Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-14 01:55:00 (1232): vboxwrapper version 26210
2025-10-14 01:55:00 (1232): BOINC client version: 8.2.4
2025-10-14 01:55:01 (1232): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-10-14 01:55:01 (1232): Successfully copied 'init_data.xml' to the shared directory.
2025-10-14 01:55:01 (1232): Create VM. (boinc_4f287f5b654765f8, slot#4)
2025-10-14 01:55:02 (1232): Setting Memory Size for VM. (4800MB)
2025-10-14 01:55:02 (1232): Setting CPU Count for VM. (8)
2025-10-14 01:55:02 (1232): Setting Chipset Options for VM.
2025-10-14 01:55:03 (1232): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-14 01:55:03 (1232): Setting Boot Options for VM.
2025-10-14 01:55:03 (1232): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-14 01:55:04 (1232): Enabling VM Network Access.
2025-10-14 01:55:04 (1232): Disabling USB Support for VM.
2025-10-14 01:55:04 (1232): Disabling COM Port Support for VM.
2025-10-14 01:55:05 (1232): Disabling LPT Port Support for VM.
2025-10-14 01:55:05 (1232): Disabling Audio Support for VM.
2025-10-14 01:55:05 (1232): Disabling Clipboard Support for VM.
2025-10-14 01:55:05 (1232): Disabling Drag and Drop Support for VM.
2025-10-14 01:55:06 (1232): Adding storage controller(s) to VM.
2025-10-14 01:55:06 (1232): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-14 01:55:06 (1232): Adding VirtualBox Guest Additions to VM.
2025-10-14 01:55:07 (1232): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-14 01:55:07 (1232): forwarding host port 53499 to guest port 80
2025-10-14 01:55:07 (1232): Enabling remote desktop for VM.
2025-10-14 01:55:07 (1232): Required extension pack not installed, remote desktop not enabled.
2025-10-14 01:55:07 (1232): Enabling shared directory for VM.
2025-10-14 01:55:08 (1232): Starting VM using VBoxManage interface. (boinc_4f287f5b654765f8, slot#4)
2025-10-14 01:55:15 (1232): Successfully started VM. (PID = '12136')
2025-10-14 01:55:15 (1232): Reporting VM Process ID to BOINC.
2025-10-14 01:55:15 (1232): Guest Log: BIOS: VirtualBox 7.0.6
2025-10-14 01:55:15 (1232): Guest Log: CPUID EDX: 0x178bfbff
2025-10-14 01:55:15 (1232): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-14 01:55:15 (1232): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-14 01:55:15 (1232): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-14 01:55:15 (1232): Detected: Web Application Enabled (http://localhost:53499)
2025-10-14 01:55:15 (1232): Preference change detected
2025-10-14 01:55:15 (1232): Setting CPU throttle for VM. (100%)
2025-10-14 01:55:15 (1232): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-14 01:55:17 (1232): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-14 01:55:17 (1232): Guest Log: BIOS: Booting from Hard Disk...
2025-10-14 01:55:20 (1232): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-14 01:55:20 (1232): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-14 01:55:20 (1232): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-14 01:55:29 (1232): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-14 01:55:29 (1232): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-14 01:55:40 (1232): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-14 01:55:40 (1232): Guest Log: 00:00:00.000231 main     Log opened 2025-10-14T01:55:38.023621000Z
2025-10-14 01:55:40 (1232): Guest Log: 00:00:00.000486 main     OS Product: Linux
2025-10-14 01:55:40 (1232): Guest Log: 00:00:00.000545 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-14 01:55:40 (1232): Guest Log: 00:00:00.000595 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-14 01:55:40 (1232): Guest Log: 00:00:00.000643 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-14 01:55:40 (1232): Guest Log: 00:00:00.000645 main     Process ID: 1370
2025-10-14 01:55:40 (1232): Guest Log: 00:00:00.000647 main     Package type: LINUX_64BITS_GENERIC
2025-10-14 01:55:40 (1232): Guest Log: 00:00:00.001934 main     5.2.32 r132073 started. Verbose level = 0
2025-10-14 01:55:40 (1232): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-14 01:55:40 (1232): Guest Log: [INFO] Mounting shared directory
2025-10-14 01:55:40 (1232): Guest Log: [INFO] Checking for init_data.xml
2025-10-14 01:55:46 (1232): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-14 01:55:46 (1232): Guest Log: [INFO] Detected branch: prod
2025-10-14 01:55:46 (1232): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-14 01:55:46 (1232): Guest Log: Copying input files
2025-10-14 01:55:48 (1232): Guest Log: Copied input files into RunAtlas.
2025-10-14 01:55:48 (1232): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-14 01:55:48 (1232): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-14 01:55:48 (1232): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-14 01:55:48 (1232): Guest Log: Further information can be found at the LHC@home message board.
2025-10-14 01:55:50 (1232): Guest Log: 00:00:10.015281 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 579 799 000ns (GuestNow=1 760 396 149 447 867 000 ns GuestLast=1 760 406 938 027 666 000 ns fSetTimeLastLoop=true )
2025-10-14 01:56:26 (1232): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-14 01:56:26 (1232): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-14 01:56:26 (1232): Guest Log: 2.6.3.0 1649 0 30144 151676 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-14 01:56:27 (1232): Guest Log: copied the webapp to /var/www
2025-10-14 01:56:27 (1232): Guest Log: ATHENA_PROC_NUMBER=8
2025-10-14 01:56:27 (1232): Guest Log: ATHENA_CORE_NUMBER=8
2025-10-14 01:56:27 (1232): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-14 01:56:27 (1232): Guest Log:  *** Starting ATLAS job. (PandaID=6839474938 taskID=46676269) ***
2025-10-14 03:35:19 (1232): Status Report: Elapsed Time: '6000.000000'
2025-10-14 03:35:19 (1232): Status Report: CPU Time: '39382.859375'
2025-10-14 05:15:24 (1232): Status Report: Elapsed Time: '12000.000000'
2025-10-14 05:15:24 (1232): Status Report: CPU Time: '86610.515625'
2025-10-14 06:24:31 (1232): Guest Log:  *** Job finished ***
2025-10-14 06:24:31 (1232): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-14 06:24:31 (1232): Guest Log: 2025-10-14 03:24:02,613 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-14 06:24:31 (1232): Guest Log: 2025-10-14 03:24:02,614 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-14 06:24:31 (1232): Guest Log: 2025-10-14 03:24:23,033 | INFO     | [monitor] cgroup control has ended
2025-10-14 06:24:31 (1232): Guest Log: 2025-10-14 03:24:24,016 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140626230908736)>', '<ExcThread(monitor, started 140625215223552)>']
2025-10-14 06:24:31 (1232): Guest Log: 2025-10-14 03:24:24,923 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-14 06:24:31 (1232): Guest Log: 2025-10-14 03:24:24,924 | INFO     | [monitor] control thread has ended
2025-10-14 06:24:31 (1232): Guest Log: 2025-10-14 03:24:29,020 | INFO     | all workflow threads have been joined
2025-10-14 06:24:31 (1232): Guest Log: 2025-10-14 03:24:29,020 | INFO     | end of generic workflow (traces error code: 0)
2025-10-14 06:24:31 (1232): Guest Log: 2025-10-14 03:24:29,021 | INFO     | traces error code: 0
2025-10-14 06:24:31 (1232): Guest Log: 2025-10-14 03:24:29,021 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-14 06:24:31 (1232): Guest Log: 2025-10-14 03:24:29,158 [wrapper] ==== pilot stdout END ====
2025-10-14 06:24:31 (1232): Guest Log: 2025-10-14 03:24:29,165 [wrapper] ==== wrapper stdout RESUME ====
2025-10-14 06:24:31 (1232): Guest Log: 2025-10-14 03:24:29,172 [wrapper] pilotpid: 6078
2025-10-14 06:24:31 (1232): Guest Log: 2025-10-14 03:24:29,180 [wrapper] Pilot exit status: 0
2025-10-14 06:24:31 (1232): Guest Log: 2025-10-14 03:24:29,439 [wrapper] pandaids: 6839474938
2025-10-14 06:24:31 (1232): Guest Log: 2025-10-14 03:24:29,497 [wrapper] cleanup supervisor_pilot 15016 6079
2025-10-14 06:24:31 (1232): Guest Log: 2025-10-14 03:24:29,504 [wrapper] Test setup, not cleaning
2025-10-14 06:24:31 (1232): Guest Log: 2025-10-14 03:24:29,512 [wrapper] apfmon messages muted
2025-10-14 06:24:31 (1232): Guest Log: 2025-10-14 03:24:29,521 [wrapper] ==== wrapper stdout END ====
2025-10-14 06:24:31 (1232): Guest Log: 2025-10-14 03:24:29,531 [wrapper] ==== wrapper stderr END ====
2025-10-14 06:24:31 (1232): Guest Log:  *** Error codes and diagnostics ***
2025-10-14 06:24:31 (1232): Guest Log:     "exeErrorCode": 0,
2025-10-14 06:24:31 (1232): Guest Log:     "exeErrorDiag": "",
2025-10-14 06:24:31 (1232): Guest Log:     "pilotErrorCode": 0,
2025-10-14 06:24:31 (1232): Guest Log:     "pilotErrorDiag": "",
2025-10-14 06:24:31 (1232): Guest Log:  *** Listing of results directory ***
2025-10-14 06:24:31 (1232): Guest Log: total 198100
2025-10-14 06:24:31 (1232): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 12 04:38 pilot3.tar.gz
2025-10-14 06:24:31 (1232): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 12 05:15 runpilot2-wrapper.sh
2025-10-14 06:24:31 (1232): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 12 05:15 queuedata.json
2025-10-14 06:24:31 (1232): Guest Log: -rwxr-xr-x. 1 atlas atlas      8540 Oct 13 22:55 init_data.xml
2025-10-14 06:24:31 (1232): Guest Log: -rwxr-xr-x. 1 atlas atlas    569674 Oct 13 22:55 input.tar.gz
2025-10-14 06:24:31 (1232): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 13 22:55 start_atlas.sh
2025-10-14 06:24:31 (1232): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 13 22:55 EVNT.46676267._004312.pool.root.1 -> /data/./ATLAS.root_0
2025-10-14 06:24:31 (1232): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 13 22:56 pandaJob.out
2025-10-14 06:24:31 (1232): Guest Log: -rw-------. 1 atlas atlas    972799 Oct 13 22:57 agis_schedconf.cvmfs.json
2025-10-14 06:24:31 (1232): Guest Log: drwx------. 5 atlas atlas      4096 Oct 13 22:57 pilot3
2025-10-14 06:24:31 (1232): Guest Log: -rw-------. 1 atlas atlas 193904650 Oct 14 03:22 HITS.46676269._071696.pool.root.1
2025-10-14 06:24:31 (1232): Guest Log: -rw-------. 1 atlas atlas      1035 Oct 14 03:23 memory_monitor_summary.json
2025-10-14 06:24:31 (1232): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 14 03:23 agis_ddmendpoints.agis.ALL.json
2025-10-14 06:24:31 (1232): Guest Log: -rw-------. 1 atlas atlas    488564 Oct 14 03:23 log.46676269._071696.job.log.tgz.1
2025-10-14 06:24:31 (1232): Guest Log: -rw-------. 1 atlas atlas        95 Oct 14 03:23 pilot_heartbeat.json
2025-10-14 06:24:31 (1232): Guest Log: -rw-------. 1 atlas atlas      7837 Oct 14 03:23 heartbeat.json
2025-10-14 06:24:31 (1232): Guest Log: -rw-------. 1 atlas atlas      4805 Oct 14 03:24 pilotlog.txt
2025-10-14 06:24:31 (1232): Guest Log: -rw-------. 1 atlas atlas   2068445 Oct 14 03:24 log.46676269._071696.job.log.1
2025-10-14 06:24:31 (1232): Guest Log: -rw-------. 1 atlas atlas       357 Oct 14 03:24 output.list
2025-10-14 06:24:31 (1232): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 14 03:24 runtime_log
2025-10-14 06:24:31 (1232): Guest Log: -rw-------. 1 atlas atlas   2580480 Oct 14 03:24 result.tar.gz
2025-10-14 06:24:31 (1232): Guest Log: -rw-------. 1 atlas atlas       659 Oct 14 03:24 xyBNDm4b3R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmQHTMDmKfK2km.diag
2025-10-14 06:24:31 (1232): Guest Log: -rw-r--r--. 1 atlas atlas      8640 Oct 14 03:24 runtime_log.err
2025-10-14 06:24:31 (1232): Guest Log: Looking for outputfile HITS.46676269._071696.pool.root.1
2025-10-14 06:24:31 (1232): Guest Log: HITS file was successfully produced
2025-10-14 06:24:31 (1232): Guest Log: -rw-------. 1 atlas atlas 193904650 Oct 14 03:22 /home/atlas/RunAtlas/HITS.46676269._071696.pool.root.1
2025-10-14 06:24:33 (1232): Guest Log: Successfully finished the ATLAS job!
2025-10-14 06:24:33 (1232): Guest Log: Copying the results back to the shared directory!
2025-10-14 06:24:33 (1232): Guest Log:  *** Contents of shared directory: ***
2025-10-14 06:24:33 (1232): Guest Log: total 408748
2025-10-14 06:24:33 (1232): Guest Log: -rwxrwxrwx. 1 root root 221463393 Oct 13 22:55 ATLAS.root_0
2025-10-14 06:24:33 (1232): Guest Log: -rwxrwxrwx. 1 root root 193904650 Oct 14 03:24 HITS.pool.root.1
2025-10-14 06:24:33 (1232): Guest Log: -rwxrwxrwx. 1 root root      8540 Oct 13 22:55 init_data.xml
2025-10-14 06:24:33 (1232): Guest Log: -rwxrwxrwx. 1 root root    569674 Oct 12 13:17 input.tar.gz
2025-10-14 06:24:33 (1232): Guest Log: -rwxrwxrwx. 1 root root   2580480 Oct 14 03:24 result.tar.gz
2025-10-14 06:24:33 (1232): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct 12 13:17 start_atlas.sh
2025-10-14 06:24:33 (1232): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-14 06:24:33 (1232): VM Completion File Detected.
2025-10-14 06:24:33 (1232): Powering off VM.
2025-10-14 06:24:33 (1232): Successfully stopped VM.
2025-10-14 06:24:33 (1232): Deregistering VM. (boinc_4f287f5b654765f8, slot#4)
2025-10-14 06:24:33 (1232): Removing network bandwidth throttle group from VM.
2025-10-14 06:24:34 (1232): Removing VM from VirtualBox.
2025-10-14 06:24:39 (1232): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN