Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:35:58 (967048): wrapper (7.7.26015): starting
16:35:58 (967048): wrapper: running run_atlas (--nthreads 10)
[2025-10-12 16:35:58] Arguments: --nthreads 10
[2025-10-12 16:35:58] Threads: 10
[2025-10-12 16:35:58] Checking for CVMFS
[2025-10-12 16:35:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 16:35:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 16:35:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 16:36:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 16:36:01] 2.13.2.0 4308 16179 162340 151636 3 135 20974059 39288833 8626 16776704 0 14978660 99.734 8985370 30325 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 16:36:01] CVMFS is ok
[2025-10-12 16:36:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 16:36:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 16:36:01] Further information can be found at the LHC@home message board.
[2025-10-12 16:36:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 16:36:01] Checking for apptainer binary...
[2025-10-12 16:36:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 16:36:01] Running /usr/bin/apptainer --version
[2025-10-12 16:36:02] apptainer version 1.4.3-1.el9
[2025-10-12 16:36:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 16:36:04] c-211-32.aglt2.org
[2025-10-12 16:36:04] apptainer works
[2025-10-12 16:36:04] Set ATHENA_PROC_NUMBER=10
[2025-10-12 16:36:04] Set ATHENA_CORE_NUMBER=10
[2025-10-12 16:36:04] Starting ATLAS job with PandaID=6839774617
[2025-10-12 16:36:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:53:06]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:53:06] 2025-10-13 09:52:22,485 | INFO     | sum of square deviations: 146022442513.1365
[2025-10-13 05:53:06] 2025-10-13 09:52:22,528 | INFO     | sum of deviations: 16095350601.632416
[2025-10-13 05:53:06] 2025-10-13 09:52:22,528 | INFO     | mean x: 1760325330.7249358
[2025-10-13 05:53:06] 2025-10-13 09:52:22,528 | INFO     | mean y: 2612296.14781491
[2025-10-13 05:53:06] 2025-10-13 09:52:22,529 | INFO     | -- intersect: -191419887.42152563
[2025-10-13 05:53:06] 2025-10-13 09:52:22,529 | INFO     | intersect: -191419887.42152563
[2025-10-13 05:53:06] 2025-10-13 09:52:22,530 | INFO     | chi2: 3.2099557226176385
[2025-10-13 05:53:06] 2025-10-13 09:52:22,531 | INFO     | sum of square deviations: 143225462118.0855
[2025-10-13 05:53:06] 2025-10-13 09:52:22,571 | INFO     | sum of deviations: 71881701344.95604
[2025-10-13 05:53:06] 2025-10-13 09:52:22,572 | INFO     | mean x: 1760325178.232859
[2025-10-13 05:53:06] 2025-10-13 09:52:22,572 | INFO     | mean y: 2615321.789133247
[2025-10-13 05:53:06] 2025-10-13 09:52:22,572 | INFO     | -- intersect: -880853070.3562248
[2025-10-13 05:53:06] 2025-10-13 09:52:22,572 | INFO     | intersect: -880853070.3562248
[2025-10-13 05:53:06] 2025-10-13 09:52:22,576 | INFO     | chi2: 2.3876133746870267
[2025-10-13 05:53:06] 2025-10-13 09:52:22,576 | INFO     | current chi2=2.3876133746870267 (change=25.618495050767 %)
[2025-10-13 05:53:06] 2025-10-13 09:52:22,578 | INFO     | sum of square deviations: 140464435885.43637
[2025-10-13 05:53:06] 2025-10-13 09:52:22,611 | INFO     | sum of deviations: 71121492868.61464
[2025-10-13 05:53:06] 2025-10-13 09:52:22,611 | INFO     | mean x: 1760325025.7408855
[2025-10-13 05:53:06] 2025-10-13 09:52:22,611 | INFO     | mean y: 2615279.8020833335
[2025-10-13 05:53:06] 2025-10-13 09:52:22,616 | INFO     | -- intersect: -888691782.9108273
[2025-10-13 05:53:06] 2025-10-13 09:52:22,616 | INFO     | intersect: -888691782.9108273
[2025-10-13 05:53:06] 2025-10-13 09:52:22,617 | INFO     | chi2: 2.387717581882436
[2025-10-13 05:53:06] 2025-10-13 09:52:22,618 | INFO     | current chi2=2.387717581882436 (change=-0.004364492028480776 %)
[2025-10-13 05:53:06] 2025-10-13 09:52:22,618 | INFO     | right removable region: 767
[2025-10-13 05:53:06] 2025-10-13 09:52:22,619 | INFO     | sum of square deviations: 143224975585.01175
[2025-10-13 05:53:06] 2025-10-13 09:52:22,647 | INFO     | time since job start (47694s) is within the limit (172800.0s)
[2025-10-13 05:53:06] 2025-10-13 09:52:22,653 | INFO     | sum of deviations: -167344275225.7672
[2025-10-13 05:53:06] 2025-10-13 09:52:22,653 | INFO     | mean x: 1760325483.2302716
[2025-10-13 05:53:06] 2025-10-13 09:52:22,654 | INFO     | mean y: 2622279.6054333765
[2025-10-13 05:53:06] 2025-10-13 09:52:22,654 | INFO     | -- intersect: 2059389201.3618202
[2025-10-13 05:53:06] 2025-10-13 09:52:22,654 | INFO     | intersect: 2059389201.3618202
[2025-10-13 05:53:06] 2025-10-13 09:52:22,660 | INFO     | chi2: 1.0425391061028066
[2025-10-13 05:53:06] 2025-10-13 09:52:22,661 | INFO     | current chi2=1.0425391061028066 (change=67.52169823536875 %)
[2025-10-13 05:53:06] 2025-10-13 09:52:22,662 | INFO     | sum of square deviations: 140463462575.3422
[2025-10-13 05:53:06] 2025-10-13 09:52:22,670 | INFO     | monitor loop #2813: job 0:6839774617 is in state 'finished'
[2025-10-13 05:53:06] 2025-10-13 09:52:22,670 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:53:06] 2025-10-13 09:52:22,691 | INFO     | sum of deviations: -156484292890.45822
[2025-10-13 05:53:06] 2025-10-13 09:52:22,692 | INFO     | mean x: 1760325635.735677
[2025-10-13 05:53:06] 2025-10-13 09:52:22,692 | INFO     | mean y: 2621673.9583333335
[2025-10-13 05:53:06] 2025-10-13 09:52:22,692 | INFO     | -- intersect: 1963724634.9314756
[2025-10-13 05:53:06] 2025-10-13 09:52:22,692 | INFO     | intersect: 1963724634.9314756
[2025-10-13 05:53:06] 2025-10-13 09:52:22,694 | INFO     | chi2: 0.9925517835002302
[2025-10-13 05:53:06] 2025-10-13 09:52:22,694 | INFO     | current chi2=0.9925517835002302 (change=4.794767151655133 %)
[2025-10-13 05:53:06] 2025-10-13 09:52:22,694 | INFO     | left removable region: 20
[2025-10-13 05:53:06] 2025-10-13 09:52:22,695 | INFO     | sum of square deviations: 129253959998.18701
[2025-10-13 05:53:06] 2025-10-13 09:52:22,713 | INFO     | sum of deviations: -47831841276.97192
[2025-10-13 05:53:06] 2025-10-13 09:52:22,713 | INFO     | mean x: 1760325605.2503347
[2025-10-13 05:53:06] 2025-10-13 09:52:22,713 | INFO     | mean y: 2621812.887550201
[2025-10-13 05:53:06] 2025-10-13 09:52:22,713 | INFO     | -- intersect: 654049552.1019199
[2025-10-13 05:53:06] 2025-10-13 09:52:22,714 | INFO     | intersect: 654049552.1019199
[2025-10-13 05:53:06] 2025-10-13 09:52:22,715 | INFO     | chi2: 0.08797166528610394
[2025-10-13 05:53:06] 2025-10-13 09:52:22,715 | INFO     | -- intersect: 654049552.1019199
[2025-10-13 05:53:06] 2025-10-13 09:52:22,715 | INFO     | current memory leak: -0.37 B/s (using 747 data points, chi2=0.09)
[2025-10-13 05:53:06] 2025-10-13 09:52:22,718 | INFO     | could have reported an average CPU frequency of 2899 MHz (29 samples)
[2025-10-13 05:53:06] 2025-10-13 09:52:22,718 | INFO     | ..............................
[2025-10-13 05:53:06] 2025-10-13 09:52:22,718 | INFO     | . Timing measurements:
[2025-10-13 05:53:06] 2025-10-13 09:52:22,718 | INFO     | . get job = 0 s
[2025-10-13 05:53:06] 2025-10-13 09:52:22,718 | INFO     | . initial setup = 5 s
[2025-10-13 05:53:06] 2025-10-13 09:52:22,719 | INFO     | . payload setup = 56 s
[2025-10-13 05:53:06] 2025-10-13 09:52:22,719 | INFO     | . stage-in = 0 s
[2025-10-13 05:53:06] 2025-10-13 09:52:22,719 | INFO     | . payload execution = 47493 s
[2025-10-13 05:53:06] 2025-10-13 09:52:22,719 | INFO     | . stage-out = 5 s
[2025-10-13 05:53:06] 2025-10-13 09:52:22,719 | INFO     | . log creation = 1 s
[2025-10-13 05:53:06] 2025-10-13 09:52:22,719 | INFO     | ..............................
[2025-10-13 05:53:06] 2025-10-13 09:52:22,867 | INFO     | 
[2025-10-13 05:53:06] 2025-10-13 09:52:22,867 | INFO     | job summary report
[2025-10-13 05:53:06] 2025-10-13 09:52:22,867 | INFO     | --------------------------------------------------
[2025-10-13 05:53:06] 2025-10-13 09:52:22,868 | INFO     | PanDA job id: 6839774617
[2025-10-13 05:53:06] 2025-10-13 09:52:22,868 | INFO     | task id: 46676269
[2025-10-13 05:53:06] 2025-10-13 09:52:22,868 | INFO     | errors: (none)
[2025-10-13 05:53:06] 2025-10-13 09:52:22,868 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:53:06] 2025-10-13 09:52:22,868 | INFO     | pilot state: finished 
[2025-10-13 05:53:06] 2025-10-13 09:52:22,868 | INFO     | transexitcode: 0
[2025-10-13 05:53:06] 2025-10-13 09:52:22,869 | INFO     | exeerrorcode: 0
[2025-10-13 05:53:06] 2025-10-13 09:52:22,869 | INFO     | exeerrordiag: 
[2025-10-13 05:53:06] 2025-10-13 09:52:22,869 | INFO     | exitcode: 0
[2025-10-13 05:53:06] 2025-10-13 09:52:22,869 | INFO     | exitmsg: OK
[2025-10-13 05:53:06] 2025-10-13 09:52:22,869 | INFO     | cpuconsumptiontime: 78315 s
[2025-10-13 05:53:06] 2025-10-13 09:52:22,869 | INFO     | nevents: 400
[2025-10-13 05:53:06] 2025-10-13 09:52:22,869 | INFO     | neventsw: 0
[2025-10-13 05:53:06] 2025-10-13 09:52:22,870 | INFO     | pid: 978541
[2025-10-13 05:53:06] 2025-10-13 09:52:22,870 | INFO     | pgrp: 978541
[2025-10-13 05:53:06] 2025-10-13 09:52:22,870 | INFO     | corecount: 10
[2025-10-13 05:53:06] 2025-10-13 09:52:22,870 | INFO     | event service: False
[2025-10-13 05:53:06] 2025-10-13 09:52:22,870 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348913, 3: 2348941, 14: 2348941, 25: 2348969, 36: 2349125, 47: 2349471, 47553: 2395021, 47554: 2395020, 47561: 2404074, 47564: 
[2025-10-13 05:53:06] 2025-10-13 09:52:22,870 | INFO     | --------------------------------------------------
[2025-10-13 05:53:06] 2025-10-13 09:52:22,870 | INFO     | 
[2025-10-13 05:53:06] 2025-10-13 09:52:22,871 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 05:53:06] 2025-10-13 09:52:22,973 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:53:06] 2025-10-13 09:52:22,973 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:53:06] 2025-10-13 09:52:22,974 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:53:06] 2025-10-13 09:52:22,974 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:53:06] 2025-10-13 09:52:22,974 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:53:06] 2025-10-13 09:52:22,974 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:53:06] 2025-10-13 09:52:22,974 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:53:06] 2025-10-13 09:52:22,975 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:53:06] 2025-10-13 09:52:22,975 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:53:06] 2025-10-13 09:52:22,975 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:53:06] 2025-10-13 09:52:22,975 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:53:06] 2025-10-13 09:52:22,975 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:53:06] 2025-10-13 09:52:22,975 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:53:06] 2025-10-13 09:52:22,976 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:53:06] 2025-10-13 09:52:22,976 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:53:06] 2025-10-13 09:52:22,976 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:53:06] 2025-10-13 09:52:22,976 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:53:06] 2025-10-13 09:52:22,976 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:53:06] 2025-10-13 09:52:23,029 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:53:06] 2025-10-13 09:52:23,029 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:53:06] 2025-10-13 09:52:23,029 | INFO     | job 6839774617 has completed (purged errors)
[2025-10-13 05:53:06] 2025-10-13 09:52:23,029 | INFO     | overall cleanup function is called
[2025-10-13 05:53:06] 2025-10-13 09:52:24,043 | INFO     | --- collectZombieJob: --- 10, [978541]
[2025-10-13 05:53:06] 2025-10-13 09:52:24,043 | INFO     | zombie collector waiting for pid 978541
[2025-10-13 05:53:06] 2025-10-13 09:52:24,043 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:53:06] 2025-10-13 09:52:24,043 | INFO     | collected zombie processes
[2025-10-13 05:53:06] 2025-10-13 09:52:24,044 | INFO     | will attempt to kill all subprocesses of pid=978541
[2025-10-13 05:53:06] 2025-10-13 09:52:25,029 | INFO     | process IDs to be killed: [978541] (in reverse order)
[2025-10-13 05:53:06] 2025-10-13 09:52:25,260 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:53:06] 2025-10-13 09:52:25,260 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:53:06] 2025-10-13 09:52:25,285 | INFO     | did not find any defunct processes belonging to 978541
[2025-10-13 05:53:06] 2025-10-13 09:52:25,310 | INFO     | did not find any defunct processes belonging to 978541
[2025-10-13 05:53:06] 2025-10-13 09:52:25,310 | INFO     | ready for new job
[2025-10-13 05:53:06] 2025-10-13 09:52:25,315 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:53:06] 2025-10-13 09:52:25,323 | INFO     | ***************************************
[2025-10-13 05:53:06] 2025-10-13 09:52:25,323 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:53:06] 2025-10-13 09:52:25,324 | INFO     | ***************************************
[2025-10-13 05:53:06] 2025-10-13 09:52:25,324 | INFO     | 
[2025-10-13 05:53:06] 2025-10-13 09:52:25,326 | INFO     | architecture information:
[2025-10-13 05:53:06] 2025-10-13 09:52:25,330 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:53:06] 2025-10-13 09:52:25,384 | INFO     | cat /etc/os-release:
[2025-10-13 05:53:06] NAME="CentOS Linux"
[2025-10-13 05:53:06] VERSION="7 (Core)"
[2025-10-13 05:53:06] ID="centos"
[2025-10-13 05:53:06] ID_LIKE="rhel fedora"
[2025-10-13 05:53:06] VERSION_ID="7"
[2025-10-13 05:53:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:53:06] ANSI_COLOR="0;31"
[2025-10-13 05:53:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:53:06] HOME_URL="https://www.centos.org/"
[2025-10-13 05:53:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:53:06] 
[2025-10-13 05:53:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:53:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:53:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:53:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:53:06] 
[2025-10-13 05:53:06] 2025-10-13 09:52:25,385 | INFO     | ***************************************
[2025-10-13 05:53:06] 2025-10-13 09:52:25,889 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 05:53:06] 2025-10-13 09:52:25,988 | INFO     | sufficient remaining disk space (52540997632 B)
[2025-10-13 05:53:06] 2025-10-13 09:52:25,989 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:53:06] 2025-10-13 09:52:25,989 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:53:06] 2025-10-13 09:52:25,989 | INFO     | update_server=False
[2025-10-13 05:53:06] 2025-10-13 09:52:25,989 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:53:06] 2025-10-13 09:52:25,991 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:53:06] 2025-10-13 09:52:26,187 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:53:06] 2025-10-13 09:52:26,187 | INFO     | aborting loop
[2025-10-13 05:53:06] 2025-10-13 09:52:26,680 | INFO     | all data control threads have been joined
[2025-10-13 05:53:06] 2025-10-13 09:52:26,860 | INFO     | all job control threads have been joined
[2025-10-13 05:53:06] 2025-10-13 09:52:26,903 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:53:06] 2025-10-13 09:52:26,997 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:53:06] 2025-10-13 09:52:27,026 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:53:06] 2025-10-13 09:52:27,165 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:53:06] 2025-10-13 09:52:27,201 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:53:06] 2025-10-13 09:52:27,223 | INFO     | all payload control threads have been joined
[2025-10-13 05:53:06] 2025-10-13 09:52:27,578 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:53:06] 2025-10-13 09:52:27,591 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:53:06] 2025-10-13 09:52:27,624 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:53:06] 2025-10-13 09:52:27,686 | INFO     | [data] control thread has finished
[2025-10-13 05:53:06] 2025-10-13 09:52:27,866 | INFO     | [job] control thread has finished
[2025-10-13 05:53:06] 2025-10-13 09:52:27,886 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:53:06] 2025-10-13 09:52:27,946 | INFO     | [job] validate thread has finished
[2025-10-13 05:53:06] 2025-10-13 09:52:28,143 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:53:06] 2025-10-13 09:52:28,229 | INFO     | [payload] control thread has finished
[2025-10-13 05:53:06] 2025-10-13 09:52:28,617 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:53:06] 2025-10-13 09:52:28,923 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:53:06] 2025-10-13 09:52:28,923 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:53:06] 2025-10-13 09:52:30,075 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:53:06] 2025-10-13 09:52:32,438 [wrapper] supervise_pilot (15 min periods counter: 54)
[2025-10-13 05:53:06] 2025-10-13 09:52:57,180 | INFO     | PID=971466 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 05:53:06] 2025-10-13 09:52:57,181 | INFO     | .. there are 8 such processes running
[2025-10-13 05:53:06] 2025-10-13 09:52:57,182 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:53:06] 2025-10-13 09:52:57,182 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:53:06] 2025-10-13 09:52:57,182 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:53:06] 2025-10-13 09:52:57,712 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:53:06] 2025-10-13 09:52:59,708 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140282105788224)>', '<ExcThread(monitor, started 140281433265920)>']
[2025-10-13 05:53:06] 2025-10-13 09:53:00,229 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:53:06] 2025-10-13 09:53:00,229 | INFO     | [monitor] control thread has ended
[2025-10-13 05:53:06] 2025-10-13 09:53:04,742 | INFO     | all workflow threads have been joined
[2025-10-13 05:53:06] 2025-10-13 09:53:04,742 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:53:06] 2025-10-13 09:53:04,742 | INFO     | traces error code: 0
[2025-10-13 05:53:06] 2025-10-13 09:53:04,752 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:53:06] 2025-10-13 09:53:05,147 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:53:06] 2025-10-13 09:53:05,167 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:53:06] 2025-10-13 09:53:05,183 [wrapper] pilotpid: 971466
[2025-10-13 05:53:06] 2025-10-13 09:53:05,211 [wrapper] Pilot exit status: 0
[2025-10-13 05:53:06] 2025-10-13 09:53:05,333 [wrapper] pandaids: 6839774617
[2025-10-13 05:53:06] 2025-10-13 09:53:05,653 [wrapper] cleanup supervisor_pilot 2070207 971467
[2025-10-13 05:53:06] 2025-10-13 09:53:05,664 [wrapper] Test setup, not cleaning
[2025-10-13 05:53:06] 2025-10-13 09:53:05,672 [wrapper] apfmon messages muted
[2025-10-13 05:53:06] 2025-10-13 09:53:05,676 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:53:06] 2025-10-13 09:53:05,696 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:53:06]  *** Error codes and diagnostics ***
[2025-10-13 05:53:06]     "exeErrorCode": 0,
[2025-10-13 05:53:06]     "exeErrorDiag": "",
[2025-10-13 05:53:06]     "pilotErrorCode": 0,
[2025-10-13 05:53:06]     "pilotErrorDiag": "",
[2025-10-13 05:53:06]  *** Listing of results directory ***
[2025-10-13 05:53:06] total 424528
[2025-10-13 05:53:06] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 04:37 pilot3.tar.gz
[2025-10-13 05:53:06] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 04:41 queuedata.json
[2025-10-13 05:53:06] -rwx------. 1 boincer umatlas     36292 Oct 12 04:41 runpilot2-wrapper.sh
[2025-10-13 05:53:06] -rw-r--r--. 1 boincer umatlas       100 Oct 12 16:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:53:06] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 16:35 run_atlas
[2025-10-13 05:53:06] -rw-r--r--. 1 boincer umatlas       105 Oct 12 16:35 job.xml
[2025-10-13 05:53:06] -rw-r--r--. 2 boincer umatlas 221901291 Oct 12 16:35 EVNT.46676267._003542.pool.root.1
[2025-10-13 05:53:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:35 start_atlas.sh
[2025-10-13 05:53:06] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 16:35 shared
[2025-10-13 05:53:06] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 16:35 input.tar.gz
[2025-10-13 05:53:06] -rw-r--r--. 1 boincer umatlas         0 Oct 12 16:35 boinc_lockfile
[2025-10-13 05:53:06] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 16:36 pandaJob.out
[2025-10-13 05:53:06] -rw-------. 1 boincer umatlas    975536 Oct 12 16:37 agis_schedconf.cvmfs.json
[2025-10-13 05:53:06] drwx------. 5 boincer umatlas      4096 Oct 12 16:37 pilot3
[2025-10-13 05:53:06] -rw-r--r--. 1 boincer umatlas      6525 Oct 13 05:49 init_data.xml
[2025-10-13 05:53:06] -rw-------. 1 boincer umatlas 195469759 Oct 13 05:50 HITS.46676269._074509.pool.root.1
[2025-10-13 05:53:06] -rw-r--r--. 1 boincer umatlas       531 Oct 13 05:50 boinc_task_state.xml
[2025-10-13 05:53:06] -rw-------. 1 boincer umatlas      1043 Oct 13 05:51 memory_monitor_summary.json
[2025-10-13 05:53:06] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:51 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:53:06] -rw-------. 1 boincer umatlas    898918 Oct 13 05:51 log.46676269._074509.job.log.tgz.1
[2025-10-13 05:53:06] -rw-------. 1 boincer umatlas      7825 Oct 13 05:52 heartbeat.json
[2025-10-13 05:53:06] -rw-------. 1 boincer umatlas        95 Oct 13 05:52 pilot_heartbeat.json
[2025-10-13 05:53:06] -rw-r--r--. 1 boincer umatlas        28 Oct 13 05:53 wrapper_checkpoint.txt
[2025-10-13 05:53:06] -rw-------. 1 boincer umatlas      4822 Oct 13 05:53 pilotlog.txt
[2025-10-13 05:53:06] -rw-------. 1 boincer umatlas   5821561 Oct 13 05:53 log.46676269._074509.job.log.1
[2025-10-13 05:53:06] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:53 boinc_mmap_file
[2025-10-13 05:53:06] -rw-------. 1 boincer umatlas       357 Oct 13 05:53 output.list
[2025-10-13 05:53:06] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:53 runtime_log
[2025-10-13 05:53:06] -rw-------. 1 boincer umatlas   6737920 Oct 13 05:53 result.tar.gz
[2025-10-13 05:53:06] -rw-r--r--. 1 boincer umatlas      8706 Oct 13 05:53 runtime_log.err
[2025-10-13 05:53:06] -rw-------. 1 boincer umatlas       659 Oct 13 05:53 qA1NDmIp6R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvCjNDmLXqTGo.diag
[2025-10-13 05:53:06] -rw-r--r--. 1 boincer umatlas     21112 Oct 13 05:53 stderr.txt
[2025-10-13 05:53:06] HITS file was successfully produced:
[2025-10-13 05:53:06] -rw-------. 1 boincer umatlas 195469759 Oct 13 05:50 shared/HITS.pool.root.1
[2025-10-13 05:53:06]  *** Contents of shared directory: ***
[2025-10-13 05:53:06] total 414756
[2025-10-13 05:53:06] -rw-r--r--. 2 boincer umatlas 221901291 Oct 12 16:35 ATLAS.root_0
[2025-10-13 05:53:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 16:35 start_atlas.sh
[2025-10-13 05:53:06] -rw-r--r--. 2 boincer umatlas    569681 Oct 12 16:35 input.tar.gz
[2025-10-13 05:53:06] -rw-------. 1 boincer umatlas 195469759 Oct 13 05:50 HITS.pool.root.1
[2025-10-13 05:53:06] -rw-------. 1 boincer umatlas   6737920 Oct 13 05:53 result.tar.gz
05:53:07 (967048): run_atlas exited; CPU time 79709.541052
05:53:07 (967048): called boinc_finish(0)

</stderr_txt>
]]>

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