Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:13:31 (594152): wrapper (7.7.26015): starting
05:13:31 (594152): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 05:13:31] Arguments: --nthreads 4
[2025-10-13 05:13:31] Threads: 4
[2025-10-13 05:13:31] Checking for CVMFS
[2025-10-13 05:13:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:13:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:13:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:13:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:13:32] 2.13.2.0 1261730 2809 51212 151629 1 188 3798126 6144001 2625 130560 0 7788527 99.997 88634 100 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2025-10-13 05:13:32] CVMFS is ok
[2025-10-13 05:13:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:13:32] Checking for apptainer binary...
[2025-10-13 05:13:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:13:32] Running /usr/bin/apptainer --version
[2025-10-13 05:13:32] apptainer version 1.4.0
[2025-10-13 05:13:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:13:33] Zen
[2025-10-13 05:13:33] apptainer works
[2025-10-13 05:13:33] Set ATHENA_PROC_NUMBER=4
[2025-10-13 05:13:33] Set ATHENA_CORE_NUMBER=4
[2025-10-13 05:13:33] Starting ATLAS job with PandaID=6839591169
[2025-10-13 05:13:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/michael/Boinc/BOINC/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:45:56]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:45:56]  lfn=log.46676269._072601.job.log.tgz.1
[2025-10-13 06:45:56]  mtime=0
[2025-10-13 06:45:56]  protocol_id=None
[2025-10-13 06:45:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 06:45:56]  replicas=None
[2025-10-13 06:45:56]  scope=mc23_13p6TeV
[2025-10-13 06:45:56]  status=None
[2025-10-13 06:45:56]  status_code=0
[2025-10-13 06:45:56]  storage_token=
[2025-10-13 06:45:56]  surl=/home/michael/Boinc/BOINC/slots/4/PanDA_Pilot-6839591169/log.46676269._072601.job.log.tgz.1
[2025-10-13 06:45:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6e/d1/log.46676269._072601.job.log.tgz.1
[2025-10-13 06:45:56]  workdir=None
[2025-10-13 06:45:56] ]
[2025-10-13 06:45:56] 2025-10-12 19:45:14,132 | INFO     | transferring file log.46676269._072601.job.log.tgz.1 from /home/michael/Boinc/BOINC/slots/4/PanDA_Pilot-6839591169/log.46676269._072601.job.log.tgz.1 to /home/mich
[2025-10-13 06:45:56] 2025-10-12 19:45:14,132 | INFO     | executing command: /usr/bin/env mv /home/michael/Boinc/BOINC/slots/4/PanDA_Pilot-6839591169/log.46676269._072601.job.log.tgz.1 /home/michael/Boinc/BOINC/slots/4/lo
[2025-10-13 06:45:56] 2025-10-12 19:45:14,177 | INFO     | adding to output.list: log.46676269._072601.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6e/d1/log.46676269._072601.job.log.tg
[2025-10-13 06:45:56] 2025-10-12 19:45:14,177 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 06:45:56] 2025-10-12 19:45:14,177 | INFO     | summary of transferred files:
[2025-10-13 06:45:56] 2025-10-12 19:45:14,177 | INFO     |  -- lfn=log.46676269._072601.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 06:45:56] 2025-10-12 19:45:14,178 | INFO     | stage-out finished correctly
[2025-10-13 06:45:56] 2025-10-12 19:45:14,223 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 06:45:56] 2025-10-12 19:45:15,760 | INFO     | job 6839591169 has state=finished
[2025-10-13 06:45:56] 2025-10-12 19:45:15,760 | INFO     | preparing for final server update for job 6839591169 in state='finished'
[2025-10-13 06:45:56] 2025-10-12 19:45:15,760 | INFO     | this job has now completed (state=finished)
[2025-10-13 06:45:56] 2025-10-12 19:45:15,760 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 06:45:56] 2025-10-12 19:45:15,760 | INFO     | log transfer has been attempted: DONE
[2025-10-13 06:45:56] 2025-10-12 19:45:15,760 | INFO     | job 6839591169 has finished - writing final server update
[2025-10-13 06:45:56] 2025-10-12 19:45:15,761 | INFO     | total number of processed events: 400 (read)
[2025-10-13 06:45:56] 2025-10-12 19:45:15,763 | INFO     | executing command: lscpu
[2025-10-13 06:45:56] 2025-10-12 19:45:15,783 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 06:45:56] 2025-10-12 19:45:16,093 | INFO     | time since job start (5494s) is within the limit (172800.0s)
[2025-10-13 06:45:56] 2025-10-12 19:45:16,642 | WARNING  | process 604987 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 06:45:56] 2025-10-12 19:45:16,643 | INFO     | using path: /home/michael/Boinc/BOINC/slots/4/PanDA_Pilot-6839591169/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:45:56] 2025-10-12 19:45:16,779 | INFO     | number of running child processes to parent process 604987: 1
[2025-10-13 06:45:56] 2025-10-12 19:45:16,779 | INFO     | maximum number of monitored processes: 6
[2025-10-13 06:45:56] 2025-10-12 19:45:18,098 | INFO     | time since job start (5496s) is within the limit (172800.0s)
[2025-10-13 06:45:56] 2025-10-12 19:45:18,119 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 06:45:56] 2025-10-12 19:45:18,122 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 4402.064500000001
[2025-10-13 06:45:56] 2025-10-12 19:45:18,124 | INFO     | using path: /home/michael/Boinc/BOINC/slots/4/PanDA_Pilot-6839591169/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:45:56] 2025-10-12 19:45:18,125 | INFO     | extracted standard info from prmon json
[2025-10-13 06:45:56] 2025-10-12 19:45:18,125 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:45:56] 2025-10-12 19:45:18,125 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:45:56] 2025-10-12 19:45:18,125 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:45:56] 2025-10-12 19:45:18,125 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:45:56] 2025-10-12 19:45:18,126 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:45:56] 2025-10-12 19:45:18,126 | INFO     | sum of square deviations: 177275882.0
[2025-10-13 06:45:56] 2025-10-12 19:45:18,126 | INFO     | sum of deviations: 548072617.0
[2025-10-13 06:45:56] 2025-10-12 19:45:18,126 | INFO     | mean x: 1760295647.0
[2025-10-13 06:45:56] 2025-10-12 19:45:18,126 | INFO     | mean y: 2330645.674698795
[2025-10-13 06:45:56] 2025-10-12 19:45:18,126 | INFO     | -- intersect: -5439863921.688944
[2025-10-13 06:45:56] 2025-10-12 19:45:18,126 | INFO     | intersect: -5439863921.688944
[2025-10-13 06:45:56] 2025-10-12 19:45:18,126 | INFO     | chi2: 0.0007347867230814339
[2025-10-13 06:45:56] 2025-10-12 19:45:18,126 | INFO     | -- intersect: -5439863921.688944
[2025-10-13 06:45:56] 2025-10-12 19:45:18,126 | INFO     | current memory leak: 3.09 B/s (using 83 data points, chi2=0.00)
[2025-10-13 06:45:56] 2025-10-12 19:45:18,126 | INFO     | could have reported an average CPU frequency of 4324 MHz (7 samples)
[2025-10-13 06:45:56] 2025-10-12 19:45:18,126 | INFO     | ..............................
[2025-10-13 06:45:56] 2025-10-12 19:45:18,127 | INFO     | . Timing measurements:
[2025-10-13 06:45:56] 2025-10-12 19:45:18,127 | INFO     | . get job = 0 s
[2025-10-13 06:45:56] 2025-10-12 19:45:18,127 | INFO     | . initial setup = 5 s
[2025-10-13 06:45:56] 2025-10-12 19:45:18,127 | INFO     | . payload setup = 2 s
[2025-10-13 06:45:56] 2025-10-12 19:45:18,127 | INFO     | . stage-in = 0 s
[2025-10-13 06:45:56] 2025-10-12 19:45:18,127 | INFO     | . payload execution = 5470 s
[2025-10-13 06:45:56] 2025-10-12 19:45:18,127 | INFO     | . stage-out = 0 s
[2025-10-13 06:45:56] 2025-10-12 19:45:18,127 | INFO     | . log creation = 0 s
[2025-10-13 06:45:56] 2025-10-12 19:45:18,127 | INFO     | ..............................
[2025-10-13 06:45:56] 2025-10-12 19:45:18,159 | INFO     | 
[2025-10-13 06:45:56] 2025-10-12 19:45:18,159 | INFO     | job summary report
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | --------------------------------------------------
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | PanDA job id: 6839591169
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | task id: 46676269
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | errors: (none)
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | pilot state: finished 
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | transexitcode: 0
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | exeerrorcode: 0
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | exeerrordiag: 
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | exitcode: 0
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | exitmsg: OK
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | cpuconsumptiontime: 20817 s
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | nevents: 400
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | neventsw: 0
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | pid: 604987
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | pgrp: 604987
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | corecount: 4
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | event service: False
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | sizes: {0: 2348868, 2: 2349130, 11: 2349158, 5477: 2375849, 5479: 2384925, 5483: 2385063}
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | --------------------------------------------------
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | 
[2025-10-13 06:45:56] 2025-10-12 19:45:18,160 | INFO     | executing command: ls -lF /home/michael/Boinc/BOINC/slots/4
[2025-10-13 06:45:56] 2025-10-12 19:45:18,174 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:45:56] 2025-10-12 19:45:18,174 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:45:56] 2025-10-12 19:45:18,174 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:45:56] 2025-10-12 19:45:18,174 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:45:56] 2025-10-12 19:45:18,174 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:45:56] 2025-10-12 19:45:18,174 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:45:56] 2025-10-12 19:45:18,174 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:45:56] 2025-10-12 19:45:18,174 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:45:56] 2025-10-12 19:45:18,174 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:45:56] 2025-10-12 19:45:18,174 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:45:56] 2025-10-12 19:45:18,174 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:45:56] 2025-10-12 19:45:18,174 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:45:56] 2025-10-12 19:45:18,174 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:45:56] 2025-10-12 19:45:18,174 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:45:56] 2025-10-12 19:45:18,174 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:45:56] 2025-10-12 19:45:18,174 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:45:56] 2025-10-12 19:45:18,174 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:45:56] 2025-10-12 19:45:18,174 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:45:56] 2025-10-12 19:45:18,174 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:45:56] 2025-10-12 19:45:18,174 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:45:56] 2025-10-12 19:45:18,175 | INFO     | job 6839591169 has completed (purged errors)
[2025-10-13 06:45:56] 2025-10-12 19:45:18,175 | INFO     | overall cleanup function is called
[2025-10-13 06:45:56] 2025-10-12 19:45:19,181 | INFO     | --- collectZombieJob: --- 10, [604987]
[2025-10-13 06:45:56] 2025-10-12 19:45:19,184 | INFO     | zombie collector waiting for pid 604987
[2025-10-13 06:45:56] 2025-10-12 19:45:19,184 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:45:56] 2025-10-12 19:45:19,184 | INFO     | collected zombie processes
[2025-10-13 06:45:56] 2025-10-12 19:45:19,184 | INFO     | will attempt to kill all subprocesses of pid=604987
[2025-10-13 06:45:56] 2025-10-12 19:45:19,312 | INFO     | process IDs to be killed: [604987] (in reverse order)
[2025-10-13 06:45:56] 2025-10-12 19:45:19,358 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:45:56] 2025-10-12 19:45:19,359 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:45:56] 2025-10-12 19:45:19,362 | INFO     | did not find any defunct processes belonging to 604987
[2025-10-13 06:45:56] 2025-10-12 19:45:19,364 | INFO     | did not find any defunct processes belonging to 604987
[2025-10-13 06:45:56] 2025-10-12 19:45:19,364 | INFO     | ready for new job
[2025-10-13 06:45:56] 2025-10-12 19:45:19,364 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:45:56] 2025-10-12 19:45:19,365 | INFO     | ***************************************
[2025-10-13 06:45:56] 2025-10-12 19:45:19,365 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:45:56] 2025-10-12 19:45:19,365 | INFO     | ***************************************
[2025-10-13 06:45:56] 2025-10-12 19:45:19,365 | INFO     | 
[2025-10-13 06:45:56] 2025-10-12 19:45:19,366 | INFO     | architecture information:
[2025-10-13 06:45:56] 2025-10-12 19:45:19,366 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:45:56] 2025-10-12 19:45:19,378 | INFO     | cat /etc/os-release:
[2025-10-13 06:45:56] NAME="CentOS Linux"
[2025-10-13 06:45:56] VERSION="7 (Core)"
[2025-10-13 06:45:56] ID="centos"
[2025-10-13 06:45:56] ID_LIKE="rhel fedora"
[2025-10-13 06:45:56] VERSION_ID="7"
[2025-10-13 06:45:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:45:56] ANSI_COLOR="0;31"
[2025-10-13 06:45:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:45:56] HOME_URL="https://www.centos.org/"
[2025-10-13 06:45:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:45:56] 
[2025-10-13 06:45:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:45:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:45:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:45:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:45:56] 
[2025-10-13 06:45:56] 2025-10-12 19:45:19,379 | INFO     | ***************************************
[2025-10-13 06:45:56] 2025-10-12 19:45:19,881 | INFO     | executing command: df -mP /home/michael/Boinc/BOINC/slots/4
[2025-10-13 06:45:56] 2025-10-12 19:45:19,897 | INFO     | sufficient remaining disk space (207114731520 B)
[2025-10-13 06:45:56] 2025-10-12 19:45:19,897 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:45:56] 2025-10-12 19:45:19,898 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:45:56] 2025-10-12 19:45:19,898 | INFO     | update_server=False
[2025-10-13 06:45:56] 2025-10-12 19:45:19,898 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:45:56] 2025-10-12 19:45:19,898 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:45:56] 2025-10-12 19:45:19,898 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:45:56] 2025-10-12 19:45:19,898 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 06:45:56] 2025-10-12 19:45:19,898 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:45:56] 2025-10-12 19:45:19,898 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:45:56] 2025-10-12 19:45:19,898 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:45:56] 2025-10-12 19:45:20,264 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:45:56] 2025-10-12 19:45:20,286 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:45:56] 2025-10-12 19:45:20,287 | INFO     | aborting loop
[2025-10-13 06:45:56] 2025-10-12 19:45:20,465 | INFO     | all data control threads have been joined
[2025-10-13 06:45:56] 2025-10-12 19:45:20,869 | INFO     | all payload control threads have been joined
[2025-10-13 06:45:56] 2025-10-12 19:45:20,902 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:45:56] 2025-10-12 19:45:20,903 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:45:56] 2025-10-12 19:45:20,988 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:45:56] 2025-10-12 19:45:21,135 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:45:56] 2025-10-12 19:45:21,292 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:45:56] 2025-10-12 19:45:21,338 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:45:56] 2025-10-12 19:45:21,469 | INFO     | [data] control thread has finished
[2025-10-13 06:45:56] 2025-10-12 19:45:21,601 | INFO     | all job control threads have been joined
[2025-10-13 06:45:56] 2025-10-12 19:45:21,861 | INFO     | [job] validate thread has finished
[2025-10-13 06:45:56] 2025-10-12 19:45:21,874 | INFO     | [payload] control thread has finished
[2025-10-13 06:45:56] 2025-10-12 19:45:21,875 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:45:56] 2025-10-12 19:45:21,903 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:45:56] 2025-10-12 19:45:21,934 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:45:56] 2025-10-12 19:45:22,049 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:45:56] 2025-10-12 19:45:22,606 | INFO     | [job] control thread has finished
[2025-10-13 06:45:56] 2025-10-12 19:45:24,269 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:45:56] 2025-10-12 19:45:30,624 | INFO     | job.realtimelogging is not enabled
[2025-10-13 06:45:56] 2025-10-12 19:45:31,629 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:45:56] 2025-10-12 19:45:51,010 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:45:56] 2025-10-12 19:45:51,641 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130719254652736)>', '<ExcThread(monitor, started 130718906693376)>']
[2025-10-13 06:45:56] 2025-10-12 19:45:52,058 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:45:56] 2025-10-12 19:45:52,059 | INFO     | [monitor] control thread has ended
[2025-10-13 06:45:56] 2025-10-12 19:45:56,667 | INFO     | all workflow threads have been joined
[2025-10-13 06:45:56] 2025-10-12 19:45:56,667 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:45:56] 2025-10-12 19:45:56,667 | INFO     | traces error code: 0
[2025-10-13 06:45:56] 2025-10-12 19:45:56,667 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:45:56] 2025-10-12 19:45:56,730 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:45:56] 2025-10-12 19:45:56,732 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:45:56] 2025-10-12 19:45:56,734 [wrapper] pilotpid: 597957
[2025-10-13 06:45:56] 2025-10-12 19:45:56,735 [wrapper] Pilot exit status: 0
[2025-10-13 06:45:56] 2025-10-12 19:45:56,742 [wrapper] pandaids: 6839591169
[2025-10-13 06:45:56] 2025-10-12 19:45:56,776 [wrapper] cleanup supervisor_pilot  668752 597958
[2025-10-13 06:45:56] 2025-10-12 19:45:56,779 [wrapper] Test setup, not cleaning
[2025-10-13 06:45:56] 2025-10-12 19:45:56,781 [wrapper] apfmon messages muted
[2025-10-13 06:45:56] 2025-10-12 19:45:56,783 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:45:56] 2025-10-12 19:45:56,785 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:45:56]  *** Error codes and diagnostics ***
[2025-10-13 06:45:56]     "exeErrorCode": 0,
[2025-10-13 06:45:56]     "exeErrorDiag": "",
[2025-10-13 06:45:56]     "pilotErrorCode": 0,
[2025-10-13 06:45:56]     "pilotErrorDiag": "",
[2025-10-13 06:45:56]  *** Listing of results directory ***
[2025-10-13 06:45:56] total 410636
[2025-10-13 06:45:56] -rw-r--r-- 1 michael michael    557409 Oct 12 17:14 pilot3.tar.gz
[2025-10-13 06:45:56] -rw-r--r-- 1 michael michael      5112 Oct 12 17:28 queuedata.json
[2025-10-13 06:45:56] -rwx------ 1 michael michael     36292 Oct 12 17:31 runpilot2-wrapper.sh
[2025-10-13 06:45:56] -rw-rw-r-- 1 michael michael       100 Oct 13 05:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:45:56] -rwxr-xr-x 1 michael michael      7986 Oct 13 05:13 run_atlas
[2025-10-13 06:45:56] -rw-rw-r-- 1 michael michael       105 Oct 13 05:13 job.xml
[2025-10-13 06:45:56] -rw-r--r-- 2 michael michael 224166704 Oct 13 05:13 EVNT.46676267._004507.pool.root.1
[2025-10-13 06:45:56] -rw-rw-r-- 1 michael michael      9816 Oct 13 05:13 init_data.xml
[2025-10-13 06:45:56] drwxrwx--x 2 michael michael      4096 Oct 13 05:13 shared
[2025-10-13 06:45:56] -rw-r--r-- 2 michael michael    569681 Oct 13 05:13 input.tar.gz
[2025-10-13 06:45:56] -rw-r--r-- 2 michael michael     15120 Oct 13 05:13 start_atlas.sh
[2025-10-13 06:45:56] -rw-rw-r-- 1 michael michael         0 Oct 13 05:13 boinc_lockfile
[2025-10-13 06:45:56] -rw-rw-r-- 1 michael michael      2550 Oct 13 05:13 pandaJob.out
[2025-10-13 06:45:56] -rw------- 1 michael michael    975528 Oct 13 05:13 agis_schedconf.cvmfs.json
[2025-10-13 06:45:56] -rw------- 1 michael michael   1560580 Oct 13 05:13 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:45:56] drwx------ 5 michael michael      4096 Oct 13 05:13 pilot3
[2025-10-13 06:45:56] -rw------- 1 michael michael        95 Oct 13 06:44 pilot_heartbeat.json
[2025-10-13 06:45:56] -rw------- 1 michael michael 190217854 Oct 13 06:44 HITS.46676269._072601.pool.root.1
[2025-10-13 06:45:56] -rw-rw-r-- 1 michael michael       529 Oct 13 06:45 boinc_task_state.xml
[2025-10-13 06:45:56] -rw------- 1 michael michael      1022 Oct 13 06:45 memory_monitor_summary.json
[2025-10-13 06:45:56] -rw------- 1 michael michael    273270 Oct 13 06:45 log.46676269._072601.job.log.tgz.1
[2025-10-13 06:45:56] -rw------- 1 michael michael      7722 Oct 13 06:45 heartbeat.json
[2025-10-13 06:45:56] -rw-rw-r-- 1 michael michael      8192 Oct 13 06:45 boinc_mmap_file
[2025-10-13 06:45:56] -rw-rw-r-- 1 michael michael        27 Oct 13 06:45 wrapper_checkpoint.txt
[2025-10-13 06:45:56] -rw------- 1 michael michael      4636 Oct 13 06:45 pilotlog.txt
[2025-10-13 06:45:56] -rw------- 1 michael michael    823406 Oct 13 06:45 log.46676269._072601.job.log.1
[2025-10-13 06:45:56] -rw------- 1 michael michael       357 Oct 13 06:45 output.list
[2025-10-13 06:45:56] -rw-rw-r-- 1 michael michael       620 Oct 13 06:45 runtime_log
[2025-10-13 06:45:56] -rw------- 1 michael michael   1116160 Oct 13 06:45 result.tar.gz
[2025-10-13 06:45:56] -rw------- 1 michael michael       641 Oct 13 06:45 xk5LDmwm4R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOriNDmgRgkKo.diag
[2025-10-13 06:45:56] -rw-rw-r-- 1 michael michael      8797 Oct 13 06:45 runtime_log.err
[2025-10-13 06:45:56] -rw-rw-r-- 1 michael michael     21271 Oct 13 06:45 stderr.txt
[2025-10-13 06:45:56] HITS file was successfully produced:
[2025-10-13 06:45:56] -rw------- 1 michael michael 190217854 Oct 13 06:44 shared/HITS.pool.root.1
[2025-10-13 06:45:56]  *** Contents of shared directory: ***
[2025-10-13 06:45:56] total 406352
[2025-10-13 06:45:56] -rw-r--r-- 2 michael michael 224166704 Oct 13 05:13 ATLAS.root_0
[2025-10-13 06:45:56] -rw-r--r-- 2 michael michael    569681 Oct 13 05:13 input.tar.gz
[2025-10-13 06:45:56] -rw-r--r-- 2 michael michael     15120 Oct 13 05:13 start_atlas.sh
[2025-10-13 06:45:56] -rw------- 1 michael michael 190217854 Oct 13 06:44 HITS.pool.root.1
[2025-10-13 06:45:56] -rw------- 1 michael michael   1116160 Oct 13 06:45 result.tar.gz
06:45:58 (594152): run_atlas exited; CPU time 20864.517378
06:45:58 (594152): called boinc_finish(0)

</stderr_txt>
]]>

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