Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:39:53 (2218558): wrapper (7.7.26015): starting
06:39:53 (2218558): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 06:39:53] Arguments: --nthreads 12
[2025-10-13 06:39:53] Threads: 12
[2025-10-13 06:39:53] Checking for CVMFS
[2025-10-13 06:39:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:39:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:39:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:39:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:39:54] 2.13.1.0 2584362 12862 83652 151649 1 57 2837618 4097024 0 130560 0 22982444 99.996 445146 4048 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-13 06:39:54] CVMFS is ok
[2025-10-13 06:39:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:39:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:39:54] Further information can be found at the LHC@home message board.
[2025-10-13 06:39:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:39:54] Checking for apptainer binary...
[2025-10-13 06:39:54] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-13 06:39:54] apptainer is not installed, using version from CVMFS
[2025-10-13 06:39:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:39:54] pckelar1.cern.ch
[2025-10-13 06:39:54] apptainer works
[2025-10-13 06:39:54] Set ATHENA_PROC_NUMBER=12
[2025-10-13 06:39:54] Set ATHENA_CORE_NUMBER=12
[2025-10-13 06:39:54] Starting ATLAS job with PandaID=6838990550
[2025-10-13 06:39:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:24:12]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:24:12]  protocol_id=None
[2025-10-13 07:24:12]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 07:24:12]  replicas=None
[2025-10-13 07:24:12]  scope=mc23_13p6TeV
[2025-10-13 07:24:12]  status=None
[2025-10-13 07:24:12]  status_code=0
[2025-10-13 07:24:12]  storage_token=
[2025-10-13 07:24:12]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6838990550/log.46676269._066203.job.log.tgz.1
[2025-10-13 07:24:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/98/log.46676269._066203.job.log.tgz.1
[2025-10-13 07:24:12]  workdir=None
[2025-10-13 07:24:12] ]
[2025-10-13 07:24:12] 2025-10-13 05:23:33,285 | INFO     | transferring file log.46676269._066203.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6838990550/log.46676269._066203.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 07:24:12] 2025-10-13 05:23:33,285 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6838990550/log.46676269._066203.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._066203.job
[2025-10-13 07:24:12] 2025-10-13 05:23:33,297 | INFO     | adding to output.list: log.46676269._066203.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/98/log.46676269._066203.job.log.tg
[2025-10-13 07:24:12] 2025-10-13 05:23:33,297 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 07:24:12] 2025-10-13 05:23:33,298 | INFO     | summary of transferred files:
[2025-10-13 07:24:12] 2025-10-13 05:23:33,298 | INFO     |  -- lfn=log.46676269._066203.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 07:24:12] 2025-10-13 05:23:33,298 | INFO     | stage-out finished correctly
[2025-10-13 07:24:12] 2025-10-13 05:23:34,176 | INFO     | time since job start (2613s) is within the limit (172800.0s)
[2025-10-13 07:24:12] 2025-10-13 05:23:35,131 | INFO     | monitor loop #203: job 0:6838990550 is in state 'finished'
[2025-10-13 07:24:12] 2025-10-13 05:23:35,131 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:24:12] 2025-10-13 05:23:35,280 | INFO     | PID=2222381 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:24:12] 2025-10-13 05:23:35,331 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 07:24:12] 2025-10-13 05:23:35,375 | INFO     | job 6838990550 has state=finished
[2025-10-13 07:24:12] 2025-10-13 05:23:35,375 | INFO     | preparing for final server update for job 6838990550 in state='finished'
[2025-10-13 07:24:12] 2025-10-13 05:23:35,375 | INFO     | this job has now completed (state=finished)
[2025-10-13 07:24:12] 2025-10-13 05:23:35,375 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 07:24:12] 2025-10-13 05:23:35,375 | INFO     | log transfer has been attempted: DONE
[2025-10-13 07:24:12] 2025-10-13 05:23:35,375 | INFO     | job 6838990550 has finished - writing final server update
[2025-10-13 07:24:12] 2025-10-13 05:23:35,376 | INFO     | total number of processed events: 400 (read)
[2025-10-13 07:24:12] 2025-10-13 05:23:35,376 | INFO     | executing command: lscpu
[2025-10-13 07:24:12] 2025-10-13 05:23:35,396 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 07:24:12] 2025-10-13 05:23:36,280 | INFO     | time since job start (2615s) is within the limit (172800.0s)
[2025-10-13 07:24:12] 2025-10-13 05:23:37,633 | INFO     | monitor loop #204: job 0:6838990550 is in state 'finished'
[2025-10-13 07:24:12] 2025-10-13 05:23:37,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:24:12] 2025-10-13 05:23:38,285 | INFO     | time since job start (2617s) is within the limit (172800.0s)
[2025-10-13 07:24:12] 2025-10-13 05:23:40,029 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 07:24:12] 2025-10-13 05:23:40,031 | INFO     | found 20 cores (10 cores per socket, 2 sockets) , CPU MHz: 2412.1207999999997
[2025-10-13 07:24:12] 2025-10-13 05:23:40,033 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6838990550/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:24:12] 2025-10-13 05:23:40,034 | INFO     | extracted standard info from prmon json
[2025-10-13 07:24:12] 2025-10-13 05:23:40,034 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:24:12] 2025-10-13 05:23:40,034 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:24:12] 2025-10-13 05:23:40,034 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:24:12] 2025-10-13 05:23:40,034 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:24:12] 2025-10-13 05:23:40,035 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:24:12] 2025-10-13 05:23:40,035 | INFO     | sum of square deviations: 14456085.0
[2025-10-13 07:24:12] 2025-10-13 05:23:40,035 | INFO     | sum of deviations: -2579827554.9999995
[2025-10-13 07:24:12] 2025-10-13 05:23:40,035 | INFO     | mean x: 1760331797.5
[2025-10-13 07:24:12] 2025-10-13 05:23:40,035 | INFO     | mean y: 3057184.222222222
[2025-10-13 07:24:12] 2025-10-13 05:23:40,036 | INFO     | -- intersect: 314151215356.58905
[2025-10-13 07:24:12] 2025-10-13 05:23:40,036 | INFO     | intersect: 314151215356.58905
[2025-10-13 07:24:12] 2025-10-13 05:23:40,036 | INFO     | chi2: 0.06703171321815717
[2025-10-13 07:24:12] 2025-10-13 05:23:40,036 | INFO     | -- intersect: 314151215356.58905
[2025-10-13 07:24:12] 2025-10-13 05:23:40,036 | INFO     | current memory leak: -178.46 B/s (using 36 data points, chi2=0.07)
[2025-10-13 07:24:12] 2025-10-13 05:23:40,036 | INFO     | could have reported an average CPU frequency of 2509 MHz (5 samples)
[2025-10-13 07:24:12] 2025-10-13 05:23:40,036 | INFO     | ..............................
[2025-10-13 07:24:12] 2025-10-13 05:23:40,036 | INFO     | . Timing measurements:
[2025-10-13 07:24:12] 2025-10-13 05:23:40,036 | INFO     | . get job = 0 s
[2025-10-13 07:24:12] 2025-10-13 05:23:40,036 | INFO     | . initial setup = 1 s
[2025-10-13 07:24:12] 2025-10-13 05:23:40,036 | INFO     | . payload setup = 6 s
[2025-10-13 07:24:12] 2025-10-13 05:23:40,036 | INFO     | . stage-in = 0 s
[2025-10-13 07:24:12] 2025-10-13 05:23:40,036 | INFO     | . payload execution = 2585 s
[2025-10-13 07:24:12] 2025-10-13 05:23:40,036 | INFO     | . stage-out = 0 s
[2025-10-13 07:24:12] 2025-10-13 05:23:40,036 | INFO     | . log creation = 0 s
[2025-10-13 07:24:12] 2025-10-13 05:23:40,037 | INFO     | ..............................
[2025-10-13 07:24:12] 2025-10-13 05:23:40,086 | INFO     | 
[2025-10-13 07:24:12] 2025-10-13 05:23:40,086 | INFO     | job summary report
[2025-10-13 07:24:12] 2025-10-13 05:23:40,086 | INFO     | --------------------------------------------------
[2025-10-13 07:24:12] 2025-10-13 05:23:40,086 | INFO     | PanDA job id: 6838990550
[2025-10-13 07:24:12] 2025-10-13 05:23:40,086 | INFO     | task id: 46676269
[2025-10-13 07:24:12] 2025-10-13 05:23:40,086 | INFO     | errors: (none)
[2025-10-13 07:24:12] 2025-10-13 05:23:40,086 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:24:12] 2025-10-13 05:23:40,086 | INFO     | pilot state: finished 
[2025-10-13 07:24:12] 2025-10-13 05:23:40,086 | INFO     | transexitcode: 0
[2025-10-13 07:24:12] 2025-10-13 05:23:40,086 | INFO     | exeerrorcode: 0
[2025-10-13 07:24:12] 2025-10-13 05:23:40,086 | INFO     | exeerrordiag: 
[2025-10-13 07:24:12] 2025-10-13 05:23:40,086 | INFO     | exitcode: 0
[2025-10-13 07:24:12] 2025-10-13 05:23:40,086 | INFO     | exitmsg: OK
[2025-10-13 07:24:12] 2025-10-13 05:23:40,086 | INFO     | cpuconsumptiontime: 28367 s
[2025-10-13 07:24:12] 2025-10-13 05:23:40,086 | INFO     | nevents: 400
[2025-10-13 07:24:12] 2025-10-13 05:23:40,086 | INFO     | neventsw: 0
[2025-10-13 07:24:12] 2025-10-13 05:23:40,086 | INFO     | pid: 2229870
[2025-10-13 07:24:12] 2025-10-13 05:23:40,086 | INFO     | pgrp: 2229870
[2025-10-13 07:24:12] 2025-10-13 05:23:40,086 | INFO     | corecount: 12
[2025-10-13 07:24:12] 2025-10-13 05:23:40,086 | INFO     | event service: False
[2025-10-13 07:24:12] 2025-10-13 05:23:40,087 | INFO     | sizes: {0: 2348029, 1: 2348885, 4: 2349147, 11: 2349175, 2595: 2374400, 2597: 2383398, 2599: 2383582, 2604: 2383808}
[2025-10-13 07:24:12] 2025-10-13 05:23:40,087 | INFO     | --------------------------------------------------
[2025-10-13 07:24:12] 2025-10-13 05:23:40,087 | INFO     | 
[2025-10-13 07:24:12] 2025-10-13 05:23:40,087 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 07:24:12] 2025-10-13 05:23:40,100 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:24:12] 2025-10-13 05:23:40,100 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:24:12] 2025-10-13 05:23:40,100 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:24:12] 2025-10-13 05:23:40,100 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:24:12] 2025-10-13 05:23:40,100 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:24:12] 2025-10-13 05:23:40,100 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:24:12] 2025-10-13 05:23:40,100 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:24:12] 2025-10-13 05:23:40,100 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:24:12] 2025-10-13 05:23:40,100 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:24:12] 2025-10-13 05:23:40,100 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:24:12] 2025-10-13 05:23:40,101 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:24:12] 2025-10-13 05:23:40,101 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:24:12] 2025-10-13 05:23:40,101 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:24:12] 2025-10-13 05:23:40,101 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:24:12] 2025-10-13 05:23:40,101 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:24:12] 2025-10-13 05:23:40,101 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:24:12] 2025-10-13 05:23:40,101 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:24:12] 2025-10-13 05:23:40,101 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:24:12] 2025-10-13 05:23:40,101 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:24:12] 2025-10-13 05:23:40,101 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:24:12] 2025-10-13 05:23:40,101 | INFO     | job 6838990550 has completed (purged errors)
[2025-10-13 07:24:12] 2025-10-13 05:23:40,101 | INFO     | overall cleanup function is called
[2025-10-13 07:24:12] 2025-10-13 05:23:41,108 | INFO     | --- collectZombieJob: --- 10, [2229870]
[2025-10-13 07:24:12] 2025-10-13 05:23:41,108 | INFO     | zombie collector waiting for pid 2229870
[2025-10-13 07:24:12] 2025-10-13 05:23:41,108 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:24:12] 2025-10-13 05:23:41,108 | INFO     | collected zombie processes
[2025-10-13 07:24:12] 2025-10-13 05:23:41,108 | INFO     | will attempt to kill all subprocesses of pid=2229870
[2025-10-13 07:24:12] 2025-10-13 05:23:41,190 | INFO     | process IDs to be killed: [2229870] (in reverse order)
[2025-10-13 07:24:12] 2025-10-13 05:23:41,222 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:24:12] 2025-10-13 05:23:41,222 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:24:12] 2025-10-13 05:23:41,223 | INFO     | did not find any defunct processes belonging to 2229870
[2025-10-13 07:24:12] 2025-10-13 05:23:41,225 | INFO     | did not find any defunct processes belonging to 2229870
[2025-10-13 07:24:12] 2025-10-13 05:23:41,225 | INFO     | ready for new job
[2025-10-13 07:24:12] 2025-10-13 05:23:41,225 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:24:12] 2025-10-13 05:23:41,226 | INFO     | ***************************************
[2025-10-13 07:24:12] 2025-10-13 05:23:41,226 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:24:12] 2025-10-13 05:23:41,226 | INFO     | ***************************************
[2025-10-13 07:24:12] 2025-10-13 05:23:41,226 | INFO     | 
[2025-10-13 07:24:12] 2025-10-13 05:23:41,227 | INFO     | architecture information:
[2025-10-13 07:24:12] 2025-10-13 05:23:41,227 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:24:12] 2025-10-13 05:23:41,236 | INFO     | cat /etc/os-release:
[2025-10-13 07:24:12] NAME="CentOS Linux"
[2025-10-13 07:24:12] VERSION="7 (Core)"
[2025-10-13 07:24:12] ID="centos"
[2025-10-13 07:24:12] ID_LIKE="rhel fedora"
[2025-10-13 07:24:12] VERSION_ID="7"
[2025-10-13 07:24:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:24:12] ANSI_COLOR="0;31"
[2025-10-13 07:24:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:24:12] HOME_URL="https://www.centos.org/"
[2025-10-13 07:24:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:24:12] 
[2025-10-13 07:24:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:24:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:24:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:24:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:24:12] 
[2025-10-13 07:24:12] 2025-10-13 05:23:41,236 | INFO     | ***************************************
[2025-10-13 07:24:12] 2025-10-13 05:23:41,739 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 07:24:12] 2025-10-13 05:23:41,751 | INFO     | sufficient remaining disk space (825025888256 B)
[2025-10-13 07:24:12] 2025-10-13 05:23:41,751 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:24:12] 2025-10-13 05:23:41,751 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:24:12] 2025-10-13 05:23:41,752 | INFO     | update_server=False
[2025-10-13 07:24:12] 2025-10-13 05:23:41,752 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:24:12] 2025-10-13 05:23:41,752 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:24:12] 2025-10-13 05:23:41,752 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:24:12] 2025-10-13 05:23:41,752 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:24:12] 2025-10-13 05:23:41,752 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:24:12] 2025-10-13 05:23:41,753 | INFO     | aborting loop
[2025-10-13 07:24:12] 2025-10-13 05:23:41,831 | INFO     | all data control threads have been joined
[2025-10-13 07:24:12] 2025-10-13 05:23:42,662 | INFO     | all payload control threads have been joined
[2025-10-13 07:24:12] 2025-10-13 05:23:42,757 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:24:12] 2025-10-13 05:23:42,758 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:24:12] 2025-10-13 05:23:42,759 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:24:12] 2025-10-13 05:23:42,836 | INFO     | [data] control thread has finished
[2025-10-13 07:24:12] 2025-10-13 05:23:42,913 | INFO     | all job control threads have been joined
[2025-10-13 07:24:12] 2025-10-13 05:23:42,996 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:24:12] 2025-10-13 05:23:43,330 | INFO     | [job] validate thread has finished
[2025-10-13 07:24:12] 2025-10-13 05:23:43,410 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:24:12] 2025-10-13 05:23:43,563 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:24:12] 2025-10-13 05:23:43,610 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:24:12] 2025-10-13 05:23:43,667 | INFO     | [payload] control thread has finished
[2025-10-13 07:24:12] 2025-10-13 05:23:43,759 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:24:12] 2025-10-13 05:23:43,918 | INFO     | [job] control thread has finished
[2025-10-13 07:24:12] 2025-10-13 05:23:44,094 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:24:12] 2025-10-13 05:23:44,191 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:24:12] 2025-10-13 05:23:45,758 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:24:12] 2025-10-13 05:23:51,971 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:24:12] 2025-10-13 05:23:52,976 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:24:12] 2025-10-13 05:24:05,044 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:24:12] 2025-10-13 05:24:06,989 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140502007338816)>', '<ExcThread(monitor, started 140501181257472)>']
[2025-10-13 07:24:12] 2025-10-13 05:24:11,470 | INFO     | PID=2222381 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:24:12] 2025-10-13 05:24:11,470 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:24:12] 2025-10-13 05:24:11,470 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:24:12] 2025-10-13 05:24:11,470 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:24:12] 2025-10-13 05:24:11,470 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:24:12] 2025-10-13 05:24:11,470 | INFO     | [monitor] control thread has ended
[2025-10-13 07:24:12] 2025-10-13 05:24:12,014 | INFO     | all workflow threads have been joined
[2025-10-13 07:24:12] 2025-10-13 05:24:12,014 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:24:12] 2025-10-13 05:24:12,015 | INFO     | traces error code: 0
[2025-10-13 07:24:12] 2025-10-13 05:24:12,015 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:24:12] 2025-10-13 05:24:12,090 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:24:12] 2025-10-13 05:24:12,093 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:24:12] 2025-10-13 05:24:12,095 [wrapper] pilotpid: 2222381
[2025-10-13 07:24:12] 2025-10-13 05:24:12,097 [wrapper] Pilot exit status: 0
[2025-10-13 07:24:12] 2025-10-13 05:24:12,106 [wrapper] pandaids: 6838990550
[2025-10-13 07:24:12] 2025-10-13 05:24:12,128 [wrapper] cleanup supervisor_pilot 2239117 2222382
[2025-10-13 07:24:12] 2025-10-13 05:24:12,130 [wrapper] Test setup, not cleaning
[2025-10-13 07:24:12] 2025-10-13 05:24:12,132 [wrapper] apfmon messages muted
[2025-10-13 07:24:12] 2025-10-13 05:24:12,134 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:24:12] 2025-10-13 05:24:12,136 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:24:12]  *** Error codes and diagnostics ***
[2025-10-13 07:24:12]     "exeErrorCode": 0,
[2025-10-13 07:24:12]     "exeErrorDiag": "",
[2025-10-13 07:24:12]     "pilotErrorCode": 0,
[2025-10-13 07:24:12]     "pilotErrorDiag": "",
[2025-10-13 07:24:12]  *** Listing of results directory ***
[2025-10-13 07:24:12] total 412772
[2025-10-13 07:24:12] -rw-r--r-- 1 boinc boinc    557409 Oct 12 00:22 pilot3.tar.gz
[2025-10-13 07:24:12] -rw-r--r-- 1 boinc boinc      5112 Oct 12 00:47 queuedata.json
[2025-10-13 07:24:12] -rwx------ 1 boinc boinc     36292 Oct 12 00:47 runpilot2-wrapper.sh
[2025-10-13 07:24:12] -rw-r--r-- 1 boinc boinc       100 Oct 13 06:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:24:12] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 06:39 run_atlas
[2025-10-13 07:24:12] -rw-r--r-- 1 boinc boinc       105 Oct 13 06:39 job.xml
[2025-10-13 07:24:12] -rw-r--r-- 1 boinc boinc      6532 Oct 13 06:39 init_data.xml
[2025-10-13 07:24:12] -rw-r--r-- 2 boinc boinc 221244500 Oct 13 06:39 EVNT.46676267._002661.pool.root.1
[2025-10-13 07:24:12] drwxrwx--x 2 boinc boinc        68 Oct 13 06:39 shared
[2025-10-13 07:24:12] -rw-r--r-- 2 boinc boinc    569679 Oct 13 06:39 input.tar.gz
[2025-10-13 07:24:12] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:39 start_atlas.sh
[2025-10-13 07:24:12] -rw-r--r-- 1 boinc boinc         0 Oct 13 06:39 boinc_lockfile
[2025-10-13 07:24:12] -rw-r--r-- 1 boinc boinc      2550 Oct 13 06:39 pandaJob.out
[2025-10-13 07:24:12] -rw------- 1 boinc boinc    974365 Oct 13 06:40 agis_schedconf.cvmfs.json
[2025-10-13 07:24:12] -rw------- 1 boinc boinc   1560580 Oct 13 06:40 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:24:12] drwx------ 5 boinc boinc      4096 Oct 13 06:40 pilot3
[2025-10-13 07:24:12] -rw------- 1 boinc boinc 196006541 Oct 13 07:23 HITS.46676269._066203.pool.root.1
[2025-10-13 07:24:12] -rw------- 1 boinc boinc        95 Oct 13 07:23 pilot_heartbeat.json
[2025-10-13 07:24:12] -rw-r--r-- 1 boinc boinc       529 Oct 13 07:23 boinc_task_state.xml
[2025-10-13 07:24:12] -rw------- 1 boinc boinc      1020 Oct 13 07:23 memory_monitor_summary.json
[2025-10-13 07:24:12] -rw------- 1 boinc boinc    365220 Oct 13 07:23 log.46676269._066203.job.log.tgz.1
[2025-10-13 07:24:12] -rw------- 1 boinc boinc      7800 Oct 13 07:23 heartbeat.json
[2025-10-13 07:24:12] -rw-r--r-- 1 boinc boinc      8192 Oct 13 07:23 boinc_mmap_file
[2025-10-13 07:24:12] -rw-r--r-- 1 boinc boinc        27 Oct 13 07:23 wrapper_checkpoint.txt
[2025-10-13 07:24:12] -rw------- 1 boinc boinc      4821 Oct 13 07:24 pilotlog.txt
[2025-10-13 07:24:12] -rw------- 1 boinc boinc    405366 Oct 13 07:24 log.46676269._066203.job.log.1
[2025-10-13 07:24:12] -rw------- 1 boinc boinc       357 Oct 13 07:24 output.list
[2025-10-13 07:24:12] -rw-r--r-- 1 boinc boinc       620 Oct 13 07:24 runtime_log
[2025-10-13 07:24:12] -rw------- 1 boinc boinc    788480 Oct 13 07:24 result.tar.gz
[2025-10-13 07:24:12] -rw-r--r-- 1 boinc boinc      8727 Oct 13 07:24 runtime_log.err
[2025-10-13 07:24:12] -rw------- 1 boinc boinc       653 Oct 13 07:24 CZ3LDm4XxR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmNphNDmSWg5kn.diag
[2025-10-13 07:24:12] -rw-r--r-- 1 boinc boinc     21997 Oct 13 07:24 stderr.txt
[2025-10-13 07:24:12] HITS file was successfully produced:
[2025-10-13 07:24:12] -rw------- 1 boinc boinc 196006541 Oct 13 07:23 shared/HITS.pool.root.1
[2025-10-13 07:24:12]  *** Contents of shared directory: ***
[2025-10-13 07:24:12] total 408824
[2025-10-13 07:24:12] -rw-r--r-- 2 boinc boinc 221244500 Oct 13 06:39 ATLAS.root_0
[2025-10-13 07:24:12] -rw-r--r-- 2 boinc boinc    569679 Oct 13 06:39 input.tar.gz
[2025-10-13 07:24:12] -rw-r--r-- 2 boinc boinc     15120 Oct 13 06:39 start_atlas.sh
[2025-10-13 07:24:12] -rw------- 1 boinc boinc 196006541 Oct 13 07:23 HITS.pool.root.1
[2025-10-13 07:24:12] -rw------- 1 boinc boinc    788480 Oct 13 07:24 result.tar.gz
07:24:13 (2218558): run_atlas exited; CPU time 28372.843629
07:24:13 (2218558): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN