Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:25:20 (8788): wrapper (7.7.26015): starting
09:25:20 (8788): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 09:25:20] Arguments: --nthreads 8
[2025-10-12 09:25:20] Threads: 8
[2025-10-12 09:25:20] Checking for CVMFS
[2025-10-12 09:25:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:25:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:25:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:25:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:25:21] 2.11.2.0 11495 52958 128680 151621 0 57 17606505 18432000 1833 130560 0 48316611 99.976 2390435 27891 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 09:25:21] CVMFS is ok
[2025-10-12 09:25:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:25:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:25:21] Further information can be found at the LHC@home message board.
[2025-10-12 09:25:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:25:21] Checking for apptainer binary...
[2025-10-12 09:25:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:25:21] Running /usr/bin/apptainer --version
[2025-10-12 09:25:21] apptainer version 1.3.2-1.el7
[2025-10-12 09:25:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:25:22] c-206-31.aglt2.org
[2025-10-12 09:25:22] apptainer works
[2025-10-12 09:25:22] Set ATHENA_PROC_NUMBER=8
[2025-10-12 09:25:22] Set ATHENA_CORE_NUMBER=8
[2025-10-12 09:25:22] Starting ATLAS job with PandaID=6839661009
[2025-10-12 09:25:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 12:27:56]  *** The last 200 lines of the pilot log: ***
[2025-10-12 12:27:56] 2025-10-12 16:26:56,455 | INFO     | extracted standard info from prmon json
[2025-10-12 12:27:56] 2025-10-12 16:26:56,455 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 12:27:56] 2025-10-12 16:26:56,455 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 12:27:56] 2025-10-12 16:26:56,456 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 12:27:56] 2025-10-12 16:26:56,456 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 12:27:56] 2025-10-12 16:26:56,459 | INFO     | fitting pss+swap vs Time
[2025-10-12 12:27:56] 2025-10-12 16:26:56,459 | INFO     | sum of square deviations: 1748737904.5
[2025-10-12 12:27:56] 2025-10-12 16:26:56,460 | INFO     | sum of deviations: -2366803751.5000043
[2025-10-12 12:27:56] 2025-10-12 16:26:56,460 | INFO     | mean x: 1760280958.5
[2025-10-12 12:27:56] 2025-10-12 16:26:56,460 | INFO     | mean y: 2513141.0168539328
[2025-10-12 12:27:56] 2025-10-12 16:26:56,461 | INFO     | -- intersect: 2384939670.2016473
[2025-10-12 12:27:56] 2025-10-12 16:26:56,461 | INFO     | intersect: 2384939670.2016473
[2025-10-12 12:27:56] 2025-10-12 16:26:56,461 | INFO     | chi2: 1.5266627076153487
[2025-10-12 12:27:56] 2025-10-12 16:26:56,461 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 12:27:56] 2025-10-12 16:26:56,462 | INFO     | sum of deviations: -2098961017.0000021
[2025-10-12 12:27:56] 2025-10-12 16:26:56,463 | INFO     | mean x: 1760280806.0
[2025-10-12 12:27:56] 2025-10-12 16:26:56,463 | INFO     | mean y: 2513426.1965317917
[2025-10-12 12:27:56] 2025-10-12 16:26:56,463 | INFO     | -- intersect: 2303871007.4835505
[2025-10-12 12:27:56] 2025-10-12 16:26:56,463 | INFO     | intersect: 2303871007.4835505
[2025-10-12 12:27:56] 2025-10-12 16:26:56,463 | INFO     | chi2: 1.526839149090912
[2025-10-12 12:27:56] 2025-10-12 16:26:56,464 | INFO     | current chi2=1.526839149090912 (change=-0.011557331864009021 %)
[2025-10-12 12:27:56] 2025-10-12 16:26:56,464 | INFO     | right removable region: 172
[2025-10-12 12:27:56] 2025-10-12 16:26:56,464 | INFO     | sum of square deviations: 1605470102.0
[2025-10-12 12:27:56] 2025-10-12 16:26:56,465 | INFO     | sum of deviations: -27967742136.000008
[2025-10-12 12:27:56] 2025-10-12 16:26:56,465 | INFO     | mean x: 1760281111.0
[2025-10-12 12:27:56] 2025-10-12 16:26:56,465 | INFO     | mean y: 2540033.641618497
[2025-10-12 12:27:56] 2025-10-12 16:26:56,466 | INFO     | -- intersect: 30667133624.011456
[2025-10-12 12:27:56] 2025-10-12 16:26:56,466 | INFO     | intersect: 30667133624.011456
[2025-10-12 12:27:56] 2025-10-12 16:26:56,466 | INFO     | chi2: 0.15171910680620018
[2025-10-12 12:27:56] 2025-10-12 16:26:56,466 | INFO     | current chi2=0.15171910680620018 (change=90.06204146800796 %)
[2025-10-12 12:27:56] 2025-10-12 16:26:56,467 | INFO     | sum of square deviations: 1470248962.0
[2025-10-12 12:27:56] 2025-10-12 16:26:56,468 | INFO     | sum of deviations: -27990603838.0
[2025-10-12 12:27:56] 2025-10-12 16:26:56,468 | INFO     | mean x: 1760281263.5
[2025-10-12 12:27:56] 2025-10-12 16:26:56,468 | INFO     | mean y: 2540000.25
[2025-10-12 12:27:56] 2025-10-12 16:26:56,468 | INFO     | -- intersect: 33514779602.89397
[2025-10-12 12:27:56] 2025-10-12 16:26:56,468 | INFO     | intersect: 33514779602.89397
[2025-10-12 12:27:56] 2025-10-12 16:26:56,469 | INFO     | chi2: 0.1331027513440792
[2025-10-12 12:27:56] 2025-10-12 16:26:56,469 | INFO     | current chi2=0.1331027513440792 (change=12.270277524043664 %)
[2025-10-12 12:27:56] 2025-10-12 16:26:56,469 | INFO     | left removable region: 20
[2025-10-12 12:27:56] 2025-10-12 16:26:56,469 | INFO     | sum of square deviations: 1088905998.0
[2025-10-12 12:27:56] 2025-10-12 16:26:56,470 | INFO     | sum of deviations: -18251151566.0
[2025-10-12 12:27:56] 2025-10-12 16:26:56,470 | INFO     | mean x: 1760281385.5
[2025-10-12 12:27:56] 2025-10-12 16:26:56,470 | INFO     | mean y: 2529869.8289473685
[2025-10-12 12:27:56] 2025-10-12 16:26:56,471 | INFO     | -- intersect: 29506603154.92162
[2025-10-12 12:27:56] 2025-10-12 16:26:56,471 | INFO     | intersect: 29506603154.92162
[2025-10-12 12:27:56] 2025-10-12 16:26:56,471 | INFO     | chi2: 0.11780945152364543
[2025-10-12 12:27:56] 2025-10-12 16:26:56,471 | INFO     | -- intersect: 29506603154.92162
[2025-10-12 12:27:56] 2025-10-12 16:26:56,472 | INFO     | current memory leak: -16.76 B/s (using 152 data points, chi2=0.12)
[2025-10-12 12:27:56] 2025-10-12 16:26:56,472 | INFO     | could have reported an average CPU frequency of 2556 MHz (9 samples)
[2025-10-12 12:27:56] 2025-10-12 16:26:56,472 | INFO     | ..............................
[2025-10-12 12:27:56] 2025-10-12 16:26:56,472 | INFO     | . Timing measurements:
[2025-10-12 12:27:56] 2025-10-12 16:26:56,473 | INFO     | . get job = 0 s
[2025-10-12 12:27:56] 2025-10-12 16:26:56,473 | INFO     | . initial setup = 2 s
[2025-10-12 12:27:56] 2025-10-12 16:26:56,473 | INFO     | . payload setup = 4 s
[2025-10-12 12:27:56] 2025-10-12 16:26:56,473 | INFO     | . stage-in = 0 s
[2025-10-12 12:27:56] 2025-10-12 16:26:56,473 | INFO     | . payload execution = 10853 s
[2025-10-12 12:27:56] 2025-10-12 16:26:56,475 | INFO     | . stage-out = 1 s
[2025-10-12 12:27:56] 2025-10-12 16:26:56,475 | INFO     | . log creation = 0 s
[2025-10-12 12:27:56] 2025-10-12 16:26:56,475 | INFO     | ..............................
[2025-10-12 12:27:56] 2025-10-12 16:26:56,628 | INFO     | 
[2025-10-12 12:27:56] 2025-10-12 16:26:56,629 | INFO     | job summary report
[2025-10-12 12:27:56] 2025-10-12 16:26:56,629 | INFO     | --------------------------------------------------
[2025-10-12 12:27:56] 2025-10-12 16:26:56,629 | INFO     | PanDA job id: 6839661009
[2025-10-12 12:27:56] 2025-10-12 16:26:56,629 | INFO     | task id: 46676269
[2025-10-12 12:27:56] 2025-10-12 16:26:56,630 | INFO     | errors: (none)
[2025-10-12 12:27:56] 2025-10-12 16:26:56,630 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 12:27:56] 2025-10-12 16:26:56,630 | INFO     | pilot state: finished 
[2025-10-12 12:27:56] 2025-10-12 16:26:56,631 | INFO     | transexitcode: 0
[2025-10-12 12:27:56] 2025-10-12 16:26:56,631 | INFO     | exeerrorcode: 0
[2025-10-12 12:27:56] 2025-10-12 16:26:56,631 | INFO     | exeerrordiag: 
[2025-10-12 12:27:56] 2025-10-12 16:26:56,631 | INFO     | exitcode: 0
[2025-10-12 12:27:56] 2025-10-12 16:26:56,632 | INFO     | exitmsg: OK
[2025-10-12 12:27:56] 2025-10-12 16:26:56,632 | INFO     | cpuconsumptiontime: 81558 s
[2025-10-12 12:27:56] 2025-10-12 16:26:56,632 | INFO     | nevents: 400
[2025-10-12 12:27:56] 2025-10-12 16:26:56,632 | INFO     | neventsw: 0
[2025-10-12 12:27:56] 2025-10-12 16:26:56,633 | INFO     | pid: 18909
[2025-10-12 12:27:56] 2025-10-12 16:26:56,633 | INFO     | pgrp: 18909
[2025-10-12 12:27:56] 2025-10-12 16:26:56,633 | INFO     | corecount: 8
[2025-10-12 12:27:56] 2025-10-12 16:26:56,633 | INFO     | event service: False
[2025-10-12 12:27:56] 2025-10-12 16:26:56,634 | INFO     | sizes: {0: 2348856, 3: 2349118, 11: 2349146, 10862: 2378104, 10864: 2387102, 10865: 2387158, 10869: 2387544}
[2025-10-12 12:27:56] 2025-10-12 16:26:56,634 | INFO     | --------------------------------------------------
[2025-10-12 12:27:56] 2025-10-12 16:26:56,634 | INFO     | 
[2025-10-12 12:27:56] 2025-10-12 16:26:56,634 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 12:27:56] 2025-10-12 16:26:56,667 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 12:27:56] 2025-10-12 16:26:56,667 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 12:27:56] 2025-10-12 16:26:56,667 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 12:27:56] 2025-10-12 16:26:56,668 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 12:27:56] 2025-10-12 16:26:56,668 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 12:27:56] 2025-10-12 16:26:56,668 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 12:27:56] 2025-10-12 16:26:56,669 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 12:27:56] 2025-10-12 16:26:56,669 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 12:27:56] 2025-10-12 16:26:56,669 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 12:27:56] 2025-10-12 16:26:56,670 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 12:27:56] 2025-10-12 16:26:56,670 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 12:27:56] 2025-10-12 16:26:56,671 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 12:27:56] 2025-10-12 16:26:56,671 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 12:27:56] 2025-10-12 16:26:56,671 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 12:27:56] 2025-10-12 16:26:56,672 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 12:27:56] 2025-10-12 16:26:56,672 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 12:27:56] 2025-10-12 16:26:56,672 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 12:27:56] 2025-10-12 16:26:56,676 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 12:27:56] 2025-10-12 16:26:56,676 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 12:27:56] 2025-10-12 16:26:56,676 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 12:27:56] 2025-10-12 16:26:56,676 | INFO     | job 6839661009 has completed (purged errors)
[2025-10-12 12:27:56] 2025-10-12 16:26:56,677 | INFO     | overall cleanup function is called
[2025-10-12 12:27:56] 2025-10-12 16:26:56,935 | INFO     | number of running child processes to parent process 18909: 1
[2025-10-12 12:27:56] 2025-10-12 16:26:56,936 | INFO     | maximum number of monitored processes: 6
[2025-10-12 12:27:56] 2025-10-12 16:26:56,936 | INFO     | aborting job monitoring since job object (job id=6839661009) has expired
[2025-10-12 12:27:56] 2025-10-12 16:26:56,968 | INFO     | PID=12538 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 12:27:56] 2025-10-12 16:26:56,968 | INFO     | .. there are 3 such processes running
[2025-10-12 12:27:56] 2025-10-12 16:26:57,686 | INFO     | --- collectZombieJob: --- 10, [18909]
[2025-10-12 12:27:56] 2025-10-12 16:26:57,686 | INFO     | zombie collector waiting for pid 18909
[2025-10-12 12:27:56] 2025-10-12 16:26:57,686 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 12:27:56] 2025-10-12 16:26:57,687 | INFO     | collected zombie processes
[2025-10-12 12:27:56] 2025-10-12 16:26:57,687 | INFO     | will attempt to kill all subprocesses of pid=18909
[2025-10-12 12:27:56] 2025-10-12 16:26:57,843 | INFO     | process IDs to be killed: [18909] (in reverse order)
[2025-10-12 12:27:56] 2025-10-12 16:26:57,903 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 12:27:56] 2025-10-12 16:26:57,904 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 12:27:56] 2025-10-12 16:26:57,909 | INFO     | did not find any defunct processes belonging to 18909
[2025-10-12 12:27:56] 2025-10-12 16:26:57,913 | INFO     | did not find any defunct processes belonging to 18909
[2025-10-12 12:27:56] 2025-10-12 16:26:57,913 | INFO     | ready for new job
[2025-10-12 12:27:56] 2025-10-12 16:26:57,913 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 12:27:56] 2025-10-12 16:26:57,915 | INFO     | ***************************************
[2025-10-12 12:27:56] 2025-10-12 16:26:57,915 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 12:27:56] 2025-10-12 16:26:57,916 | INFO     | ***************************************
[2025-10-12 12:27:56] 2025-10-12 16:26:57,916 | INFO     | 
[2025-10-12 12:27:56] 2025-10-12 16:26:57,917 | INFO     | architecture information:
[2025-10-12 12:27:56] 2025-10-12 16:26:57,917 | INFO     | executing command: cat /etc/os-release
[2025-10-12 12:27:56] 2025-10-12 16:26:57,936 | INFO     | cat /etc/os-release:
[2025-10-12 12:27:56] NAME="CentOS Linux"
[2025-10-12 12:27:56] VERSION="7 (Core)"
[2025-10-12 12:27:56] ID="centos"
[2025-10-12 12:27:56] ID_LIKE="rhel fedora"
[2025-10-12 12:27:56] VERSION_ID="7"
[2025-10-12 12:27:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 12:27:56] ANSI_COLOR="0;31"
[2025-10-12 12:27:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 12:27:56] HOME_URL="https://www.centos.org/"
[2025-10-12 12:27:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 12:27:56] 
[2025-10-12 12:27:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 12:27:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 12:27:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 12:27:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 12:27:56] 
[2025-10-12 12:27:56] 2025-10-12 16:26:57,937 | INFO     | ***************************************
[2025-10-12 12:27:56] 2025-10-12 16:26:58,441 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 12:27:56] 2025-10-12 16:26:58,459 | INFO     | sufficient remaining disk space (28326232064 B)
[2025-10-12 12:27:56] 2025-10-12 16:26:58,460 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 12:27:56] 2025-10-12 16:26:58,460 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 12:27:56] 2025-10-12 16:26:58,460 | INFO     | update_server=False
[2025-10-12 12:27:56] 2025-10-12 16:26:58,460 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 12:27:56] 2025-10-12 16:26:58,461 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:27:56] 2025-10-12 16:26:58,461 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 12:27:56] 2025-10-12 16:26:58,461 | INFO     | aborting loop
[2025-10-12 12:27:56] 2025-10-12 16:26:58,740 | INFO     | all data control threads have been joined
[2025-10-12 12:27:56] 2025-10-12 16:26:58,853 | INFO     | all job control threads have been joined
[2025-10-12 12:27:56] 2025-10-12 16:26:59,061 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 12:27:56] 2025-10-12 16:26:59,110 | INFO     | all payload control threads have been joined
[2025-10-12 12:27:56] 2025-10-12 16:26:59,466 | INFO     | [job] retrieve thread has finished
[2025-10-12 12:27:56] 2025-10-12 16:26:59,466 | INFO     | [job] queue monitor thread has finished
[2025-10-12 12:27:56] 2025-10-12 16:26:59,467 | INFO     | [job] job monitor thread has finished
[2025-10-12 12:27:56] 2025-10-12 16:26:59,515 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 12:27:56] 2025-10-12 16:26:59,610 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 12:27:56] 2025-10-12 16:26:59,666 | INFO     | [payload] failed_post thread has finished
[2025-10-12 12:27:56] 2025-10-12 16:26:59,746 | INFO     | [data] control thread has finished
[2025-10-12 12:27:56] 2025-10-12 16:26:59,811 | INFO     | [data] copytool_in thread has finished
[2025-10-12 12:27:56] 2025-10-12 16:26:59,829 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 12:27:56] 2025-10-12 16:26:59,859 | INFO     | [job] control thread has finished
[2025-10-12 12:27:56] 2025-10-12 16:27:00,116 | INFO     | [payload] control thread has finished
[2025-10-12 12:27:56] 2025-10-12 16:27:00,201 | INFO     | [payload] validate_post thread has finished
[2025-10-12 12:27:56] 2025-10-12 16:27:00,890 | INFO     | [job] validate thread has finished
[2025-10-12 12:27:56] 2025-10-12 16:27:00,892 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 12:27:56] 2025-10-12 16:27:01,837 | INFO     | [data] copytool_out thread has finished
[2025-10-12 12:27:56] 2025-10-12 16:27:03,070 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 12:27:56] 2025-10-12 16:27:09,186 | INFO     | job.realtimelogging is not enabled
[2025-10-12 12:27:56] 2025-10-12 16:27:10,188 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 12:27:56] 2025-10-12 16:27:29,181 | INFO     | PID=12538 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 12:27:56] 2025-10-12 16:27:29,182 | INFO     | .. there are 3 such processes running
[2025-10-12 12:27:56] 2025-10-12 16:27:29,182 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 12:27:56] 2025-10-12 16:27:29,182 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 12:27:56] 2025-10-12 16:27:29,182 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 12:27:56] 2025-10-12 16:27:50,335 | INFO     | [monitor] cgroup control has ended
[2025-10-12 12:27:56] 2025-10-12 16:27:51,016 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139843831965504)>', '<ExcThread(monitor, started 139843245954816)>']
[2025-10-12 12:27:56] 2025-10-12 16:27:51,287 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 12:27:56] 2025-10-12 16:27:51,287 | INFO     | [monitor] control thread has ended
[2025-10-12 12:27:56] 2025-10-12 16:27:56,041 | INFO     | all workflow threads have been joined
[2025-10-12 12:27:56] 2025-10-12 16:27:56,041 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 12:27:56] 2025-10-12 16:27:56,041 | INFO     | traces error code: 0
[2025-10-12 12:27:56] 2025-10-12 16:27:56,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 12:27:56] 2025-10-12 16:27:56,129 [wrapper] ==== pilot stdout END ====
[2025-10-12 12:27:56] 2025-10-12 16:27:56,131 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 12:27:56] 2025-10-12 16:27:56,133 [wrapper] pilotpid: 12538
[2025-10-12 12:27:56] 2025-10-12 16:27:56,135 [wrapper] Pilot exit status: 0
[2025-10-12 12:27:56] 2025-10-12 16:27:56,145 [wrapper] pandaids: 6839661009
[2025-10-12 12:27:56] 2025-10-12 16:27:56,179 [wrapper] cleanup supervisor_pilot 22035 12539
[2025-10-12 12:27:56] 2025-10-12 16:27:56,182 [wrapper] Test setup, not cleaning
[2025-10-12 12:27:56] 2025-10-12 16:27:56,184 [wrapper] apfmon messages muted
[2025-10-12 12:27:56] 2025-10-12 16:27:56,187 [wrapper] ==== wrapper stdout END ====
[2025-10-12 12:27:56] 2025-10-12 16:27:56,189 [wrapper] ==== wrapper stderr END ====
[2025-10-12 12:27:56]  *** Error codes and diagnostics ***
[2025-10-12 12:27:56]     "exeErrorCode": 0,
[2025-10-12 12:27:56]     "exeErrorDiag": "",
[2025-10-12 12:27:56]     "pilotErrorCode": 0,
[2025-10-12 12:27:56]     "pilotErrorDiag": "",
[2025-10-12 12:27:56]  *** Listing of results directory ***
[2025-10-12 12:27:56] total 411776
[2025-10-12 12:27:56] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 03:58 pilot3.tar.gz
[2025-10-12 12:27:56] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 04:19 queuedata.json
[2025-10-12 12:27:56] -rwx------ 1 boincer umatlas     36292 Oct 12 04:20 runpilot2-wrapper.sh
[2025-10-12 12:27:56] -rw-r--r-- 1 boincer umatlas       100 Oct 12 09:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 12:27:56] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 09:25 run_atlas
[2025-10-12 12:27:56] -rw-r--r-- 1 boincer umatlas       105 Oct 12 09:25 job.xml
[2025-10-12 12:27:56] -rw-r--r-- 2 boincer umatlas 220161204 Oct 12 09:25 EVNT.46676267._003529.pool.root.1
[2025-10-12 12:27:56] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:25 start_atlas.sh
[2025-10-12 12:27:56] drwxrwx--x 2 boincer umatlas      4096 Oct 12 09:25 shared
[2025-10-12 12:27:56] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 09:25 input.tar.gz
[2025-10-12 12:27:56] -rw-r--r-- 1 boincer umatlas         0 Oct 12 09:25 boinc_lockfile
[2025-10-12 12:27:56] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 09:25 pandaJob.out
[2025-10-12 12:27:56] -rw------- 1 boincer umatlas    975528 Oct 12 09:25 agis_schedconf.cvmfs.json
[2025-10-12 12:27:56] drwx------ 5 boincer umatlas      4096 Oct 12 09:25 pilot3
[2025-10-12 12:27:56] -rw-r--r-- 1 boincer umatlas      5951 Oct 12 12:21 init_data.xml
[2025-10-12 12:27:56] -rw------- 1 boincer umatlas 193719708 Oct 12 12:26 HITS.46676269._074147.pool.root.1
[2025-10-12 12:27:56] -rw-r--r-- 1 boincer umatlas       530 Oct 12 12:26 boinc_task_state.xml
[2025-10-12 12:27:56] -rw------- 1 boincer umatlas      1054 Oct 12 12:26 memory_monitor_summary.json
[2025-10-12 12:27:56] -rw------- 1 boincer umatlas   1560580 Oct 12 12:26 agis_ddmendpoints.agis.ALL.json
[2025-10-12 12:27:56] -rw------- 1 boincer umatlas    409304 Oct 12 12:26 log.46676269._074147.job.log.tgz.1
[2025-10-12 12:27:56] -rw------- 1 boincer umatlas      7874 Oct 12 12:26 heartbeat.json
[2025-10-12 12:27:56] -rw------- 1 boincer umatlas        95 Oct 12 12:27 pilot_heartbeat.json
[2025-10-12 12:27:56] -rw-r--r-- 1 boincer umatlas        28 Oct 12 12:27 wrapper_checkpoint.txt
[2025-10-12 12:27:56] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 12:27 boinc_mmap_file
[2025-10-12 12:27:56] -rw------- 1 boincer umatlas      4893 Oct 12 12:27 pilotlog.txt
[2025-10-12 12:27:56] -rw------- 1 boincer umatlas   1525399 Oct 12 12:27 log.46676269._074147.job.log.1
[2025-10-12 12:27:56] -rw------- 1 boincer umatlas       357 Oct 12 12:27 output.list
[2025-10-12 12:27:56] -rw-r--r-- 1 boincer umatlas       620 Oct 12 12:27 runtime_log
[2025-10-12 12:27:56] -rw------- 1 boincer umatlas   1955840 Oct 12 12:27 result.tar.gz
[2025-10-12 12:27:56] -rw------- 1 boincer umatlas       662 Oct 12 12:27 yzqLDmvU6R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm47iNDmuJ0Opn.diag
[2025-10-12 12:27:56] -rw-r--r-- 1 boincer umatlas      8704 Oct 12 12:27 runtime_log.err
[2025-10-12 12:27:56] -rw-r--r-- 1 boincer umatlas     21089 Oct 12 12:27 stderr.txt
[2025-10-12 12:27:56] HITS file was successfully produced:
[2025-10-12 12:27:56] -rw------- 1 boincer umatlas 193719708 Oct 12 12:26 shared/HITS.pool.root.1
[2025-10-12 12:27:56]  *** Contents of shared directory: ***
[2025-10-12 12:27:56] total 406680
[2025-10-12 12:27:56] -rw-r--r-- 2 boincer umatlas 220161204 Oct 12 09:25 ATLAS.root_0
[2025-10-12 12:27:56] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:25 start_atlas.sh
[2025-10-12 12:27:56] -rw-r--r-- 2 boincer umatlas    569679 Oct 12 09:25 input.tar.gz
[2025-10-12 12:27:56] -rw------- 1 boincer umatlas 193719708 Oct 12 12:26 HITS.pool.root.1
[2025-10-12 12:27:56] -rw------- 1 boincer umatlas   1955840 Oct 12 12:27 result.tar.gz
12:27:57 (8788): run_atlas exited; CPU time 81692.441519
12:27:57 (8788): called boinc_finish(0)

</stderr_txt>
]]>

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