Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
11:20:10 (52870): wrapper (7.7.26015): starting
11:20:10 (52870): wrapper: running run_atlas (--nthreads 5)
[2025-10-12 11:20:10] Arguments: --nthreads 5
[2025-10-12 11:20:10] Threads: 5
[2025-10-12 11:20:10] Checking for CVMFS
[2025-10-12 11:20:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:20:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:20:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:20:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:20:10] 2.11.0.0 2490241 3306 105256 151624 0 188 2656676 4096001 6401 130560 0 16623750 99.997 257233 5252 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 11:20:10] CVMFS is ok
[2025-10-12 11:20:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:20:10] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 11:20:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 11:20:10] Further information can be found at the LHC@home message board.
[2025-10-12 11:20:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:20:10] Checking for apptainer binary...
[2025-10-12 11:20:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:20:10] Running /usr/bin/apptainer --version
[2025-10-12 11:20:10] apptainer version 1.4.3
[2025-10-12 11:20:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:20:10] x32-linux4
[2025-10-12 11:20:10] apptainer works
[2025-10-12 11:20:10] Set ATHENA_PROC_NUMBER=5
[2025-10-12 11:20:10] Set ATHENA_CORE_NUMBER=5
[2025-10-12 11:20:10] Starting ATLAS job with PandaID=6839821369
[2025-10-12 11:20:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:14:34]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:14:34] 2025-10-12 17:13:45,783 | INFO     | sum of square deviations: 435610028.0
[2025-10-12 13:14:34] 2025-10-12 17:13:45,783 | INFO     | sum of deviations: 4862770977.0
[2025-10-12 13:14:34] 2025-10-12 17:13:45,783 | INFO     | mean x: 1760285825.5
[2025-10-12 13:14:34] 2025-10-12 17:13:45,783 | INFO     | mean y: 2302600.9464285714
[2025-10-12 13:14:34] 2025-10-12 17:13:45,783 | INFO     | -- intersect: -19647995310.620213
[2025-10-12 13:14:34] 2025-10-12 17:13:45,783 | INFO     | intersect: -19647995310.620213
[2025-10-12 13:14:34] 2025-10-12 17:13:45,784 | INFO     | chi2: 1.8960518676833682
[2025-10-12 13:14:34] 2025-10-12 17:13:45,784 | INFO     | sum of square deviations: 379832238.0
[2025-10-12 13:14:34] 2025-10-12 17:13:45,784 | INFO     | sum of deviations: 11413907396.0
[2025-10-12 13:14:34] 2025-10-12 17:13:45,784 | INFO     | mean x: 1760285673.0
[2025-10-12 13:14:34] 2025-10-12 17:13:45,784 | INFO     | mean y: 2319821.1588785048
[2025-10-12 13:14:34] 2025-10-12 17:13:45,784 | INFO     | -- intersect: -52894026649.90484
[2025-10-12 13:14:34] 2025-10-12 17:13:45,784 | INFO     | intersect: -52894026649.90484
[2025-10-12 13:14:34] 2025-10-12 17:13:45,785 | INFO     | chi2: 1.1019340009746368
[2025-10-12 13:14:34] 2025-10-12 17:13:45,785 | INFO     | current chi2=1.1019340009746368 (change=41.88270797037845 %)
[2025-10-12 13:14:34] 2025-10-12 17:13:45,785 | INFO     | sum of square deviations: 329031285.5
[2025-10-12 13:14:34] 2025-10-12 17:13:45,785 | INFO     | sum of deviations: 10828434672.5
[2025-10-12 13:14:34] 2025-10-12 17:13:45,785 | INFO     | mean x: 1760285520.5
[2025-10-12 13:14:34] 2025-10-12 17:13:45,785 | INFO     | mean y: 2318062.205882353
[2025-10-12 13:14:34] 2025-10-12 17:13:45,785 | INFO     | -- intersect: -57928759022.80861
[2025-10-12 13:14:34] 2025-10-12 17:13:45,785 | INFO     | intersect: -57928759022.80861
[2025-10-12 13:14:34] 2025-10-12 17:13:45,786 | INFO     | chi2: 1.103504834586462
[2025-10-12 13:14:34] 2025-10-12 17:13:45,786 | INFO     | current chi2=1.103504834586462 (change=-0.14255242241693486 %)
[2025-10-12 13:14:34] 2025-10-12 17:13:45,786 | INFO     | right removable region: 101
[2025-10-12 13:14:34] 2025-10-12 17:13:45,786 | INFO     | sum of square deviations: 379832238.0
[2025-10-12 13:14:34] 2025-10-12 17:13:45,786 | INFO     | sum of deviations: -5951723884.0
[2025-10-12 13:14:34] 2025-10-12 17:13:45,786 | INFO     | mean x: 1760285978.0
[2025-10-12 13:14:34] 2025-10-12 17:13:45,786 | INFO     | mean y: 2331347.2429906544
[2025-10-12 13:14:34] 2025-10-12 17:13:45,787 | INFO     | -- intersect: 27584866608.330807
[2025-10-12 13:14:34] 2025-10-12 17:13:45,787 | INFO     | intersect: 27584866608.330807
[2025-10-12 13:14:34] 2025-10-12 17:13:45,787 | INFO     | chi2: 0.8235815630411116
[2025-10-12 13:14:34] 2025-10-12 17:13:45,787 | INFO     | current chi2=0.8235815630411116 (change=56.56334211746121 %)
[2025-10-12 13:14:34] 2025-10-12 17:13:45,787 | INFO     | sum of square deviations: 329031285.5
[2025-10-12 13:14:34] 2025-10-12 17:13:45,787 | INFO     | sum of deviations: -5930416340.000001
[2025-10-12 13:14:34] 2025-10-12 17:13:45,787 | INFO     | mean x: 1760286130.5
[2025-10-12 13:14:34] 2025-10-12 17:13:45,787 | INFO     | mean y: 2331269.1764705884
[2025-10-12 13:14:34] 2025-10-12 17:13:45,788 | INFO     | -- intersect: 31729495497.736053
[2025-10-12 13:14:34] 2025-10-12 17:13:45,788 | INFO     | intersect: 31729495497.736053
[2025-10-12 13:14:34] 2025-10-12 17:13:45,788 | INFO     | chi2: 0.8243530281414658
[2025-10-12 13:14:34] 2025-10-12 17:13:45,788 | INFO     | current chi2=0.8243530281414658 (change=-0.09367197312012751 %)
[2025-10-12 13:14:34] 2025-10-12 17:13:45,788 | INFO     | left removable region: 20
[2025-10-12 13:14:34] 2025-10-12 17:13:45,788 | INFO     | sum of square deviations: 164765880.0
[2025-10-12 13:14:34] 2025-10-12 17:13:45,788 | INFO     | sum of deviations: 309841447.9999999
[2025-10-12 13:14:34] 2025-10-12 17:13:45,788 | INFO     | mean x: 1760286100.0
[2025-10-12 13:14:34] 2025-10-12 17:13:45,788 | INFO     | mean y: 2352052.4938271604
[2025-10-12 13:14:34] 2025-10-12 17:13:45,788 | INFO     | -- intersect: -3307857525.595232
[2025-10-12 13:14:34] 2025-10-12 17:13:45,789 | INFO     | intersect: -3307857525.595232
[2025-10-12 13:14:34] 2025-10-12 17:13:45,789 | INFO     | chi2: 1.5069057734589037e-05
[2025-10-12 13:14:34] 2025-10-12 17:13:45,789 | INFO     | -- intersect: -3307857525.595232
[2025-10-12 13:14:34] 2025-10-12 17:13:45,789 | INFO     | current memory leak: 1.88 B/s (using 81 data points, chi2=0.00)
[2025-10-12 13:14:34] 2025-10-12 17:13:45,789 | INFO     | could have reported an average CPU frequency of 3844 MHz (7 samples)
[2025-10-12 13:14:34] 2025-10-12 17:13:45,789 | INFO     | ..............................
[2025-10-12 13:14:34] 2025-10-12 17:13:45,789 | INFO     | . Timing measurements:
[2025-10-12 13:14:34] 2025-10-12 17:13:45,789 | INFO     | . get job = 0 s
[2025-10-12 13:14:34] 2025-10-12 17:13:45,789 | INFO     | . initial setup = 1 s
[2025-10-12 13:14:34] 2025-10-12 17:13:45,789 | INFO     | . payload setup = 3 s
[2025-10-12 13:14:34] 2025-10-12 17:13:45,789 | INFO     | . stage-in = 0 s
[2025-10-12 13:14:34] 2025-10-12 17:13:45,789 | INFO     | . payload execution = 6778 s
[2025-10-12 13:14:34] 2025-10-12 17:13:45,789 | INFO     | . stage-out = 0 s
[2025-10-12 13:14:34] 2025-10-12 17:13:45,790 | INFO     | . log creation = 0 s
[2025-10-12 13:14:34] 2025-10-12 17:13:45,790 | INFO     | ..............................
[2025-10-12 13:14:34] 2025-10-12 17:13:45,858 | INFO     | 
[2025-10-12 13:14:34] 2025-10-12 17:13:45,858 | INFO     | job summary report
[2025-10-12 13:14:34] 2025-10-12 17:13:45,858 | INFO     | --------------------------------------------------
[2025-10-12 13:14:34] 2025-10-12 17:13:45,858 | INFO     | PanDA job id: 6839821369
[2025-10-12 13:14:34] 2025-10-12 17:13:45,858 | INFO     | task id: 46676269
[2025-10-12 13:14:34] 2025-10-12 17:13:45,858 | INFO     | errors: (none)
[2025-10-12 13:14:34] 2025-10-12 17:13:45,858 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:14:34] 2025-10-12 17:13:45,858 | INFO     | pilot state: finished 
[2025-10-12 13:14:34] 2025-10-12 17:13:45,858 | INFO     | transexitcode: 0
[2025-10-12 13:14:34] 2025-10-12 17:13:45,859 | INFO     | exeerrorcode: 0
[2025-10-12 13:14:34] 2025-10-12 17:13:45,859 | INFO     | exeerrordiag: 
[2025-10-12 13:14:34] 2025-10-12 17:13:45,859 | INFO     | exitcode: 0
[2025-10-12 13:14:34] 2025-10-12 17:13:45,859 | INFO     | exitmsg: OK
[2025-10-12 13:14:34] 2025-10-12 17:13:45,859 | INFO     | cpuconsumptiontime: 26917 s
[2025-10-12 13:14:34] 2025-10-12 17:13:45,859 | INFO     | nevents: 400
[2025-10-12 13:14:34] 2025-10-12 17:13:45,859 | INFO     | neventsw: 0
[2025-10-12 13:14:34] 2025-10-12 17:13:45,859 | INFO     | pid: 63351
[2025-10-12 13:14:34] 2025-10-12 17:13:45,859 | INFO     | pgrp: 63351
[2025-10-12 13:14:34] 2025-10-12 17:13:45,859 | INFO     | corecount: 5
[2025-10-12 13:14:34] 2025-10-12 17:13:45,859 | INFO     | event service: False
[2025-10-12 13:14:34] 2025-10-12 17:13:45,859 | INFO     | sizes: {0: 2348721, 1: 2348920, 4: 2349182, 11: 2349210, 6786: 2376458, 6787: 2385654, 6794: 2385792}
[2025-10-12 13:14:34] 2025-10-12 17:13:45,859 | INFO     | --------------------------------------------------
[2025-10-12 13:14:34] 2025-10-12 17:13:45,859 | INFO     | 
[2025-10-12 13:14:34] 2025-10-12 17:13:45,859 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2025-10-12 13:14:34] 2025-10-12 17:13:45,875 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:14:34] 2025-10-12 17:13:45,875 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:14:34] 2025-10-12 17:13:45,875 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:14:34] 2025-10-12 17:13:45,875 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:14:34] 2025-10-12 17:13:45,875 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:14:34] 2025-10-12 17:13:45,875 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:14:34] 2025-10-12 17:13:45,876 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:14:34] 2025-10-12 17:13:45,876 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:14:34] 2025-10-12 17:13:45,876 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:14:34] 2025-10-12 17:13:45,876 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:14:34] 2025-10-12 17:13:45,876 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:14:34] 2025-10-12 17:13:45,876 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:14:34] 2025-10-12 17:13:45,876 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:14:34] 2025-10-12 17:13:45,876 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:14:34] 2025-10-12 17:13:45,876 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:14:34] 2025-10-12 17:13:45,876 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:14:34] 2025-10-12 17:13:45,876 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:14:34] 2025-10-12 17:13:45,876 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:14:34] 2025-10-12 17:13:45,876 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:14:34] 2025-10-12 17:13:45,876 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:14:34] 2025-10-12 17:13:45,877 | INFO     | job 6839821369 has completed (purged errors)
[2025-10-12 13:14:34] 2025-10-12 17:13:45,877 | INFO     | overall cleanup function is called
[2025-10-12 13:14:34] 2025-10-12 17:13:46,884 | INFO     | --- collectZombieJob: --- 10, [63351]
[2025-10-12 13:14:34] 2025-10-12 17:13:46,884 | INFO     | zombie collector waiting for pid 63351
[2025-10-12 13:14:34] 2025-10-12 17:13:46,884 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:14:34] 2025-10-12 17:13:46,885 | INFO     | collected zombie processes
[2025-10-12 13:14:34] 2025-10-12 17:13:46,885 | INFO     | will attempt to kill all subprocesses of pid=63351
[2025-10-12 13:14:34] 2025-10-12 17:13:47,029 | INFO     | process IDs to be killed: [63351] (in reverse order)
[2025-10-12 13:14:34] 2025-10-12 17:13:47,083 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:14:34] 2025-10-12 17:13:47,083 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:14:34] 2025-10-12 17:13:47,088 | INFO     | did not find any defunct processes belonging to 63351
[2025-10-12 13:14:34] 2025-10-12 17:13:47,091 | INFO     | did not find any defunct processes belonging to 63351
[2025-10-12 13:14:34] 2025-10-12 17:13:47,091 | INFO     | ready for new job
[2025-10-12 13:14:34] 2025-10-12 17:13:47,091 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:14:34] 2025-10-12 17:13:47,093 | INFO     | ***************************************
[2025-10-12 13:14:34] 2025-10-12 17:13:47,093 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:14:34] 2025-10-12 17:13:47,093 | INFO     | ***************************************
[2025-10-12 13:14:34] 2025-10-12 17:13:47,093 | INFO     | 
[2025-10-12 13:14:34] 2025-10-12 17:13:47,094 | INFO     | architecture information:
[2025-10-12 13:14:34] 2025-10-12 17:13:47,094 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:14:34] 2025-10-12 17:13:47,106 | INFO     | cat /etc/os-release:
[2025-10-12 13:14:34] NAME="CentOS Linux"
[2025-10-12 13:14:34] VERSION="7 (Core)"
[2025-10-12 13:14:34] ID="centos"
[2025-10-12 13:14:34] ID_LIKE="rhel fedora"
[2025-10-12 13:14:34] VERSION_ID="7"
[2025-10-12 13:14:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:14:34] ANSI_COLOR="0;31"
[2025-10-12 13:14:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:14:34] HOME_URL="https://www.centos.org/"
[2025-10-12 13:14:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:14:34] 
[2025-10-12 13:14:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:14:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:14:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:14:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:14:34] 
[2025-10-12 13:14:34] 2025-10-12 17:13:47,107 | INFO     | ***************************************
[2025-10-12 13:14:34] 2025-10-12 17:13:47,610 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2025-10-12 13:14:34] 2025-10-12 17:13:47,623 | INFO     | sufficient remaining disk space (148394475520 B)
[2025-10-12 13:14:34] 2025-10-12 17:13:47,623 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:14:34] 2025-10-12 17:13:47,623 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:14:34] 2025-10-12 17:13:47,623 | INFO     | update_server=False
[2025-10-12 13:14:34] 2025-10-12 17:13:47,623 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:14:34] 2025-10-12 17:13:47,623 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:14:34] 2025-10-12 17:13:47,624 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:14:34] 2025-10-12 17:13:48,067 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 13:14:34] 2025-10-12 17:13:48,067 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 13:14:34] 2025-10-12 17:13:48,067 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:14:34] 2025-10-12 17:13:48,067 | INFO     | will abort loop
[2025-10-12 13:14:34] 2025-10-12 17:13:48,361 | INFO     | all data control threads have been joined
[2025-10-12 13:14:34] 2025-10-12 17:13:48,586 | INFO     | all job control threads have been joined
[2025-10-12 13:14:34] 2025-10-12 17:13:48,629 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:14:34] 2025-10-12 17:13:48,629 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:14:34] 2025-10-12 17:13:48,648 | INFO     | all payload control threads have been joined
[2025-10-12 13:14:34] 2025-10-12 17:13:49,072 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:14:34] 2025-10-12 17:13:49,214 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:14:34] 2025-10-12 17:13:49,367 | INFO     | [data] control thread has finished
[2025-10-12 13:14:34] 2025-10-12 17:13:49,461 | INFO     | [job] validate thread has finished
[2025-10-12 13:14:34] 2025-10-12 17:13:49,593 | INFO     | [job] control thread has finished
[2025-10-12 13:14:34] 2025-10-12 17:13:49,628 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:14:34] 2025-10-12 17:13:49,641 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:14:34] 2025-10-12 17:13:49,653 | INFO     | [payload] control thread has finished
[2025-10-12 13:14:34] 2025-10-12 17:13:49,666 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:14:34] 2025-10-12 17:13:49,839 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:14:34] 2025-10-12 17:13:49,841 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:14:34] 2025-10-12 17:13:50,053 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:14:34] 2025-10-12 17:13:50,214 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:14:34] 2025-10-12 17:13:54,219 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:14:34] 2025-10-12 17:13:57,935 | INFO     | job.realtimelogging is not enabled
[2025-10-12 13:14:34] 2025-10-12 17:13:58,940 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:14:34] 2025-10-12 17:14:18,127 | INFO     | PID=56708 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 13:14:34] 2025-10-12 17:14:18,127 | INFO     | .. there are 8 such processes running
[2025-10-12 13:14:34] 2025-10-12 17:14:18,128 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:14:34] 2025-10-12 17:14:18,128 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:14:34] 2025-10-12 17:14:18,128 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:14:34] 2025-10-12 17:14:29,404 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:14:34] 2025-10-12 17:14:29,502 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123843383056192)>', '<ExcThread(monitor, started 123842714375936)>']
[2025-10-12 13:14:34] 2025-10-12 17:14:30,189 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:14:34] 2025-10-12 17:14:30,189 | INFO     | [monitor] control thread has ended
[2025-10-12 13:14:34] 2025-10-12 17:14:34,530 | INFO     | all workflow threads have been joined
[2025-10-12 13:14:34] 2025-10-12 17:14:34,530 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:14:34] 2025-10-12 17:14:34,530 | INFO     | traces error code: 0
[2025-10-12 13:14:34] 2025-10-12 17:14:34,530 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:14:34] 2025-10-12 17:14:34,637 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:14:34] 2025-10-12 17:14:34,643 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:14:34] 2025-10-12 17:14:34,646 [wrapper] pilotpid: 56708
[2025-10-12 13:14:34] 2025-10-12 17:14:34,649 [wrapper] Pilot exit status: 0
[2025-10-12 13:14:34] 2025-10-12 17:14:34,663 [wrapper] pandaids: 6839821369
[2025-10-12 13:14:34] 2025-10-12 17:14:34,717 [wrapper] cleanup supervisor_pilot  196558 56709
[2025-10-12 13:14:34] ./runpilot2-wrapper.sh: line 615: 196558 Terminated              sleep 900
[2025-10-12 13:14:34] 2025-10-12 17:14:34,725 [wrapper] Test setup, not cleaning
[2025-10-12 13:14:34] 2025-10-12 17:14:34,729 [wrapper] apfmon messages muted
[2025-10-12 13:14:34] 2025-10-12 17:14:34,732 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:14:34] 2025-10-12 17:14:34,739 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:14:34]  *** Error codes and diagnostics ***
[2025-10-12 13:14:34]     "exeErrorCode": 0,
[2025-10-12 13:14:34]     "exeErrorDiag": "",
[2025-10-12 13:14:34]     "pilotErrorCode": 0,
[2025-10-12 13:14:34]     "pilotErrorDiag": "",
[2025-10-12 13:14:34]  *** Listing of results directory ***
[2025-10-12 13:14:34] total 405160
[2025-10-12 13:14:34] -rw-r--r-- 1 boinc boinc    557409 Oct 12 05:04 pilot3.tar.gz
[2025-10-12 13:14:34] -rw-r--r-- 1 boinc boinc      5112 Oct 12 05:06 queuedata.json
[2025-10-12 13:14:34] -rwx------ 1 boinc boinc     36292 Oct 12 05:08 runpilot2-wrapper.sh
[2025-10-12 13:14:34] -rw-r--r-- 1 boinc boinc       100 Oct 12 11:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:14:34] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 11:20 run_atlas
[2025-10-12 13:14:34] -rw-r--r-- 1 boinc boinc       105 Oct 12 11:20 job.xml
[2025-10-12 13:14:34] -rw-r--r-- 2 boinc boinc 220923032 Oct 12 11:20 EVNT.46676267._003562.pool.root.1
[2025-10-12 13:14:34] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:20 start_atlas.sh
[2025-10-12 13:14:34] drwxrwx--x 2 boinc boinc      4096 Oct 12 11:20 shared
[2025-10-12 13:14:34] -rw-r--r-- 2 boinc boinc    569681 Oct 12 11:20 input.tar.gz
[2025-10-12 13:14:34] -rw-r--r-- 1 boinc boinc      9723 Oct 12 11:20 init_data.xml
[2025-10-12 13:14:34] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:20 boinc_setup_complete
[2025-10-12 13:14:34] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:20 boinc_lockfile
[2025-10-12 13:14:34] -rw-r--r-- 1 boinc boinc      2550 Oct 12 11:20 pandaJob.out
[2025-10-12 13:14:34] -rw------- 1 boinc boinc    975528 Oct 12 11:20 agis_schedconf.cvmfs.json
[2025-10-12 13:14:34] -rw------- 1 boinc boinc   1560580 Oct 12 11:20 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:14:34] drwx------ 5 boinc boinc      4096 Oct 12 11:20 pilot3
[2025-10-12 13:14:34] -rw-r--r-- 1 boinc boinc       529 Oct 12 13:13 boinc_task_state.xml
[2025-10-12 13:14:34] -rw------- 1 boinc boinc 187421649 Oct 12 13:13 HITS.46676269._075057.pool.root.1
[2025-10-12 13:14:34] -rw------- 1 boinc boinc      1037 Oct 12 13:13 memory_monitor_summary.json
[2025-10-12 13:14:34] -rw------- 1 boinc boinc    323703 Oct 12 13:13 log.46676269._075057.job.log.tgz.1
[2025-10-12 13:14:34] -rw------- 1 boinc boinc      7737 Oct 12 13:13 heartbeat.json
[2025-10-12 13:14:34] -rw-r--r-- 1 boinc boinc      8192 Oct 12 13:14 boinc_mmap_file
[2025-10-12 13:14:34] -rw-r--r-- 1 boinc boinc        27 Oct 12 13:14 wrapper_checkpoint.txt
[2025-10-12 13:14:34] -rw------- 1 boinc boinc        95 Oct 12 13:14 pilot_heartbeat.json
[2025-10-12 13:14:34] -rw------- 1 boinc boinc      5087 Oct 12 13:14 pilotlog.txt
[2025-10-12 13:14:34] -rw------- 1 boinc boinc    990413 Oct 12 13:14 log.46676269._075057.job.log.1
[2025-10-12 13:14:34] -rw------- 1 boinc boinc       357 Oct 12 13:14 output.list
[2025-10-12 13:14:34] -rw-r--r-- 1 boinc boinc       620 Oct 12 13:14 runtime_log
[2025-10-12 13:14:34] -rw------- 1 boinc boinc   1331200 Oct 12 13:14 result.tar.gz
[2025-10-12 13:14:34] -rw-r--r-- 1 boinc boinc      8764 Oct 12 13:14 runtime_log.err
[2025-10-12 13:14:34] -rw------- 1 boinc boinc       644 Oct 12 13:14 hwoNDmNF7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcIjNDmhrG1Xo.diag
[2025-10-12 13:14:34] -rw-r--r-- 1 boinc boinc     20959 Oct 12 13:14 stderr.txt
[2025-10-12 13:14:34] HITS file was successfully produced:
[2025-10-12 13:14:34] -rw------- 1 boinc boinc 187421649 Oct 12 13:13 shared/HITS.pool.root.1
[2025-10-12 13:14:34]  *** Contents of shared directory: ***
[2025-10-12 13:14:34] total 400664
[2025-10-12 13:14:34] -rw-r--r-- 2 boinc boinc 220923032 Oct 12 11:20 ATLAS.root_0
[2025-10-12 13:14:34] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:20 start_atlas.sh
[2025-10-12 13:14:34] -rw-r--r-- 2 boinc boinc    569681 Oct 12 11:20 input.tar.gz
[2025-10-12 13:14:34] -rw------- 1 boinc boinc 187421649 Oct 12 13:13 HITS.pool.root.1
[2025-10-12 13:14:34] -rw------- 1 boinc boinc   1331200 Oct 12 13:14 result.tar.gz
13:14:35 (52870): run_atlas exited; CPU time 27008.150670
13:14:35 (52870): called boinc_finish(0)

</stderr_txt>
]]>

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