Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:16:22 (19536): wrapper (7.7.26015): starting
09:16:22 (19536): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 09:16:22] Arguments: --nthreads 12
[2025-10-12 09:16:22] Threads: 12
[2025-10-12 09:16:22] Checking for CVMFS
[2025-10-12 09:16:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:16:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:16:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:16:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:16:23] 2.11.2.0 2914 222930 97328 151621 1 56 15645155 20275201 1 130560 1 108509701 99.983 13256953 12348 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 09:16:23] CVMFS is ok
[2025-10-12 09:16:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:16:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:16:23] Further information can be found at the LHC@home message board.
[2025-10-12 09:16:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:16:23] Checking for apptainer binary...
[2025-10-12 09:16:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:16:23] Running /usr/bin/apptainer --version
[2025-10-12 09:16:23] apptainer version 1.3.2-1.el7
[2025-10-12 09:16:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:16:24] c-205-5.aglt2.org
[2025-10-12 09:16:24] apptainer works
[2025-10-12 09:16:24] Set ATHENA_PROC_NUMBER=12
[2025-10-12 09:16:24] Set ATHENA_CORE_NUMBER=12
[2025-10-12 09:16:24] Starting ATLAS job with PandaID=6839660574
[2025-10-12 09:16:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:29:15]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:29:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 10:29:15]  replicas=None
[2025-10-12 10:29:15]  scope=mc23_13p6TeV
[2025-10-12 10:29:15]  status=None
[2025-10-12 10:29:15]  status_code=0
[2025-10-12 10:29:15]  storage_token=
[2025-10-12 10:29:15]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839660574/log.46676269._074065.job.log.tgz.1
[2025-10-12 10:29:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/21/log.46676269._074065.job.log.tgz.1
[2025-10-12 10:29:15]  workdir=None
[2025-10-12 10:29:15] ]
[2025-10-12 10:29:15] 2025-10-12 14:28:35,453 | INFO     | transferring file log.46676269._074065.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839660574/log.46676269._074065.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 10:29:15] 2025-10-12 14:28:35,453 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839660574/log.46676269._074065.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._074065.job
[2025-10-12 10:29:15] 2025-10-12 14:28:35,477 | INFO     | adding to output.list: log.46676269._074065.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/21/log.46676269._074065.job.log.tg
[2025-10-12 10:29:15] 2025-10-12 14:28:35,478 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 10:29:15] 2025-10-12 14:28:35,479 | INFO     | summary of transferred files:
[2025-10-12 10:29:15] 2025-10-12 14:28:35,479 | INFO     |  -- lfn=log.46676269._074065.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 10:29:15] 2025-10-12 14:28:35,479 | INFO     | stage-out finished correctly
[2025-10-12 10:29:15] 2025-10-12 14:28:35,602 | INFO     | time since job start (4316s) is within the limit (172800.0s)
[2025-10-12 10:29:15] 2025-10-12 14:28:37,614 | INFO     | time since job start (4318s) is within the limit (172800.0s)
[2025-10-12 10:29:15] 2025-10-12 14:28:37,642 | INFO     | monitor loop #323: job 0:6839660574 is in state 'finished'
[2025-10-12 10:29:15] 2025-10-12 14:28:37,642 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:29:15] 2025-10-12 14:28:37,669 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 10:29:15] 2025-10-12 14:28:37,749 | INFO     | job 6839660574 has state=finished
[2025-10-12 10:29:15] 2025-10-12 14:28:37,749 | INFO     | preparing for final server update for job 6839660574 in state='finished'
[2025-10-12 10:29:15] 2025-10-12 14:28:37,750 | INFO     | this job has now completed (state=finished)
[2025-10-12 10:29:15] 2025-10-12 14:28:37,750 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 10:29:15] 2025-10-12 14:28:37,750 | INFO     | log transfer has been attempted: DONE
[2025-10-12 10:29:15] 2025-10-12 14:28:37,750 | INFO     | job 6839660574 has finished - writing final server update
[2025-10-12 10:29:15] 2025-10-12 14:28:37,750 | INFO     | total number of processed events: 400 (read)
[2025-10-12 10:29:15] 2025-10-12 14:28:37,751 | INFO     | executing command: lscpu
[2025-10-12 10:29:15] 2025-10-12 14:28:37,778 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 10:29:15] 2025-10-12 14:28:39,619 | INFO     | time since job start (4320s) is within the limit (172800.0s)
[2025-10-12 10:29:15] 2025-10-12 14:28:40,144 | INFO     | monitor loop #324: job 0:6839660574 is in state 'finished'
[2025-10-12 10:29:15] 2025-10-12 14:28:40,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:29:15] 2025-10-12 14:28:41,625 | INFO     | time since job start (4322s) is within the limit (172800.0s)
[2025-10-12 10:29:15] 2025-10-12 14:28:42,526 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 10:29:15] 2025-10-12 14:28:42,529 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-12 10:29:15] 2025-10-12 14:28:42,532 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839660574/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 10:29:15] 2025-10-12 14:28:42,533 | INFO     | extracted standard info from prmon json
[2025-10-12 10:29:15] 2025-10-12 14:28:42,533 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:29:15] 2025-10-12 14:28:42,533 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:29:15] 2025-10-12 14:28:42,533 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:29:15] 2025-10-12 14:28:42,533 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:29:15] 2025-10-12 14:28:42,535 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:29:15] 2025-10-12 14:28:42,536 | INFO     | sum of square deviations: 81266640.0
[2025-10-12 10:29:15] 2025-10-12 14:28:42,536 | INFO     | sum of deviations: -6546680521.5
[2025-10-12 10:29:15] 2025-10-12 14:28:42,536 | INFO     | mean x: 1760277253.5
[2025-10-12 10:29:15] 2025-10-12 14:28:42,536 | INFO     | mean y: 2866420.015625
[2025-10-12 10:29:15] 2025-10-12 14:28:42,537 | INFO     | -- intersect: 141807336346.765
[2025-10-12 10:29:15] 2025-10-12 14:28:42,537 | INFO     | intersect: 141807336346.765
[2025-10-12 10:29:15] 2025-10-12 14:28:42,537 | INFO     | chi2: 0.058252671643010144
[2025-10-12 10:29:15] 2025-10-12 14:28:42,537 | INFO     | -- intersect: 141807336346.765
[2025-10-12 10:29:15] 2025-10-12 14:28:42,537 | INFO     | current memory leak: -80.56 B/s (using 64 data points, chi2=0.06)
[2025-10-12 10:29:15] 2025-10-12 14:28:42,538 | INFO     | could have reported an average CPU frequency of 2084 MHz (6 samples)
[2025-10-12 10:29:15] 2025-10-12 14:28:42,538 | INFO     | ..............................
[2025-10-12 10:29:15] 2025-10-12 14:28:42,538 | INFO     | . Timing measurements:
[2025-10-12 10:29:15] 2025-10-12 14:28:42,538 | INFO     | . get job = 0 s
[2025-10-12 10:29:15] 2025-10-12 14:28:42,538 | INFO     | . initial setup = 2 s
[2025-10-12 10:29:15] 2025-10-12 14:28:42,538 | INFO     | . payload setup = 6 s
[2025-10-12 10:29:15] 2025-10-12 14:28:42,539 | INFO     | . stage-in = 0 s
[2025-10-12 10:29:15] 2025-10-12 14:28:42,539 | INFO     | . payload execution = 4288 s
[2025-10-12 10:29:15] 2025-10-12 14:28:42,539 | INFO     | . stage-out = 0 s
[2025-10-12 10:29:15] 2025-10-12 14:28:42,539 | INFO     | . log creation = 0 s
[2025-10-12 10:29:15] 2025-10-12 14:28:42,539 | INFO     | ..............................
[2025-10-12 10:29:15] 2025-10-12 14:28:42,984 | INFO     | 
[2025-10-12 10:29:15] 2025-10-12 14:28:42,984 | INFO     | job summary report
[2025-10-12 10:29:15] 2025-10-12 14:28:42,984 | INFO     | --------------------------------------------------
[2025-10-12 10:29:15] 2025-10-12 14:28:42,984 | INFO     | PanDA job id: 6839660574
[2025-10-12 10:29:15] 2025-10-12 14:28:42,985 | INFO     | task id: 46676269
[2025-10-12 10:29:15] 2025-10-12 14:28:42,985 | INFO     | errors: (none)
[2025-10-12 10:29:15] 2025-10-12 14:28:42,985 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:29:15] 2025-10-12 14:28:42,985 | INFO     | pilot state: finished 
[2025-10-12 10:29:15] 2025-10-12 14:28:42,985 | INFO     | transexitcode: 0
[2025-10-12 10:29:15] 2025-10-12 14:28:42,985 | INFO     | exeerrorcode: 0
[2025-10-12 10:29:15] 2025-10-12 14:28:42,986 | INFO     | exeerrordiag: 
[2025-10-12 10:29:15] 2025-10-12 14:28:42,986 | INFO     | exitcode: 0
[2025-10-12 10:29:15] 2025-10-12 14:28:42,986 | INFO     | exitmsg: OK
[2025-10-12 10:29:15] 2025-10-12 14:28:42,986 | INFO     | cpuconsumptiontime: 46375 s
[2025-10-12 10:29:15] 2025-10-12 14:28:42,986 | INFO     | nevents: 400
[2025-10-12 10:29:15] 2025-10-12 14:28:42,986 | INFO     | neventsw: 0
[2025-10-12 10:29:15] 2025-10-12 14:28:42,986 | INFO     | pid: 29826
[2025-10-12 10:29:15] 2025-10-12 14:28:42,987 | INFO     | pgrp: 29826
[2025-10-12 10:29:15] 2025-10-12 14:28:42,987 | INFO     | corecount: 12
[2025-10-12 10:29:15] 2025-10-12 14:28:42,987 | INFO     | event service: False
[2025-10-12 10:29:15] 2025-10-12 14:28:42,987 | INFO     | sizes: {0: 2348854, 5: 2349116, 11: 2349172, 4297: 2375142, 4298: 2375141, 4300: 2384195, 4302: 2384379, 4307: 2384573}
[2025-10-12 10:29:15] 2025-10-12 14:28:42,987 | INFO     | --------------------------------------------------
[2025-10-12 10:29:15] 2025-10-12 14:28:42,987 | INFO     | 
[2025-10-12 10:29:15] 2025-10-12 14:28:42,987 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 10:29:15] 2025-10-12 14:28:43,013 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:29:15] 2025-10-12 14:28:43,014 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:29:15] 2025-10-12 14:28:43,014 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:29:15] 2025-10-12 14:28:43,014 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:29:15] 2025-10-12 14:28:43,014 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:29:15] 2025-10-12 14:28:43,014 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:29:15] 2025-10-12 14:28:43,014 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:29:15] 2025-10-12 14:28:43,015 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:29:15] 2025-10-12 14:28:43,015 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:29:15] 2025-10-12 14:28:43,015 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:29:15] 2025-10-12 14:28:43,015 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:29:15] 2025-10-12 14:28:43,015 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:29:15] 2025-10-12 14:28:43,015 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:29:15] 2025-10-12 14:28:43,016 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:29:15] 2025-10-12 14:28:43,016 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:29:15] 2025-10-12 14:28:43,016 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:29:15] 2025-10-12 14:28:43,016 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:29:15] 2025-10-12 14:28:43,016 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:29:15] 2025-10-12 14:28:43,016 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:29:15] 2025-10-12 14:28:43,017 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:29:15] 2025-10-12 14:28:43,017 | INFO     | job 6839660574 has completed (purged errors)
[2025-10-12 10:29:15] 2025-10-12 14:28:43,017 | INFO     | overall cleanup function is called
[2025-10-12 10:29:15] 2025-10-12 14:28:44,025 | INFO     | --- collectZombieJob: --- 10, [29826]
[2025-10-12 10:29:15] 2025-10-12 14:28:44,025 | INFO     | zombie collector waiting for pid 29826
[2025-10-12 10:29:15] 2025-10-12 14:28:44,025 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:29:15] 2025-10-12 14:28:44,026 | INFO     | collected zombie processes
[2025-10-12 10:29:15] 2025-10-12 14:28:44,026 | INFO     | will attempt to kill all subprocesses of pid=29826
[2025-10-12 10:29:15] 2025-10-12 14:28:44,115 | INFO     | process IDs to be killed: [29826] (in reverse order)
[2025-10-12 10:29:15] 2025-10-12 14:28:44,168 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:29:15] 2025-10-12 14:28:44,168 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:29:15] 2025-10-12 14:28:44,172 | INFO     | did not find any defunct processes belonging to 29826
[2025-10-12 10:29:15] 2025-10-12 14:28:44,176 | INFO     | did not find any defunct processes belonging to 29826
[2025-10-12 10:29:15] 2025-10-12 14:28:44,176 | INFO     | ready for new job
[2025-10-12 10:29:15] 2025-10-12 14:28:44,176 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:29:15] 2025-10-12 14:28:44,178 | INFO     | ***************************************
[2025-10-12 10:29:15] 2025-10-12 14:28:44,178 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:29:15] 2025-10-12 14:28:44,178 | INFO     | ***************************************
[2025-10-12 10:29:15] 2025-10-12 14:28:44,178 | INFO     | 
[2025-10-12 10:29:15] 2025-10-12 14:28:44,179 | INFO     | architecture information:
[2025-10-12 10:29:15] 2025-10-12 14:28:44,179 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:29:15] 2025-10-12 14:28:44,194 | INFO     | cat /etc/os-release:
[2025-10-12 10:29:15] NAME="CentOS Linux"
[2025-10-12 10:29:15] VERSION="7 (Core)"
[2025-10-12 10:29:15] ID="centos"
[2025-10-12 10:29:15] ID_LIKE="rhel fedora"
[2025-10-12 10:29:15] VERSION_ID="7"
[2025-10-12 10:29:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:29:15] ANSI_COLOR="0;31"
[2025-10-12 10:29:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:29:15] HOME_URL="https://www.centos.org/"
[2025-10-12 10:29:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:29:15] 
[2025-10-12 10:29:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:29:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:29:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:29:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:29:15] 
[2025-10-12 10:29:15] 2025-10-12 14:28:44,194 | INFO     | ***************************************
[2025-10-12 10:29:15] 2025-10-12 14:28:44,697 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 10:29:15] 2025-10-12 14:28:44,715 | INFO     | sufficient remaining disk space (29358030848 B)
[2025-10-12 10:29:15] 2025-10-12 14:28:44,715 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:29:15] 2025-10-12 14:28:44,715 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:29:15] 2025-10-12 14:28:44,715 | INFO     | update_server=False
[2025-10-12 10:29:15] 2025-10-12 14:28:44,716 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:29:15] 2025-10-12 14:28:44,716 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:29:15] 2025-10-12 14:28:44,830 | INFO     | all job control threads have been joined
[2025-10-12 10:29:15] 2025-10-12 14:28:45,148 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 10:29:15] 2025-10-12 14:28:45,148 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 10:29:15] 2025-10-12 14:28:45,148 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:29:15] 2025-10-12 14:28:45,149 | INFO     | will abort loop
[2025-10-12 10:29:15] 2025-10-12 14:28:45,291 | INFO     | all payload control threads have been joined
[2025-10-12 10:29:15] 2025-10-12 14:28:45,478 | INFO     | all data control threads have been joined
[2025-10-12 10:29:15] 2025-10-12 14:28:45,721 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:29:15] 2025-10-12 14:28:45,833 | INFO     | [job] control thread has finished
[2025-10-12 10:29:15] 2025-10-12 14:28:45,926 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:29:15] 2025-10-12 14:28:45,957 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:29:15] 2025-10-12 14:28:46,014 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:29:15] 2025-10-12 14:28:46,023 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:29:15] 2025-10-12 14:28:46,078 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:29:15] 2025-10-12 14:28:46,154 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:29:15] 2025-10-12 14:28:46,296 | INFO     | [payload] control thread has finished
[2025-10-12 10:29:15] 2025-10-12 14:28:46,312 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:29:15] 2025-10-12 14:28:46,484 | INFO     | [data] control thread has finished
[2025-10-12 10:29:15] 2025-10-12 14:28:46,675 | INFO     | [job] validate thread has finished
[2025-10-12 10:29:15] 2025-10-12 14:28:47,006 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:29:15] 2025-10-12 14:28:47,024 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:29:15] 2025-10-12 14:28:47,086 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:29:15] 2025-10-12 14:28:47,626 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:29:15] 2025-10-12 14:28:48,083 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:29:15] 2025-10-12 14:28:48,631 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:29:15] 2025-10-12 14:28:48,722 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:29:15] 2025-10-12 14:28:49,544 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139921913292608)>', '<ExcThread(monitor, started 139920941233920)>']
[2025-10-12 10:29:15] 2025-10-12 14:28:54,549 | INFO     | all workflow threads have been joined
[2025-10-12 10:29:15] 2025-10-12 14:28:54,549 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:29:15] 2025-10-12 14:28:54,550 | INFO     | traces error code: 0
[2025-10-12 10:29:15] 2025-10-12 14:28:54,550 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:29:15] 2025-10-12 14:29:14,814 | INFO     | PID=23206 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 10:29:15] 2025-10-12 14:29:14,815 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:29:15] 2025-10-12 14:29:14,815 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:29:15] 2025-10-12 14:29:14,815 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:29:15] 2025-10-12 14:29:14,815 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:29:15] 2025-10-12 14:29:14,815 | INFO     | [monitor] control thread has ended
[2025-10-12 10:29:15] 2025-10-12 14:29:14,902 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:29:15] 2025-10-12 14:29:14,906 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:29:15] 2025-10-12 14:29:14,909 [wrapper] pilotpid: 23206
[2025-10-12 10:29:15] 2025-10-12 14:29:14,913 [wrapper] Pilot exit status: 0
[2025-10-12 10:29:15] 2025-10-12 14:29:14,928 [wrapper] pandaids: 6839660574
[2025-10-12 10:29:15] 2025-10-12 14:29:14,971 [wrapper] cleanup supervisor_pilot  2377 23207
[2025-10-12 10:29:15] 2025-10-12 14:29:14,975 [wrapper] Test setup, not cleaning
[2025-10-12 10:29:15] 2025-10-12 14:29:14,979 [wrapper] apfmon messages muted
[2025-10-12 10:29:15] 2025-10-12 14:29:14,982 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:29:15] 2025-10-12 14:29:14,986 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:29:15]  *** Error codes and diagnostics ***
[2025-10-12 10:29:15]     "exeErrorCode": 0,
[2025-10-12 10:29:15]     "exeErrorDiag": "",
[2025-10-12 10:29:15]     "pilotErrorCode": 0,
[2025-10-12 10:29:15]     "pilotErrorDiag": "",
[2025-10-12 10:29:15]  *** Listing of results directory ***
[2025-10-12 10:29:15] total 412848
[2025-10-12 10:29:15] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 03:58 pilot3.tar.gz
[2025-10-12 10:29:15] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 03:58 queuedata.json
[2025-10-12 10:29:15] -rwx------ 1 boincer umatlas     36292 Oct 12 03:59 runpilot2-wrapper.sh
[2025-10-12 10:29:15] -rw-r--r-- 1 boincer umatlas       100 Oct 12 09:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:29:15] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 09:16 run_atlas
[2025-10-12 10:29:15] -rw-r--r-- 1 boincer umatlas       105 Oct 12 09:16 job.xml
[2025-10-12 10:29:15] -rw-r--r-- 2 boincer umatlas 222685196 Oct 12 09:16 EVNT.46676267._003525.pool.root.1
[2025-10-12 10:29:15] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:16 start_atlas.sh
[2025-10-12 10:29:15] drwxrwx--x 2 boincer umatlas      4096 Oct 12 09:16 shared
[2025-10-12 10:29:15] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 09:16 input.tar.gz
[2025-10-12 10:29:15] -rw-r--r-- 1 boincer umatlas         0 Oct 12 09:16 boinc_lockfile
[2025-10-12 10:29:15] -rw-r--r-- 1 boincer umatlas      2548 Oct 12 09:16 pandaJob.out
[2025-10-12 10:29:15] -rw------- 1 boincer umatlas    975528 Oct 12 09:16 agis_schedconf.cvmfs.json
[2025-10-12 10:29:15] -rw------- 1 boincer umatlas   1560580 Oct 12 09:16 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:29:15] drwx------ 5 boincer umatlas      4096 Oct 12 09:16 pilot3
[2025-10-12 10:29:15] -rw-r--r-- 1 boincer umatlas       529 Oct 12 10:28 boinc_task_state.xml
[2025-10-12 10:29:15] -rw------- 1 boincer umatlas 194184579 Oct 12 10:28 HITS.46676269._074065.pool.root.1
[2025-10-12 10:29:15] -rw-r--r-- 1 boincer umatlas      5952 Oct 12 10:28 init_data.xml
[2025-10-12 10:29:15] -rw------- 1 boincer umatlas      1050 Oct 12 10:28 memory_monitor_summary.json
[2025-10-12 10:29:15] -rw------- 1 boincer umatlas    366645 Oct 12 10:28 log.46676269._074065.job.log.tgz.1
[2025-10-12 10:29:15] -rw------- 1 boincer umatlas        95 Oct 12 10:28 pilot_heartbeat.json
[2025-10-12 10:29:15] -rw------- 1 boincer umatlas      7858 Oct 12 10:28 heartbeat.json
[2025-10-12 10:29:15] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 10:29 boinc_mmap_file
[2025-10-12 10:29:15] -rw-r--r-- 1 boincer umatlas        27 Oct 12 10:29 wrapper_checkpoint.txt
[2025-10-12 10:29:15] -rw------- 1 boincer umatlas       745 Oct 12 10:29 pilotlog.txt
[2025-10-12 10:29:15] -rw------- 1 boincer umatlas    629576 Oct 12 10:29 log.46676269._074065.job.log.1
[2025-10-12 10:29:15] -rw------- 1 boincer umatlas       357 Oct 12 10:29 output.list
[2025-10-12 10:29:15] -rw-r--r-- 1 boincer umatlas       620 Oct 12 10:29 runtime_log
[2025-10-12 10:29:15] -rw------- 1 boincer umatlas   1013760 Oct 12 10:29 result.tar.gz
[2025-10-12 10:29:15] -rw------- 1 boincer umatlas       658 Oct 12 10:29 VLIODmhA6R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmOUTMDmMqZUGn.diag
[2025-10-12 10:29:15] -rw-r--r-- 1 boincer umatlas      8700 Oct 12 10:29 runtime_log.err
[2025-10-12 10:29:15] -rw-r--r-- 1 boincer umatlas     21852 Oct 12 10:29 stderr.txt
[2025-10-12 10:29:15] HITS file was successfully produced:
[2025-10-12 10:29:15] -rw------- 1 boincer umatlas 194184579 Oct 12 10:28 shared/HITS.pool.root.1
[2025-10-12 10:29:15]  *** Contents of shared directory: ***
[2025-10-12 10:29:15] total 408672
[2025-10-12 10:29:15] -rw-r--r-- 2 boincer umatlas 222685196 Oct 12 09:16 ATLAS.root_0
[2025-10-12 10:29:15] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:16 start_atlas.sh
[2025-10-12 10:29:15] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 09:16 input.tar.gz
[2025-10-12 10:29:15] -rw------- 1 boincer umatlas 194184579 Oct 12 10:28 HITS.pool.root.1
[2025-10-12 10:29:15] -rw------- 1 boincer umatlas   1013760 Oct 12 10:29 result.tar.gz
10:29:16 (19536): run_atlas exited; CPU time 46359.466460
10:29:16 (19536): called boinc_finish(0)

</stderr_txt>
]]>

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