Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:26:54 (32478): wrapper (7.7.26015): starting
09:26:54 (32478): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 09:26:54] Arguments: --nthreads 8
[2025-10-12 09:26:54] Threads: 8
[2025-10-12 09:26:54] Checking for CVMFS
[2025-10-12 09:26:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:26:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:26:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:26:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:26:54] 2.11.2.0 26213 865 66180 151621 0 57 15164784 20275201 1 130560 0 657068 99.992 31741 40745 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 09:26:54] CVMFS is ok
[2025-10-12 09:26:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:26:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:26:54] Further information can be found at the LHC@home message board.
[2025-10-12 09:26:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:26:54] Checking for apptainer binary...
[2025-10-12 09:26:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:26:54] Running /usr/bin/apptainer --version
[2025-10-12 09:26:54] apptainer version 1.3.2-1.el7
[2025-10-12 09:26:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:26:56] c-115-4.aglt2.org
[2025-10-12 09:26:56] apptainer works
[2025-10-12 09:26:56] Set ATHENA_PROC_NUMBER=8
[2025-10-12 09:26:56] Set ATHENA_CORE_NUMBER=8
[2025-10-12 09:26:56] Starting ATLAS job with PandaID=6839822791
[2025-10-12 09:26:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:20:30]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:20:30] 2025-10-12 15:19:27,960 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1779.0
[2025-10-12 11:20:30] 2025-10-12 15:19:27,962 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839822791/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 11:20:30] 2025-10-12 15:19:27,963 | INFO     | extracted standard info from prmon json
[2025-10-12 11:20:30] 2025-10-12 15:19:27,963 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 11:20:30] 2025-10-12 15:19:27,963 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 11:20:30] 2025-10-12 15:19:27,963 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:20:30] 2025-10-12 15:19:27,964 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:20:30] 2025-10-12 15:19:27,966 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:20:30] 2025-10-12 15:19:27,966 | INFO     | sum of square deviations: 412686807.5
[2025-10-12 11:20:30] 2025-10-12 15:19:27,966 | INFO     | sum of deviations: -501941641.50000006
[2025-10-12 11:20:30] 2025-10-12 15:19:27,967 | INFO     | mean x: 1760278987.5
[2025-10-12 11:20:30] 2025-10-12 15:19:27,967 | INFO     | mean y: 2560697.536363636
[2025-10-12 11:20:30] 2025-10-12 15:19:27,967 | INFO     | -- intersect: 2143548265.8964403
[2025-10-12 11:20:30] 2025-10-12 15:19:27,967 | INFO     | intersect: 2143548265.8964403
[2025-10-12 11:20:30] 2025-10-12 15:19:27,967 | INFO     | chi2: 1.50051123406971
[2025-10-12 11:20:30] 2025-10-12 15:19:27,967 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 11:20:30] 2025-10-12 15:19:27,968 | INFO     | sum of deviations: -119083345.99999861
[2025-10-12 11:20:30] 2025-10-12 15:19:27,968 | INFO     | mean x: 1760278835.0
[2025-10-12 11:20:30] 2025-10-12 15:19:27,968 | INFO     | mean y: 2561783.1428571427
[2025-10-12 11:20:30] 2025-10-12 15:19:27,968 | INFO     | -- intersect: 586578890.0016028
[2025-10-12 11:20:30] 2025-10-12 15:19:27,968 | INFO     | intersect: 586578890.0016028
[2025-10-12 11:20:30] 2025-10-12 15:19:27,969 | INFO     | chi2: 1.502133075359288
[2025-10-12 11:20:30] 2025-10-12 15:19:27,969 | INFO     | current chi2=1.502133075359288 (change=-0.10808591450390632 %)
[2025-10-12 11:20:30] 2025-10-12 15:19:27,969 | INFO     | right removable region: 104
[2025-10-12 11:20:30] 2025-10-12 15:19:27,969 | INFO     | sum of square deviations: 358927660.0
[2025-10-12 11:20:30] 2025-10-12 15:19:27,969 | INFO     | sum of deviations: -15849079963.0
[2025-10-12 11:20:30] 2025-10-12 15:19:27,970 | INFO     | mean x: 1760279140.0
[2025-10-12 11:20:30] 2025-10-12 15:19:27,970 | INFO     | mean y: 2603265.257142857
[2025-10-12 11:20:30] 2025-10-12 15:19:27,970 | INFO     | -- intersect: 77730814145.02292
[2025-10-12 11:20:30] 2025-10-12 15:19:27,970 | INFO     | intersect: 77730814145.02292
[2025-10-12 11:20:30] 2025-10-12 15:19:27,970 | INFO     | chi2: 0.12869106326097957
[2025-10-12 11:20:30] 2025-10-12 15:19:27,970 | INFO     | current chi2=0.12869106326097957 (change=91.42351884217875 %)
[2025-10-12 11:20:30] 2025-10-12 15:19:27,970 | INFO     | sum of square deviations: 310052325.0
[2025-10-12 11:20:30] 2025-10-12 15:19:27,971 | INFO     | sum of deviations: -15770909469.5
[2025-10-12 11:20:30] 2025-10-12 15:19:27,971 | INFO     | mean x: 1760279292.5
[2025-10-12 11:20:30] 2025-10-12 15:19:27,971 | INFO     | mean y: 2602850.41
[2025-10-12 11:20:30] 2025-10-12 15:19:27,971 | INFO     | -- intersect: 89539765208.57974
[2025-10-12 11:20:30] 2025-10-12 15:19:27,971 | INFO     | intersect: 89539765208.57974
[2025-10-12 11:20:30] 2025-10-12 15:19:27,972 | INFO     | chi2: 0.10293795191749926
[2025-10-12 11:20:30] 2025-10-12 15:19:27,972 | INFO     | current chi2=0.10293795191749926 (change=20.011577098600995 %)
[2025-10-12 11:20:30] 2025-10-12 15:19:27,972 | INFO     | left removable region: 20
[2025-10-12 11:20:30] 2025-10-12 15:19:27,972 | INFO     | sum of square deviations: 183761585.0
[2025-10-12 11:20:30] 2025-10-12 15:19:27,972 | INFO     | sum of deviations: -9215002179.500002
[2025-10-12 11:20:30] 2025-10-12 15:19:27,973 | INFO     | mean x: 1760279414.5
[2025-10-12 11:20:30] 2025-10-12 15:19:27,973 | INFO     | mean y: 2584599.0595238097
[2025-10-12 11:20:30] 2025-10-12 15:19:27,973 | INFO     | -- intersect: 88274454049.61137
[2025-10-12 11:20:30] 2025-10-12 15:19:27,973 | INFO     | intersect: 88274454049.61137
[2025-10-12 11:20:30] 2025-10-12 15:19:27,973 | INFO     | chi2: 0.09102738319302094
[2025-10-12 11:20:30] 2025-10-12 15:19:27,973 | INFO     | -- intersect: 88274454049.61137
[2025-10-12 11:20:30] 2025-10-12 15:19:27,973 | INFO     | current memory leak: -50.15 B/s (using 84 data points, chi2=0.09)
[2025-10-12 11:20:30] 2025-10-12 15:19:27,974 | INFO     | could have reported an average CPU frequency of 2104 MHz (7 samples)
[2025-10-12 11:20:30] 2025-10-12 15:19:27,974 | INFO     | ..............................
[2025-10-12 11:20:30] 2025-10-12 15:19:27,974 | INFO     | . Timing measurements:
[2025-10-12 11:20:30] 2025-10-12 15:19:27,974 | INFO     | . get job = 0 s
[2025-10-12 11:20:30] 2025-10-12 15:19:27,974 | INFO     | . initial setup = 2 s
[2025-10-12 11:20:30] 2025-10-12 15:19:27,974 | INFO     | . payload setup = 8 s
[2025-10-12 11:20:30] 2025-10-12 15:19:27,974 | INFO     | . stage-in = 0 s
[2025-10-12 11:20:30] 2025-10-12 15:19:27,975 | INFO     | . payload execution = 6694 s
[2025-10-12 11:20:30] 2025-10-12 15:19:27,975 | INFO     | . stage-out = 0 s
[2025-10-12 11:20:30] 2025-10-12 15:19:27,975 | INFO     | . log creation = 0 s
[2025-10-12 11:20:30] 2025-10-12 15:19:27,975 | INFO     | ..............................
[2025-10-12 11:20:30] 2025-10-12 15:19:28,039 | INFO     | time since job start (6736s) is within the limit (172800.0s)
[2025-10-12 11:20:30] 2025-10-12 15:19:28,058 | INFO     | 
[2025-10-12 11:20:30] 2025-10-12 15:19:28,058 | INFO     | job summary report
[2025-10-12 11:20:30] 2025-10-12 15:19:28,059 | INFO     | --------------------------------------------------
[2025-10-12 11:20:30] 2025-10-12 15:19:28,059 | INFO     | PanDA job id: 6839822791
[2025-10-12 11:20:30] 2025-10-12 15:19:28,059 | INFO     | task id: 46676269
[2025-10-12 11:20:30] 2025-10-12 15:19:28,059 | INFO     | errors: (none)
[2025-10-12 11:20:30] 2025-10-12 15:19:28,059 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:20:30] 2025-10-12 15:19:28,060 | INFO     | pilot state: finished 
[2025-10-12 11:20:30] 2025-10-12 15:19:28,060 | INFO     | transexitcode: 0
[2025-10-12 11:20:30] 2025-10-12 15:19:28,060 | INFO     | exeerrorcode: 0
[2025-10-12 11:20:30] 2025-10-12 15:19:28,060 | INFO     | exeerrordiag: 
[2025-10-12 11:20:30] 2025-10-12 15:19:28,060 | INFO     | exitcode: 0
[2025-10-12 11:20:30] 2025-10-12 15:19:28,060 | INFO     | exitmsg: OK
[2025-10-12 11:20:30] 2025-10-12 15:19:28,061 | INFO     | cpuconsumptiontime: 49665 s
[2025-10-12 11:20:30] 2025-10-12 15:19:28,061 | INFO     | nevents: 400
[2025-10-12 11:20:30] 2025-10-12 15:19:28,061 | INFO     | neventsw: 0
[2025-10-12 11:20:30] 2025-10-12 15:19:28,061 | INFO     | pid: 12892
[2025-10-12 11:20:30] 2025-10-12 15:19:28,061 | INFO     | pgrp: 12892
[2025-10-12 11:20:30] 2025-10-12 15:19:28,061 | INFO     | corecount: 8
[2025-10-12 11:20:30] 2025-10-12 15:19:28,062 | INFO     | event service: False
[2025-10-12 11:20:30] 2025-10-12 15:19:28,062 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 6706: 2376288, 6707: 2385286, 6710: 2385470, 6718: 2385664}
[2025-10-12 11:20:30] 2025-10-12 15:19:28,062 | INFO     | --------------------------------------------------
[2025-10-12 11:20:30] 2025-10-12 15:19:28,062 | INFO     | 
[2025-10-12 11:20:30] 2025-10-12 15:19:28,062 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 11:20:30] 2025-10-12 15:19:28,093 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:20:30] 2025-10-12 15:19:28,093 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:20:30] 2025-10-12 15:19:28,093 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:20:30] 2025-10-12 15:19:28,094 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:20:30] 2025-10-12 15:19:28,094 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:20:30] 2025-10-12 15:19:28,094 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:20:30] 2025-10-12 15:19:28,094 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:20:30] 2025-10-12 15:19:28,094 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:20:30] 2025-10-12 15:19:28,095 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:20:30] 2025-10-12 15:19:28,095 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:20:30] 2025-10-12 15:19:28,095 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:20:30] 2025-10-12 15:19:28,095 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:20:30] 2025-10-12 15:19:28,095 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:20:30] 2025-10-12 15:19:28,095 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:20:30] 2025-10-12 15:19:28,096 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:20:30] 2025-10-12 15:19:28,096 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:20:30] 2025-10-12 15:19:28,096 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:20:30] 2025-10-12 15:19:28,096 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:20:30] 2025-10-12 15:19:28,096 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:20:30] 2025-10-12 15:19:28,097 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:20:30] 2025-10-12 15:19:28,097 | INFO     | job 6839822791 has completed (purged errors)
[2025-10-12 11:20:30] 2025-10-12 15:19:28,097 | INFO     | overall cleanup function is called
[2025-10-12 11:20:30] 2025-10-12 15:19:29,102 | INFO     | --- collectZombieJob: --- 10, [12892]
[2025-10-12 11:20:30] 2025-10-12 15:19:29,103 | INFO     | zombie collector waiting for pid 12892
[2025-10-12 11:20:30] 2025-10-12 15:19:29,103 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:20:30] 2025-10-12 15:19:29,103 | INFO     | collected zombie processes
[2025-10-12 11:20:30] 2025-10-12 15:19:29,103 | INFO     | will attempt to kill all subprocesses of pid=12892
[2025-10-12 11:20:30] 2025-10-12 15:19:29,222 | INFO     | PID=4607 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 11:20:30] 2025-10-12 15:19:29,254 | INFO     | process IDs to be killed: [12892] (in reverse order)
[2025-10-12 11:20:30] 2025-10-12 15:19:29,313 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:20:30] 2025-10-12 15:19:29,313 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:20:30] 2025-10-12 15:19:29,318 | INFO     | did not find any defunct processes belonging to 12892
[2025-10-12 11:20:30] 2025-10-12 15:19:29,322 | INFO     | did not find any defunct processes belonging to 12892
[2025-10-12 11:20:30] 2025-10-12 15:19:29,322 | INFO     | ready for new job
[2025-10-12 11:20:30] 2025-10-12 15:19:29,322 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:20:30] 2025-10-12 15:19:29,323 | INFO     | ***************************************
[2025-10-12 11:20:30] 2025-10-12 15:19:29,324 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:20:30] 2025-10-12 15:19:29,324 | INFO     | ***************************************
[2025-10-12 11:20:30] 2025-10-12 15:19:29,324 | INFO     | 
[2025-10-12 11:20:30] 2025-10-12 15:19:29,324 | INFO     | architecture information:
[2025-10-12 11:20:30] 2025-10-12 15:19:29,325 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:20:30] 2025-10-12 15:19:29,342 | INFO     | cat /etc/os-release:
[2025-10-12 11:20:30] NAME="CentOS Linux"
[2025-10-12 11:20:30] VERSION="7 (Core)"
[2025-10-12 11:20:30] ID="centos"
[2025-10-12 11:20:30] ID_LIKE="rhel fedora"
[2025-10-12 11:20:30] VERSION_ID="7"
[2025-10-12 11:20:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:20:30] ANSI_COLOR="0;31"
[2025-10-12 11:20:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:20:30] HOME_URL="https://www.centos.org/"
[2025-10-12 11:20:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:20:30] 
[2025-10-12 11:20:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:20:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:20:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:20:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:20:30] 
[2025-10-12 11:20:30] 2025-10-12 15:19:29,342 | INFO     | ***************************************
[2025-10-12 11:20:30] 2025-10-12 15:19:29,846 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 11:20:30] 2025-10-12 15:19:29,869 | INFO     | sufficient remaining disk space (18594398208 B)
[2025-10-12 11:20:30] 2025-10-12 15:19:29,870 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:20:30] 2025-10-12 15:19:29,870 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:20:30] 2025-10-12 15:19:29,871 | INFO     | update_server=False
[2025-10-12 11:20:30] 2025-10-12 15:19:29,871 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:20:30] 2025-10-12 15:19:29,871 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 11:20:30] 2025-10-12 15:19:29,872 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:20:30] 2025-10-12 15:19:29,872 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:20:30] 2025-10-12 15:19:29,872 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:20:30] 2025-10-12 15:19:29,873 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:20:30] 2025-10-12 15:19:29,873 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:20:30] 2025-10-12 15:19:29,999 | INFO     | all payload control threads have been joined
[2025-10-12 11:20:30] 2025-10-12 15:19:30,259 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 11:20:30] 2025-10-12 15:19:30,260 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 11:20:30] 2025-10-12 15:19:30,269 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:20:30] 2025-10-12 15:19:30,269 | INFO     | will abort loop
[2025-10-12 11:20:30] 2025-10-12 15:19:30,379 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:20:30] 2025-10-12 15:19:30,444 | INFO     | all data control threads have been joined
[2025-10-12 11:20:30] 2025-10-12 15:19:30,629 | INFO     | all job control threads have been joined
[2025-10-12 11:20:30] 2025-10-12 15:19:30,873 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:20:30] 2025-10-12 15:19:30,878 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:20:30] 2025-10-12 15:19:31,005 | INFO     | [payload] control thread has finished
[2025-10-12 11:20:30] 2025-10-12 15:19:31,129 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:20:30] 2025-10-12 15:19:31,275 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:20:30] 2025-10-12 15:19:31,277 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:20:30] 2025-10-12 15:19:31,367 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:20:30] 2025-10-12 15:19:31,378 | INFO     | [job] validate thread has finished
[2025-10-12 11:20:30] 2025-10-12 15:19:31,450 | INFO     | [data] control thread has finished
[2025-10-12 11:20:30] 2025-10-12 15:19:31,594 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:20:30] 2025-10-12 15:19:31,634 | INFO     | [job] control thread has finished
[2025-10-12 11:20:30] 2025-10-12 15:19:31,674 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:20:30] 2025-10-12 15:19:31,879 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:20:30] 2025-10-12 15:19:32,195 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:20:30] 2025-10-12 15:19:34,385 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:20:30] 2025-10-12 15:19:40,559 | INFO     | job.realtimelogging is not enabled
[2025-10-12 11:20:30] 2025-10-12 15:19:41,565 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:20:30] 2025-10-12 15:20:22,895 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:20:30] 2025-10-12 15:20:24,815 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140455094495040)>', '<ExcThread(monitor, started 140454272161536)>']
[2025-10-12 11:20:30] 2025-10-12 15:20:25,093 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:20:30] 2025-10-12 15:20:25,093 | INFO     | [monitor] control thread has ended
[2025-10-12 11:20:30] 2025-10-12 15:20:29,834 | INFO     | all workflow threads have been joined
[2025-10-12 11:20:30] 2025-10-12 15:20:29,835 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:20:30] 2025-10-12 15:20:29,835 | INFO     | traces error code: 0
[2025-10-12 11:20:30] 2025-10-12 15:20:29,836 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:20:30] 2025-10-12 15:20:29,950 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:20:30] 2025-10-12 15:20:29,954 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:20:30] 2025-10-12 15:20:29,959 [wrapper] pilotpid: 4607
[2025-10-12 11:20:30] 2025-10-12 15:20:29,964 [wrapper] Pilot exit status: 0
[2025-10-12 11:20:30] 2025-10-12 15:20:29,981 [wrapper] pandaids: 6839822791
[2025-10-12 11:20:30] 2025-10-12 15:20:30,032 [wrapper] cleanup supervisor_pilot  9426 4608
[2025-10-12 11:20:30] 2025-10-12 15:20:30,037 [wrapper] Test setup, not cleaning
[2025-10-12 11:20:30] 2025-10-12 15:20:30,042 [wrapper] apfmon messages muted
[2025-10-12 11:20:30] 2025-10-12 15:20:30,046 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:20:30] 2025-10-12 15:20:30,051 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:20:30]  *** Error codes and diagnostics ***
[2025-10-12 11:20:30]     "exeErrorCode": 0,
[2025-10-12 11:20:30]     "exeErrorDiag": "",
[2025-10-12 11:20:30]     "pilotErrorCode": 0,
[2025-10-12 11:20:30]     "pilotErrorDiag": "",
[2025-10-12 11:20:30]  *** Listing of results directory ***
[2025-10-12 11:20:30] total 412708
[2025-10-12 11:20:30] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 05:04 pilot3.tar.gz
[2025-10-12 11:20:30] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 05:31 queuedata.json
[2025-10-12 11:20:30] -rwx------ 1 boincer umatlas     36292 Oct 12 05:34 runpilot2-wrapper.sh
[2025-10-12 11:20:30] -rw-r--r-- 1 boincer umatlas       100 Oct 12 09:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:20:30] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 09:26 run_atlas
[2025-10-12 11:20:30] -rw-r--r-- 1 boincer umatlas       105 Oct 12 09:26 job.xml
[2025-10-12 11:20:30] -rw-r--r-- 2 boincer umatlas 221494999 Oct 12 09:26 EVNT.46676267._003583.pool.root.1
[2025-10-12 11:20:30] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:26 start_atlas.sh
[2025-10-12 11:20:30] drwxrwx--x 2 boincer umatlas      4096 Oct 12 09:26 shared
[2025-10-12 11:20:30] -rw-r--r-- 2 boincer umatlas    569685 Oct 12 09:26 input.tar.gz
[2025-10-12 11:20:30] -rw-r--r-- 1 boincer umatlas         0 Oct 12 09:26 boinc_lockfile
[2025-10-12 11:20:30] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 09:26 pandaJob.out
[2025-10-12 11:20:30] -rw------- 1 boincer umatlas    975528 Oct 12 09:27 agis_schedconf.cvmfs.json
[2025-10-12 11:20:30] -rw------- 1 boincer umatlas   1560580 Oct 12 09:27 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:20:30] drwx------ 5 boincer umatlas      4096 Oct 12 09:27 pilot3
[2025-10-12 11:20:30] -rw-r--r-- 1 boincer umatlas      5909 Oct 12 11:12 init_data.xml
[2025-10-12 11:20:30] -rw------- 1 boincer umatlas        95 Oct 12 11:18 pilot_heartbeat.json
[2025-10-12 11:20:30] -rw------- 1 boincer umatlas 194579353 Oct 12 11:18 HITS.46676269._075403.pool.root.1
[2025-10-12 11:20:30] -rw-r--r-- 1 boincer umatlas       529 Oct 12 11:18 boinc_task_state.xml
[2025-10-12 11:20:30] -rw------- 1 boincer umatlas      1050 Oct 12 11:19 memory_monitor_summary.json
[2025-10-12 11:20:30] -rw------- 1 boincer umatlas    365180 Oct 12 11:19 log.46676269._075403.job.log.tgz.1
[2025-10-12 11:20:30] -rw------- 1 boincer umatlas      7848 Oct 12 11:19 heartbeat.json
[2025-10-12 11:20:30] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 11:20 boinc_mmap_file
[2025-10-12 11:20:30] -rw-r--r-- 1 boincer umatlas        27 Oct 12 11:20 wrapper_checkpoint.txt
[2025-10-12 11:20:30] -rw------- 1 boincer umatlas      4810 Oct 12 11:20 pilotlog.txt
[2025-10-12 11:20:30] -rw------- 1 boincer umatlas    953026 Oct 12 11:20 log.46676269._075403.job.log.1
[2025-10-12 11:20:30] -rw------- 1 boincer umatlas       357 Oct 12 11:20 output.list
[2025-10-12 11:20:30] -rw-r--r-- 1 boincer umatlas       620 Oct 12 11:20 runtime_log
[2025-10-12 11:20:30] -rw------- 1 boincer umatlas   1341440 Oct 12 11:20 result.tar.gz
[2025-10-12 11:20:30] -rw------- 1 boincer umatlas       658 Oct 12 11:20 uqqKDmoe7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3LjNDmWNRlHn.diag
[2025-10-12 11:20:30] -rw-r--r-- 1 boincer umatlas      8698 Oct 12 11:20 runtime_log.err
[2025-10-12 11:20:30] -rw-r--r-- 1 boincer umatlas     21083 Oct 12 11:20 stderr.txt
[2025-10-12 11:20:30] HITS file was successfully produced:
[2025-10-12 11:20:30] -rw------- 1 boincer umatlas 194579353 Oct 12 11:18 shared/HITS.pool.root.1
[2025-10-12 11:20:30]  *** Contents of shared directory: ***
[2025-10-12 11:20:30] total 408212
[2025-10-12 11:20:30] -rw-r--r-- 2 boincer umatlas 221494999 Oct 12 09:26 ATLAS.root_0
[2025-10-12 11:20:30] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:26 start_atlas.sh
[2025-10-12 11:20:30] -rw-r--r-- 2 boincer umatlas    569685 Oct 12 09:26 input.tar.gz
[2025-10-12 11:20:30] -rw------- 1 boincer umatlas 194579353 Oct 12 11:18 HITS.pool.root.1
[2025-10-12 11:20:30] -rw------- 1 boincer umatlas   1341440 Oct 12 11:20 result.tar.gz
11:20:31 (32478): run_atlas exited; CPU time 49666.897552
11:20:31 (32478): called boinc_finish(0)

</stderr_txt>
]]>

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