Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:26:20 (6241): wrapper (7.7.26015): starting
09:26:20 (6241): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 09:26:20] Arguments: --nthreads 8
[2025-10-12 09:26:20] Threads: 8
[2025-10-12 09:26:20] Checking for CVMFS
[2025-10-12 09:26:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:26:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:26:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:26:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:26:20] 2.11.2.0 1598 216261 125704 151621 1 57 10451172 20275201 917 130560 1 221609735 99.992 11705867 11177 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 09:26:20] CVMFS is ok
[2025-10-12 09:26:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:26:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:26:20] Further information can be found at the LHC@home message board.
[2025-10-12 09:26:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:26:20] Checking for apptainer binary...
[2025-10-12 09:26:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:26:20] Running /usr/bin/apptainer --version
[2025-10-12 09:26:21] apptainer version 1.3.2-1.el7
[2025-10-12 09:26:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:26:21] c-205-36.aglt2.org
[2025-10-12 09:26:21] apptainer works
[2025-10-12 09:26:21] Set ATHENA_PROC_NUMBER=8
[2025-10-12 09:26:21] Set ATHENA_CORE_NUMBER=8
[2025-10-12 09:26:21] Starting ATLAS job with PandaID=6839636997
[2025-10-12 09:26:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:36:46]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:36:46]  scope=mc23_13p6TeV
[2025-10-12 10:36:46]  status=None
[2025-10-12 10:36:46]  status_code=0
[2025-10-12 10:36:46]  storage_token=
[2025-10-12 10:36:46]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6839636997/log.46676269._073255.job.log.tgz.1
[2025-10-12 10:36:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/d7/log.46676269._073255.job.log.tgz.1
[2025-10-12 10:36:46]  workdir=None
[2025-10-12 10:36:46] ]
[2025-10-12 10:36:46] 2025-10-12 14:35:51,086 | INFO     | transferring file log.46676269._073255.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6839636997/log.46676269._073255.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 10:36:46] 2025-10-12 14:35:51,086 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6839636997/log.46676269._073255.job.log.tgz.1 /tmp/boinchome/slots/1/log.46676269._073255.job
[2025-10-12 10:36:46] 2025-10-12 14:35:51,103 | INFO     | adding to output.list: log.46676269._073255.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/d7/log.46676269._073255.job.log.tg
[2025-10-12 10:36:46] 2025-10-12 14:35:51,103 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 10:36:46] 2025-10-12 14:35:51,103 | INFO     | summary of transferred files:
[2025-10-12 10:36:46] 2025-10-12 14:35:51,103 | INFO     |  -- lfn=log.46676269._073255.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 10:36:46] 2025-10-12 14:35:51,104 | INFO     | stage-out finished correctly
[2025-10-12 10:36:46] 2025-10-12 14:35:52,140 | INFO     | time since job start (4158s) is within the limit (172800.0s)
[2025-10-12 10:36:46] 2025-10-12 14:35:52,543 | INFO     | monitor loop #310: job 0:6839636997 is in state 'finished'
[2025-10-12 10:36:46] 2025-10-12 14:35:52,543 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:36:46] 2025-10-12 14:35:52,650 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 10:36:46] 2025-10-12 14:35:54,146 | INFO     | time since job start (4160s) is within the limit (172800.0s)
[2025-10-12 10:36:46] 2025-10-12 14:35:54,687 | INFO     | job 6839636997 has state=finished
[2025-10-12 10:36:46] 2025-10-12 14:35:54,688 | INFO     | preparing for final server update for job 6839636997 in state='finished'
[2025-10-12 10:36:46] 2025-10-12 14:35:54,688 | INFO     | this job has now completed (state=finished)
[2025-10-12 10:36:46] 2025-10-12 14:35:54,688 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 10:36:46] 2025-10-12 14:35:54,688 | INFO     | log transfer has been attempted: DONE
[2025-10-12 10:36:46] 2025-10-12 14:35:54,689 | INFO     | job 6839636997 has finished - writing final server update
[2025-10-12 10:36:46] 2025-10-12 14:35:54,689 | INFO     | total number of processed events: 400 (read)
[2025-10-12 10:36:46] 2025-10-12 14:35:54,690 | INFO     | executing command: lscpu
[2025-10-12 10:36:46] 2025-10-12 14:35:54,724 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 10:36:46] 2025-10-12 14:35:55,046 | INFO     | monitor loop #311: job 0:6839636997 is in state 'finished'
[2025-10-12 10:36:46] 2025-10-12 14:35:55,047 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:36:46] 2025-10-12 14:35:56,151 | INFO     | time since job start (4162s) is within the limit (172800.0s)
[2025-10-12 10:36:46] 2025-10-12 14:35:57,549 | INFO     | monitor loop #312: job 0:6839636997 is in state 'finished'
[2025-10-12 10:36:46] 2025-10-12 14:35:57,549 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:36:46] 2025-10-12 14:35:58,155 | INFO     | time since job start (4164s) is within the limit (172800.0s)
[2025-10-12 10:36:46] 2025-10-12 14:35:58,801 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 10:36:46] 2025-10-12 14:35:58,806 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2109.8598125000003
[2025-10-12 10:36:46] 2025-10-12 14:35:58,809 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6839636997/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 10:36:46] 2025-10-12 14:35:58,810 | INFO     | extracted standard info from prmon json
[2025-10-12 10:36:46] 2025-10-12 14:35:58,810 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:36:46] 2025-10-12 14:35:58,811 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:36:46] 2025-10-12 14:35:58,811 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:36:46] 2025-10-12 14:35:58,811 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:36:46] 2025-10-12 14:35:58,813 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:36:46] 2025-10-12 14:35:58,813 | INFO     | sum of square deviations: 70364110.0
[2025-10-12 10:36:46] 2025-10-12 14:35:58,814 | INFO     | sum of deviations: -7649152096.0
[2025-10-12 10:36:46] 2025-10-12 14:35:58,814 | INFO     | mean x: 1760277754.0
[2025-10-12 10:36:46] 2025-10-12 14:35:58,814 | INFO     | mean y: 2661446.4590163934
[2025-10-12 10:36:46] 2025-10-12 14:35:58,814 | INFO     | -- intersect: 191359196355.39587
[2025-10-12 10:36:46] 2025-10-12 14:35:58,814 | INFO     | intersect: 191359196355.39587
[2025-10-12 10:36:46] 2025-10-12 14:35:58,814 | INFO     | chi2: 0.0488609671965712
[2025-10-12 10:36:46] 2025-10-12 14:35:58,815 | INFO     | -- intersect: 191359196355.39587
[2025-10-12 10:36:46] 2025-10-12 14:35:58,815 | INFO     | current memory leak: -108.71 B/s (using 61 data points, chi2=0.05)
[2025-10-12 10:36:46] 2025-10-12 14:35:58,815 | INFO     | could have reported an average CPU frequency of 2258 MHz (6 samples)
[2025-10-12 10:36:46] 2025-10-12 14:35:58,815 | INFO     | ..............................
[2025-10-12 10:36:46] 2025-10-12 14:35:58,815 | INFO     | . Timing measurements:
[2025-10-12 10:36:46] 2025-10-12 14:35:58,816 | INFO     | . get job = 0 s
[2025-10-12 10:36:46] 2025-10-12 14:35:58,816 | INFO     | . initial setup = 2 s
[2025-10-12 10:36:46] 2025-10-12 14:35:58,816 | INFO     | . payload setup = 6 s
[2025-10-12 10:36:46] 2025-10-12 14:35:58,816 | INFO     | . stage-in = 0 s
[2025-10-12 10:36:46] 2025-10-12 14:35:58,816 | INFO     | . payload execution = 4131 s
[2025-10-12 10:36:46] 2025-10-12 14:35:58,816 | INFO     | . stage-out = 0 s
[2025-10-12 10:36:46] 2025-10-12 14:35:58,816 | INFO     | . log creation = 0 s
[2025-10-12 10:36:46] 2025-10-12 14:35:58,816 | INFO     | ..............................
[2025-10-12 10:36:46] 2025-10-12 14:35:58,895 | INFO     | 
[2025-10-12 10:36:46] 2025-10-12 14:35:58,896 | INFO     | job summary report
[2025-10-12 10:36:46] 2025-10-12 14:35:58,896 | INFO     | --------------------------------------------------
[2025-10-12 10:36:46] 2025-10-12 14:35:58,896 | INFO     | PanDA job id: 6839636997
[2025-10-12 10:36:46] 2025-10-12 14:35:58,896 | INFO     | task id: 46676269
[2025-10-12 10:36:46] 2025-10-12 14:35:58,896 | INFO     | errors: (none)
[2025-10-12 10:36:46] 2025-10-12 14:35:58,896 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:36:46] 2025-10-12 14:35:58,896 | INFO     | pilot state: finished 
[2025-10-12 10:36:46] 2025-10-12 14:35:58,896 | INFO     | transexitcode: 0
[2025-10-12 10:36:46] 2025-10-12 14:35:58,897 | INFO     | exeerrorcode: 0
[2025-10-12 10:36:46] 2025-10-12 14:35:58,897 | INFO     | exeerrordiag: 
[2025-10-12 10:36:46] 2025-10-12 14:35:58,897 | INFO     | exitcode: 0
[2025-10-12 10:36:46] 2025-10-12 14:35:58,897 | INFO     | exitmsg: OK
[2025-10-12 10:36:46] 2025-10-12 14:35:58,897 | INFO     | cpuconsumptiontime: 30275 s
[2025-10-12 10:36:46] 2025-10-12 14:35:58,897 | INFO     | nevents: 400
[2025-10-12 10:36:46] 2025-10-12 14:35:58,897 | INFO     | neventsw: 0
[2025-10-12 10:36:46] 2025-10-12 14:35:58,897 | INFO     | pid: 16286
[2025-10-12 10:36:46] 2025-10-12 14:35:58,897 | INFO     | pgrp: 16286
[2025-10-12 10:36:46] 2025-10-12 14:35:58,898 | INFO     | corecount: 8
[2025-10-12 10:36:46] 2025-10-12 14:35:58,898 | INFO     | event service: False
[2025-10-12 10:36:46] 2025-10-12 14:35:58,898 | INFO     | sizes: {0: 2348630, 1: 2348885, 5: 2349147, 11: 2349203, 4140: 2375209, 4141: 2384207, 4143: 2384391, 4149: 2384585}
[2025-10-12 10:36:46] 2025-10-12 14:35:58,898 | INFO     | --------------------------------------------------
[2025-10-12 10:36:46] 2025-10-12 14:35:58,898 | INFO     | 
[2025-10-12 10:36:46] 2025-10-12 14:35:58,898 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 10:36:46] 2025-10-12 14:35:58,919 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:36:46] 2025-10-12 14:35:58,919 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:36:46] 2025-10-12 14:35:58,919 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:36:46] 2025-10-12 14:35:58,919 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:36:46] 2025-10-12 14:35:58,919 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:36:46] 2025-10-12 14:35:58,920 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:36:46] 2025-10-12 14:35:58,920 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:36:46] 2025-10-12 14:35:58,920 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:36:46] 2025-10-12 14:35:58,920 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:36:46] 2025-10-12 14:35:58,920 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:36:46] 2025-10-12 14:35:58,920 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:36:46] 2025-10-12 14:35:58,920 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:36:46] 2025-10-12 14:35:58,920 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:36:46] 2025-10-12 14:35:58,920 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:36:46] 2025-10-12 14:35:58,921 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:36:46] 2025-10-12 14:35:58,921 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:36:46] 2025-10-12 14:35:58,921 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:36:46] 2025-10-12 14:35:58,921 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:36:46] 2025-10-12 14:35:58,921 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:36:46] 2025-10-12 14:35:58,921 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:36:46] 2025-10-12 14:35:58,921 | INFO     | job 6839636997 has completed (purged errors)
[2025-10-12 10:36:46] 2025-10-12 14:35:58,922 | INFO     | overall cleanup function is called
[2025-10-12 10:36:46] 2025-10-12 14:35:59,930 | INFO     | --- collectZombieJob: --- 10, [16286]
[2025-10-12 10:36:46] 2025-10-12 14:35:59,930 | INFO     | zombie collector waiting for pid 16286
[2025-10-12 10:36:46] 2025-10-12 14:35:59,930 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:36:46] 2025-10-12 14:35:59,931 | INFO     | collected zombie processes
[2025-10-12 10:36:46] 2025-10-12 14:35:59,931 | INFO     | will attempt to kill all subprocesses of pid=16286
[2025-10-12 10:36:46] 2025-10-12 14:36:00,050 | INFO     | process IDs to be killed: [16286] (in reverse order)
[2025-10-12 10:36:46] 2025-10-12 14:36:00,106 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:36:46] 2025-10-12 14:36:00,107 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:36:46] 2025-10-12 14:36:00,111 | INFO     | did not find any defunct processes belonging to 16286
[2025-10-12 10:36:46] 2025-10-12 14:36:00,115 | INFO     | did not find any defunct processes belonging to 16286
[2025-10-12 10:36:46] 2025-10-12 14:36:00,115 | INFO     | ready for new job
[2025-10-12 10:36:46] 2025-10-12 14:36:00,116 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:36:46] 2025-10-12 14:36:00,117 | INFO     | ***************************************
[2025-10-12 10:36:46] 2025-10-12 14:36:00,118 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:36:46] 2025-10-12 14:36:00,118 | INFO     | ***************************************
[2025-10-12 10:36:46] 2025-10-12 14:36:00,118 | INFO     | 
[2025-10-12 10:36:46] 2025-10-12 14:36:00,119 | INFO     | architecture information:
[2025-10-12 10:36:46] 2025-10-12 14:36:00,120 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:36:46] 2025-10-12 14:36:00,135 | INFO     | cat /etc/os-release:
[2025-10-12 10:36:46] NAME="CentOS Linux"
[2025-10-12 10:36:46] VERSION="7 (Core)"
[2025-10-12 10:36:46] ID="centos"
[2025-10-12 10:36:46] ID_LIKE="rhel fedora"
[2025-10-12 10:36:46] VERSION_ID="7"
[2025-10-12 10:36:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:36:46] ANSI_COLOR="0;31"
[2025-10-12 10:36:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:36:46] HOME_URL="https://www.centos.org/"
[2025-10-12 10:36:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:36:46] 
[2025-10-12 10:36:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:36:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:36:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:36:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:36:46] 
[2025-10-12 10:36:46] 2025-10-12 14:36:00,135 | INFO     | ***************************************
[2025-10-12 10:36:46] 2025-10-12 14:36:00,636 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 10:36:46] 2025-10-12 14:36:00,655 | INFO     | sufficient remaining disk space (32716619776 B)
[2025-10-12 10:36:46] 2025-10-12 14:36:00,656 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:36:46] 2025-10-12 14:36:00,656 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:36:46] 2025-10-12 14:36:00,656 | INFO     | update_server=False
[2025-10-12 10:36:46] 2025-10-12 14:36:00,656 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:36:46] 2025-10-12 14:36:00,656 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:36:46] 2025-10-12 14:36:00,740 | INFO     | all job control threads have been joined
[2025-10-12 10:36:46] 2025-10-12 14:36:00,753 | INFO     | all payload control threads have been joined
[2025-10-12 10:36:46] 2025-10-12 14:36:01,059 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:36:46] 2025-10-12 14:36:01,059 | INFO     | aborting loop
[2025-10-12 10:36:46] 2025-10-12 14:36:01,564 | INFO     | all data control threads have been joined
[2025-10-12 10:36:46] 2025-10-12 14:36:01,662 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:36:46] 2025-10-12 14:36:01,662 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:36:46] 2025-10-12 14:36:01,685 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:36:46] 2025-10-12 14:36:01,741 | INFO     | [job] control thread has finished
[2025-10-12 10:36:46] 2025-10-12 14:36:01,758 | INFO     | [payload] control thread has finished
[2025-10-12 10:36:46] 2025-10-12 14:36:01,815 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:36:46] 2025-10-12 14:36:02,064 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:36:46] 2025-10-12 14:36:02,570 | INFO     | [data] control thread has finished
[2025-10-12 10:36:46] 2025-10-12 14:36:02,611 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:36:46] 2025-10-12 14:36:02,680 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:36:46] 2025-10-12 14:36:02,695 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:36:46] 2025-10-12 14:36:02,722 | INFO     | [job] validate thread has finished
[2025-10-12 10:36:46] 2025-10-12 14:36:02,974 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:36:46] 2025-10-12 14:36:02,980 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:36:46] 2025-10-12 14:36:03,243 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:36:46] 2025-10-12 14:36:03,688 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:36:46] 2025-10-12 14:36:07,244 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:36:46] 2025-10-12 14:36:11,691 | INFO     | job.realtimelogging is not enabled
[2025-10-12 10:36:46] 2025-10-12 14:36:12,696 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:36:46] 2025-10-12 14:36:31,385 | INFO     | PID=9921 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-12 10:36:46] 2025-10-12 14:36:31,385 | INFO     | .. there are 2 such processes running
[2025-10-12 10:36:46] 2025-10-12 14:36:31,386 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:36:46] 2025-10-12 14:36:31,386 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:36:46] 2025-10-12 14:36:31,386 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:36:46] 2025-10-12 14:36:40,660 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:36:46] 2025-10-12 14:36:41,341 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140521451530048)>', '<ExcThread(monitor, started 140521162913536)>']
[2025-10-12 10:36:46] 2025-10-12 14:36:41,431 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:36:46] 2025-10-12 14:36:41,432 | INFO     | [monitor] control thread has ended
[2025-10-12 10:36:46] 2025-10-12 14:36:46,366 | INFO     | all workflow threads have been joined
[2025-10-12 10:36:46] 2025-10-12 14:36:46,367 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:36:46] 2025-10-12 14:36:46,367 | INFO     | traces error code: 0
[2025-10-12 10:36:46] 2025-10-12 14:36:46,368 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:36:46] 2025-10-12 14:36:46,470 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:36:46] 2025-10-12 14:36:46,474 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:36:46] 2025-10-12 14:36:46,477 [wrapper] pilotpid: 9921
[2025-10-12 10:36:46] 2025-10-12 14:36:46,481 [wrapper] Pilot exit status: 0
[2025-10-12 10:36:46] 2025-10-12 14:36:46,494 [wrapper] pandaids: 6839636997
[2025-10-12 10:36:46] 2025-10-12 14:36:46,540 [wrapper] cleanup supervisor_pilot 26607 9922
[2025-10-12 10:36:46] 2025-10-12 14:36:46,544 [wrapper] Test setup, not cleaning
[2025-10-12 10:36:46] 2025-10-12 14:36:46,548 [wrapper] apfmon messages muted
[2025-10-12 10:36:46] 2025-10-12 14:36:46,552 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:36:46] 2025-10-12 14:36:46,555 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:36:46]  *** Error codes and diagnostics ***
[2025-10-12 10:36:46]     "exeErrorCode": 0,
[2025-10-12 10:36:46]     "exeErrorDiag": "",
[2025-10-12 10:36:46]     "pilotErrorCode": 0,
[2025-10-12 10:36:46]     "pilotErrorDiag": "",
[2025-10-12 10:36:46]  *** Listing of results directory ***
[2025-10-12 10:36:46] total 418908
[2025-10-12 10:36:46] -rwx------ 1 boincer umatlas     36292 Oct 12 02:54 runpilot2-wrapper.sh
[2025-10-12 10:36:46] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 02:54 queuedata.json
[2025-10-12 10:36:46] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 02:54 pilot3.tar.gz
[2025-10-12 10:36:46] -rw-r--r-- 1 boincer umatlas       100 Oct 12 09:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:36:46] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 09:26 run_atlas
[2025-10-12 10:36:46] -rw-r--r-- 1 boincer umatlas       105 Oct 12 09:26 job.xml
[2025-10-12 10:36:46] -rw-r--r-- 2 boincer umatlas 222074873 Oct 12 09:26 EVNT.46676267._002476.pool.root.1
[2025-10-12 10:36:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:26 start_atlas.sh
[2025-10-12 10:36:46] drwxrwx--x 2 boincer umatlas      4096 Oct 12 09:26 shared
[2025-10-12 10:36:46] -rw-r--r-- 2 boincer umatlas    569673 Oct 12 09:26 input.tar.gz
[2025-10-12 10:36:46] -rw-r--r-- 1 boincer umatlas         0 Oct 12 09:26 boinc_lockfile
[2025-10-12 10:36:46] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 09:26 pandaJob.out
[2025-10-12 10:36:46] -rw------- 1 boincer umatlas    975528 Oct 12 09:26 agis_schedconf.cvmfs.json
[2025-10-12 10:36:46] -rw------- 1 boincer umatlas   1560580 Oct 12 09:26 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:36:46] drwx------ 5 boincer umatlas      4096 Oct 12 09:26 pilot3
[2025-10-12 10:36:46] -rw-r--r-- 1 boincer umatlas      6135 Oct 12 10:30 init_data.xml
[2025-10-12 10:36:46] -rw-r--r-- 1 boincer umatlas       529 Oct 12 10:35 boinc_task_state.xml
[2025-10-12 10:36:46] -rw------- 1 boincer umatlas 201103167 Oct 12 10:35 HITS.46676269._073255.pool.root.1
[2025-10-12 10:36:46] -rw------- 1 boincer umatlas      1047 Oct 12 10:35 memory_monitor_summary.json
[2025-10-12 10:36:46] -rw------- 1 boincer umatlas    318637 Oct 12 10:35 log.46676269._073255.job.log.tgz.1
[2025-10-12 10:36:46] -rw------- 1 boincer umatlas      7842 Oct 12 10:35 heartbeat.json
[2025-10-12 10:36:46] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 10:36 boinc_mmap_file
[2025-10-12 10:36:46] -rw-r--r-- 1 boincer umatlas        27 Oct 12 10:36 wrapper_checkpoint.txt
[2025-10-12 10:36:46] -rw------- 1 boincer umatlas        95 Oct 12 10:36 pilot_heartbeat.json
[2025-10-12 10:36:46] -rw------- 1 boincer umatlas      4892 Oct 12 10:36 pilotlog.txt
[2025-10-12 10:36:46] -rw------- 1 boincer umatlas    621601 Oct 12 10:36 log.46676269._073255.job.log.1
[2025-10-12 10:36:46] -rw------- 1 boincer umatlas       357 Oct 12 10:36 output.list
[2025-10-12 10:36:46] -rw-r--r-- 1 boincer umatlas       620 Oct 12 10:36 runtime_log
[2025-10-12 10:36:46] -rw------- 1 boincer umatlas    962560 Oct 12 10:36 result.tar.gz
[2025-10-12 10:36:46] -rw------- 1 boincer umatlas       657 Oct 12 10:36 WPfKDmm94R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWxiNDmAN3dmn.diag
[2025-10-12 10:36:46] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 10:36 runtime_log.err
[2025-10-12 10:36:46] -rw-r--r-- 1 boincer umatlas     21882 Oct 12 10:36 stderr.txt
[2025-10-12 10:36:46] HITS file was successfully produced:
[2025-10-12 10:36:46] -rw------- 1 boincer umatlas 201103167 Oct 12 10:35 shared/HITS.pool.root.1
[2025-10-12 10:36:46]  *** Contents of shared directory: ***
[2025-10-12 10:36:46] total 414784
[2025-10-12 10:36:46] -rw-r--r-- 2 boincer umatlas 222074873 Oct 12 09:26 ATLAS.root_0
[2025-10-12 10:36:46] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:26 start_atlas.sh
[2025-10-12 10:36:46] -rw-r--r-- 2 boincer umatlas    569673 Oct 12 09:26 input.tar.gz
[2025-10-12 10:36:46] -rw------- 1 boincer umatlas 201103167 Oct 12 10:35 HITS.pool.root.1
[2025-10-12 10:36:46] -rw------- 1 boincer umatlas    962560 Oct 12 10:36 result.tar.gz
10:36:48 (6241): run_atlas exited; CPU time 30277.483043
10:36:48 (6241): called boinc_finish(0)

</stderr_txt>
]]>

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