Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:41:51 (1740041): wrapper (7.7.26015): starting
21:41:51 (1740041): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 21:41:51] Arguments: --nthreads 4
[2025-10-13 21:41:51] Threads: 4
[2025-10-13 21:41:51] Checking for CVMFS
[2025-10-13 21:41:51] No cvmfs_config command found, will try listing directly
[2025-10-13 21:41:51] CVMFS is ok
[2025-10-13 21:41:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 21:41:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 21:41:51] Further information can be found at the LHC@home message board.
[2025-10-13 21:41:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 21:41:51] Checking for apptainer binary...
[2025-10-13 21:41:51] which: no apptainer in ((null))
[2025-10-13 21:41:51] apptainer is not installed, using version from CVMFS
[2025-10-13 21:41:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 21:41:51] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-10-13 21:41:51] apptainer works
[2025-10-13 21:41:51] Set ATHENA_PROC_NUMBER=4
[2025-10-13 21:41:51] Set ATHENA_CORE_NUMBER=4
[2025-10-13 21:41:51] Starting ATLAS job with PandaID=6839821437
[2025-10-13 21:41:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 01:15:06]  *** The last 200 lines of the pilot log: ***
[2025-10-14 01:15:06] 2025-10-13 22:55:20,681 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 01:15:06] 2025-10-13 22:55:20,681 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 01:15:06] 2025-10-13 22:55:20,685 | INFO     | fitting pss+swap vs Time
[2025-10-14 01:15:06] 2025-10-13 22:55:20,685 | INFO     | sum of square deviations: 2126803949.4947298
[2025-10-14 01:15:06] 2025-10-13 22:55:20,686 | INFO     | sum of deviations: 20027331620.3579
[2025-10-14 01:15:06] 2025-10-13 22:55:20,686 | INFO     | mean x: 1760390309.505263
[2025-10-14 01:15:06] 2025-10-13 22:55:20,687 | INFO     | mean y: 2320423.142105263
[2025-10-14 01:15:06] 2025-10-13 22:55:20,687 | INFO     | -- intersect: -16574628532.638336
[2025-10-14 01:15:06] 2025-10-13 22:55:20,687 | INFO     | intersect: -16574628532.638336
[2025-10-14 01:15:06] 2025-10-13 22:55:20,687 | INFO     | chi2: 1.3241597242024659
[2025-10-14 01:15:06] 2025-10-13 22:55:20,687 | INFO     | sum of square deviations: 1963275606.9945984
[2025-10-14 01:15:06] 2025-10-13 22:55:20,688 | INFO     | sum of deviations: 19377966272.421627
[2025-10-14 01:15:06] 2025-10-13 22:55:20,689 | INFO     | mean x: 1760390157.0054054
[2025-10-14 01:15:06] 2025-10-13 22:55:20,689 | INFO     | mean y: 2319817.5783783784
[2025-10-14 01:15:06] 2025-10-13 22:55:20,689 | INFO     | -- intersect: -17373122003.84472
[2025-10-14 01:15:06] 2025-10-13 22:55:20,689 | INFO     | intersect: -17373122003.84472
[2025-10-14 01:15:06] 2025-10-13 22:55:20,689 | INFO     | chi2: 1.3250637972142605
[2025-10-14 01:15:06] 2025-10-13 22:55:20,689 | INFO     | current chi2=1.3250637972142605 (change=-0.0682752235451916 %)
[2025-10-14 01:15:06] 2025-10-13 22:55:20,689 | INFO     | right removable region: 184
[2025-10-14 01:15:06] 2025-10-13 22:55:20,690 | INFO     | sum of square deviations: 1963274996.9945984
[2025-10-14 01:15:06] 2025-10-13 22:55:20,691 | INFO     | sum of deviations: -4057410788.7567573
[2025-10-14 01:15:06] 2025-10-13 22:55:20,691 | INFO     | mean x: 1760390462.0054054
[2025-10-14 01:15:06] 2025-10-13 22:55:20,691 | INFO     | mean y: 2342582.756756757
[2025-10-14 01:15:06] 2025-10-13 22:55:20,691 | INFO     | -- intersect: 3640461167.213459
[2025-10-14 01:15:06] 2025-10-13 22:55:20,691 | INFO     | intersect: 3640461167.213459
[2025-10-14 01:15:06] 2025-10-13 22:55:20,691 | INFO     | chi2: 0.020898668231779795
[2025-10-14 01:15:06] 2025-10-13 22:55:20,692 | INFO     | current chi2=0.020898668231779795 (change=98.42174113516654 %)
[2025-10-14 01:15:06] 2025-10-13 22:55:20,692 | INFO     | sum of square deviations: 1808350856.9944415
[2025-10-14 01:15:06] 2025-10-13 22:55:20,693 | INFO     | sum of deviations: -4653345389.216671
[2025-10-14 01:15:06] 2025-10-13 22:55:20,693 | INFO     | mean x: 1760390614.5055556
[2025-10-14 01:15:06] 2025-10-13 22:55:20,693 | INFO     | mean y: 2343142.716666667
[2025-10-14 01:15:06] 2025-10-13 22:55:20,693 | INFO     | -- intersect: 4532274664.32675
[2025-10-14 01:15:06] 2025-10-13 22:55:20,693 | INFO     | intersect: 4532274664.32675
[2025-10-14 01:15:06] 2025-10-13 22:55:20,694 | INFO     | chi2: 0.015557895356984113
[2025-10-14 01:15:06] 2025-10-13 22:55:20,694 | INFO     | current chi2=0.015557895356984113 (change=25.555565625345334 %)
[2025-10-14 01:15:06] 2025-10-13 22:55:20,694 | INFO     | sum of square deviations: 1661798966.9942875
[2025-10-14 01:15:06] 2025-10-13 22:55:20,695 | INFO     | sum of deviations: -3042944473.0457096
[2025-10-14 01:15:06] 2025-10-13 22:55:20,695 | INFO     | mean x: 1760390767.0057142
[2025-10-14 01:15:06] 2025-10-13 22:55:20,695 | INFO     | mean y: 2341464.0457142857
[2025-10-14 01:15:06] 2025-10-13 22:55:20,695 | INFO     | -- intersect: 3225818828.7895265
[2025-10-14 01:15:06] 2025-10-13 22:55:20,695 | INFO     | intersect: 3225818828.7895265
[2025-10-14 01:15:06] 2025-10-13 22:55:20,696 | INFO     | chi2: 0.013515986881987296
[2025-10-14 01:15:06] 2025-10-13 22:55:20,696 | INFO     | current chi2=0.013515986881987296 (change=13.124580337790876 %)
[2025-10-14 01:15:06] 2025-10-13 22:55:20,696 | INFO     | left removable region: 30
[2025-10-14 01:15:06] 2025-10-13 22:55:20,696 | INFO     | sum of square deviations: 1132458260.493509
[2025-10-14 01:15:06] 2025-10-13 22:55:20,697 | INFO     | sum of deviations: 1471167608.077922
[2025-10-14 01:15:06] 2025-10-13 22:55:20,697 | INFO     | mean x: 1760391041.5064936
[2025-10-14 01:15:06] 2025-10-13 22:55:20,697 | INFO     | mean y: 2335705.922077922
[2025-10-14 01:15:06] 2025-10-13 22:55:20,697 | INFO     | -- intersect: -2284574432.9878535
[2025-10-14 01:15:06] 2025-10-13 22:55:20,697 | INFO     | intersect: -2284574432.9878535
[2025-10-14 01:15:06] 2025-10-13 22:55:20,698 | INFO     | chi2: 0.003670245949402111
[2025-10-14 01:15:06] 2025-10-13 22:55:20,698 | INFO     | -- intersect: -2284574432.9878535
[2025-10-14 01:15:06] 2025-10-13 22:55:20,698 | INFO     | current memory leak: 1.30 B/s (using 154 data points, chi2=0.00)
[2025-10-14 01:15:06] 2025-10-13 22:55:20,698 | INFO     | could have reported an average CPU frequency of 2591 MHz (10 samples)
[2025-10-14 01:15:06] 2025-10-13 22:55:20,699 | INFO     | ..............................
[2025-10-14 01:15:06] 2025-10-13 22:55:20,699 | INFO     | . Timing measurements:
[2025-10-14 01:15:06] 2025-10-13 22:55:20,699 | INFO     | . get job = 0 s
[2025-10-14 01:15:06] 2025-10-13 22:55:20,699 | INFO     | . initial setup = 1 s
[2025-10-14 01:15:06] 2025-10-13 22:55:20,699 | INFO     | . payload setup = 4 s
[2025-10-14 01:15:06] 2025-10-13 22:55:20,699 | INFO     | . stage-in = 0 s
[2025-10-14 01:15:06] 2025-10-13 22:55:20,699 | INFO     | . payload execution = 11568 s
[2025-10-14 01:15:06] 2025-10-13 22:55:20,699 | INFO     | . stage-out = 1 s
[2025-10-14 01:15:06] 2025-10-13 22:55:20,699 | INFO     | . log creation = 0 s
[2025-10-14 01:15:06] 2025-10-13 22:55:20,699 | INFO     | ..............................
[2025-10-14 01:15:06] 2025-10-13 22:55:20,793 | INFO     | 
[2025-10-14 01:15:06] 2025-10-13 22:55:20,794 | INFO     | job summary report
[2025-10-14 01:15:06] 2025-10-13 22:55:20,794 | INFO     | --------------------------------------------------
[2025-10-14 01:15:06] 2025-10-13 22:55:20,794 | INFO     | PanDA job id: 6839821437
[2025-10-14 01:15:06] 2025-10-13 22:55:20,794 | INFO     | task id: 46676269
[2025-10-14 01:15:06] 2025-10-13 22:55:20,794 | INFO     | errors: (none)
[2025-10-14 01:15:06] 2025-10-13 22:55:20,794 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 01:15:06] 2025-10-13 22:55:20,794 | INFO     | pilot state: finished 
[2025-10-14 01:15:06] 2025-10-13 22:55:20,794 | INFO     | transexitcode: 0
[2025-10-14 01:15:06] 2025-10-13 22:55:20,794 | INFO     | exeerrorcode: 0
[2025-10-14 01:15:06] 2025-10-13 22:55:20,794 | INFO     | exeerrordiag: 
[2025-10-14 01:15:06] 2025-10-13 22:55:20,794 | INFO     | exitcode: 0
[2025-10-14 01:15:06] 2025-10-13 22:55:20,794 | INFO     | exitmsg: OK
[2025-10-14 01:15:06] 2025-10-13 22:55:20,795 | INFO     | cpuconsumptiontime: 44172 s
[2025-10-14 01:15:06] 2025-10-13 22:55:20,795 | INFO     | nevents: 400
[2025-10-14 01:15:06] 2025-10-13 22:55:20,795 | INFO     | neventsw: 0
[2025-10-14 01:15:06] 2025-10-13 22:55:20,795 | INFO     | pid: 1762400
[2025-10-14 01:15:06] 2025-10-13 22:55:20,795 | INFO     | pgrp: 1762400
[2025-10-14 01:15:06] 2025-10-13 22:55:20,795 | INFO     | corecount: 4
[2025-10-14 01:15:06] 2025-10-13 22:55:20,795 | INFO     | event service: False
[2025-10-14 01:15:06] 2025-10-13 22:55:20,795 | INFO     | sizes: {0: 2348753, 1: 2348895, 5: 2349157, 11: 2349213, 11576: 2378627, 11578: 2387647, 11579: 2387831, 11585: 2388025}
[2025-10-14 01:15:06] 2025-10-13 22:55:20,795 | INFO     | --------------------------------------------------
[2025-10-14 01:15:06] 2025-10-13 22:55:20,795 | INFO     | 
[2025-10-14 01:15:06] 2025-10-13 22:55:20,795 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-10-14 01:15:06] 2025-10-13 22:55:20,817 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 01:15:06] 2025-10-13 22:55:20,817 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 01:15:06] 2025-10-13 22:55:20,817 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 01:15:06] 2025-10-13 22:55:20,817 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 01:15:06] 2025-10-13 22:55:20,817 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 01:15:06] 2025-10-13 22:55:20,817 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 01:15:06] 2025-10-13 22:55:20,818 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 01:15:06] 2025-10-13 22:55:20,818 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 01:15:06] 2025-10-13 22:55:20,818 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 01:15:06] 2025-10-13 22:55:20,818 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 01:15:06] 2025-10-13 22:55:20,818 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 01:15:06] 2025-10-13 22:55:20,818 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 01:15:06] 2025-10-13 22:55:20,818 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 01:15:06] 2025-10-13 22:55:20,818 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 01:15:06] 2025-10-13 22:55:20,818 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 01:15:06] 2025-10-13 22:55:20,818 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 01:15:06] 2025-10-13 22:55:20,819 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 01:15:06] 2025-10-13 22:55:20,819 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 01:15:06] 2025-10-13 22:55:20,819 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 01:15:06] 2025-10-13 22:55:20,819 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 01:15:06] 2025-10-13 22:55:20,819 | INFO     | job 6839821437 has completed (purged errors)
[2025-10-14 01:15:06] 2025-10-13 22:55:20,819 | INFO     | overall cleanup function is called
[2025-10-14 01:15:06] 2025-10-13 22:55:21,827 | INFO     | --- collectZombieJob: --- 10, [1762400]
[2025-10-14 01:15:06] 2025-10-13 22:55:21,827 | INFO     | zombie collector waiting for pid 1762400
[2025-10-14 01:15:06] 2025-10-13 22:55:21,827 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 01:15:06] 2025-10-13 22:55:21,827 | INFO     | collected zombie processes
[2025-10-14 01:15:06] 2025-10-13 22:55:21,827 | INFO     | will attempt to kill all subprocesses of pid=1762400
[2025-10-14 01:15:06] 2025-10-13 22:55:22,221 | INFO     | process IDs to be killed: [1762400] (in reverse order)
[2025-10-14 01:15:06] 2025-10-13 22:55:22,309 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 01:15:06] 2025-10-13 22:55:22,310 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 01:15:06] 2025-10-13 22:55:22,319 | INFO     | did not find any defunct processes belonging to 1762400
[2025-10-14 01:15:06] 2025-10-13 22:55:22,329 | INFO     | did not find any defunct processes belonging to 1762400
[2025-10-14 01:15:06] 2025-10-13 22:55:22,329 | INFO     | ready for new job
[2025-10-14 01:15:06] 2025-10-13 22:55:22,329 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 01:15:06] 2025-10-13 22:55:22,331 | INFO     | ***************************************
[2025-10-14 01:15:06] 2025-10-13 22:55:22,331 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 01:15:06] 2025-10-13 22:55:22,332 | INFO     | ***************************************
[2025-10-14 01:15:06] 2025-10-13 22:55:22,332 | INFO     | 
[2025-10-14 01:15:06] 2025-10-13 22:55:22,334 | INFO     | architecture information:
[2025-10-14 01:15:06] 2025-10-13 22:55:22,334 | INFO     | executing command: cat /etc/os-release
[2025-10-14 01:15:06] 2025-10-13 22:55:22,345 | INFO     | cat /etc/os-release:
[2025-10-14 01:15:06] NAME="CentOS Linux"
[2025-10-14 01:15:06] VERSION="7 (Core)"
[2025-10-14 01:15:06] ID="centos"
[2025-10-14 01:15:06] ID_LIKE="rhel fedora"
[2025-10-14 01:15:06] VERSION_ID="7"
[2025-10-14 01:15:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 01:15:06] ANSI_COLOR="0;31"
[2025-10-14 01:15:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 01:15:06] HOME_URL="https://www.centos.org/"
[2025-10-14 01:15:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 01:15:06] 
[2025-10-14 01:15:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 01:15:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 01:15:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 01:15:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 01:15:06] 
[2025-10-14 01:15:06] 2025-10-13 22:55:22,345 | INFO     | ***************************************
[2025-10-14 01:15:06] 2025-10-13 22:55:22,848 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-10-14 01:15:06] 2025-10-13 22:55:22,859 | INFO     | sufficient remaining disk space (698871709696 B)
[2025-10-14 01:15:06] 2025-10-13 22:55:22,859 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 01:15:06] 2025-10-13 22:55:22,859 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 01:15:06] 2025-10-13 22:55:22,859 | INFO     | update_server=False
[2025-10-14 01:15:06] 2025-10-13 22:55:22,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 01:15:06] 2025-10-13 22:55:22,860 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 01:15:06] 2025-10-13 22:55:22,860 | INFO     | aborting loop
[2025-10-14 01:15:06] 2025-10-13 22:55:23,652 | INFO     | all job control threads have been joined
[2025-10-14 01:15:06] 2025-10-13 22:55:23,865 | INFO     | [job] retrieve thread has finished
[2025-10-14 01:15:06] 2025-10-13 22:55:23,865 | INFO     | [job] job monitor thread has finished
[2025-10-14 01:15:06] 2025-10-13 22:55:23,959 | INFO     | all data control threads have been joined
[2025-10-14 01:15:06] 2025-10-13 22:55:24,210 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 01:15:06] 2025-10-13 22:55:24,296 | INFO     | all payload control threads have been joined
[2025-10-14 01:15:06] 2025-10-13 22:55:24,341 | INFO     | [payload] validate_post thread has finished
[2025-10-14 01:15:06] 2025-10-13 22:55:24,658 | INFO     | [job] control thread has finished
[2025-10-14 01:15:06] 2025-10-13 22:55:24,681 | INFO     | [job] validate thread has finished
[2025-10-14 01:15:06] 2025-10-13 22:55:24,964 | INFO     | [data] control thread has finished
[2025-10-14 01:15:06] 2025-10-13 22:55:25,037 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 01:15:06] 2025-10-13 22:55:25,046 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 01:15:06] 2025-10-13 22:55:25,094 | INFO     | [data] copytool_in thread has finished
[2025-10-14 01:15:06] 2025-10-13 22:55:25,285 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 01:15:06] 2025-10-13 22:55:25,301 | INFO     | [payload] control thread has finished
[2025-10-14 01:15:06] 2025-10-13 22:55:25,374 | INFO     | [payload] failed_post thread has finished
[2025-10-14 01:15:06] 2025-10-13 22:55:25,463 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 01:15:06] 2025-10-13 22:55:25,800 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 01:15:06] 2025-10-13 22:55:26,215 | INFO     | [data] copytool_out thread has finished
[2025-10-14 01:15:06] 2025-10-13 22:55:26,800 | INFO     | [job] queue monitor thread has finished
[2025-10-14 01:15:06] 2025-10-13 22:55:29,469 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 01:15:06] 2025-10-13 22:55:33,337 | INFO     | job.realtimelogging is not enabled
[2025-10-14 01:15:06] 2025-10-13 22:55:34,342 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 01:15:06] 2025-10-13 22:55:53,458 | INFO     | PID=1744015 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 01:15:06] 2025-10-13 22:55:53,459 | INFO     | .. there are 8 such processes running
[2025-10-14 01:15:06] 2025-10-13 22:55:53,459 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 01:15:06] 2025-10-13 22:55:53,459 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 01:15:06] 2025-10-13 22:55:53,459 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 01:15:06] 2025-10-13 22:56:19,628 | INFO     | [monitor] cgroup control has ended
[2025-10-14 01:15:06] 2025-10-13 22:56:20,760 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23148476110656)>', '<ExcThread(monitor, started 23148237915904)>']
[2025-10-14 01:15:06] 2025-10-13 22:56:21,581 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 01:15:06] 2025-10-13 22:56:21,581 | INFO     | [monitor] control thread has ended
[2025-10-14 01:15:06] 2025-10-13 22:56:25,785 | INFO     | all workflow threads have been joined
[2025-10-14 01:15:06] 2025-10-13 22:56:25,785 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 01:15:06] 2025-10-13 22:56:25,785 | INFO     | traces error code: 0
[2025-10-14 01:15:06] 2025-10-13 22:56:25,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 01:15:06] 2025-10-13 22:56:25,929 [wrapper] ==== pilot stdout END ====
[2025-10-14 01:15:06] 2025-10-13 22:56:25,933 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 01:15:06] 2025-10-13 22:56:25,935 [wrapper] pilotpid: 1744015
[2025-10-14 01:15:06] 2025-10-13 22:56:25,938 [wrapper] Pilot exit status: 0
[2025-10-14 01:15:06] 2025-10-13 22:56:25,948 [wrapper] pandaids: 6839821437
[2025-10-14 01:15:06] 2025-10-13 22:56:26,023 [wrapper] cleanup supervisor_pilot 2079077 1744016
[2025-10-14 01:15:06] 2025-10-13 22:56:26,026 [wrapper] Test setup, not cleaning
[2025-10-14 01:15:06] 2025-10-13 22:56:26,030 [wrapper] apfmon messages muted
[2025-10-14 01:15:06] 2025-10-13 22:56:26,032 [wrapper] ==== wrapper stdout END ====
[2025-10-14 01:15:06] 2025-10-13 22:56:26,035 [wrapper] ==== wrapper stderr END ====
[2025-10-14 01:15:06]  *** Error codes and diagnostics ***
[2025-10-14 01:15:06]     "exeErrorCode": 0,
[2025-10-14 01:15:06]     "exeErrorDiag": "",
[2025-10-14 01:15:06]     "pilotErrorCode": 0,
[2025-10-14 01:15:06]     "pilotErrorDiag": "",
[2025-10-14 01:15:06]  *** Listing of results directory ***
[2025-10-14 01:15:06] total 421456
[2025-10-14 01:15:06] -rw-r--r-- 1 boinc boinc    557409 Oct 12 11:04 pilot3.tar.gz
[2025-10-14 01:15:06] -rw-r--r-- 1 boinc boinc      5112 Oct 12 11:11 queuedata.json
[2025-10-14 01:15:06] -rwx------ 1 boinc boinc     36292 Oct 12 11:12 runpilot2-wrapper.sh
[2025-10-14 01:15:06] -rw-r--r-- 1 boinc boinc       100 Oct 13 21:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 01:15:06] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 21:41 run_atlas
[2025-10-14 01:15:06] -rw-r--r-- 1 boinc boinc       105 Oct 13 21:41 job.xml
[2025-10-14 01:15:06] -rw-r--r-- 1 boinc boinc      6635 Oct 13 21:41 init_data.xml
[2025-10-14 01:15:06] -rw-r--r-- 2 boinc boinc 221534608 Oct 13 21:41 EVNT.46676267._003565.pool.root.1
[2025-10-14 01:15:06] -rw-r--r-- 2 boinc boinc     15120 Oct 13 21:41 start_atlas.sh
[2025-10-14 01:15:06] drwxrwx--x 2 boinc boinc      4096 Oct 13 21:41 shared
[2025-10-14 01:15:06] -rw-r--r-- 2 boinc boinc    569683 Oct 13 21:41 input.tar.gz
[2025-10-14 01:15:06] -rw-r--r-- 1 boinc boinc         0 Oct 13 21:41 boinc_lockfile
[2025-10-14 01:15:06] -rw-r--r-- 1 boinc boinc      2549 Oct 13 21:41 pandaJob.out
[2025-10-14 01:15:06] -rw------- 1 boinc boinc    972799 Oct 13 21:41 agis_schedconf.cvmfs.json
[2025-10-14 01:15:06] drwx------ 5 boinc boinc      4096 Oct 13 21:42 pilot3
[2025-10-14 01:15:06] -rw------- 1 boinc boinc 202097034 Oct 14 00:54 HITS.46676269._075125.pool.root.1
[2025-10-14 01:15:06] -rw-r--r-- 1 boinc boinc       529 Oct 14 00:54 boinc_task_state.xml
[2025-10-14 01:15:06] -rw------- 1 boinc boinc        95 Oct 14 00:55 pilot_heartbeat.json
[2025-10-14 01:15:06] -rw------- 1 boinc boinc      1029 Oct 14 00:55 memory_monitor_summary.json
[2025-10-14 01:15:06] -rw------- 1 boinc boinc   1560580 Oct 14 00:55 agis_ddmendpoints.agis.ALL.json
[2025-10-14 01:15:06] -rw------- 1 boinc boinc    372534 Oct 14 00:55 log.46676269._075125.job.log.tgz.1
[2025-10-14 01:15:06] -rw------- 1 boinc boinc      7825 Oct 14 00:55 heartbeat.json
[2025-10-14 01:15:06] -rw------- 1 boinc boinc      4905 Oct 14 00:56 pilotlog.txt
[2025-10-14 01:15:06] -rw------- 1 boinc boinc   1644599 Oct 14 00:56 log.46676269._075125.job.log.1
[2025-10-14 01:15:06] -rw------- 1 boinc boinc       357 Oct 14 00:56 output.list
[2025-10-14 01:15:06] -rw-r--r-- 1 boinc boinc       620 Oct 14 00:56 runtime_log
[2025-10-14 01:15:06] -rw------- 1 boinc boinc   2037760 Oct 14 00:56 result.tar.gz
[2025-10-14 01:15:06] -rw------- 1 boinc boinc       665 Oct 14 00:56 tU0KDmIJ7R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoJjNDmo6Vien.diag
[2025-10-14 01:15:06] -rw-r--r-- 1 boinc boinc      9070 Oct 14 00:56 runtime_log.err
[2025-10-14 01:15:06] -rw-r--r-- 1 boinc boinc        27 Oct 14 01:14 wrapper_checkpoint.txt
[2025-10-14 01:15:06] -rw-r--r-- 1 boinc boinc      8192 Oct 14 01:15 boinc_mmap_file
[2025-10-14 01:15:06] -rw-r--r-- 1 boinc boinc     20768 Oct 14 01:15 stderr.txt
[2025-10-14 01:15:06] HITS file was successfully produced:
[2025-10-14 01:15:06] -rw------- 1 boinc boinc 202097034 Oct 14 00:54 shared/HITS.pool.root.1
[2025-10-14 01:15:06]  *** Contents of shared directory: ***
[2025-10-14 01:15:06] total 416284
[2025-10-14 01:15:06] -rw-r--r-- 2 boinc boinc 221534608 Oct 13 21:41 ATLAS.root_0
[2025-10-14 01:15:06] -rw-r--r-- 2 boinc boinc     15120 Oct 13 21:41 start_atlas.sh
[2025-10-14 01:15:06] -rw-r--r-- 2 boinc boinc    569683 Oct 13 21:41 input.tar.gz
[2025-10-14 01:15:06] -rw------- 1 boinc boinc 202097034 Oct 14 00:54 HITS.pool.root.1
[2025-10-14 01:15:06] -rw------- 1 boinc boinc   2037760 Oct 14 00:56 result.tar.gz
01:15:08 (1740041): run_atlas exited; CPU time 44639.276577
01:15:08 (1740041): called boinc_finish(0)

</stderr_txt>
]]>

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