Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
11:18:32 (33545): wrapper (7.7.26015): starting
11:18:32 (33545): wrapper: running run_atlas (--nthreads 5)
[2025-10-12 11:18:32] Arguments: --nthreads 5
[2025-10-12 11:18:32] Threads: 5
[2025-10-12 11:18:32] Checking for CVMFS
[2025-10-12 11:18:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 11:18:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 11:18:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 11:18:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 11:18:32] 2.11.0.0 2490241 3305 105156 151624 1 188 2656676 4096001 6410 130560 0 16568436 99.997 257233 5252 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 11:18:32] CVMFS is ok
[2025-10-12 11:18:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 11:18:32] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 11:18:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 11:18:32] Further information can be found at the LHC@home message board.
[2025-10-12 11:18:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 11:18:32] Checking for apptainer binary...
[2025-10-12 11:18:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 11:18:32] Running /usr/bin/apptainer --version
[2025-10-12 11:18:32] apptainer version 1.4.3
[2025-10-12 11:18:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 11:18:33] x32-linux4
[2025-10-12 11:18:33] apptainer works
[2025-10-12 11:18:33] Set ATHENA_PROC_NUMBER=5
[2025-10-12 11:18:33] Set ATHENA_CORE_NUMBER=5
[2025-10-12 11:18:33] Starting ATLAS job with PandaID=6839821407
[2025-10-12 11:18:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:13:58]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:13:58] 2025-10-12 17:12:57,119 | INFO     | right removable region: 106
[2025-10-12 13:13:58] 2025-10-12 17:12:57,119 | INFO     | sum of square deviations: 379832238.0
[2025-10-12 13:13:58] 2025-10-12 17:12:57,119 | INFO     | sum of deviations: 1342181292.0
[2025-10-12 13:13:58] 2025-10-12 17:12:57,119 | INFO     | mean x: 1760285881.0
[2025-10-12 13:13:58] 2025-10-12 17:12:57,119 | INFO     | mean y: 2357788.140186916
[2025-10-12 13:13:58] 2025-10-12 17:12:57,119 | INFO     | -- intersect: -6217816651.2130575
[2025-10-12 13:13:58] 2025-10-12 17:12:57,120 | INFO     | intersect: -6217816651.2130575
[2025-10-12 13:13:58] 2025-10-12 17:12:57,120 | INFO     | chi2: 0.0028639843628849855
[2025-10-12 13:13:58] 2025-10-12 17:12:57,120 | INFO     | current chi2=0.0028639843628849855 (change=99.73538507326374 %)
[2025-10-12 13:13:58] 2025-10-12 17:12:57,120 | INFO     | sum of square deviations: 329031285.5
[2025-10-12 13:13:58] 2025-10-12 17:12:57,120 | INFO     | sum of deviations: 1054951384.9999999
[2025-10-12 13:13:58] 2025-10-12 17:12:57,120 | INFO     | mean x: 1760286033.5
[2025-10-12 13:13:58] 2025-10-12 17:12:57,120 | INFO     | mean y: 2358693.156862745
[2025-10-12 13:13:58] 2025-10-12 17:12:57,120 | INFO     | -- intersect: -5641530720.626499
[2025-10-12 13:13:58] 2025-10-12 17:12:57,121 | INFO     | intersect: -5641530720.626499
[2025-10-12 13:13:58] 2025-10-12 17:12:57,121 | INFO     | chi2: 0.000502714867457157
[2025-10-12 13:13:58] 2025-10-12 17:12:57,121 | INFO     | current chi2=0.000502714867457157 (change=82.44701074587029 %)
[2025-10-12 13:13:58] 2025-10-12 17:12:57,121 | INFO     | sum of square deviations: 282974608.0
[2025-10-12 13:13:58] 2025-10-12 17:12:57,121 | INFO     | sum of deviations: 729944361.0
[2025-10-12 13:13:58] 2025-10-12 17:12:57,121 | INFO     | mean x: 1760286186.0
[2025-10-12 13:13:58] 2025-10-12 17:12:57,121 | INFO     | mean y: 2359763.556701031
[2025-10-12 13:13:58] 2025-10-12 17:12:57,121 | INFO     | -- intersect: -4538369117.731818
[2025-10-12 13:13:58] 2025-10-12 17:12:57,121 | INFO     | intersect: -4538369117.731818
[2025-10-12 13:13:58] 2025-10-12 17:12:57,122 | INFO     | chi2: 0.0003283961333780897
[2025-10-12 13:13:58] 2025-10-12 17:12:57,122 | INFO     | current chi2=0.0003283961333780897 (change=34.67546821537425 %)
[2025-10-12 13:13:58] 2025-10-12 17:12:57,122 | INFO     | sum of square deviations: 241429643.0
[2025-10-12 13:13:58] 2025-10-12 17:12:57,122 | INFO     | sum of deviations: 471783058.5
[2025-10-12 13:13:58] 2025-10-12 17:12:57,122 | INFO     | mean x: 1760286338.5
[2025-10-12 13:13:58] 2025-10-12 17:12:57,122 | INFO     | mean y: 2360710.945652174
[2025-10-12 13:13:58] 2025-10-12 17:12:57,122 | INFO     | -- intersect: -3437454144.818751
[2025-10-12 13:13:58] 2025-10-12 17:12:57,122 | INFO     | intersect: -3437454144.818751
[2025-10-12 13:13:58] 2025-10-12 17:12:57,123 | INFO     | chi2: 0.00021159257022472267
[2025-10-12 13:13:58] 2025-10-12 17:12:57,123 | INFO     | current chi2=0.00021159257022472267 (change=35.56788624514301 %)
[2025-10-12 13:13:58] 2025-10-12 17:12:57,123 | INFO     | sum of square deviations: 204163828.0
[2025-10-12 13:13:58] 2025-10-12 17:12:57,123 | INFO     | sum of deviations: 314553698.0
[2025-10-12 13:13:58] 2025-10-12 17:12:57,123 | INFO     | mean x: 1760286491.0
[2025-10-12 13:13:58] 2025-10-12 17:12:57,123 | INFO     | mean y: 2361351.459770115
[2025-10-12 13:13:58] 2025-10-12 17:12:57,123 | INFO     | -- intersect: -2709699010.591698
[2025-10-12 13:13:58] 2025-10-12 17:12:57,123 | INFO     | intersect: -2709699010.591698
[2025-10-12 13:13:58] 2025-10-12 17:12:57,123 | INFO     | chi2: 0.00016468389849182293
[2025-10-12 13:13:58] 2025-10-12 17:12:57,124 | INFO     | current chi2=0.00016468389849182293 (change=22.169337837845728 %)
[2025-10-12 13:13:58] 2025-10-12 17:12:57,124 | INFO     | left removable region: 50
[2025-10-12 13:13:58] 2025-10-12 17:12:57,124 | INFO     | sum of square deviations: 54438230.0
[2025-10-12 13:13:58] 2025-10-12 17:12:57,124 | INFO     | sum of deviations: -25037389.0
[2025-10-12 13:13:58] 2025-10-12 17:12:57,124 | INFO     | mean x: 1760287070.5
[2025-10-12 13:13:58] 2025-10-12 17:12:57,124 | INFO     | mean y: 2363179.25
[2025-10-12 13:13:58] 2025-10-12 17:12:57,124 | INFO     | -- intersect: 811959526.0779355
[2025-10-12 13:13:58] 2025-10-12 17:12:57,124 | INFO     | intersect: 811959526.0779355
[2025-10-12 13:13:58] 2025-10-12 17:12:57,124 | INFO     | chi2: 3.876357917032266e-06
[2025-10-12 13:13:58] 2025-10-12 17:12:57,124 | INFO     | -- intersect: 811959526.0779355
[2025-10-12 13:13:58] 2025-10-12 17:12:57,124 | INFO     | current memory leak: -0.46 B/s (using 56 data points, chi2=0.00)
[2025-10-12 13:13:58] 2025-10-12 17:12:57,125 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2025-10-12 13:13:58] 2025-10-12 17:12:57,125 | INFO     | ..............................
[2025-10-12 13:13:58] 2025-10-12 17:12:57,125 | INFO     | . Timing measurements:
[2025-10-12 13:13:58] 2025-10-12 17:12:57,125 | INFO     | . get job = 0 s
[2025-10-12 13:13:58] 2025-10-12 17:12:57,125 | INFO     | . initial setup = 2 s
[2025-10-12 13:13:58] 2025-10-12 17:12:57,125 | INFO     | . payload setup = 3 s
[2025-10-12 13:13:58] 2025-10-12 17:12:57,125 | INFO     | . stage-in = 0 s
[2025-10-12 13:13:58] 2025-10-12 17:12:57,125 | INFO     | . payload execution = 6829 s
[2025-10-12 13:13:58] 2025-10-12 17:12:57,125 | INFO     | . stage-out = 0 s
[2025-10-12 13:13:58] 2025-10-12 17:12:57,125 | INFO     | . log creation = 0 s
[2025-10-12 13:13:58] 2025-10-12 17:12:57,125 | INFO     | ..............................
[2025-10-12 13:13:58] 2025-10-12 17:12:57,194 | INFO     | 
[2025-10-12 13:13:58] 2025-10-12 17:12:57,195 | INFO     | job summary report
[2025-10-12 13:13:58] 2025-10-12 17:12:57,195 | INFO     | --------------------------------------------------
[2025-10-12 13:13:58] 2025-10-12 17:12:57,195 | INFO     | PanDA job id: 6839821407
[2025-10-12 13:13:58] 2025-10-12 17:12:57,195 | INFO     | task id: 46676269
[2025-10-12 13:13:58] 2025-10-12 17:12:57,195 | INFO     | errors: (none)
[2025-10-12 13:13:58] 2025-10-12 17:12:57,195 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:13:58] 2025-10-12 17:12:57,195 | INFO     | pilot state: finished 
[2025-10-12 13:13:58] 2025-10-12 17:12:57,195 | INFO     | transexitcode: 0
[2025-10-12 13:13:58] 2025-10-12 17:12:57,195 | INFO     | exeerrorcode: 0
[2025-10-12 13:13:58] 2025-10-12 17:12:57,195 | INFO     | exeerrordiag: 
[2025-10-12 13:13:58] 2025-10-12 17:12:57,195 | INFO     | exitcode: 0
[2025-10-12 13:13:58] 2025-10-12 17:12:57,195 | INFO     | exitmsg: OK
[2025-10-12 13:13:58] 2025-10-12 17:12:57,195 | INFO     | cpuconsumptiontime: 27258 s
[2025-10-12 13:13:58] 2025-10-12 17:12:57,195 | INFO     | nevents: 400
[2025-10-12 13:13:58] 2025-10-12 17:12:57,195 | INFO     | neventsw: 0
[2025-10-12 13:13:58] 2025-10-12 17:12:57,195 | INFO     | pid: 44031
[2025-10-12 13:13:58] 2025-10-12 17:12:57,195 | INFO     | pgrp: 44031
[2025-10-12 13:13:58] 2025-10-12 17:12:57,195 | INFO     | corecount: 5
[2025-10-12 13:13:58] 2025-10-12 17:12:57,196 | INFO     | event service: False
[2025-10-12 13:13:58] 2025-10-12 17:12:57,196 | INFO     | sizes: {0: 2348892, 1: 2348892, 4: 2349182, 11: 2349210, 6836: 2376487, 6837: 2376486, 6838: 2385738, 6842: 2385876}
[2025-10-12 13:13:58] 2025-10-12 17:12:57,196 | INFO     | --------------------------------------------------
[2025-10-12 13:13:58] 2025-10-12 17:12:57,196 | INFO     | 
[2025-10-12 13:13:58] 2025-10-12 17:12:57,196 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-10-12 13:13:58] 2025-10-12 17:12:57,216 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:13:58] 2025-10-12 17:12:57,217 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:13:58] 2025-10-12 17:12:57,217 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:13:58] 2025-10-12 17:12:57,217 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:13:58] 2025-10-12 17:12:57,217 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:13:58] 2025-10-12 17:12:57,217 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:13:58] 2025-10-12 17:12:57,217 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:13:58] 2025-10-12 17:12:57,217 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:13:58] 2025-10-12 17:12:57,217 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:13:58] 2025-10-12 17:12:57,217 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:13:58] 2025-10-12 17:12:57,217 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:13:58] 2025-10-12 17:12:57,217 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:13:58] 2025-10-12 17:12:57,217 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:13:58] 2025-10-12 17:12:57,217 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:13:58] 2025-10-12 17:12:57,217 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:13:58] 2025-10-12 17:12:57,217 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:13:58] 2025-10-12 17:12:57,218 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:13:58] 2025-10-12 17:12:57,218 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:13:58] 2025-10-12 17:12:57,218 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:13:58] 2025-10-12 17:12:57,218 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:13:58] 2025-10-12 17:12:57,218 | INFO     | job 6839821407 has completed (purged errors)
[2025-10-12 13:13:58] 2025-10-12 17:12:57,218 | INFO     | overall cleanup function is called
[2025-10-12 13:13:58] 2025-10-12 17:12:58,225 | INFO     | --- collectZombieJob: --- 10, [44031]
[2025-10-12 13:13:58] 2025-10-12 17:12:58,226 | INFO     | zombie collector waiting for pid 44031
[2025-10-12 13:13:58] 2025-10-12 17:12:58,228 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:13:58] 2025-10-12 17:12:58,228 | INFO     | collected zombie processes
[2025-10-12 13:13:58] 2025-10-12 17:12:58,228 | INFO     | will attempt to kill all subprocesses of pid=44031
[2025-10-12 13:13:58] 2025-10-12 17:12:58,393 | INFO     | process IDs to be killed: [44031] (in reverse order)
[2025-10-12 13:13:58] 2025-10-12 17:12:58,448 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:13:58] 2025-10-12 17:12:58,448 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:13:58] 2025-10-12 17:12:58,453 | INFO     | did not find any defunct processes belonging to 44031
[2025-10-12 13:13:58] 2025-10-12 17:12:58,457 | INFO     | did not find any defunct processes belonging to 44031
[2025-10-12 13:13:58] 2025-10-12 17:12:58,457 | INFO     | ready for new job
[2025-10-12 13:13:58] 2025-10-12 17:12:58,457 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:13:58] 2025-10-12 17:12:58,458 | INFO     | ***************************************
[2025-10-12 13:13:58] 2025-10-12 17:12:58,458 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:13:58] 2025-10-12 17:12:58,459 | INFO     | ***************************************
[2025-10-12 13:13:58] 2025-10-12 17:12:58,459 | INFO     | 
[2025-10-12 13:13:58] 2025-10-12 17:12:58,460 | INFO     | architecture information:
[2025-10-12 13:13:58] 2025-10-12 17:12:58,460 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:13:58] 2025-10-12 17:12:58,476 | INFO     | cat /etc/os-release:
[2025-10-12 13:13:58] NAME="CentOS Linux"
[2025-10-12 13:13:58] VERSION="7 (Core)"
[2025-10-12 13:13:58] ID="centos"
[2025-10-12 13:13:58] ID_LIKE="rhel fedora"
[2025-10-12 13:13:58] VERSION_ID="7"
[2025-10-12 13:13:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:13:58] ANSI_COLOR="0;31"
[2025-10-12 13:13:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:13:58] HOME_URL="https://www.centos.org/"
[2025-10-12 13:13:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:13:58] 
[2025-10-12 13:13:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:13:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:13:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:13:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:13:58] 
[2025-10-12 13:13:58] 2025-10-12 17:12:58,476 | INFO     | ***************************************
[2025-10-12 13:13:58] 2025-10-12 17:12:58,980 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-10-12 13:13:58] 2025-10-12 17:12:58,993 | INFO     | sufficient remaining disk space (148399718400 B)
[2025-10-12 13:13:58] 2025-10-12 17:12:58,993 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:13:58] 2025-10-12 17:12:58,993 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:13:58] 2025-10-12 17:12:58,993 | INFO     | update_server=False
[2025-10-12 13:13:58] 2025-10-12 17:12:58,993 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:13:58] 2025-10-12 17:12:58,994 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:13:58] 2025-10-12 17:12:58,994 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:13:58] 2025-10-12 17:12:58,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:13:58] 2025-10-12 17:12:59,251 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 13:13:58] 2025-10-12 17:12:59,251 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 13:13:58] 2025-10-12 17:12:59,251 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:13:58] 2025-10-12 17:12:59,251 | INFO     | will abort loop
[2025-10-12 13:13:58] 2025-10-12 17:12:59,258 | INFO     | all job control threads have been joined
[2025-10-12 13:13:58] 2025-10-12 17:12:59,829 | INFO     | all payload control threads have been joined
[2025-10-12 13:13:58] 2025-10-12 17:12:59,834 | INFO     | all data control threads have been joined
[2025-10-12 13:13:58] 2025-10-12 17:12:59,999 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:13:58] 2025-10-12 17:12:59,999 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:13:58] 2025-10-12 17:13:00,247 | INFO     | [job] validate thread has finished
[2025-10-12 13:13:58] 2025-10-12 17:13:00,256 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:13:58] 2025-10-12 17:13:00,263 | INFO     | [job] control thread has finished
[2025-10-12 13:13:58] 2025-10-12 17:13:00,308 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:13:58] 2025-10-12 17:13:00,541 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:13:58] 2025-10-12 17:13:00,631 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:13:58] 2025-10-12 17:13:00,633 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:13:58] 2025-10-12 17:13:00,649 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:13:58] 2025-10-12 17:13:00,834 | INFO     | [payload] control thread has finished
[2025-10-12 13:13:58] 2025-10-12 17:13:00,839 | INFO     | [data] control thread has finished
[2025-10-12 13:13:58] 2025-10-12 17:13:00,999 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:13:58] 2025-10-12 17:13:01,223 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:13:58] 2025-10-12 17:13:02,999 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:13:58] 2025-10-12 17:13:09,932 | INFO     | job.realtimelogging is not enabled
[2025-10-12 13:13:58] 2025-10-12 17:13:10,937 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:13:58] 2025-10-12 17:13:29,244 | INFO     | PID=37386 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 13:13:58] 2025-10-12 17:13:29,244 | INFO     | .. there are 8 such processes running
[2025-10-12 13:13:58] 2025-10-12 17:13:29,244 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:13:58] 2025-10-12 17:13:29,244 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:13:58] 2025-10-12 17:13:29,244 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:13:58] 2025-10-12 17:13:52,229 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:13:58] 2025-10-12 17:13:53,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132546253408064)>', '<ExcThread(monitor, started 132545593186048)>']
[2025-10-12 13:13:58] 2025-10-12 17:13:53,367 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:13:58] 2025-10-12 17:13:53,367 | INFO     | [monitor] control thread has ended
[2025-10-12 13:13:58] 2025-10-12 17:13:58,095 | INFO     | all workflow threads have been joined
[2025-10-12 13:13:58] 2025-10-12 17:13:58,095 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:13:58] 2025-10-12 17:13:58,095 | INFO     | traces error code: 0
[2025-10-12 13:13:58] 2025-10-12 17:13:58,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:13:58] 2025-10-12 17:13:58,172 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:13:58] 2025-10-12 17:13:58,174 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:13:58] 2025-10-12 17:13:58,176 [wrapper] pilotpid: 37386
[2025-10-12 13:13:58] 2025-10-12 17:13:58,178 [wrapper] Pilot exit status: 0
[2025-10-12 13:13:58] 2025-10-12 17:13:58,186 [wrapper] pandaids: 6839821407
[2025-10-12 13:13:58] 2025-10-12 17:13:58,221 [wrapper] cleanup supervisor_pilot  194403 37387
[2025-10-12 13:13:58] 2025-10-12 17:13:58,223 [wrapper] Test setup, not cleaning
[2025-10-12 13:13:58] 2025-10-12 17:13:58,225 [wrapper] apfmon messages muted
[2025-10-12 13:13:58] 2025-10-12 17:13:58,228 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:13:58] 2025-10-12 17:13:58,230 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:13:58]  *** Error codes and diagnostics ***
[2025-10-12 13:13:58]     "exeErrorCode": 0,
[2025-10-12 13:13:58]     "exeErrorDiag": "",
[2025-10-12 13:13:58]     "pilotErrorCode": 0,
[2025-10-12 13:13:58]     "pilotErrorDiag": "",
[2025-10-12 13:13:58]  *** Listing of results directory ***
[2025-10-12 13:13:58] total 407948
[2025-10-12 13:13:58] -rw-r--r-- 1 boinc boinc    557409 Oct 12 05:04 pilot3.tar.gz
[2025-10-12 13:13:58] -rwx------ 1 boinc boinc     36292 Oct 12 05:11 runpilot2-wrapper.sh
[2025-10-12 13:13:58] -rw-r--r-- 1 boinc boinc      5112 Oct 12 05:11 queuedata.json
[2025-10-12 13:13:58] -rw-r--r-- 1 boinc boinc       100 Oct 12 11:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:13:58] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 11:18 run_atlas
[2025-10-12 13:13:58] -rw-r--r-- 1 boinc boinc       105 Oct 12 11:18 job.xml
[2025-10-12 13:13:58] -rw-r--r-- 2 boinc boinc 220903686 Oct 12 11:18 EVNT.46676267._003564.pool.root.1
[2025-10-12 13:13:58] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:18 start_atlas.sh
[2025-10-12 13:13:58] drwxrwx--x 2 boinc boinc      4096 Oct 12 11:18 shared
[2025-10-12 13:13:58] -rw-r--r-- 2 boinc boinc    569675 Oct 12 11:18 input.tar.gz
[2025-10-12 13:13:58] -rw-r--r-- 1 boinc boinc      9723 Oct 12 11:18 init_data.xml
[2025-10-12 13:13:58] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:18 boinc_setup_complete
[2025-10-12 13:13:58] -rw-r--r-- 1 boinc boinc         0 Oct 12 11:18 boinc_lockfile
[2025-10-12 13:13:58] -rw-r--r-- 1 boinc boinc      2550 Oct 12 11:18 pandaJob.out
[2025-10-12 13:13:58] -rw------- 1 boinc boinc    975528 Oct 12 11:18 agis_schedconf.cvmfs.json
[2025-10-12 13:13:58] -rw------- 1 boinc boinc   1560580 Oct 12 11:18 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:13:58] drwx------ 5 boinc boinc      4096 Oct 12 11:18 pilot3
[2025-10-12 13:13:58] -rw------- 1 boinc boinc 190305146 Oct 12 13:12 HITS.46676269._075095.pool.root.1
[2025-10-12 13:13:58] -rw-r--r-- 1 boinc boinc       529 Oct 12 13:12 boinc_task_state.xml
[2025-10-12 13:13:58] -rw------- 1 boinc boinc        95 Oct 12 13:12 pilot_heartbeat.json
[2025-10-12 13:13:58] -rw------- 1 boinc boinc      1025 Oct 12 13:12 memory_monitor_summary.json
[2025-10-12 13:13:58] -rw------- 1 boinc boinc    310749 Oct 12 13:12 log.46676269._075095.job.log.tgz.1
[2025-10-12 13:13:58] -rw------- 1 boinc boinc      7736 Oct 12 13:12 heartbeat.json
[2025-10-12 13:13:58] -rw-r--r-- 1 boinc boinc      8192 Oct 12 13:13 boinc_mmap_file
[2025-10-12 13:13:58] -rw-r--r-- 1 boinc boinc        27 Oct 12 13:13 wrapper_checkpoint.txt
[2025-10-12 13:13:58] -rw------- 1 boinc boinc      5087 Oct 12 13:13 pilotlog.txt
[2025-10-12 13:13:58] -rw------- 1 boinc boinc    998267 Oct 12 13:13 log.46676269._075095.job.log.1
[2025-10-12 13:13:58] -rw------- 1 boinc boinc       357 Oct 12 13:13 output.list
[2025-10-12 13:13:58] -rw-r--r-- 1 boinc boinc       620 Oct 12 13:13 runtime_log
[2025-10-12 13:13:58] -rw------- 1 boinc boinc   1331200 Oct 12 13:13 result.tar.gz
[2025-10-12 13:13:58] -rw-r--r-- 1 boinc boinc      8764 Oct 12 13:13 runtime_log.err
[2025-10-12 13:13:58] -rw------- 1 boinc boinc       643 Oct 12 13:13 JoPNDmJI7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJJjNDmWR5ZWm.diag
[2025-10-12 13:13:58] -rw-r--r-- 1 boinc boinc     20998 Oct 12 13:13 stderr.txt
[2025-10-12 13:13:58] HITS file was successfully produced:
[2025-10-12 13:13:58] -rw------- 1 boinc boinc 190305146 Oct 12 13:12 shared/HITS.pool.root.1
[2025-10-12 13:13:58]  *** Contents of shared directory: ***
[2025-10-12 13:13:58] total 403460
[2025-10-12 13:13:58] -rw-r--r-- 2 boinc boinc 220903686 Oct 12 11:18 ATLAS.root_0
[2025-10-12 13:13:58] -rw-r--r-- 2 boinc boinc     15120 Oct 12 11:18 start_atlas.sh
[2025-10-12 13:13:58] -rw-r--r-- 2 boinc boinc    569675 Oct 12 11:18 input.tar.gz
[2025-10-12 13:13:58] -rw------- 1 boinc boinc 190305146 Oct 12 13:12 HITS.pool.root.1
[2025-10-12 13:13:58] -rw------- 1 boinc boinc   1331200 Oct 12 13:13 result.tar.gz
13:13:59 (33545): run_atlas exited; CPU time 27348.033460
13:13:59 (33545): called boinc_finish(0)

</stderr_txt>
]]>

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