Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:29:03 (26426): wrapper (7.7.26015): starting
15:29:03 (26426): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:29:03] Arguments: --nthreads 8
[2025-10-12 15:29:03] Threads: 8
[2025-10-12 15:29:03] Checking for CVMFS
[2025-10-12 15:29:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:29:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:29:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:29:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:29:08] 2.11.2.0 15878 220468 145140 151621 2 11 21783802 25165825 4632 130560 0 105763097 99.849 67275320 3078 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 15:29:08] CVMFS is ok
[2025-10-12 15:29:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:29:08] Checking for apptainer binary...
[2025-10-12 15:29:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:29:08] Running /usr/bin/apptainer --version
[2025-10-12 15:29:08] apptainer version 1.3.2-1.el7
[2025-10-12 15:29:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:29:15] cg-vwn433.simple-grid.lan
[2025-10-12 15:29:15] apptainer works
[2025-10-12 15:29:15] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:29:15] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:29:16] Starting ATLAS job with PandaID=6839821875
[2025-10-12 15:29:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:42:30]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:42:30] 2025-10-12 17:41:45,427 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:42:30] 2025-10-12 17:41:45,427 | INFO     | sum of square deviations: 4286517580.0
[2025-10-12 19:42:30] 2025-10-12 17:41:45,430 | INFO     | sum of deviations: -7400790138.500004
[2025-10-12 19:42:30] 2025-10-12 17:41:45,430 | INFO     | mean x: 1760283493.5
[2025-10-12 19:42:30] 2025-10-12 17:41:45,430 | INFO     | mean y: 2486902.529166667
[2025-10-12 19:42:30] 2025-10-12 17:41:45,430 | INFO     | -- intersect: 3041664621.160881
[2025-10-12 19:42:30] 2025-10-12 17:41:45,430 | INFO     | intersect: 3041664621.160881
[2025-10-12 19:42:30] 2025-10-12 17:41:45,431 | INFO     | chi2: 2.372351102215557
[2025-10-12 19:42:30] 2025-10-12 17:41:45,431 | INFO     | sum of square deviations: 4024149870.0
[2025-10-12 19:42:30] 2025-10-12 17:41:45,433 | INFO     | sum of deviations: 8580511990.999989
[2025-10-12 19:42:30] 2025-10-12 17:41:45,433 | INFO     | mean x: 1760283341.0
[2025-10-12 19:42:30] 2025-10-12 17:41:45,434 | INFO     | mean y: 2496036.3829787234
[2025-10-12 19:42:30] 2025-10-12 17:41:45,434 | INFO     | -- intersect: -3750876179.5996284
[2025-10-12 19:42:30] 2025-10-12 17:41:45,434 | INFO     | intersect: -3750876179.5996284
[2025-10-12 19:42:30] 2025-10-12 17:41:45,434 | INFO     | chi2: 1.6041437490822241
[2025-10-12 19:42:30] 2025-10-12 17:41:45,434 | INFO     | current chi2=1.6041437490822241 (change=32.38168888306196 %)
[2025-10-12 19:42:30] 2025-10-12 17:41:45,435 | INFO     | sum of square deviations: 3772712597.5
[2025-10-12 19:42:30] 2025-10-12 17:41:45,444 | INFO     | sum of deviations: 8482629561.000009
[2025-10-12 19:42:30] 2025-10-12 17:41:45,444 | INFO     | mean x: 1760283188.5
[2025-10-12 19:42:30] 2025-10-12 17:41:45,444 | INFO     | mean y: 2495977.0086956522
[2025-10-12 19:42:30] 2025-10-12 17:41:45,445 | INFO     | -- intersect: -3955353931.9390664
[2025-10-12 19:42:30] 2025-10-12 17:41:45,445 | INFO     | intersect: -3955353931.9390664
[2025-10-12 19:42:30] 2025-10-12 17:41:45,445 | INFO     | chi2: 1.6046896580026528
[2025-10-12 19:42:30] 2025-10-12 17:41:45,445 | INFO     | current chi2=1.6046896580026528 (change=-0.03403117212787488 %)
[2025-10-12 19:42:30] 2025-10-12 17:41:45,445 | INFO     | right removable region: 229
[2025-10-12 19:42:30] 2025-10-12 17:41:45,446 | INFO     | sum of square deviations: 4024149870.0
[2025-10-12 19:42:30] 2025-10-12 17:41:45,448 | INFO     | sum of deviations: -42952302100.00001
[2025-10-12 19:42:30] 2025-10-12 17:41:45,448 | INFO     | mean x: 1760283646.0
[2025-10-12 19:42:30] 2025-10-12 17:41:45,448 | INFO     | mean y: 2507359.7404255318
[2025-10-12 19:42:30] 2025-10-12 17:41:45,448 | INFO     | -- intersect: 18791130394.96587
[2025-10-12 19:42:30] 2025-10-12 17:41:45,448 | INFO     | intersect: 18791130394.96587
[2025-10-12 19:42:30] 2025-10-12 17:41:45,449 | INFO     | chi2: 0.9358038492597786
[2025-10-12 19:42:30] 2025-10-12 17:41:45,449 | INFO     | current chi2=0.9358038492597786 (change=60.553737244633645 %)
[2025-10-12 19:42:30] 2025-10-12 17:41:45,449 | INFO     | sum of square deviations: 3772712597.5
[2025-10-12 19:42:30] 2025-10-12 17:41:45,451 | INFO     | sum of deviations: -40185025357.5
[2025-10-12 19:42:30] 2025-10-12 17:41:45,452 | INFO     | mean x: 1760283798.5
[2025-10-12 19:42:30] 2025-10-12 17:41:45,452 | INFO     | mean y: 2505649.1173913046
[2025-10-12 19:42:30] 2025-10-12 17:41:45,452 | INFO     | -- intersect: 18752157855.85931
[2025-10-12 19:42:30] 2025-10-12 17:41:45,452 | INFO     | intersect: 18752157855.85931
[2025-10-12 19:42:30] 2025-10-12 17:41:45,452 | INFO     | chi2: 0.9214704331035489
[2025-10-12 19:42:30] 2025-10-12 17:41:45,453 | INFO     | current chi2=0.9214704331035489 (change=1.5316688606877786 %)
[2025-10-12 19:42:30] 2025-10-12 17:41:45,453 | INFO     | left removable region: 20
[2025-10-12 19:42:30] 2025-10-12 17:41:45,453 | INFO     | sum of square deviations: 2830787960.0
[2025-10-12 19:42:30] 2025-10-12 17:41:45,455 | INFO     | sum of deviations: -8365226399.0
[2025-10-12 19:42:30] 2025-10-12 17:41:45,455 | INFO     | mean x: 1760283768.0
[2025-10-12 19:42:30] 2025-10-12 17:41:45,455 | INFO     | mean y: 2505209.889952153
[2025-10-12 19:42:30] 2025-10-12 17:41:45,455 | INFO     | -- intersect: 5204297945.296665
[2025-10-12 19:42:30] 2025-10-12 17:41:45,455 | INFO     | intersect: 5204297945.296665
[2025-10-12 19:42:30] 2025-10-12 17:41:45,456 | INFO     | chi2: 0.07334859992818127
[2025-10-12 19:42:30] 2025-10-12 17:41:45,456 | INFO     | -- intersect: 5204297945.296665
[2025-10-12 19:42:30] 2025-10-12 17:41:45,456 | INFO     | current memory leak: -2.96 B/s (using 209 data points, chi2=0.07)
[2025-10-12 19:42:30] 2025-10-12 17:41:45,457 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-12 19:42:30] 2025-10-12 17:41:45,457 | INFO     | ..............................
[2025-10-12 19:42:30] 2025-10-12 17:41:45,457 | INFO     | . Timing measurements:
[2025-10-12 19:42:30] 2025-10-12 17:41:45,457 | INFO     | . get job = 0 s
[2025-10-12 19:42:30] 2025-10-12 17:41:45,457 | INFO     | . initial setup = 7 s
[2025-10-12 19:42:30] 2025-10-12 17:41:45,457 | INFO     | . payload setup = 29 s
[2025-10-12 19:42:30] 2025-10-12 17:41:45,458 | INFO     | . stage-in = 0 s
[2025-10-12 19:42:30] 2025-10-12 17:41:45,458 | INFO     | . payload execution = 14608 s
[2025-10-12 19:42:30] 2025-10-12 17:41:45,458 | INFO     | . stage-out = 2 s
[2025-10-12 19:42:30] 2025-10-12 17:41:45,458 | INFO     | . log creation = 1 s
[2025-10-12 19:42:30] 2025-10-12 17:41:45,458 | INFO     | ..............................
[2025-10-12 19:42:30] 2025-10-12 17:41:45,612 | INFO     | 
[2025-10-12 19:42:30] 2025-10-12 17:41:45,612 | INFO     | job summary report
[2025-10-12 19:42:30] 2025-10-12 17:41:45,612 | INFO     | --------------------------------------------------
[2025-10-12 19:42:30] 2025-10-12 17:41:45,612 | INFO     | PanDA job id: 6839821875
[2025-10-12 19:42:30] 2025-10-12 17:41:45,612 | INFO     | task id: 46676269
[2025-10-12 19:42:30] 2025-10-12 17:41:45,612 | INFO     | errors: (none)
[2025-10-12 19:42:30] 2025-10-12 17:41:45,612 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:42:30] 2025-10-12 17:41:45,613 | INFO     | pilot state: finished 
[2025-10-12 19:42:30] 2025-10-12 17:41:45,613 | INFO     | transexitcode: 0
[2025-10-12 19:42:30] 2025-10-12 17:41:45,613 | INFO     | exeerrorcode: 0
[2025-10-12 19:42:30] 2025-10-12 17:41:45,613 | INFO     | exeerrordiag: 
[2025-10-12 19:42:30] 2025-10-12 17:41:45,613 | INFO     | exitcode: 0
[2025-10-12 19:42:30] 2025-10-12 17:41:45,613 | INFO     | exitmsg: OK
[2025-10-12 19:42:30] 2025-10-12 17:41:45,613 | INFO     | cpuconsumptiontime: 55358 s
[2025-10-12 19:42:30] 2025-10-12 17:41:45,613 | INFO     | nevents: 400
[2025-10-12 19:42:30] 2025-10-12 17:41:45,613 | INFO     | neventsw: 0
[2025-10-12 19:42:30] 2025-10-12 17:41:45,613 | INFO     | pid: 4702
[2025-10-12 19:42:30] 2025-10-12 17:41:45,614 | INFO     | pgrp: 4702
[2025-10-12 19:42:30] 2025-10-12 17:41:45,614 | INFO     | corecount: 8
[2025-10-12 19:42:30] 2025-10-12 17:41:45,614 | INFO     | event service: False
[2025-10-12 19:42:30] 2025-10-12 17:41:45,614 | INFO     | sizes: {0: 2348857, 1: 2348857, 11: 2348885, 22: 2348913, 33: 2348941, 44: 2348997, 54: 2349153, 65: 2349181, 76: 2349209, 86: 2349527, 87: 2349555, 14642: 2380082
[2025-10-12 19:42:30] 2025-10-12 17:41:45,614 | INFO     | --------------------------------------------------
[2025-10-12 19:42:30] 2025-10-12 17:41:45,614 | INFO     | 
[2025-10-12 19:42:30] 2025-10-12 17:41:45,614 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-10-12 19:42:30] 2025-10-12 17:41:46,135 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:42:30] 2025-10-12 17:41:46,135 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:42:30] 2025-10-12 17:41:46,135 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:42:30] 2025-10-12 17:41:46,135 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:42:30] 2025-10-12 17:41:46,136 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:42:30] 2025-10-12 17:41:46,136 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:42:30] 2025-10-12 17:41:46,136 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:42:30] 2025-10-12 17:41:46,136 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:42:30] 2025-10-12 17:41:46,136 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:42:30] 2025-10-12 17:41:46,136 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:42:30] 2025-10-12 17:41:46,136 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:42:30] 2025-10-12 17:41:46,136 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:42:30] 2025-10-12 17:41:46,136 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:42:30] 2025-10-12 17:41:46,136 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:42:30] 2025-10-12 17:41:46,136 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:42:30] 2025-10-12 17:41:46,137 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:42:30] 2025-10-12 17:41:46,137 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:42:30] 2025-10-12 17:41:46,137 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:42:30] 2025-10-12 17:41:46,137 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:42:30] 2025-10-12 17:41:46,137 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:42:30] 2025-10-12 17:41:46,137 | INFO     | job 6839821875 has completed (purged errors)
[2025-10-12 19:42:30] 2025-10-12 17:41:46,137 | INFO     | overall cleanup function is called
[2025-10-12 19:42:30] 2025-10-12 17:41:47,146 | INFO     | --- collectZombieJob: --- 10, [4702]
[2025-10-12 19:42:30] 2025-10-12 17:41:47,147 | INFO     | zombie collector waiting for pid 4702
[2025-10-12 19:42:30] 2025-10-12 17:41:47,147 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:42:30] 2025-10-12 17:41:47,147 | INFO     | collected zombie processes
[2025-10-12 19:42:30] 2025-10-12 17:41:47,147 | INFO     | will attempt to kill all subprocesses of pid=4702
[2025-10-12 19:42:30] 2025-10-12 17:41:47,317 | INFO     | process IDs to be killed: [4702] (in reverse order)
[2025-10-12 19:42:30] 2025-10-12 17:41:48,300 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:42:30] 2025-10-12 17:41:48,301 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:42:30] 2025-10-12 17:41:48,304 | INFO     | did not find any defunct processes belonging to 4702
[2025-10-12 19:42:30] 2025-10-12 17:41:48,307 | INFO     | did not find any defunct processes belonging to 4702
[2025-10-12 19:42:30] 2025-10-12 17:41:48,307 | INFO     | ready for new job
[2025-10-12 19:42:30] 2025-10-12 17:41:48,307 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:42:30] 2025-10-12 17:41:48,310 | INFO     | ***************************************
[2025-10-12 19:42:30] 2025-10-12 17:41:48,310 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:42:30] 2025-10-12 17:41:48,310 | INFO     | ***************************************
[2025-10-12 19:42:30] 2025-10-12 17:41:48,310 | INFO     | 
[2025-10-12 19:42:30] 2025-10-12 17:41:48,311 | INFO     | pilot is running in a VM
[2025-10-12 19:42:30] 2025-10-12 17:41:48,311 | INFO     | architecture information:
[2025-10-12 19:42:30] 2025-10-12 17:41:48,326 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:42:30] 2025-10-12 17:41:48,608 | INFO     | cat /etc/os-release:
[2025-10-12 19:42:30] NAME="CentOS Linux"
[2025-10-12 19:42:30] VERSION="7 (Core)"
[2025-10-12 19:42:30] ID="centos"
[2025-10-12 19:42:30] ID_LIKE="rhel fedora"
[2025-10-12 19:42:30] VERSION_ID="7"
[2025-10-12 19:42:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:42:30] ANSI_COLOR="0;31"
[2025-10-12 19:42:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:42:30] HOME_URL="https://www.centos.org/"
[2025-10-12 19:42:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:42:30] 
[2025-10-12 19:42:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:42:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:42:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:42:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:42:30] 
[2025-10-12 19:42:30] 2025-10-12 17:41:48,608 | INFO     | ***************************************
[2025-10-12 19:42:30] 2025-10-12 17:41:49,112 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-10-12 19:42:30] 2025-10-12 17:41:49,385 | INFO     | sufficient remaining disk space (496125345792 B)
[2025-10-12 19:42:30] 2025-10-12 17:41:49,385 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:42:30] 2025-10-12 17:41:49,386 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:42:30] 2025-10-12 17:41:49,386 | INFO     | update_server=False
[2025-10-12 19:42:30] 2025-10-12 17:41:49,386 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:42:30] 2025-10-12 17:41:49,546 | INFO     | all job control threads have been joined
[2025-10-12 19:42:30] 2025-10-12 17:41:49,701 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 19:42:30] 2025-10-12 17:41:49,702 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 19:42:30] 2025-10-12 17:41:49,702 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:42:30] 2025-10-12 17:41:49,702 | INFO     | will abort loop
[2025-10-12 19:42:30] 2025-10-12 17:41:49,965 | INFO     | all payload control threads have been joined
[2025-10-12 19:42:30] 2025-10-12 17:41:50,097 | INFO     | all data control threads have been joined
[2025-10-12 19:42:30] 2025-10-12 17:41:50,210 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:42:30] 2025-10-12 17:41:50,392 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:42:30] 2025-10-12 17:41:50,422 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:42:30] 2025-10-12 17:41:50,496 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:42:30] 2025-10-12 17:41:50,553 | INFO     | [job] control thread has finished
[2025-10-12 19:42:30] 2025-10-12 17:41:50,629 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:42:30] 2025-10-12 17:41:50,708 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:42:30] 2025-10-12 17:41:50,715 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:42:30] 2025-10-12 17:41:50,715 | INFO     | [job] validate thread has finished
[2025-10-12 19:42:30] 2025-10-12 17:41:50,972 | INFO     | [payload] control thread has finished
[2025-10-12 19:42:30] 2025-10-12 17:41:51,104 | INFO     | [data] control thread has finished
[2025-10-12 19:42:30] 2025-10-12 17:41:51,579 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:42:30] 2025-10-12 17:41:51,633 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:42:30] 2025-10-12 17:41:51,637 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:42:30] 2025-10-12 17:41:51,716 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:42:30] 2025-10-12 17:41:51,786 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:42:30] 2025-10-12 17:41:51,848 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:42:30] 2025-10-12 17:41:52,218 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:42:30] 2025-10-12 17:41:55,726 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:42:30] 2025-10-12 17:42:18,440 | INFO     | PID=30530 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 19:42:30] 2025-10-12 17:42:18,440 | INFO     | .. there are 9 such processes running
[2025-10-12 19:42:30] 2025-10-12 17:42:18,441 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:42:30] 2025-10-12 17:42:18,441 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:42:30] 2025-10-12 17:42:18,442 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:42:30] 2025-10-12 17:42:19,504 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:42:30] 2025-10-12 17:42:20,884 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140327620130624)>', '<ExcThread(monitor, started 140327016969984)>']
[2025-10-12 19:42:30] 2025-10-12 17:42:21,460 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:42:30] 2025-10-12 17:42:21,461 | INFO     | [monitor] control thread has ended
[2025-10-12 19:42:30] 2025-10-12 17:42:25,909 | INFO     | all workflow threads have been joined
[2025-10-12 19:42:30] 2025-10-12 17:42:25,910 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:42:30] 2025-10-12 17:42:25,910 | INFO     | traces error code: 0
[2025-10-12 19:42:30] 2025-10-12 17:42:25,910 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:42:30] 2025-10-12 17:42:26,353 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:42:30] 2025-10-12 17:42:26,397 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:42:30] 2025-10-12 17:42:26,463 [wrapper] pilotpid: 30530
[2025-10-12 19:42:30] 2025-10-12 17:42:26,509 [wrapper] Pilot exit status: 0
[2025-10-12 19:42:30] 2025-10-12 17:42:27,014 [wrapper] pandaids: 6839821875
[2025-10-12 19:42:30] 2025-10-12 17:42:27,711 [wrapper] cleanup supervisor_pilot 29414 30531
[2025-10-12 19:42:30] 2025-10-12 17:42:27,742 [wrapper] Test setup, not cleaning
[2025-10-12 19:42:30] 2025-10-12 17:42:27,799 [wrapper] apfmon messages muted
[2025-10-12 19:42:30] 2025-10-12 17:42:27,866 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:42:30] 2025-10-12 17:42:27,939 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:42:30]  *** Error codes and diagnostics ***
[2025-10-12 19:42:30]     "exeErrorCode": 0,
[2025-10-12 19:42:30]     "exeErrorDiag": "",
[2025-10-12 19:42:30]     "pilotErrorCode": 0,
[2025-10-12 19:42:30]     "pilotErrorDiag": "",
[2025-10-12 19:42:30]  *** Listing of results directory ***
[2025-10-12 19:42:30] total 413884
[2025-10-12 19:42:30] -rw-r--r--. 1 boinc boinc    557409 Oct 12 11:04 pilot3.tar.gz
[2025-10-12 19:42:30] -rwx------. 1 boinc boinc     36292 Oct 12 11:16 runpilot2-wrapper.sh
[2025-10-12 19:42:30] -rw-r--r--. 1 boinc boinc      5112 Oct 12 11:16 queuedata.json
[2025-10-12 19:42:30] -rw-r--r--. 1 boinc boinc       100 Oct 12 15:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:42:30] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 15:29 run_atlas
[2025-10-12 19:42:30] -rw-r--r--. 1 boinc boinc       105 Oct 12 15:29 job.xml
[2025-10-12 19:42:30] -rw-r--r--. 1 boinc boinc      6390 Oct 12 15:29 init_data.xml
[2025-10-12 19:42:30] -rw-r--r--. 2 boinc boinc 220300032 Oct 12 15:29 EVNT.46676267._003568.pool.root.1
[2025-10-12 19:42:30] -rw-r--r--. 2 boinc boinc     15120 Oct 12 15:29 start_atlas.sh
[2025-10-12 19:42:30] drwxrwx--x. 2 boinc boinc        68 Oct 12 15:29 shared
[2025-10-12 19:42:30] -rw-r--r--. 2 boinc boinc    569674 Oct 12 15:29 input.tar.gz
[2025-10-12 19:42:30] -rw-r--r--. 1 boinc boinc         0 Oct 12 15:29 boinc_lockfile
[2025-10-12 19:42:30] -rw-r--r--. 1 boinc boinc      2550 Oct 12 15:29 pandaJob.out
[2025-10-12 19:42:30] -rw-------. 1 boinc boinc    975528 Oct 12 15:32 agis_schedconf.cvmfs.json
[2025-10-12 19:42:30] drwx------. 5 boinc boinc      4096 Oct 12 15:32 pilot3
[2025-10-12 19:42:30] -rw-------. 1 boinc boinc 194690014 Oct 12 19:38 HITS.46676269._075196.pool.root.1
[2025-10-12 19:42:30] -rw-r--r--. 1 boinc boinc       531 Oct 12 19:39 boinc_task_state.xml
[2025-10-12 19:42:30] -rw-------. 1 boinc boinc      1018 Oct 12 19:39 memory_monitor_summary.json
[2025-10-12 19:42:30] -rw-------. 1 boinc boinc   1560580 Oct 12 19:39 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:42:30] -rw-------. 1 boinc boinc    461884 Oct 12 19:39 log.46676269._075196.job.log.tgz.1
[2025-10-12 19:42:30] -rw-------. 1 boinc boinc      7778 Oct 12 19:41 heartbeat.json
[2025-10-12 19:42:30] -rw-r--r--. 1 boinc boinc        28 Oct 12 19:41 wrapper_checkpoint.txt
[2025-10-12 19:42:30] -rw-r--r--. 1 boinc boinc      8192 Oct 12 19:41 boinc_mmap_file
[2025-10-12 19:42:30] -rw-------. 1 boinc boinc        95 Oct 12 19:42 pilot_heartbeat.json
[2025-10-12 19:42:30] -rw-------. 1 boinc boinc      5070 Oct 12 19:42 pilotlog.txt
[2025-10-12 19:42:30] -rw-------. 1 boinc boinc   2004433 Oct 12 19:42 log.46676269._075196.job.log.1
[2025-10-12 19:42:30] -rw-------. 1 boinc boinc       357 Oct 12 19:42 output.list
[2025-10-12 19:42:30] -rw-r--r--. 1 boinc boinc       620 Oct 12 19:42 runtime_log
[2025-10-12 19:42:30] -rw-------. 1 boinc boinc   2488320 Oct 12 19:42 result.tar.gz
[2025-10-12 19:42:30] -rw-r--r--. 1 boinc boinc      8703 Oct 12 19:42 runtime_log.err
[2025-10-12 19:42:30] -rw-------. 1 boinc boinc       657 Oct 12 19:42 qLiNDmCN7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHKjNDmaF1R7m.diag
[2025-10-12 19:42:30] -rw-r--r--. 1 boinc boinc     20633 Oct 12 19:42 stderr.txt
[2025-10-12 19:42:30] HITS file was successfully produced:
[2025-10-12 19:42:30] -rw-------. 1 boinc boinc 194690014 Oct 12 19:38 shared/HITS.pool.root.1
[2025-10-12 19:42:30]  *** Contents of shared directory: ***
[2025-10-12 19:42:30] total 408276
[2025-10-12 19:42:30] -rw-r--r--. 2 boinc boinc 220300032 Oct 12 15:29 ATLAS.root_0
[2025-10-12 19:42:30] -rw-r--r--. 2 boinc boinc     15120 Oct 12 15:29 start_atlas.sh
[2025-10-12 19:42:30] -rw-r--r--. 2 boinc boinc    569674 Oct 12 15:29 input.tar.gz
[2025-10-12 19:42:30] -rw-------. 1 boinc boinc 194690014 Oct 12 19:38 HITS.pool.root.1
[2025-10-12 19:42:30] -rw-------. 1 boinc boinc   2488320 Oct 12 19:42 result.tar.gz
19:42:31 (26426): run_atlas exited; CPU time 55556.803850
19:42:31 (26426): called boinc_finish(0)

</stderr_txt>
]]>

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