Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:30:17 (3929734): wrapper (7.7.26015): starting
09:30:17 (3929734): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 09:30:17] Arguments: --nthreads 8
[2025-10-12 09:30:17] Threads: 8
[2025-10-12 09:30:17] Checking for CVMFS
[2025-10-12 09:30:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:30:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:30:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:30:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:30:18] 2.10.1.0 4440 187133 163312 151621 1 188 16616654 18432000 3656 130560 2 225259385 99.991 7140286 5570 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-12 09:30:18] CVMFS is ok
[2025-10-12 09:30:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:30:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:30:18] Further information can be found at the LHC@home message board.
[2025-10-12 09:30:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:30:18] Checking for apptainer binary...
[2025-10-12 09:30:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:30:18] Running /usr/bin/apptainer --version
[2025-10-12 09:30:18] apptainer version 1.1.9-1.el8
[2025-10-12 09:30:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:30:19] c-16-31.aglt2.org
[2025-10-12 09:30:19] apptainer works
[2025-10-12 09:30:19] Set ATHENA_PROC_NUMBER=8
[2025-10-12 09:30:19] Set ATHENA_CORE_NUMBER=8
[2025-10-12 09:30:19] Starting ATLAS job with PandaID=6829210703
[2025-10-12 09:30:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:06:53]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:06:53] 2025-10-12 16:06:13,542 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:06:53] 2025-10-12 16:06:13,542 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:06:53] 2025-10-12 16:06:13,547 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:06:53] 2025-10-12 16:06:13,547 | INFO     | sum of square deviations: 1110539892.0
[2025-10-12 12:06:53] 2025-10-12 16:06:13,548 | INFO     | sum of deviations: 26118726667.0
[2025-10-12 12:06:53] 2025-10-12 16:06:13,549 | INFO     | mean x: 1760280492.0
[2025-10-12 12:06:53] 2025-10-12 16:06:13,549 | INFO     | mean y: 2501048.4640522874
[2025-10-12 12:06:53] 2025-10-12 16:06:13,549 | INFO     | -- intersect: -41397439069.8512
[2025-10-12 12:06:53] 2025-10-12 16:06:13,549 | INFO     | intersect: -41397439069.8512
[2025-10-12 12:06:53] 2025-10-12 16:06:13,549 | INFO     | chi2: 1.61050383644192
[2025-10-12 12:06:53] 2025-10-12 16:06:13,550 | INFO     | sum of square deviations: 1005179777.0
[2025-10-12 12:06:53] 2025-10-12 16:06:13,551 | INFO     | sum of deviations: 25136052474.0
[2025-10-12 12:06:53] 2025-10-12 16:06:13,551 | INFO     | mean x: 1760280339.5
[2025-10-12 12:06:53] 2025-10-12 16:06:13,551 | INFO     | mean y: 2499624.6756756757
[2025-10-12 12:06:53] 2025-10-12 16:06:13,551 | INFO     | -- intersect: -44015993380.305
[2025-10-12 12:06:53] 2025-10-12 16:06:13,552 | INFO     | intersect: -44015993380.305
[2025-10-12 12:06:53] 2025-10-12 16:06:13,552 | INFO     | chi2: 1.6119840926578362
[2025-10-12 12:06:53] 2025-10-12 16:06:13,552 | INFO     | current chi2=1.6119840926578362 (change=-0.0919126165626846 %)
[2025-10-12 12:06:53] 2025-10-12 16:06:13,552 | INFO     | right removable region: 147
[2025-10-12 12:06:53] 2025-10-12 16:06:13,553 | INFO     | sum of square deviations: 1005179777.0
[2025-10-12 12:06:53] 2025-10-12 16:06:13,554 | INFO     | sum of deviations: 205340335.00000015
[2025-10-12 12:06:53] 2025-10-12 16:06:13,554 | INFO     | mean x: 1760280644.5
[2025-10-12 12:06:53] 2025-10-12 16:06:13,554 | INFO     | mean y: 2538083.7702702703
[2025-10-12 12:06:53] 2025-10-12 16:06:13,554 | INFO     | -- intersect: -357055916.732235
[2025-10-12 12:06:53] 2025-10-12 16:06:13,554 | INFO     | intersect: -357055916.732235
[2025-10-12 12:06:53] 2025-10-12 16:06:13,555 | INFO     | chi2: 0.04607673969162268
[2025-10-12 12:06:53] 2025-10-12 16:06:13,555 | INFO     | current chi2=0.04607673969162268 (change=97.13898603349995 %)
[2025-10-12 12:06:53] 2025-10-12 16:06:13,555 | INFO     | sum of square deviations: 906703512.0
[2025-10-12 12:06:53] 2025-10-12 16:06:13,556 | INFO     | sum of deviations: -2701589960.0000005
[2025-10-12 12:06:53] 2025-10-12 16:06:13,557 | INFO     | mean x: 1760280797.0
[2025-10-12 12:06:53] 2025-10-12 16:06:13,557 | INFO     | mean y: 2542502.769230769
[2025-10-12 12:06:53] 2025-10-12 16:06:13,557 | INFO     | -- intersect: 5247428912.733858
[2025-10-12 12:06:53] 2025-10-12 16:06:13,557 | INFO     | intersect: 5247428912.733858
[2025-10-12 12:06:53] 2025-10-12 16:06:13,557 | INFO     | chi2: 0.01629772639741476
[2025-10-12 12:06:53] 2025-10-12 16:06:13,558 | INFO     | current chi2=0.01629772639741476 (change=64.62916754420911 %)
[2025-10-12 12:06:53] 2025-10-12 16:06:13,558 | INFO     | sum of square deviations: 814878534.5
[2025-10-12 12:06:53] 2025-10-12 16:06:13,559 | INFO     | sum of deviations: -2052511926.4999998
[2025-10-12 12:06:53] 2025-10-12 16:06:13,559 | INFO     | mean x: 1760280949.5
[2025-10-12 12:06:53] 2025-10-12 16:06:13,559 | INFO     | mean y: 2541417.1811594204
[2025-10-12 12:06:53] 2025-10-12 16:06:13,560 | INFO     | -- intersect: 4436328159.467096
[2025-10-12 12:06:53] 2025-10-12 16:06:13,560 | INFO     | intersect: 4436328159.467096
[2025-10-12 12:06:53] 2025-10-12 16:06:13,560 | INFO     | chi2: 0.0159496581345947
[2025-10-12 12:06:53] 2025-10-12 16:06:13,560 | INFO     | current chi2=0.0159496581345947 (change=2.1356860112418716 %)
[2025-10-12 12:06:53] 2025-10-12 16:06:13,560 | INFO     | left removable region: 30
[2025-10-12 12:06:53] 2025-10-12 16:06:13,561 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 12:06:53] 2025-10-12 16:06:13,561 | INFO     | sum of deviations: 1088029245.0
[2025-10-12 12:06:53] 2025-10-12 16:06:13,562 | INFO     | mean x: 1760281224.0
[2025-10-12 12:06:53] 2025-10-12 16:06:13,562 | INFO     | mean y: 2534553.4102564105
[2025-10-12 12:06:53] 2025-10-12 16:06:13,562 | INFO     | -- intersect: -3854187517.7480154
[2025-10-12 12:06:53] 2025-10-12 16:06:13,562 | INFO     | intersect: -3854187517.7480154
[2025-10-12 12:06:53] 2025-10-12 16:06:13,563 | INFO     | chi2: 0.00920802103695999
[2025-10-12 12:06:53] 2025-10-12 16:06:13,563 | INFO     | -- intersect: -3854187517.7480154
[2025-10-12 12:06:53] 2025-10-12 16:06:13,563 | INFO     | current memory leak: 2.19 B/s (using 117 data points, chi2=0.01)
[2025-10-12 12:06:53] 2025-10-12 16:06:13,563 | INFO     | could have reported an average CPU frequency of 2980 MHz (9 samples)
[2025-10-12 12:06:53] 2025-10-12 16:06:13,564 | INFO     | ..............................
[2025-10-12 12:06:53] 2025-10-12 16:06:13,564 | INFO     | . Timing measurements:
[2025-10-12 12:06:53] 2025-10-12 16:06:13,564 | INFO     | . get job = 0 s
[2025-10-12 12:06:53] 2025-10-12 16:06:13,564 | INFO     | . initial setup = 2 s
[2025-10-12 12:06:53] 2025-10-12 16:06:13,564 | INFO     | . payload setup = 5 s
[2025-10-12 12:06:53] 2025-10-12 16:06:13,565 | INFO     | . stage-in = 0 s
[2025-10-12 12:06:53] 2025-10-12 16:06:13,565 | INFO     | . payload execution = 9311 s
[2025-10-12 12:06:53] 2025-10-12 16:06:13,565 | INFO     | . stage-out = 0 s
[2025-10-12 12:06:53] 2025-10-12 16:06:13,565 | INFO     | . log creation = 0 s
[2025-10-12 12:06:53] 2025-10-12 16:06:13,565 | INFO     | ..............................
[2025-10-12 12:06:53] 2025-10-12 16:06:13,669 | INFO     | 
[2025-10-12 12:06:53] 2025-10-12 16:06:13,669 | INFO     | job summary report
[2025-10-12 12:06:53] 2025-10-12 16:06:13,670 | INFO     | --------------------------------------------------
[2025-10-12 12:06:53] 2025-10-12 16:06:13,670 | INFO     | PanDA job id: 6829210703
[2025-10-12 12:06:53] 2025-10-12 16:06:13,670 | INFO     | task id: 46376905
[2025-10-12 12:06:53] 2025-10-12 16:06:13,670 | INFO     | errors: (none)
[2025-10-12 12:06:53] 2025-10-12 16:06:13,670 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:06:53] 2025-10-12 16:06:13,670 | INFO     | pilot state: finished 
[2025-10-12 12:06:53] 2025-10-12 16:06:13,671 | INFO     | transexitcode: 0
[2025-10-12 12:06:53] 2025-10-12 16:06:13,671 | INFO     | exeerrorcode: 0
[2025-10-12 12:06:53] 2025-10-12 16:06:13,671 | INFO     | exeerrordiag: 
[2025-10-12 12:06:53] 2025-10-12 16:06:13,671 | INFO     | exitcode: 0
[2025-10-12 12:06:53] 2025-10-12 16:06:13,671 | INFO     | exitmsg: OK
[2025-10-12 12:06:53] 2025-10-12 16:06:13,671 | INFO     | cpuconsumptiontime: 66270 s
[2025-10-12 12:06:53] 2025-10-12 16:06:13,672 | INFO     | nevents: 400
[2025-10-12 12:06:53] 2025-10-12 16:06:13,672 | INFO     | neventsw: 0
[2025-10-12 12:06:53] 2025-10-12 16:06:13,672 | INFO     | pid: 3954032
[2025-10-12 12:06:53] 2025-10-12 16:06:13,672 | INFO     | pgrp: 3954032
[2025-10-12 12:06:53] 2025-10-12 16:06:13,672 | INFO     | corecount: 8
[2025-10-12 12:06:53] 2025-10-12 16:06:13,672 | INFO     | event service: False
[2025-10-12 12:06:53] 2025-10-12 16:06:13,672 | INFO     | sizes: {0: 2348816, 1: 2348816, 4: 2349106, 12: 2349134, 9321: 2377577, 9323: 2386575, 9324: 2386759, 9327: 2387017}
[2025-10-12 12:06:53] 2025-10-12 16:06:13,673 | INFO     | --------------------------------------------------
[2025-10-12 12:06:53] 2025-10-12 16:06:13,673 | INFO     | 
[2025-10-12 12:06:53] 2025-10-12 16:06:13,673 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 12:06:53] 2025-10-12 16:06:13,690 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:06:53] 2025-10-12 16:06:13,690 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:06:53] 2025-10-12 16:06:13,690 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:06:53] 2025-10-12 16:06:13,690 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:06:53] 2025-10-12 16:06:13,691 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:06:53] 2025-10-12 16:06:13,691 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:06:53] 2025-10-12 16:06:13,691 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:06:53] 2025-10-12 16:06:13,691 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:06:53] 2025-10-12 16:06:13,691 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:06:53] 2025-10-12 16:06:13,691 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:06:53] 2025-10-12 16:06:13,691 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:06:53] 2025-10-12 16:06:13,691 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:06:53] 2025-10-12 16:06:13,691 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:06:53] 2025-10-12 16:06:13,691 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:06:53] 2025-10-12 16:06:13,692 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:06:53] 2025-10-12 16:06:13,692 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:06:53] 2025-10-12 16:06:13,692 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:06:53] 2025-10-12 16:06:13,692 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:06:53] 2025-10-12 16:06:13,692 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:06:53] 2025-10-12 16:06:13,692 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:06:53] 2025-10-12 16:06:13,692 | INFO     | job 6829210703 has completed (purged errors)
[2025-10-12 12:06:53] 2025-10-12 16:06:13,692 | INFO     | overall cleanup function is called
[2025-10-12 12:06:53] 2025-10-12 16:06:14,699 | INFO     | --- collectZombieJob: --- 10, [3954032]
[2025-10-12 12:06:53] 2025-10-12 16:06:14,699 | INFO     | zombie collector waiting for pid 3954032
[2025-10-12 12:06:53] 2025-10-12 16:06:14,699 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:06:53] 2025-10-12 16:06:14,699 | INFO     | collected zombie processes
[2025-10-12 12:06:53] 2025-10-12 16:06:14,700 | INFO     | will attempt to kill all subprocesses of pid=3954032
[2025-10-12 12:06:53] 2025-10-12 16:06:14,892 | INFO     | process IDs to be killed: [3954032] (in reverse order)
[2025-10-12 12:06:53] 2025-10-12 16:06:14,979 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:06:53] 2025-10-12 16:06:14,979 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:06:53] 2025-10-12 16:06:14,995 | INFO     | did not find any defunct processes belonging to 3954032
[2025-10-12 12:06:53] 2025-10-12 16:06:15,008 | INFO     | did not find any defunct processes belonging to 3954032
[2025-10-12 12:06:53] 2025-10-12 16:06:15,008 | INFO     | ready for new job
[2025-10-12 12:06:53] 2025-10-12 16:06:15,009 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:06:53] 2025-10-12 16:06:15,011 | INFO     | ***************************************
[2025-10-12 12:06:53] 2025-10-12 16:06:15,011 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-12 12:06:53] 2025-10-12 16:06:15,011 | INFO     | ***************************************
[2025-10-12 12:06:53] 2025-10-12 16:06:15,011 | INFO     | 
[2025-10-12 12:06:53] 2025-10-12 16:06:15,025 | INFO     | architecture information:
[2025-10-12 12:06:53] 2025-10-12 16:06:15,025 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:06:53] 2025-10-12 16:06:15,037 | INFO     | cat /etc/os-release:
[2025-10-12 12:06:53] NAME="CentOS Linux"
[2025-10-12 12:06:53] VERSION="7 (Core)"
[2025-10-12 12:06:53] ID="centos"
[2025-10-12 12:06:53] ID_LIKE="rhel fedora"
[2025-10-12 12:06:53] VERSION_ID="7"
[2025-10-12 12:06:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:06:53] ANSI_COLOR="0;31"
[2025-10-12 12:06:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:06:53] HOME_URL="https://www.centos.org/"
[2025-10-12 12:06:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:06:53] 
[2025-10-12 12:06:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:06:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:06:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:06:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:06:53] 
[2025-10-12 12:06:53] 2025-10-12 16:06:15,038 | INFO     | ***************************************
[2025-10-12 12:06:53] 2025-10-12 16:06:15,541 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 12:06:53] 2025-10-12 16:06:15,556 | INFO     | sufficient remaining disk space (103314096128 B)
[2025-10-12 12:06:53] 2025-10-12 16:06:15,557 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:06:53] 2025-10-12 16:06:15,557 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:06:53] 2025-10-12 16:06:15,557 | INFO     | update_server=False
[2025-10-12 12:06:53] 2025-10-12 16:06:15,557 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:06:53] 2025-10-12 16:06:15,558 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:06:53] 2025-10-12 16:06:15,558 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:06:53] 2025-10-12 16:06:15,558 | INFO     | aborting loop
[2025-10-12 12:06:53] 2025-10-12 16:06:15,628 | INFO     | all job control threads have been joined
[2025-10-12 12:06:53] 2025-10-12 16:06:16,139 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:06:53] 2025-10-12 16:06:16,149 | INFO     | all data control threads have been joined
[2025-10-12 12:06:53] 2025-10-12 16:06:16,563 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:06:53] 2025-10-12 16:06:16,564 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:06:53] 2025-10-12 16:06:16,564 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:06:53] 2025-10-12 16:06:16,568 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:06:53] 2025-10-12 16:06:16,634 | INFO     | [job] control thread has finished
[2025-10-12 12:06:53] 2025-10-12 16:06:16,661 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:06:53] 2025-10-12 16:06:16,753 | INFO     | all payload control threads have been joined
[2025-10-12 12:06:53] 2025-10-12 16:06:16,865 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:06:53] 2025-10-12 16:06:16,961 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:06:53] 2025-10-12 16:06:17,154 | INFO     | [data] control thread has finished
[2025-10-12 12:06:53] 2025-10-12 16:06:17,169 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:06:53] 2025-10-12 16:06:17,758 | INFO     | [payload] control thread has finished
[2025-10-12 12:06:53] 2025-10-12 16:06:17,909 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:06:53] 2025-10-12 16:06:17,923 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:06:53] 2025-10-12 16:06:18,055 | INFO     | [job] validate thread has finished
[2025-10-12 12:06:53] 2025-10-12 16:06:18,870 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:06:53] 2025-10-12 16:06:20,145 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:06:53] 2025-10-12 16:06:25,898 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:06:53] 2025-10-12 16:06:26,902 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:06:53] 2025-10-12 16:06:45,555 | INFO     | PID=3936486 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:06:53] 2025-10-12 16:06:45,555 | INFO     | .. there are 5 such processes running
[2025-10-12 12:06:53] 2025-10-12 16:06:45,555 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:06:53] 2025-10-12 16:06:45,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:06:53] 2025-10-12 16:06:45,555 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:06:53] 2025-10-12 16:06:45,933 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:06:53] 2025-10-12 16:06:47,833 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140182046230336)>', '<ExcThread(monitor, started 140181466236672)>']
[2025-10-12 12:06:53] 2025-10-12 16:06:48,570 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:06:53] 2025-10-12 16:06:48,570 | INFO     | [monitor] control thread has ended
[2025-10-12 12:06:53] 2025-10-12 16:06:52,858 | INFO     | all workflow threads have been joined
[2025-10-12 12:06:53] 2025-10-12 16:06:52,858 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:06:53] 2025-10-12 16:06:52,858 | INFO     | traces error code: 0
[2025-10-12 12:06:53] 2025-10-12 16:06:52,858 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:06:53] 2025-10-12 16:06:52,928 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:06:53] 2025-10-12 16:06:52,930 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:06:53] 2025-10-12 16:06:52,932 [wrapper] pilotpid: 3936486
[2025-10-12 12:06:53] 2025-10-12 16:06:52,934 [wrapper] Pilot exit status: 0
[2025-10-12 12:06:53] 2025-10-12 16:06:52,940 [wrapper] pandaids: 6829210703
[2025-10-12 12:06:53] 2025-10-12 16:06:52,981 [wrapper] cleanup supervisor_pilot 1937264 3936487
[2025-10-12 12:06:53] 2025-10-12 16:06:52,983 [wrapper] Test setup, not cleaning
[2025-10-12 12:06:53] 2025-10-12 16:06:52,985 [wrapper] apfmon messages muted
[2025-10-12 12:06:53] 2025-10-12 16:06:52,987 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:06:53] 2025-10-12 16:06:52,989 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:06:53]  *** Error codes and diagnostics ***
[2025-10-12 12:06:53]     "exeErrorCode": 0,
[2025-10-12 12:06:53]     "exeErrorDiag": "",
[2025-10-12 12:06:53]     "pilotErrorCode": 0,
[2025-10-12 12:06:53]     "pilotErrorDiag": "",
[2025-10-12 12:06:53]  *** Listing of results directory ***
[2025-10-12 12:06:53] total 391540
[2025-10-12 12:06:53] -rw-r--r-- 1 boincer umatlas    552446 Oct  4 00:15 pilot3.tar.gz
[2025-10-12 12:06:53] -rw-r--r-- 1 boincer umatlas      5112 Oct  4 00:17 queuedata.json
[2025-10-12 12:06:53] -rwx------ 1 boincer umatlas     36292 Oct  4 00:17 runpilot2-wrapper.sh
[2025-10-12 12:06:53] -rw-r--r-- 1 boincer umatlas       100 Oct 12 09:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:06:53] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 09:30 run_atlas
[2025-10-12 12:06:53] -rw-r--r-- 1 boincer umatlas       105 Oct 12 09:30 job.xml
[2025-10-12 12:06:53] -rw-r--r-- 2 boincer umatlas 215890082 Oct 12 09:30 EVNT.46376901._001864.pool.root.1
[2025-10-12 12:06:53] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:30 start_atlas.sh
[2025-10-12 12:06:53] drwxrwx--x 2 boincer umatlas      4096 Oct 12 09:30 shared
[2025-10-12 12:06:53] -rw-r--r-- 2 boincer umatlas    565602 Oct 12 09:30 input.tar.gz
[2025-10-12 12:06:53] -rw-r--r-- 1 boincer umatlas         0 Oct 12 09:30 boinc_lockfile
[2025-10-12 12:06:53] -rw-r--r-- 1 boincer umatlas      2519 Oct 12 09:30 pandaJob.out
[2025-10-12 12:06:53] -rw------- 1 boincer umatlas    975528 Oct 12 09:30 agis_schedconf.cvmfs.json
[2025-10-12 12:06:53] -rw------- 1 boincer umatlas   1560580 Oct 12 09:30 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:06:53] drwx------ 4 boincer umatlas      4096 Oct 12 09:30 pilot3
[2025-10-12 12:06:53] -rw-r--r-- 1 boincer umatlas      6013 Oct 12 12:03 init_data.xml
[2025-10-12 12:06:53] -rw------- 1 boincer umatlas 177706374 Oct 12 12:05 HITS.46376905._052506.pool.root.1
[2025-10-12 12:06:53] -rw-r--r-- 1 boincer umatlas       529 Oct 12 12:05 boinc_task_state.xml
[2025-10-12 12:06:53] -rw------- 1 boincer umatlas      1049 Oct 12 12:06 memory_monitor_summary.json
[2025-10-12 12:06:53] -rw------- 1 boincer umatlas        95 Oct 12 12:06 pilot_heartbeat.json
[2025-10-12 12:06:53] -rw------- 1 boincer umatlas    403639 Oct 12 12:06 log.46376905._052506.job.log.tgz.1
[2025-10-12 12:06:53] -rw------- 1 boincer umatlas      7827 Oct 12 12:06 heartbeat.json
[2025-10-12 12:06:53] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 12:06 boinc_mmap_file
[2025-10-12 12:06:53] -rw-r--r-- 1 boincer umatlas        27 Oct 12 12:06 wrapper_checkpoint.txt
[2025-10-12 12:06:53] -rw------- 1 boincer umatlas      4896 Oct 12 12:06 pilotlog.txt
[2025-10-12 12:06:53] -rw------- 1 boincer umatlas   1320496 Oct 12 12:06 log.46376905._052506.job.log.1
[2025-10-12 12:06:53] -rw------- 1 boincer umatlas       357 Oct 12 12:06 output.list
[2025-10-12 12:06:53] -rw-r--r-- 1 boincer umatlas       620 Oct 12 12:06 runtime_log
[2025-10-12 12:06:53] -rw------- 1 boincer umatlas   1740800 Oct 12 12:06 result.tar.gz
[2025-10-12 12:06:53] -rw------- 1 boincer umatlas       656 Oct 12 12:06 uL2MDmAt8O8n9Rq4apOajLDm4fhM0noT9bVof3QYDmMrCMDmBKPSGo.diag
[2025-10-12 12:06:53] -rw-r--r-- 1 boincer umatlas      8698 Oct 12 12:06 runtime_log.err
[2025-10-12 12:06:53] -rw-r--r-- 1 boincer umatlas     20883 Oct 12 12:06 stderr.txt
[2025-10-12 12:06:53] HITS file was successfully produced:
[2025-10-12 12:06:53] -rw------- 1 boincer umatlas 177706374 Oct 12 12:05 shared/HITS.pool.root.1
[2025-10-12 12:06:53]  *** Contents of shared directory: ***
[2025-10-12 12:06:53] total 386656
[2025-10-12 12:06:53] -rw-r--r-- 2 boincer umatlas 215890082 Oct 12 09:30 ATLAS.root_0
[2025-10-12 12:06:53] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:30 start_atlas.sh
[2025-10-12 12:06:53] -rw-r--r-- 2 boincer umatlas    565602 Oct 12 09:30 input.tar.gz
[2025-10-12 12:06:53] -rw------- 1 boincer umatlas 177706374 Oct 12 12:05 HITS.pool.root.1
[2025-10-12 12:06:53] -rw------- 1 boincer umatlas   1740800 Oct 12 12:06 result.tar.gz
12:06:54 (3929734): run_atlas exited; CPU time 66518.113884
12:06:54 (3929734): called boinc_finish(0)

</stderr_txt>
]]>

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