10-12 13:57:20,796 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 06:58:16] 2025-10-12 13:57:20,796 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 06:58:16] 2025-10-12 13:57:20,796 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 06:58:16] 2025-10-12 13:57:20,796 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 06:58:16] 2025-10-12 13:57:20,796 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 06:58:16] 2025-10-12 13:57:20,796 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 06:58:16] 2025-10-12 13:57:20,796 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 06:58:16] 2025-10-12 13:57:20,796 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 06:58:16] 2025-10-12 13:57:20,796 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 06:58:16] 2025-10-12 13:57:20,796 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 06:58:16] 2025-10-12 13:57:20,796 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 06:58:16] 2025-10-12 13:57:20,796 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 06:58:16] 2025-10-12 13:57:20,796 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 06:58:16] 2025-10-12 13:57:20,796 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 06:58:16] 2025-10-12 13:57:20,796 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 06:58:16] 2025-10-12 13:57:20,797 | INFO     | job 6839927945 has completed (purged errors)
[2025-10-12 06:58:16] 2025-10-12 13:57:20,797 | INFO     | overall cleanup function is called
[2025-10-12 06:58:16] 2025-10-12 13:57:21,803 | INFO     | --- collectZombieJob: --- 10, [3268366]
[2025-10-12 06:58:16] 2025-10-12 13:57:21,803 | INFO     | zombie collector waiting for pid 3268366
[2025-10-12 06:58:16] 2025-10-12 13:57:21,803 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 06:58:16] 2025-10-12 13:57:21,803 | INFO     | collected zombie processes
[2025-10-12 06:58:16] 2025-10-12 13:57:21,803 | INFO     | will attempt to kill all subprocesses of pid=3268366
[2025-10-12 06:58:16] 2025-10-12 13:57:22,503 | INFO     | process IDs to be killed: [3268366] (in reverse order)
[2025-10-12 06:58:16] 2025-10-12 13:57:22,663 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 06:58:16] 2025-10-12 13:57:22,665 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 06:58:16] 2025-10-12 13:57:22,712 | INFO     | did not find any defunct processes belonging to 3268366
[2025-10-12 06:58:16] 2025-10-12 13:57:22,749 | INFO     | did not find any defunct processes belonging to 3268366
[2025-10-12 06:58:16] 2025-10-12 13:57:22,750 | INFO     | ready for new job
[2025-10-12 06:58:16] 2025-10-12 13:57:22,750 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 06:58:16] 2025-10-12 13:57:22,751 | INFO     | ***************************************
[2025-10-12 06:58:16] 2025-10-12 13:57:22,751 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 06:58:16] 2025-10-12 13:57:22,752 | INFO     | ***************************************
[2025-10-12 06:58:16] 2025-10-12 13:57:22,752 | INFO     | 
[2025-10-12 06:58:16] 2025-10-12 13:57:22,753 | INFO     | architecture information:
[2025-10-12 06:58:16] 2025-10-12 13:57:22,759 | INFO     | executing command: cat /etc/os-release
[2025-10-12 06:58:16] 2025-10-12 13:57:22,792 | INFO     | cat /etc/os-release:
[2025-10-12 06:58:16] NAME="CentOS Linux"
[2025-10-12 06:58:16] VERSION="7 (Core)"
[2025-10-12 06:58:16] ID="centos"
[2025-10-12 06:58:16] ID_LIKE="rhel fedora"
[2025-10-12 06:58:16] VERSION_ID="7"
[2025-10-12 06:58:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 06:58:16] ANSI_COLOR="0;31"
[2025-10-12 06:58:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 06:58:16] HOME_URL="https://www.centos.org/"
[2025-10-12 06:58:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 06:58:16] 
[2025-10-12 06:58:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 06:58:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 06:58:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 06:58:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 06:58:16] 
[2025-10-12 06:58:16] 2025-10-12 13:57:22,792 | INFO     | ***************************************
[2025-10-12 06:58:16] 2025-10-12 13:57:23,295 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-12 06:58:16] 2025-10-12 13:57:23,309 | INFO     | sufficient remaining disk space (1882914291712 B)
[2025-10-12 06:58:16] 2025-10-12 13:57:23,309 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 06:58:16] 2025-10-12 13:57:23,310 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 06:58:16] 2025-10-12 13:57:23,310 | INFO     | update_server=False
[2025-10-12 06:58:16] 2025-10-12 13:57:23,310 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 06:58:16] 2025-10-12 13:57:23,310 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 06:58:16] 2025-10-12 13:57:23,614 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:58:16] 2025-10-12 13:57:23,614 | INFO     | aborting loop
[2025-10-12 06:58:16] 2025-10-12 13:57:23,640 | INFO     | all payload control threads have been joined
[2025-10-12 06:58:16] 2025-10-12 13:57:23,954 | INFO     | all job control threads have been joined
[2025-10-12 06:58:16] 2025-10-12 13:57:24,221 | INFO     | all data control threads have been joined
[2025-10-12 06:58:16] 2025-10-12 13:57:24,317 | INFO     | [job] retrieve thread has finished
[2025-10-12 06:58:16] 2025-10-12 13:57:24,336 | INFO     | [data] copytool_in thread has finished
[2025-10-12 06:58:16] 2025-10-12 13:57:24,345 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 06:58:16] 2025-10-12 13:57:24,573 | INFO     | [payload] validate_post thread has finished
[2025-10-12 06:58:16] 2025-10-12 13:57:24,620 | INFO     | [job] job monitor thread has finished
[2025-10-12 06:58:16] 2025-10-12 13:57:24,646 | INFO     | [payload] control thread has finished
[2025-10-12 06:58:16] 2025-10-12 13:57:24,724 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 06:58:16] 2025-10-12 13:57:24,832 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 06:58:16] 2025-10-12 13:57:24,960 | INFO     | [job] control thread has finished
[2025-10-12 06:58:16] 2025-10-12 13:57:25,227 | INFO     | [data] control thread has finished
[2025-10-12 06:58:16] 2025-10-12 13:57:25,316 | INFO     | [data] copytool_out thread has finished
[2025-10-12 06:58:16] 2025-10-12 13:57:25,516 | INFO     | [payload] failed_post thread has finished
[2025-10-12 06:58:16] 2025-10-12 13:57:25,626 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 06:58:16] 2025-10-12 13:57:25,744 | INFO     | [job] validate thread has finished
[2025-10-12 06:58:16] 2025-10-12 13:57:25,786 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:58:16] 2025-10-12 13:57:26,460 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 06:58:16] 2025-10-12 13:57:26,792 | INFO     | [job] queue monitor thread has finished
[2025-10-12 06:58:16] 2025-10-12 13:57:30,469 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 06:58:16] 2025-10-12 13:57:52,117 | INFO     | PID=3256621 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 06:58:16] 2025-10-12 13:57:52,117 | INFO     | .. there are 35 such processes running
[2025-10-12 06:58:16] 2025-10-12 13:57:52,118 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 06:58:16] 2025-10-12 13:57:52,118 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 06:58:16] 2025-10-12 13:57:52,118 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 06:58:16] 2025-10-12 13:58:09,742 | INFO     | [monitor] cgroup control has ended
[2025-10-12 06:58:16] 2025-10-12 13:58:10,495 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139741499721536)>', '<ExcThread(monitor, started 139740955260672)>']
[2025-10-12 06:58:16] 2025-10-12 13:58:11,232 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 06:58:16] 2025-10-12 13:58:11,232 | INFO     | [monitor] control thread has ended
[2025-10-12 06:58:16] 2025-10-12 13:58:15,520 | INFO     | all workflow threads have been joined
[2025-10-12 06:58:16] 2025-10-12 13:58:15,520 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 06:58:16] 2025-10-12 13:58:15,520 | INFO     | traces error code: 0
[2025-10-12 06:58:16] 2025-10-12 13:58:15,521 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 06:58:16] 2025-10-12 13:58:15,935 [wrapper] ==== pilot stdout END ====
[2025-10-12 06:58:16] 2025-10-12 13:58:15,951 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 06:58:16] 2025-10-12 13:58:15,973 [wrapper] pilotpid: 3256621
[2025-10-12 06:58:16] 2025-10-12 13:58:15,980 [wrapper] Pilot exit status: 0
[2025-10-12 06:58:16] 2025-10-12 13:58:16,056 [wrapper] pandaids: 6839927945
[2025-10-12 06:58:16] 2025-10-12 13:58:16,148 [wrapper] cleanup supervisor_pilot 3256627 3256622
[2025-10-12 06:58:16] 2025-10-12 13:58:16,150 [wrapper] Test setup, not cleaning
[2025-10-12 06:58:16] 2025-10-12 13:58:16,152 [wrapper] apfmon messages muted
[2025-10-12 06:58:16] 2025-10-12 13:58:16,154 [wrapper] ==== wrapper stdout END ====
[2025-10-12 06:58:16] 2025-10-12 13:58:16,156 [wrapper] ==== wrapper stderr END ====
[2025-10-12 06:58:16]  *** Error codes and diagnostics ***
[2025-10-12 06:58:16]     "exeErrorCode": 65,
[2025-10-12 06:58:16]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 06:58:16]     "pilotErrorCode": 1305,
[2025-10-12 06:58:16]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-12 06:58:16]  *** Listing of results directory ***
[2025-10-12 06:58:16] total 218592
[2025-10-12 06:58:16] -rw-r--r--. 1 boinc boinc    557409 Oct 12 04:54 pilot3.tar.gz
[2025-10-12 06:58:16] -rw-r--r--. 1 boinc boinc      5112 Oct 12 04:58 queuedata.json
[2025-10-12 06:58:16] -rwx------. 1 boinc boinc     36292 Oct 12 04:59 runpilot2-wrapper.sh
[2025-10-12 06:58:16] -rw-r--r--. 1 boinc boinc       100 Oct 12 06:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 06:58:16] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 06:52 run_atlas
[2025-10-12 06:58:16] -rw-r--r--. 1 boinc boinc       105 Oct 12 06:52 job.xml
[2025-10-12 06:58:16] -rw-r--r--. 2 boinc boinc 219702524 Oct 12 06:52 EVNT.46676267._003711.pool.root.1
[2025-10-12 06:58:16] -rw-r--r--. 1 boinc boinc      6594 Oct 12 06:52 init_data.xml
[2025-10-12 06:58:16] -rw-r--r--. 2 boinc boinc     15120 Oct 12 06:52 start_atlas.sh
[2025-10-12 06:58:16] drwxrwx--x. 2 boinc boinc      4096 Oct 12 06:52 shared
[2025-10-12 06:58:16] -rw-r--r--. 2 boinc boinc    569682 Oct 12 06:52 input.tar.gz
[2025-10-12 06:58:16] -rw-r--r--. 1 boinc boinc         0 Oct 12 06:52 boinc_lockfile
[2025-10-12 06:58:16] -rw-r--r--. 1 boinc boinc      2549 Oct 12 06:52 pandaJob.out
[2025-10-12 06:58:16] -rw-------. 1 boinc boinc    975528 Oct 12 06:53 agis_schedconf.cvmfs.json
[2025-10-12 06:58:16] -rw-------. 1 boinc boinc   1560580 Oct 12 06:53 agis_ddmendpoints.agis.ALL.json
[2025-10-12 06:58:16] drwx------. 5 boinc boinc      4096 Oct 12 06:53 pilot3
[2025-10-12 06:58:16] -rw-------. 1 boinc boinc       989 Oct 12 06:54 memory_monitor_summary.json
[2025-10-12 06:58:16] -rw-------. 1 boinc boinc     22270 Oct 12 06:55 log.46676269._077484.job.log.tgz.1
[2025-10-12 06:58:16] -rw-------. 1 boinc boinc        95 Oct 12 06:57 pilot_heartbeat.json
[2025-10-12 06:58:16] -rw-------. 1 boinc boinc      8427 Oct 12 06:57 heartbeat.json
[2025-10-12 06:58:16] -rw-r--r--. 1 boinc boinc      8192 Oct 12 06:58 boinc_mmap_file
[2025-10-12 06:58:16] -rw-r--r--. 1 boinc boinc        22 Oct 12 06:58 wrapper_checkpoint.txt
[2025-10-12 06:58:16] -rw-r--r--. 1 boinc boinc       523 Oct 12 06:58 boinc_task_state.xml
[2025-10-12 06:58:16] -rw-------. 1 boinc boinc      4823 Oct 12 06:58 pilotlog.txt
[2025-10-12 06:58:16] -rw-------. 1 boinc boinc     93021 Oct 12 06:58 log.46676269._077484.job.log.1
[2025-10-12 06:58:16] -rw-------. 1 boinc boinc       188 Oct 12 06:58 output.list
[2025-10-12 06:58:16] -rw-r--r--. 1 boinc boinc       620 Oct 12 06:58 runtime_log
[2025-10-12 06:58:16] -rw-------. 1 boinc boinc    133120 Oct 12 06:58 result.tar.gz
[2025-10-12 06:58:16] -rw-r--r--. 1 boinc boinc      8528 Oct 12 06:58 runtime_log.err
[2025-10-12 06:58:16] -rw-------. 1 boinc boinc       645 Oct 12 06:58 ltxNDm6u9R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmjnTMDmdY4oem.diag
[2025-10-12 06:58:16] -rw-r--r--. 1 boinc boinc     21790 Oct 12 06:58 stderr.txt
[2025-10-12 06:58:16] No HITS result produced
[2025-10-12 06:58:16]  *** Contents of shared directory: ***
[2025-10-12 06:58:16] total 215268
[2025-10-12 06:58:16] -rw-r--r--. 2 boinc boinc 219702524 Oct 12 06:52 ATLAS.root_0
[2025-10-12 06:58:16] -rw-r--r--. 2 boinc boinc     15120 Oct 12 06:52 start_atlas.sh
[2025-10-12 06:58:16] -rw-r--r--. 2 boinc boinc    569682 Oct 12 06:52 input.tar.gz
[2025-10-12 06:58:16] -rw-------. 1 boinc boinc    133120 Oct 12 06:58 result.tar.gz
06:58:18 (3250726): run_atlas exited; CPU time 28.313011
06:58:18 (3250726): called boinc_finish(0)

</stderr_txt>
]]>

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