Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:54:48 (3357199): wrapper (7.7.26015): starting
10:54:48 (3357199): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 10:54:48] Arguments: --nthreads 8
[2025-10-12 10:54:48] Threads: 8
[2025-10-12 10:54:48] Checking for CVMFS
[2025-10-12 10:54:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 10:54:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 10:54:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 10:54:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 10:54:49] 2.13.1.0 7481 77485 110784 151623 0 324 33985537 40960000 29616 16776704 0 446974003 99.779 253541496 45794 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 10:54:49] CVMFS is ok
[2025-10-12 10:54:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 10:54:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 10:54:49] Further information can be found at the LHC@home message board.
[2025-10-12 10:54:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 10:54:49] Checking for apptainer binary...
[2025-10-12 10:54:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 10:54:49] Running /usr/bin/apptainer --version
[2025-10-12 10:54:49] apptainer version 1.4.3-1.el9
[2025-10-12 10:54:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 10:54:49] c-208-38.aglt2.org
[2025-10-12 10:54:49] apptainer works
[2025-10-12 10:54:49] Set ATHENA_PROC_NUMBER=8
[2025-10-12 10:54:49] Set ATHENA_CORE_NUMBER=8
[2025-10-12 10:54:49] Starting ATLAS job with PandaID=6839386675
[2025-10-12 10:54:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:15:37]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:15:37] 2025-10-12 16:14:49,851 | INFO     | transferring file log.46676269._070971.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839386675/log.46676269._070971.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 12:15:37] 2025-10-12 16:14:49,851 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839386675/log.46676269._070971.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._070971.job
[2025-10-12 12:15:37] 2025-10-12 16:14:49,878 | INFO     | adding to output.list: log.46676269._070971.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a1/97/log.46676269._070971.job.log.tg
[2025-10-12 12:15:37] 2025-10-12 16:14:49,879 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 12:15:37] 2025-10-12 16:14:49,879 | INFO     | summary of transferred files:
[2025-10-12 12:15:37] 2025-10-12 16:14:49,879 | INFO     |  -- lfn=log.46676269._070971.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 12:15:37] 2025-10-12 16:14:49,879 | INFO     | stage-out finished correctly
[2025-10-12 12:15:37] 2025-10-12 16:14:51,417 | INFO     | time since job start (4785s) is within the limit (172800.0s)
[2025-10-12 12:15:37] 2025-10-12 16:14:52,047 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 12:15:37] 2025-10-12 16:14:53,423 | INFO     | time since job start (4787s) is within the limit (172800.0s)
[2025-10-12 12:15:37] 2025-10-12 16:14:53,863 | WARNING  | process 3367670 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 12:15:37] 2025-10-12 16:14:53,863 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839386675/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:15:37] 2025-10-12 16:14:54,157 | INFO     | job 6839386675 has state=finished
[2025-10-12 12:15:37] 2025-10-12 16:14:54,159 | INFO     | preparing for final server update for job 6839386675 in state='finished'
[2025-10-12 12:15:37] 2025-10-12 16:14:54,160 | INFO     | this job has now completed (state=finished)
[2025-10-12 12:15:37] 2025-10-12 16:14:54,160 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 12:15:37] 2025-10-12 16:14:54,161 | INFO     | log transfer has been attempted: DONE
[2025-10-12 12:15:37] 2025-10-12 16:14:54,161 | INFO     | job 6839386675 has finished - writing final server update
[2025-10-12 12:15:37] 2025-10-12 16:14:54,161 | INFO     | total number of processed events: 400 (read)
[2025-10-12 12:15:37] 2025-10-12 16:14:54,162 | INFO     | executing command: lscpu
[2025-10-12 12:15:37] 2025-10-12 16:14:54,229 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 12:15:37] 2025-10-12 16:14:54,420 | INFO     | number of running child processes to parent process 3367670: 1
[2025-10-12 12:15:37] 2025-10-12 16:14:54,420 | INFO     | maximum number of monitored processes: 6
[2025-10-12 12:15:37] 2025-10-12 16:14:55,430 | INFO     | time since job start (4789s) is within the limit (172800.0s)
[2025-10-12 12:15:37] 2025-10-12 16:14:56,925 | INFO     | monitor loop #325: job 0:6839386675 is in state 'finished'
[2025-10-12 12:15:37] 2025-10-12 16:14:56,926 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:15:37] 2025-10-12 16:14:57,436 | INFO     | time since job start (4791s) is within the limit (172800.0s)
[2025-10-12 12:15:37] 2025-10-12 16:14:59,430 | INFO     | monitor loop #326: job 0:6839386675 is in state 'finished'
[2025-10-12 12:15:37] 2025-10-12 16:14:59,431 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:15:37] 2025-10-12 16:14:59,445 | INFO     | time since job start (4793s) is within the limit (172800.0s)
[2025-10-12 12:15:37] 2025-10-12 16:15:01,450 | INFO     | time since job start (4795s) is within the limit (172800.0s)
[2025-10-12 12:15:37] 2025-10-12 16:15:01,941 | INFO     | monitor loop #327: job 0:6839386675 is in state 'finished'
[2025-10-12 12:15:37] 2025-10-12 16:15:01,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 12:15:37] 2025-10-12 16:15:03,457 | INFO     | time since job start (4797s) is within the limit (172800.0s)
[2025-10-12 12:15:37] 2025-10-12 16:15:03,934 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-12 12:15:37] 2025-10-12 16:15:03,939 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3734.5918046874986
[2025-10-12 12:15:37] 2025-10-12 16:15:03,953 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839386675/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 12:15:37] 2025-10-12 16:15:03,953 | INFO     | extracted standard info from prmon json
[2025-10-12 12:15:37] 2025-10-12 16:15:03,953 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:15:37] 2025-10-12 16:15:03,953 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:15:37] 2025-10-12 16:15:03,953 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:15:37] 2025-10-12 16:15:03,954 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:15:37] 2025-10-12 16:15:03,955 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:15:37] 2025-10-12 16:15:03,955 | INFO     | sum of square deviations: 110960220.0
[2025-10-12 12:15:37] 2025-10-12 16:15:03,955 | INFO     | sum of deviations: 667957198.0000006
[2025-10-12 12:15:37] 2025-10-12 16:15:03,955 | INFO     | mean x: 1760283382.0
[2025-10-12 12:15:37] 2025-10-12 16:15:03,955 | INFO     | mean y: 2504530.0140845072
[2025-10-12 12:15:37] 2025-10-12 16:15:03,955 | INFO     | -- intersect: -10594031377.41909
[2025-10-12 12:15:37] 2025-10-12 16:15:03,956 | INFO     | intersect: -10594031377.41909
[2025-10-12 12:15:37] 2025-10-12 16:15:03,956 | INFO     | chi2: 0.27781111206798087
[2025-10-12 12:15:37] 2025-10-12 16:15:03,956 | INFO     | -- intersect: -10594031377.41909
[2025-10-12 12:15:37] 2025-10-12 16:15:03,956 | INFO     | current memory leak: 6.02 B/s (using 71 data points, chi2=0.28)
[2025-10-12 12:15:37] 2025-10-12 16:15:03,956 | INFO     | could have reported an average CPU frequency of 3749 MHz (6 samples)
[2025-10-12 12:15:37] 2025-10-12 16:15:03,956 | INFO     | ..............................
[2025-10-12 12:15:37] 2025-10-12 16:15:03,956 | INFO     | . Timing measurements:
[2025-10-12 12:15:37] 2025-10-12 16:15:03,956 | INFO     | . get job = 0 s
[2025-10-12 12:15:37] 2025-10-12 16:15:03,956 | INFO     | . initial setup = 3 s
[2025-10-12 12:15:37] 2025-10-12 16:15:03,956 | INFO     | . payload setup = 9 s
[2025-10-12 12:15:37] 2025-10-12 16:15:03,956 | INFO     | . stage-in = 0 s
[2025-10-12 12:15:37] 2025-10-12 16:15:03,956 | INFO     | . payload execution = 4749 s
[2025-10-12 12:15:37] 2025-10-12 16:15:03,956 | INFO     | . stage-out = 0 s
[2025-10-12 12:15:37] 2025-10-12 16:15:03,956 | INFO     | . log creation = 0 s
[2025-10-12 12:15:37] 2025-10-12 16:15:03,956 | INFO     | ..............................
[2025-10-12 12:15:37] 2025-10-12 16:15:04,054 | INFO     | 
[2025-10-12 12:15:37] 2025-10-12 16:15:04,054 | INFO     | job summary report
[2025-10-12 12:15:37] 2025-10-12 16:15:04,054 | INFO     | --------------------------------------------------
[2025-10-12 12:15:37] 2025-10-12 16:15:04,054 | INFO     | PanDA job id: 6839386675
[2025-10-12 12:15:37] 2025-10-12 16:15:04,054 | INFO     | task id: 46676269
[2025-10-12 12:15:37] 2025-10-12 16:15:04,054 | INFO     | errors: (none)
[2025-10-12 12:15:37] 2025-10-12 16:15:04,054 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:15:37] 2025-10-12 16:15:04,054 | INFO     | pilot state: finished 
[2025-10-12 12:15:37] 2025-10-12 16:15:04,054 | INFO     | transexitcode: 0
[2025-10-12 12:15:37] 2025-10-12 16:15:04,054 | INFO     | exeerrorcode: 0
[2025-10-12 12:15:37] 2025-10-12 16:15:04,054 | INFO     | exeerrordiag: 
[2025-10-12 12:15:37] 2025-10-12 16:15:04,054 | INFO     | exitcode: 0
[2025-10-12 12:15:37] 2025-10-12 16:15:04,054 | INFO     | exitmsg: OK
[2025-10-12 12:15:37] 2025-10-12 16:15:04,054 | INFO     | cpuconsumptiontime: 25564 s
[2025-10-12 12:15:37] 2025-10-12 16:15:04,055 | INFO     | nevents: 400
[2025-10-12 12:15:37] 2025-10-12 16:15:04,055 | INFO     | neventsw: 0
[2025-10-12 12:15:37] 2025-10-12 16:15:04,055 | INFO     | pid: 3367670
[2025-10-12 12:15:37] 2025-10-12 16:15:04,055 | INFO     | pgrp: 3367670
[2025-10-12 12:15:37] 2025-10-12 16:15:04,055 | INFO     | corecount: 8
[2025-10-12 12:15:37] 2025-10-12 16:15:04,055 | INFO     | event service: False
[2025-10-12 12:15:37] 2025-10-12 16:15:04,055 | INFO     | sizes: {0: 2348857, 8: 2349119, 11: 2349147, 4763: 2375450, 4765: 2384448, 4767: 2384504, 4779: 2384826}
[2025-10-12 12:15:37] 2025-10-12 16:15:04,055 | INFO     | --------------------------------------------------
[2025-10-12 12:15:37] 2025-10-12 16:15:04,055 | INFO     | 
[2025-10-12 12:15:37] 2025-10-12 16:15:04,055 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 12:15:37] 2025-10-12 16:15:04,103 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:15:37] 2025-10-12 16:15:04,103 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:15:37] 2025-10-12 16:15:04,103 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:15:37] 2025-10-12 16:15:04,103 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:15:37] 2025-10-12 16:15:04,103 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:15:37] 2025-10-12 16:15:04,103 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:15:37] 2025-10-12 16:15:04,103 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:15:37] 2025-10-12 16:15:04,103 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:15:37] 2025-10-12 16:15:04,103 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:15:37] 2025-10-12 16:15:04,103 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:15:37] 2025-10-12 16:15:04,104 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:15:37] 2025-10-12 16:15:04,104 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:15:37] 2025-10-12 16:15:04,104 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:15:37] 2025-10-12 16:15:04,104 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:15:37] 2025-10-12 16:15:04,104 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:15:37] 2025-10-12 16:15:04,104 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:15:37] 2025-10-12 16:15:04,104 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:15:37] 2025-10-12 16:15:04,104 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:15:37] 2025-10-12 16:15:04,104 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:15:37] 2025-10-12 16:15:04,104 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:15:37] 2025-10-12 16:15:04,104 | INFO     | job 6839386675 has completed (purged errors)
[2025-10-12 12:15:37] 2025-10-12 16:15:04,104 | INFO     | overall cleanup function is called
[2025-10-12 12:15:37] 2025-10-12 16:15:05,112 | INFO     | --- collectZombieJob: --- 10, [3367670]
[2025-10-12 12:15:37] 2025-10-12 16:15:05,112 | INFO     | zombie collector waiting for pid 3367670
[2025-10-12 12:15:37] 2025-10-12 16:15:05,112 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:15:37] 2025-10-12 16:15:05,113 | INFO     | collected zombie processes
[2025-10-12 12:15:37] 2025-10-12 16:15:05,113 | INFO     | will attempt to kill all subprocesses of pid=3367670
[2025-10-12 12:15:37] 2025-10-12 16:15:05,531 | INFO     | process IDs to be killed: [3367670] (in reverse order)
[2025-10-12 12:15:37] 2025-10-12 16:15:05,739 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:15:37] 2025-10-12 16:15:05,739 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:15:37] 2025-10-12 16:15:05,761 | INFO     | did not find any defunct processes belonging to 3367670
[2025-10-12 12:15:37] 2025-10-12 16:15:05,784 | INFO     | did not find any defunct processes belonging to 3367670
[2025-10-12 12:15:37] 2025-10-12 16:15:05,784 | INFO     | ready for new job
[2025-10-12 12:15:37] 2025-10-12 16:15:05,784 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:15:37] 2025-10-12 16:15:05,786 | INFO     | ***************************************
[2025-10-12 12:15:37] 2025-10-12 16:15:05,786 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:15:37] 2025-10-12 16:15:05,786 | INFO     | ***************************************
[2025-10-12 12:15:37] 2025-10-12 16:15:05,786 | INFO     | 
[2025-10-12 12:15:37] 2025-10-12 16:15:05,791 | INFO     | architecture information:
[2025-10-12 12:15:37] 2025-10-12 16:15:05,792 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:15:37] 2025-10-12 16:15:05,824 | INFO     | cat /etc/os-release:
[2025-10-12 12:15:37] NAME="CentOS Linux"
[2025-10-12 12:15:37] VERSION="7 (Core)"
[2025-10-12 12:15:37] ID="centos"
[2025-10-12 12:15:37] ID_LIKE="rhel fedora"
[2025-10-12 12:15:37] VERSION_ID="7"
[2025-10-12 12:15:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:15:37] ANSI_COLOR="0;31"
[2025-10-12 12:15:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:15:37] HOME_URL="https://www.centos.org/"
[2025-10-12 12:15:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:15:37] 
[2025-10-12 12:15:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:15:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:15:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:15:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:15:37] 
[2025-10-12 12:15:37] 2025-10-12 16:15:05,824 | INFO     | ***************************************
[2025-10-12 12:15:37] 2025-10-12 16:15:06,329 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 12:15:37] 2025-10-12 16:15:06,404 | INFO     | sufficient remaining disk space (170554032128 B)
[2025-10-12 12:15:37] 2025-10-12 16:15:06,405 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:15:37] 2025-10-12 16:15:06,405 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:15:37] 2025-10-12 16:15:06,405 | INFO     | update_server=False
[2025-10-12 12:15:37] 2025-10-12 16:15:06,405 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:15:37] 2025-10-12 16:15:06,406 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:15:37] 2025-10-12 16:15:06,407 | INFO     | aborting loop
[2025-10-12 12:15:37] 2025-10-12 16:15:06,406 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:15:37] 2025-10-12 16:15:06,884 | INFO     | all data control threads have been joined
[2025-10-12 12:15:37] 2025-10-12 16:15:07,177 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:15:37] 2025-10-12 16:15:07,311 | INFO     | all job control threads have been joined
[2025-10-12 12:15:37] 2025-10-12 16:15:07,355 | INFO     | all payload control threads have been joined
[2025-10-12 12:15:37] 2025-10-12 16:15:07,411 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:15:37] 2025-10-12 16:15:07,412 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:15:37] 2025-10-12 16:15:07,474 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:15:37] 2025-10-12 16:15:07,684 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:15:37] 2025-10-12 16:15:07,863 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:15:37] 2025-10-12 16:15:07,890 | INFO     | [data] control thread has finished
[2025-10-12 12:15:37] 2025-10-12 16:15:08,283 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:15:37] 2025-10-12 16:15:08,317 | INFO     | [job] control thread has finished
[2025-10-12 12:15:37] 2025-10-12 16:15:08,361 | INFO     | [payload] control thread has finished
[2025-10-12 12:15:37] 2025-10-12 16:15:08,381 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:15:37] 2025-10-12 16:15:08,412 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:15:37] 2025-10-12 16:15:08,768 | INFO     | [job] validate thread has finished
[2025-10-12 12:15:37] 2025-10-12 16:15:08,791 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:15:37] 2025-10-12 16:15:09,068 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:15:37] 2025-10-12 16:15:10,074 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:15:37] 2025-10-12 16:15:11,186 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:15:37] 2025-10-12 16:15:14,504 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:15:37] 2025-10-12 16:15:16,522 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:15:37] 2025-10-12 16:15:17,528 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:15:37] 2025-10-12 16:15:17,637 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140419884959552)>', '<ExcThread(monitor, started 140419115509504)>']
[2025-10-12 12:15:37] 2025-10-12 16:15:22,663 | INFO     | all workflow threads have been joined
[2025-10-12 12:15:37] 2025-10-12 16:15:22,666 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:15:37] 2025-10-12 16:15:22,666 | INFO     | traces error code: 0
[2025-10-12 12:15:37] 2025-10-12 16:15:22,666 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:15:37] 2025-10-12 16:15:37,041 | INFO     | PID=3360989 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 12:15:37] 2025-10-12 16:15:37,042 | INFO     | .. there are 22 such processes running
[2025-10-12 12:15:37] 2025-10-12 16:15:37,042 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:15:37] 2025-10-12 16:15:37,042 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:15:37] 2025-10-12 16:15:37,042 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:15:37] 2025-10-12 16:15:37,042 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:15:37] 2025-10-12 16:15:37,043 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 12:15:37] 2025-10-12 16:15:37,043 | INFO     | [monitor] control thread has ended
[2025-10-12 12:15:37] 2025-10-12 16:15:37,338 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:15:37] 2025-10-12 16:15:37,342 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:15:37] 2025-10-12 16:15:37,344 [wrapper] pilotpid: 3360989
[2025-10-12 12:15:37] 2025-10-12 16:15:37,346 [wrapper] Pilot exit status: 0
[2025-10-12 12:15:37] 2025-10-12 16:15:37,428 [wrapper] pandaids: 6839386675
[2025-10-12 12:15:37] 2025-10-12 16:15:37,521 [wrapper] cleanup supervisor_pilot 3524173 3360990
[2025-10-12 12:15:37] 2025-10-12 16:15:37,525 [wrapper] Test setup, not cleaning
[2025-10-12 12:15:37] 2025-10-12 16:15:37,529 [wrapper] apfmon messages muted
[2025-10-12 12:15:37] 2025-10-12 16:15:37,532 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:15:37] 2025-10-12 16:15:37,536 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:15:37]  *** Error codes and diagnostics ***
[2025-10-12 12:15:37]     "exeErrorCode": 0,
[2025-10-12 12:15:37]     "exeErrorDiag": "",
[2025-10-12 12:15:37]     "pilotErrorCode": 0,
[2025-10-12 12:15:37]     "pilotErrorDiag": "",
[2025-10-12 12:15:37]  *** Listing of results directory ***
[2025-10-12 12:15:37] total 412468
[2025-10-12 12:15:37] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 00:11 pilot3.tar.gz
[2025-10-12 12:15:37] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 00:14 queuedata.json
[2025-10-12 12:15:37] -rwx------. 1 boincer umatlas     36292 Oct 12 00:15 runpilot2-wrapper.sh
[2025-10-12 12:15:37] -rw-r--r--. 1 boincer umatlas       100 Oct 12 10:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:15:37] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 10:54 run_atlas
[2025-10-12 12:15:37] -rw-r--r--. 1 boincer umatlas       105 Oct 12 10:54 job.xml
[2025-10-12 12:15:37] -rw-r--r--. 2 boincer umatlas 220641493 Oct 12 10:54 EVNT.46676267._003281.pool.root.1
[2025-10-12 12:15:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 10:54 start_atlas.sh
[2025-10-12 12:15:37] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 10:54 shared
[2025-10-12 12:15:37] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 10:54 input.tar.gz
[2025-10-12 12:15:37] -rw-r--r--. 1 boincer umatlas         0 Oct 12 10:54 boinc_lockfile
[2025-10-12 12:15:37] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 10:54 pandaJob.out
[2025-10-12 12:15:37] -rw-------. 1 boincer umatlas    975528 Oct 12 10:55 agis_schedconf.cvmfs.json
[2025-10-12 12:15:37] -rw-------. 1 boincer umatlas   1560580 Oct 12 10:55 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:15:37] drwx------. 5 boincer umatlas      4096 Oct 12 10:55 pilot3
[2025-10-12 12:15:37] -rw-r--r--. 1 boincer umatlas      7173 Oct 12 12:11 init_data.xml
[2025-10-12 12:15:37] -rw-------. 1 boincer umatlas 195795969 Oct 12 12:13 HITS.46676269._070971.pool.root.1
[2025-10-12 12:15:37] -rw-r--r--. 1 boincer umatlas       530 Oct 12 12:14 boinc_task_state.xml
[2025-10-12 12:15:37] -rw-------. 1 boincer umatlas      1047 Oct 12 12:14 memory_monitor_summary.json
[2025-10-12 12:15:37] -rw-------. 1 boincer umatlas    337140 Oct 12 12:14 log.46676269._070971.job.log.tgz.1
[2025-10-12 12:15:37] -rw-------. 1 boincer umatlas      7806 Oct 12 12:15 heartbeat.json
[2025-10-12 12:15:37] -rw-r--r--. 1 boincer umatlas        27 Oct 12 12:15 wrapper_checkpoint.txt
[2025-10-12 12:15:37] -rw-------. 1 boincer umatlas        95 Oct 12 12:15 pilot_heartbeat.json
[2025-10-12 12:15:37] -rw-------. 1 boincer umatlas       893 Oct 12 12:15 pilotlog.txt
[2025-10-12 12:15:37] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 12:15 boinc_mmap_file
[2025-10-12 12:15:37] -rw-------. 1 boincer umatlas    678745 Oct 12 12:15 log.46676269._070971.job.log.1
[2025-10-12 12:15:37] -rw-------. 1 boincer umatlas       357 Oct 12 12:15 output.list
[2025-10-12 12:15:37] -rw-r--r--. 1 boincer umatlas       620 Oct 12 12:15 runtime_log
[2025-10-12 12:15:37] -rw-------. 1 boincer umatlas   1034240 Oct 12 12:15 result.tar.gz
[2025-10-12 12:15:37] -rw-r--r--. 1 boincer umatlas      8703 Oct 12 12:15 runtime_log.err
[2025-10-12 12:15:37] -rw-------. 1 boincer umatlas       657 Oct 12 12:15 BDFKDmJf2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmsCTMDm2nHcLm.diag
[2025-10-12 12:15:37] -rw-r--r--. 1 boincer umatlas     22427 Oct 12 12:15 stderr.txt
[2025-10-12 12:15:37] HITS file was successfully produced:
[2025-10-12 12:15:37] -rw-------. 1 boincer umatlas 195795969 Oct 12 12:13 shared/HITS.pool.root.1
[2025-10-12 12:15:37]  *** Contents of shared directory: ***
[2025-10-12 12:15:37] total 408272
[2025-10-12 12:15:37] -rw-r--r--. 2 boincer umatlas 220641493 Oct 12 10:54 ATLAS.root_0
[2025-10-12 12:15:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 10:54 start_atlas.sh
[2025-10-12 12:15:37] -rw-r--r--. 2 boincer umatlas    569682 Oct 12 10:54 input.tar.gz
[2025-10-12 12:15:37] -rw-------. 1 boincer umatlas 195795969 Oct 12 12:13 HITS.pool.root.1
[2025-10-12 12:15:37] -rw-------. 1 boincer umatlas   1034240 Oct 12 12:15 result.tar.gz
12:15:38 (3357199): run_atlas exited; CPU time 25698.747513
12:15:38 (3357199): called boinc_finish(0)

</stderr_txt>
]]>

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