Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:42:35 (32033): wrapper (7.7.26015): starting
19:42:35 (32033): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 19:42:35] Arguments: --nthreads 8
[2025-10-12 19:42:35] Threads: 8
[2025-10-12 19:42:35] Checking for CVMFS
[2025-10-12 19:42:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 19:42:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 19:42:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 19:42:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 19:42:38] 2.11.2.0 15878 220722 144796 151629 1 61 21891665 25165824 4632 130560 0 105902243 99.849 67315512 3076 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 19:42:38] CVMFS is ok
[2025-10-12 19:42:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 19:42:38] Checking for apptainer binary...
[2025-10-12 19:42:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 19:42:38] Running /usr/bin/apptainer --version
[2025-10-12 19:42:38] apptainer version 1.3.2-1.el7
[2025-10-12 19:42:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 19:43:01] cg-vwn433.simple-grid.lan
[2025-10-12 19:43:01] apptainer works
[2025-10-12 19:43:01] Set ATHENA_PROC_NUMBER=8
[2025-10-12 19:43:01] Set ATHENA_CORE_NUMBER=8
[2025-10-12 19:43:02] Starting ATLAS job with PandaID=6839821439
[2025-10-12 19:43:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:10:32]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:10:32] 2025-10-12 22:09:49,263 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:10:32] 2025-10-12 22:09:49,264 | INFO     | sum of square deviations: 4844974562.5
[2025-10-13 00:10:32] 2025-10-12 22:09:49,271 | INFO     | sum of deviations: 125133267165.49998
[2025-10-13 00:10:32] 2025-10-12 22:09:49,271 | INFO     | mean x: 1760299285.5
[2025-10-13 00:10:32] 2025-10-12 22:09:49,272 | INFO     | mean y: 2418532.916
[2025-10-13 00:10:32] 2025-10-12 22:09:49,272 | INFO     | -- intersect: -45461597416.43713
[2025-10-13 00:10:32] 2025-10-12 22:09:49,272 | INFO     | intersect: -45461597416.43713
[2025-10-13 00:10:32] 2025-10-12 22:09:49,272 | INFO     | chi2: 6.916417525414461
[2025-10-13 00:10:32] 2025-10-12 22:09:49,273 | INFO     | sum of square deviations: 4560048290.0
[2025-10-13 00:10:32] 2025-10-12 22:09:49,278 | INFO     | sum of deviations: 138828529452.0
[2025-10-13 00:10:32] 2025-10-12 22:09:49,278 | INFO     | mean x: 1760299133.0
[2025-10-13 00:10:32] 2025-10-12 22:09:49,278 | INFO     | mean y: 2425719.8734693876
[2025-10-13 00:10:32] 2025-10-12 22:09:49,279 | INFO     | -- intersect: -53589055003.24417
[2025-10-13 00:10:32] 2025-10-12 22:09:49,279 | INFO     | intersect: -53589055003.24417
[2025-10-13 00:10:32] 2025-10-12 22:09:49,279 | INFO     | chi2: 6.190397789273353
[2025-10-13 00:10:32] 2025-10-12 22:09:49,279 | INFO     | current chi2=6.190397789273353 (change=10.497048992102336 %)
[2025-10-13 00:10:32] 2025-10-12 22:09:49,279 | INFO     | right removable region: 244
[2025-10-13 00:10:32] 2025-10-12 22:09:49,280 | INFO     | sum of square deviations: 4560048290.0
[2025-10-13 00:10:32] 2025-10-12 22:09:49,282 | INFO     | sum of deviations: 40393401205.0
[2025-10-13 00:10:32] 2025-10-12 22:09:49,282 | INFO     | mean x: 1760299438.0
[2025-10-13 00:10:32] 2025-10-12 22:09:49,282 | INFO     | mean y: 2463850.9795918367
[2025-10-13 00:10:32] 2025-10-12 22:09:49,282 | INFO     | -- intersect: -15590459056.437695
[2025-10-13 00:10:32] 2025-10-12 22:09:49,282 | INFO     | intersect: -15590459056.437695
[2025-10-13 00:10:32] 2025-10-12 22:09:49,283 | INFO     | chi2: 2.276467787538318
[2025-10-13 00:10:32] 2025-10-12 22:09:49,283 | INFO     | current chi2=2.276467787538318 (change=67.08602713509691 %)
[2025-10-13 00:10:32] 2025-10-12 22:09:49,283 | INFO     | sum of square deviations: 4286517580.0
[2025-10-13 00:10:32] 2025-10-12 22:09:49,285 | INFO     | sum of deviations: -1584806260.499998
[2025-10-13 00:10:32] 2025-10-12 22:09:49,285 | INFO     | mean x: 1760299590.5
[2025-10-13 00:10:32] 2025-10-12 22:09:49,286 | INFO     | mean y: 2487114.629166667
[2025-10-13 00:10:32] 2025-10-12 22:09:49,286 | INFO     | -- intersect: 653303018.0553654
[2025-10-13 00:10:32] 2025-10-12 22:09:49,286 | INFO     | intersect: 653303018.0553654
[2025-10-13 00:10:32] 2025-10-12 22:09:49,286 | INFO     | chi2: 0.9273513878728249
[2025-10-13 00:10:32] 2025-10-12 22:09:49,286 | INFO     | current chi2=0.9273513878728249 (change=59.263584007238435 %)
[2025-10-13 00:10:32] 2025-10-12 22:09:49,287 | INFO     | sum of square deviations: 4024149870.0
[2025-10-13 00:10:32] 2025-10-12 22:09:49,289 | INFO     | sum of deviations: -13688985538.999998
[2025-10-13 00:10:32] 2025-10-12 22:09:49,289 | INFO     | mean x: 1760299743.0
[2025-10-13 00:10:32] 2025-10-12 22:09:49,289 | INFO     | mean y: 2494139.1617021277
[2025-10-13 00:10:32] 2025-10-12 22:09:49,289 | INFO     | -- intersect: 5990521052.839351
[2025-10-13 00:10:32] 2025-10-12 22:09:49,289 | INFO     | intersect: 5990521052.839351
[2025-10-13 00:10:32] 2025-10-12 22:09:49,290 | INFO     | chi2: 0.8347900556909243
[2025-10-13 00:10:32] 2025-10-12 22:09:49,290 | INFO     | current chi2=0.8347900556909243 (change=9.981257740306981 %)
[2025-10-13 00:10:32] 2025-10-12 22:09:49,290 | INFO     | left removable region: 30
[2025-10-13 00:10:32] 2025-10-12 22:09:49,290 | INFO     | sum of square deviations: 3038856977.5
[2025-10-13 00:10:32] 2025-10-12 22:09:49,292 | INFO     | sum of deviations: -643063097.9999976
[2025-10-13 00:10:32] 2025-10-12 22:09:49,292 | INFO     | mean x: 1760300017.5
[2025-10-13 00:10:32] 2025-10-12 22:09:49,292 | INFO     | mean y: 2504884.4859813084
[2025-10-13 00:10:32] 2025-10-12 22:09:49,292 | INFO     | -- intersect: 375008095.7408453
[2025-10-13 00:10:32] 2025-10-12 22:09:49,293 | INFO     | intersect: 375008095.7408453
[2025-10-13 00:10:32] 2025-10-12 22:09:49,293 | INFO     | chi2: 0.011671512595158175
[2025-10-13 00:10:32] 2025-10-12 22:09:49,293 | INFO     | -- intersect: 375008095.7408453
[2025-10-13 00:10:32] 2025-10-12 22:09:49,293 | INFO     | current memory leak: -0.21 B/s (using 214 data points, chi2=0.01)
[2025-10-13 00:10:32] 2025-10-12 22:09:49,294 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-10-13 00:10:32] 2025-10-12 22:09:49,294 | INFO     | ..............................
[2025-10-13 00:10:32] 2025-10-12 22:09:49,294 | INFO     | . Timing measurements:
[2025-10-13 00:10:32] 2025-10-12 22:09:49,294 | INFO     | . get job = 0 s
[2025-10-13 00:10:32] 2025-10-12 22:09:49,294 | INFO     | . initial setup = 5 s
[2025-10-13 00:10:32] 2025-10-12 22:09:49,295 | INFO     | . payload setup = 129 s
[2025-10-13 00:10:32] 2025-10-12 22:09:49,295 | INFO     | . stage-in = 0 s
[2025-10-13 00:10:32] 2025-10-12 22:09:49,295 | INFO     | . payload execution = 15356 s
[2025-10-13 00:10:32] 2025-10-12 22:09:49,295 | INFO     | . stage-out = 3 s
[2025-10-13 00:10:32] 2025-10-12 22:09:49,295 | INFO     | . log creation = 1 s
[2025-10-13 00:10:32] 2025-10-12 22:09:49,295 | INFO     | ..............................
[2025-10-13 00:10:32] 2025-10-12 22:09:49,845 | INFO     | 
[2025-10-13 00:10:32] 2025-10-12 22:09:49,846 | INFO     | job summary report
[2025-10-13 00:10:32] 2025-10-12 22:09:49,846 | INFO     | --------------------------------------------------
[2025-10-13 00:10:32] 2025-10-12 22:09:49,846 | INFO     | PanDA job id: 6839821439
[2025-10-13 00:10:32] 2025-10-12 22:09:49,846 | INFO     | task id: 46676269
[2025-10-13 00:10:32] 2025-10-12 22:09:49,846 | INFO     | errors: (none)
[2025-10-13 00:10:32] 2025-10-12 22:09:49,846 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:10:32] 2025-10-12 22:09:49,846 | INFO     | pilot state: finished 
[2025-10-13 00:10:32] 2025-10-12 22:09:49,847 | INFO     | transexitcode: 0
[2025-10-13 00:10:32] 2025-10-12 22:09:49,847 | INFO     | exeerrorcode: 0
[2025-10-13 00:10:32] 2025-10-12 22:09:49,847 | INFO     | exeerrordiag: 
[2025-10-13 00:10:32] 2025-10-12 22:09:49,847 | INFO     | exitcode: 0
[2025-10-13 00:10:32] 2025-10-12 22:09:49,847 | INFO     | exitmsg: OK
[2025-10-13 00:10:32] 2025-10-12 22:09:49,847 | INFO     | cpuconsumptiontime: 56319 s
[2025-10-13 00:10:32] 2025-10-12 22:09:49,847 | INFO     | nevents: 400
[2025-10-13 00:10:32] 2025-10-12 22:09:49,847 | INFO     | neventsw: 0
[2025-10-13 00:10:32] 2025-10-12 22:09:49,847 | INFO     | pid: 9938
[2025-10-13 00:10:32] 2025-10-12 22:09:49,847 | INFO     | pgrp: 9938
[2025-10-13 00:10:32] 2025-10-12 22:09:49,847 | INFO     | corecount: 8
[2025-10-13 00:10:32] 2025-10-12 22:09:49,848 | INFO     | event service: False
[2025-10-13 00:10:32] 2025-10-12 22:09:49,848 | INFO     | sizes: {0: 2348028, 1: 2348713, 2: 2348884, 12: 2348912, 23: 2348940, 34: 2348968, 45: 2349124, 55: 2349152, 66: 2349180, 77: 2349208, 88: 2349264, 97: 2349834, 98
[2025-10-13 00:10:32] 2025-10-12 22:09:49,848 | INFO     | --------------------------------------------------
[2025-10-13 00:10:32] 2025-10-12 22:09:49,848 | INFO     | 
[2025-10-13 00:10:32] 2025-10-12 22:09:49,848 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-10-13 00:10:32] 2025-10-12 22:09:50,278 | INFO     | PID=3419 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 00:10:32] 2025-10-12 22:09:50,279 | INFO     | .. there are 9 such processes running
[2025-10-13 00:10:32] 2025-10-12 22:09:50,439 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:10:32] 2025-10-12 22:09:50,439 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:10:32] 2025-10-12 22:09:50,439 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:10:32] 2025-10-12 22:09:50,439 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:10:32] 2025-10-12 22:09:50,440 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:10:32] 2025-10-12 22:09:50,440 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:10:32] 2025-10-12 22:09:50,440 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:10:32] 2025-10-12 22:09:50,440 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:10:32] 2025-10-12 22:09:50,440 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:10:32] 2025-10-12 22:09:50,440 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:10:32] 2025-10-12 22:09:50,440 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:10:32] 2025-10-12 22:09:50,440 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:10:32] 2025-10-12 22:09:50,440 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:10:32] 2025-10-12 22:09:50,440 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:10:32] 2025-10-12 22:09:50,441 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:10:32] 2025-10-12 22:09:50,441 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:10:32] 2025-10-12 22:09:50,441 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:10:32] 2025-10-12 22:09:50,441 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:10:32] 2025-10-12 22:09:50,441 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:10:32] 2025-10-12 22:09:50,441 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:10:32] 2025-10-12 22:09:50,441 | INFO     | job 6839821439 has completed (purged errors)
[2025-10-13 00:10:32] 2025-10-12 22:09:50,441 | INFO     | overall cleanup function is called
[2025-10-13 00:10:32] 2025-10-12 22:09:51,450 | INFO     | --- collectZombieJob: --- 10, [9938]
[2025-10-13 00:10:32] 2025-10-12 22:09:51,451 | INFO     | zombie collector waiting for pid 9938
[2025-10-13 00:10:32] 2025-10-12 22:09:51,451 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:10:32] 2025-10-12 22:09:51,451 | INFO     | collected zombie processes
[2025-10-13 00:10:32] 2025-10-12 22:09:51,451 | INFO     | will attempt to kill all subprocesses of pid=9938
[2025-10-13 00:10:32] 2025-10-12 22:09:51,565 | INFO     | process IDs to be killed: [9938] (in reverse order)
[2025-10-13 00:10:32] 2025-10-12 22:09:52,312 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:10:32] 2025-10-12 22:09:52,313 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:10:32] 2025-10-12 22:09:52,316 | INFO     | did not find any defunct processes belonging to 9938
[2025-10-13 00:10:32] 2025-10-12 22:09:52,319 | INFO     | did not find any defunct processes belonging to 9938
[2025-10-13 00:10:32] 2025-10-12 22:09:52,319 | INFO     | ready for new job
[2025-10-13 00:10:32] 2025-10-12 22:09:52,319 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:10:32] 2025-10-12 22:09:52,321 | INFO     | ***************************************
[2025-10-13 00:10:32] 2025-10-12 22:09:52,321 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 00:10:32] 2025-10-12 22:09:52,321 | INFO     | ***************************************
[2025-10-13 00:10:32] 2025-10-12 22:09:52,322 | INFO     | 
[2025-10-13 00:10:32] 2025-10-12 22:09:52,322 | INFO     | pilot is running in a VM
[2025-10-13 00:10:32] 2025-10-12 22:09:52,322 | INFO     | architecture information:
[2025-10-13 00:10:32] 2025-10-12 22:09:52,330 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:10:32] 2025-10-12 22:09:52,493 | INFO     | cat /etc/os-release:
[2025-10-13 00:10:32] NAME="CentOS Linux"
[2025-10-13 00:10:32] VERSION="7 (Core)"
[2025-10-13 00:10:32] ID="centos"
[2025-10-13 00:10:32] ID_LIKE="rhel fedora"
[2025-10-13 00:10:32] VERSION_ID="7"
[2025-10-13 00:10:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:10:32] ANSI_COLOR="0;31"
[2025-10-13 00:10:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:10:32] HOME_URL="https://www.centos.org/"
[2025-10-13 00:10:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:10:32] 
[2025-10-13 00:10:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:10:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:10:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:10:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:10:32] 
[2025-10-13 00:10:32] 2025-10-12 22:09:52,494 | INFO     | ***************************************
[2025-10-13 00:10:32] 2025-10-12 22:09:52,997 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-10-13 00:10:32] 2025-10-12 22:09:53,218 | INFO     | sufficient remaining disk space (496065576960 B)
[2025-10-13 00:10:32] 2025-10-12 22:09:53,218 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:10:32] 2025-10-12 22:09:53,219 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:10:32] 2025-10-12 22:09:53,219 | INFO     | update_server=False
[2025-10-13 00:10:32] 2025-10-12 22:09:53,219 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:10:32] 2025-10-12 22:09:53,219 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:10:32] 2025-10-12 22:09:53,226 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:10:32] 2025-10-12 22:09:53,227 | INFO     | aborting loop
[2025-10-13 00:10:32] 2025-10-12 22:09:53,452 | INFO     | all data control threads have been joined
[2025-10-13 00:10:32] 2025-10-12 22:09:54,142 | INFO     | all payload control threads have been joined
[2025-10-13 00:10:32] 2025-10-12 22:09:54,225 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:10:32] 2025-10-12 22:09:54,233 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:10:32] 2025-10-12 22:09:54,234 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:10:32] 2025-10-12 22:09:54,376 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:10:32] 2025-10-12 22:09:54,430 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:10:32] 2025-10-12 22:09:54,459 | INFO     | [data] control thread has finished
[2025-10-13 00:10:32] 2025-10-12 22:09:54,568 | INFO     | all job control threads have been joined
[2025-10-13 00:10:32] 2025-10-12 22:09:54,650 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:10:32] 2025-10-12 22:09:54,911 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:10:32] 2025-10-12 22:09:54,924 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:10:32] 2025-10-12 22:09:54,957 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:10:32] 2025-10-12 22:09:55,149 | INFO     | [payload] control thread has finished
[2025-10-13 00:10:32] 2025-10-12 22:09:55,375 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:10:32] 2025-10-12 22:09:55,437 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:10:32] 2025-10-12 22:09:55,505 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:10:32] 2025-10-12 22:09:55,512 | INFO     | [job] validate thread has finished
[2025-10-13 00:10:32] 2025-10-12 22:09:55,575 | INFO     | [job] control thread has finished
[2025-10-13 00:10:32] 2025-10-12 22:09:56,384 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:10:32] 2025-10-12 22:09:57,228 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:10:32] 2025-10-12 22:10:22,454 | INFO     | PID=3419 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 00:10:32] 2025-10-12 22:10:22,454 | INFO     | .. there are 9 such processes running
[2025-10-13 00:10:32] 2025-10-12 22:10:22,455 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:10:32] 2025-10-12 22:10:22,455 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:10:32] 2025-10-12 22:10:22,456 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:10:32] 2025-10-12 22:10:23,538 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:10:32] 2025-10-12 22:10:24,178 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140323848529728)>', '<ExcThread(monitor, started 140323250480896)>']
[2025-10-13 00:10:32] 2025-10-12 22:10:24,465 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:10:32] 2025-10-12 22:10:24,466 | INFO     | [monitor] control thread has ended
[2025-10-13 00:10:32] 2025-10-12 22:10:29,203 | INFO     | all workflow threads have been joined
[2025-10-13 00:10:32] 2025-10-12 22:10:29,204 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:10:32] 2025-10-12 22:10:29,204 | INFO     | traces error code: 0
[2025-10-13 00:10:32] 2025-10-12 22:10:29,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:10:32] 2025-10-12 22:10:29,610 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:10:32] 2025-10-12 22:10:29,714 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:10:32] 2025-10-12 22:10:29,816 [wrapper] pilotpid: 3419
[2025-10-13 00:10:32] 2025-10-12 22:10:29,899 [wrapper] Pilot exit status: 0
[2025-10-13 00:10:32] 2025-10-12 22:10:30,334 [wrapper] pandaids: 6839821439
[2025-10-13 00:10:32] 2025-10-12 22:10:31,283 [wrapper] cleanup supervisor_pilot 19493 3420
[2025-10-13 00:10:32] 2025-10-12 22:10:31,381 [wrapper] Test setup, not cleaning
[2025-10-13 00:10:32] 2025-10-12 22:10:31,524 [wrapper] apfmon messages muted
[2025-10-13 00:10:32] 2025-10-12 22:10:31,646 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:10:32] 2025-10-12 22:10:31,744 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:10:32]  *** Error codes and diagnostics ***
[2025-10-13 00:10:32]     "exeErrorCode": 0,
[2025-10-13 00:10:32]     "exeErrorDiag": "",
[2025-10-13 00:10:32]     "pilotErrorCode": 0,
[2025-10-13 00:10:32]     "pilotErrorDiag": "",
[2025-10-13 00:10:32]  *** Listing of results directory ***
[2025-10-13 00:10:32] total 410984
[2025-10-13 00:10:32] -rw-r--r--. 1 boinc boinc    563267 Oct  7 09:02 pilot3.tar.gz
[2025-10-13 00:10:32] -rw-r--r--. 1 boinc boinc      5112 Oct 12 11:11 queuedata.json
[2025-10-13 00:10:32] -rwx------. 1 boinc boinc     36292 Oct 12 11:12 runpilot2-wrapper.sh
[2025-10-13 00:10:32] -rw-r--r--. 1 boinc boinc       100 Oct 12 19:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:10:32] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 19:42 run_atlas
[2025-10-13 00:10:32] -rw-r--r--. 1 boinc boinc       105 Oct 12 19:42 job.xml
[2025-10-13 00:10:32] -rw-r--r--. 2 boinc boinc 221534608 Oct 12 19:42 EVNT.46676267._003565.pool.root.1
[2025-10-13 00:10:32] -rw-r--r--. 2 boinc boinc     15120 Oct 12 19:42 start_atlas.sh
[2025-10-13 00:10:32] drwxrwx--x. 2 boinc boinc        68 Oct 12 19:42 shared
[2025-10-13 00:10:32] -rw-r--r--. 2 boinc boinc    576710 Oct 12 19:42 input.tar.gz
[2025-10-13 00:10:32] -rw-r--r--. 1 boinc boinc      6390 Oct 12 19:42 init_data.xml
[2025-10-13 00:10:32] -rw-r--r--. 1 boinc boinc         0 Oct 12 19:42 boinc_lockfile
[2025-10-13 00:10:32] -rw-r--r--. 1 boinc boinc      2549 Oct 12 19:43 pandaJob.out
[2025-10-13 00:10:32] -rw-------. 1 boinc boinc    975528 Oct 12 19:46 agis_schedconf.cvmfs.json
[2025-10-13 00:10:32] drwx------. 4 boinc boinc      4096 Oct 12 19:46 pilot3
[2025-10-13 00:10:32] -rw-------. 1 boinc boinc 190254242 Oct 13 00:06 HITS.46676269._075127.pool.root.1
[2025-10-13 00:10:32] -rw-r--r--. 1 boinc boinc       531 Oct 13 00:07 boinc_task_state.xml
[2025-10-13 00:10:32] -rw-------. 1 boinc boinc      1031 Oct 13 00:08 memory_monitor_summary.json
[2025-10-13 00:10:32] -rw-------. 1 boinc boinc   1560580 Oct 13 00:08 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:10:32] -rw-------. 1 boinc boinc    482352 Oct 13 00:08 log.46676269._075127.job.log.tgz.1
[2025-10-13 00:10:32] -rw-------. 1 boinc boinc      7784 Oct 13 00:09 heartbeat.json
[2025-10-13 00:10:32] -rw-r--r--. 1 boinc boinc      8192 Oct 13 00:10 boinc_mmap_file
[2025-10-13 00:10:32] -rw-r--r--. 1 boinc boinc        28 Oct 13 00:10 wrapper_checkpoint.txt
[2025-10-13 00:10:32] -rw-------. 1 boinc boinc        95 Oct 13 00:10 pilot_heartbeat.json
[2025-10-13 00:10:32] -rw-------. 1 boinc boinc      4883 Oct 13 00:10 pilotlog.txt
[2025-10-13 00:10:32] -rw-------. 1 boinc boinc   2100826 Oct 13 00:10 log.46676269._075127.job.log.1
[2025-10-13 00:10:32] -rw-------. 1 boinc boinc       357 Oct 13 00:10 output.list
[2025-10-13 00:10:32] -rw-r--r--. 1 boinc boinc       620 Oct 13 00:10 runtime_log
[2025-10-13 00:10:32] -rw-------. 1 boinc boinc   2600960 Oct 13 00:10 result.tar.gz
[2025-10-13 00:10:32] -rw-r--r--. 1 boinc boinc      8703 Oct 13 00:10 runtime_log.err
[2025-10-13 00:10:32] -rw-------. 1 boinc boinc       657 Oct 13 00:10 JB3KDmIJ7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqJjNDmlABN2n.diag
[2025-10-13 00:10:32] -rw-r--r--. 1 boinc boinc     20713 Oct 13 00:10 stderr.txt
[2025-10-13 00:10:32] HITS file was successfully produced:
[2025-10-13 00:10:32] -rw-------. 1 boinc boinc 190254242 Oct 13 00:06 shared/HITS.pool.root.1
[2025-10-13 00:10:32]  *** Contents of shared directory: ***
[2025-10-13 00:10:32] total 405260
[2025-10-13 00:10:32] -rw-r--r--. 2 boinc boinc 221534608 Oct 12 19:42 ATLAS.root_0
[2025-10-13 00:10:32] -rw-r--r--. 2 boinc boinc     15120 Oct 12 19:42 start_atlas.sh
[2025-10-13 00:10:32] -rw-r--r--. 2 boinc boinc    576710 Oct 12 19:42 input.tar.gz
[2025-10-13 00:10:32] -rw-------. 1 boinc boinc 190254242 Oct 13 00:06 HITS.pool.root.1
[2025-10-13 00:10:32] -rw-------. 1 boinc boinc   2600960 Oct 13 00:10 result.tar.gz
00:10:34 (32033): run_atlas exited; CPU time 56535.849611
00:10:34 (32033): called boinc_finish(0)

</stderr_txt>
]]>

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