Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:05:26 (16225): wrapper (7.7.26015): starting
09:05:26 (16225): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 09:05:26] Arguments: --nthreads 12
[2025-10-12 09:05:26] Threads: 12
[2025-10-12 09:05:26] Checking for CVMFS
[2025-10-12 09:05:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:05:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:05:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:05:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:05:26] 2.11.2.0 2933 222919 98556 151620 1 59 15201828 20275201 1 130560 2 107359714 99.983 13086987 12460 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 09:05:26] CVMFS is ok
[2025-10-12 09:05:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:05:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:05:26] Further information can be found at the LHC@home message board.
[2025-10-12 09:05:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:05:26] Checking for apptainer binary...
[2025-10-12 09:05:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:05:26] Running /usr/bin/apptainer --version
[2025-10-12 09:05:26] apptainer version 1.3.2-1.el7
[2025-10-12 09:05:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:05:28] c-205-15.aglt2.org
[2025-10-12 09:05:28] apptainer works
[2025-10-12 09:05:28] Set ATHENA_PROC_NUMBER=12
[2025-10-12 09:05:28] Set ATHENA_CORE_NUMBER=12
[2025-10-12 09:05:28] Starting ATLAS job with PandaID=6839870955
[2025-10-12 09:05:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:18:55]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:18:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 10:18:55]  replicas=None
[2025-10-12 10:18:55]  scope=mc23_13p6TeV
[2025-10-12 10:18:55]  status=None
[2025-10-12 10:18:55]  status_code=0
[2025-10-12 10:18:55]  storage_token=
[2025-10-12 10:18:55]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6839870955/log.46676269._077192.job.log.tgz.1
[2025-10-12 10:18:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/be/log.46676269._077192.job.log.tgz.1
[2025-10-12 10:18:55]  workdir=None
[2025-10-12 10:18:55] ]
[2025-10-12 10:18:55] 2025-10-12 14:17:54,453 | INFO     | transferring file log.46676269._077192.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6839870955/log.46676269._077192.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-12 10:18:55] 2025-10-12 14:17:54,453 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6839870955/log.46676269._077192.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._077192.job
[2025-10-12 10:18:55] 2025-10-12 14:17:54,474 | INFO     | adding to output.list: log.46676269._077192.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b3/be/log.46676269._077192.job.log.tg
[2025-10-12 10:18:55] 2025-10-12 14:17:54,475 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 10:18:55] 2025-10-12 14:17:54,476 | INFO     | summary of transferred files:
[2025-10-12 10:18:55] 2025-10-12 14:17:54,476 | INFO     |  -- lfn=log.46676269._077192.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 10:18:55] 2025-10-12 14:17:54,476 | INFO     | stage-out finished correctly
[2025-10-12 10:18:55] 2025-10-12 14:17:54,560 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 10:18:55] 2025-10-12 14:17:54,866 | INFO     | monitor loop #323: job 0:6839870955 is in state 'finished'
[2025-10-12 10:18:55] 2025-10-12 14:17:54,866 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:18:55] 2025-10-12 14:17:56,273 | INFO     | time since job start (4334s) is within the limit (172800.0s)
[2025-10-12 10:18:55] 2025-10-12 14:17:56,837 | INFO     | job 6839870955 has state=finished
[2025-10-12 10:18:55] 2025-10-12 14:17:56,837 | INFO     | preparing for final server update for job 6839870955 in state='finished'
[2025-10-12 10:18:55] 2025-10-12 14:17:56,837 | INFO     | this job has now completed (state=finished)
[2025-10-12 10:18:55] 2025-10-12 14:17:56,838 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 10:18:55] 2025-10-12 14:17:56,838 | INFO     | log transfer has been attempted: DONE
[2025-10-12 10:18:55] 2025-10-12 14:17:56,838 | INFO     | job 6839870955 has finished - writing final server update
[2025-10-12 10:18:55] 2025-10-12 14:17:56,838 | INFO     | total number of processed events: 400 (read)
[2025-10-12 10:18:55] 2025-10-12 14:17:56,841 | INFO     | executing command: lscpu
[2025-10-12 10:18:55] 2025-10-12 14:17:56,871 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 10:18:55] 2025-10-12 14:17:57,370 | INFO     | monitor loop #324: job 0:6839870955 is in state 'finished'
[2025-10-12 10:18:55] 2025-10-12 14:17:57,370 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:18:55] 2025-10-12 14:17:58,279 | INFO     | time since job start (4336s) is within the limit (172800.0s)
[2025-10-12 10:18:55] 2025-10-12 14:17:59,873 | INFO     | monitor loop #325: job 0:6839870955 is in state 'finished'
[2025-10-12 10:18:55] 2025-10-12 14:17:59,874 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:18:55] 2025-10-12 14:18:00,284 | INFO     | time since job start (4338s) is within the limit (172800.0s)
[2025-10-12 10:18:55] 2025-10-12 14:18:01,674 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 10:18:55] 2025-10-12 14:18:01,678 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1773.5
[2025-10-12 10:18:55] 2025-10-12 14:18:01,681 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839870955/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 10:18:55] 2025-10-12 14:18:01,682 | INFO     | extracted standard info from prmon json
[2025-10-12 10:18:55] 2025-10-12 14:18:01,682 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:18:55] 2025-10-12 14:18:01,682 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:18:55] 2025-10-12 14:18:01,683 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:18:55] 2025-10-12 14:18:01,683 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:18:55] 2025-10-12 14:18:01,685 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:18:55] 2025-10-12 14:18:01,685 | INFO     | sum of square deviations: 81266640.0
[2025-10-12 10:18:55] 2025-10-12 14:18:01,685 | INFO     | sum of deviations: -1010006036.0
[2025-10-12 10:18:55] 2025-10-12 14:18:01,685 | INFO     | mean x: 1760276597.5
[2025-10-12 10:18:55] 2025-10-12 14:18:01,685 | INFO     | mean y: 2682319.25
[2025-10-12 10:18:55] 2025-10-12 14:18:01,685 | INFO     | -- intersect: 21879924795.4314
[2025-10-12 10:18:55] 2025-10-12 14:18:01,686 | INFO     | intersect: 21879924795.4314
[2025-10-12 10:18:55] 2025-10-12 14:18:01,686 | INFO     | chi2: 0.028690733432633328
[2025-10-12 10:18:55] 2025-10-12 14:18:01,686 | INFO     | -- intersect: 21879924795.4314
[2025-10-12 10:18:55] 2025-10-12 14:18:01,686 | INFO     | current memory leak: -12.43 B/s (using 64 data points, chi2=0.03)
[2025-10-12 10:18:55] 2025-10-12 14:18:01,686 | INFO     | could have reported an average CPU frequency of 2054 MHz (6 samples)
[2025-10-12 10:18:55] 2025-10-12 14:18:01,686 | INFO     | ..............................
[2025-10-12 10:18:55] 2025-10-12 14:18:01,687 | INFO     | . Timing measurements:
[2025-10-12 10:18:55] 2025-10-12 14:18:01,687 | INFO     | . get job = 0 s
[2025-10-12 10:18:55] 2025-10-12 14:18:01,687 | INFO     | . initial setup = 2 s
[2025-10-12 10:18:55] 2025-10-12 14:18:01,687 | INFO     | . payload setup = 7 s
[2025-10-12 10:18:55] 2025-10-12 14:18:01,687 | INFO     | . stage-in = 0 s
[2025-10-12 10:18:55] 2025-10-12 14:18:01,687 | INFO     | . payload execution = 4304 s
[2025-10-12 10:18:55] 2025-10-12 14:18:01,687 | INFO     | . stage-out = 0 s
[2025-10-12 10:18:55] 2025-10-12 14:18:01,687 | INFO     | . log creation = 0 s
[2025-10-12 10:18:55] 2025-10-12 14:18:01,687 | INFO     | ..............................
[2025-10-12 10:18:55] 2025-10-12 14:18:02,173 | INFO     | 
[2025-10-12 10:18:55] 2025-10-12 14:18:02,174 | INFO     | job summary report
[2025-10-12 10:18:55] 2025-10-12 14:18:02,174 | INFO     | --------------------------------------------------
[2025-10-12 10:18:55] 2025-10-12 14:18:02,174 | INFO     | PanDA job id: 6839870955
[2025-10-12 10:18:55] 2025-10-12 14:18:02,174 | INFO     | task id: 46676269
[2025-10-12 10:18:55] 2025-10-12 14:18:02,174 | INFO     | errors: (none)
[2025-10-12 10:18:55] 2025-10-12 14:18:02,174 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:18:55] 2025-10-12 14:18:02,175 | INFO     | pilot state: finished 
[2025-10-12 10:18:55] 2025-10-12 14:18:02,175 | INFO     | transexitcode: 0
[2025-10-12 10:18:55] 2025-10-12 14:18:02,175 | INFO     | exeerrorcode: 0
[2025-10-12 10:18:55] 2025-10-12 14:18:02,175 | INFO     | exeerrordiag: 
[2025-10-12 10:18:55] 2025-10-12 14:18:02,175 | INFO     | exitcode: 0
[2025-10-12 10:18:55] 2025-10-12 14:18:02,175 | INFO     | exitmsg: OK
[2025-10-12 10:18:55] 2025-10-12 14:18:02,175 | INFO     | cpuconsumptiontime: 46073 s
[2025-10-12 10:18:55] 2025-10-12 14:18:02,175 | INFO     | nevents: 400
[2025-10-12 10:18:55] 2025-10-12 14:18:02,175 | INFO     | neventsw: 0
[2025-10-12 10:18:55] 2025-10-12 14:18:02,175 | INFO     | pid: 26440
[2025-10-12 10:18:55] 2025-10-12 14:18:02,176 | INFO     | pgrp: 26440
[2025-10-12 10:18:55] 2025-10-12 14:18:02,176 | INFO     | corecount: 12
[2025-10-12 10:18:55] 2025-10-12 14:18:02,176 | INFO     | event service: False
[2025-10-12 10:18:55] 2025-10-12 14:18:02,176 | INFO     | sizes: {0: 2348855, 1: 2348855, 5: 2349145, 11: 2349201, 4315: 2375221, 4316: 2384403, 4323: 2384541}
[2025-10-12 10:18:55] 2025-10-12 14:18:02,176 | INFO     | --------------------------------------------------
[2025-10-12 10:18:55] 2025-10-12 14:18:02,176 | INFO     | 
[2025-10-12 10:18:55] 2025-10-12 14:18:02,176 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 10:18:55] 2025-10-12 14:18:02,199 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:18:55] 2025-10-12 14:18:02,200 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:18:55] 2025-10-12 14:18:02,200 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:18:55] 2025-10-12 14:18:02,200 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:18:55] 2025-10-12 14:18:02,200 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:18:55] 2025-10-12 14:18:02,200 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:18:55] 2025-10-12 14:18:02,201 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:18:55] 2025-10-12 14:18:02,201 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:18:55] 2025-10-12 14:18:02,201 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:18:55] 2025-10-12 14:18:02,201 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:18:55] 2025-10-12 14:18:02,201 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:18:55] 2025-10-12 14:18:02,201 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:18:55] 2025-10-12 14:18:02,202 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:18:55] 2025-10-12 14:18:02,202 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:18:55] 2025-10-12 14:18:02,202 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:18:55] 2025-10-12 14:18:02,202 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:18:55] 2025-10-12 14:18:02,202 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:18:55] 2025-10-12 14:18:02,202 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:18:55] 2025-10-12 14:18:02,203 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:18:55] 2025-10-12 14:18:02,203 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:18:55] 2025-10-12 14:18:02,203 | INFO     | job 6839870955 has completed (purged errors)
[2025-10-12 10:18:55] 2025-10-12 14:18:02,203 | INFO     | overall cleanup function is called
[2025-10-12 10:18:55] 2025-10-12 14:18:03,211 | INFO     | --- collectZombieJob: --- 10, [26440]
[2025-10-12 10:18:55] 2025-10-12 14:18:03,211 | INFO     | zombie collector waiting for pid 26440
[2025-10-12 10:18:55] 2025-10-12 14:18:03,211 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:18:55] 2025-10-12 14:18:03,211 | INFO     | collected zombie processes
[2025-10-12 10:18:55] 2025-10-12 14:18:03,212 | INFO     | will attempt to kill all subprocesses of pid=26440
[2025-10-12 10:18:55] 2025-10-12 14:18:03,304 | INFO     | process IDs to be killed: [26440] (in reverse order)
[2025-10-12 10:18:55] 2025-10-12 14:18:03,357 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:18:55] 2025-10-12 14:18:03,358 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:18:55] 2025-10-12 14:18:03,362 | INFO     | did not find any defunct processes belonging to 26440
[2025-10-12 10:18:55] 2025-10-12 14:18:03,365 | INFO     | did not find any defunct processes belonging to 26440
[2025-10-12 10:18:55] 2025-10-12 14:18:03,365 | INFO     | ready for new job
[2025-10-12 10:18:55] 2025-10-12 14:18:03,365 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:18:55] 2025-10-12 14:18:03,366 | INFO     | ***************************************
[2025-10-12 10:18:55] 2025-10-12 14:18:03,366 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:18:55] 2025-10-12 14:18:03,367 | INFO     | ***************************************
[2025-10-12 10:18:55] 2025-10-12 14:18:03,367 | INFO     | 
[2025-10-12 10:18:55] 2025-10-12 14:18:03,367 | INFO     | architecture information:
[2025-10-12 10:18:55] 2025-10-12 14:18:03,368 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:18:55] 2025-10-12 14:18:03,382 | INFO     | cat /etc/os-release:
[2025-10-12 10:18:55] NAME="CentOS Linux"
[2025-10-12 10:18:55] VERSION="7 (Core)"
[2025-10-12 10:18:55] ID="centos"
[2025-10-12 10:18:55] ID_LIKE="rhel fedora"
[2025-10-12 10:18:55] VERSION_ID="7"
[2025-10-12 10:18:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:18:55] ANSI_COLOR="0;31"
[2025-10-12 10:18:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:18:55] HOME_URL="https://www.centos.org/"
[2025-10-12 10:18:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:18:55] 
[2025-10-12 10:18:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:18:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:18:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:18:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:18:55] 
[2025-10-12 10:18:55] 2025-10-12 14:18:03,383 | INFO     | ***************************************
[2025-10-12 10:18:55] 2025-10-12 14:18:03,886 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 10:18:55] 2025-10-12 14:18:03,902 | INFO     | sufficient remaining disk space (29369565184 B)
[2025-10-12 10:18:55] 2025-10-12 14:18:03,902 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:18:55] 2025-10-12 14:18:03,902 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:18:55] 2025-10-12 14:18:03,903 | INFO     | update_server=False
[2025-10-12 10:18:55] 2025-10-12 14:18:03,903 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:18:55] 2025-10-12 14:18:03,903 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:18:55] 2025-10-12 14:18:03,903 | INFO     | aborting loop
[2025-10-12 10:18:55] 2025-10-12 14:18:03,991 | INFO     | all payload control threads have been joined
[2025-10-12 10:18:55] 2025-10-12 14:18:04,856 | INFO     | all data control threads have been joined
[2025-10-12 10:18:55] 2025-10-12 14:18:04,908 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:18:55] 2025-10-12 14:18:04,909 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:18:55] 2025-10-12 14:18:04,916 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:18:55] 2025-10-12 14:18:04,996 | INFO     | [payload] control thread has finished
[2025-10-12 10:18:55] 2025-10-12 14:18:05,020 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:18:55] 2025-10-12 14:18:05,075 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:18:55] 2025-10-12 14:18:05,149 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:18:55] 2025-10-12 14:18:05,166 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:18:55] 2025-10-12 14:18:05,327 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:18:55] 2025-10-12 14:18:05,401 | INFO     | all job control threads have been joined
[2025-10-12 10:18:55] 2025-10-12 14:18:05,861 | INFO     | [data] control thread has finished
[2025-10-12 10:18:55] 2025-10-12 14:18:05,954 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:18:55] 2025-10-12 14:18:06,213 | INFO     | [job] validate thread has finished
[2025-10-12 10:18:55] 2025-10-12 14:18:06,251 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:18:55] 2025-10-12 14:18:06,407 | INFO     | [job] control thread has finished
[2025-10-12 10:18:55] 2025-10-12 14:18:06,777 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:18:55] 2025-10-12 14:18:07,080 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:18:55] 2025-10-12 14:18:07,780 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:18:55] 2025-10-12 14:18:09,154 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:18:55] 2025-10-12 14:18:14,056 | INFO     | job.realtimelogging is not enabled
[2025-10-12 10:18:55] 2025-10-12 14:18:15,061 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:18:55] 2025-10-12 14:18:33,481 | INFO     | PID=20005 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 10:18:55] 2025-10-12 14:18:33,482 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:18:55] 2025-10-12 14:18:33,482 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:18:55] 2025-10-12 14:18:33,482 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:18:55] 2025-10-12 14:18:48,967 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:18:55] 2025-10-12 14:18:50,593 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140080921888576)>', '<ExcThread(monitor, started 140080324785920)>']
[2025-10-12 10:18:55] 2025-10-12 14:18:51,568 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:18:55] 2025-10-12 14:18:51,568 | INFO     | [monitor] control thread has ended
[2025-10-12 10:18:55] 2025-10-12 14:18:55,616 | INFO     | all workflow threads have been joined
[2025-10-12 10:18:55] 2025-10-12 14:18:55,616 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:18:55] 2025-10-12 14:18:55,616 | INFO     | traces error code: 0
[2025-10-12 10:18:55] 2025-10-12 14:18:55,616 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:18:55] 2025-10-12 14:18:55,701 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:18:55] 2025-10-12 14:18:55,706 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:18:55] 2025-10-12 14:18:55,710 [wrapper] pilotpid: 20005
[2025-10-12 10:18:55] 2025-10-12 14:18:55,713 [wrapper] Pilot exit status: 0
[2025-10-12 10:18:55] 2025-10-12 14:18:55,730 [wrapper] pandaids: 6839870955
[2025-10-12 10:18:55] 2025-10-12 14:18:55,773 [wrapper] cleanup supervisor_pilot 29069 20006
[2025-10-12 10:18:55] 2025-10-12 14:18:55,777 [wrapper] Test setup, not cleaning
[2025-10-12 10:18:55] 2025-10-12 14:18:55,781 [wrapper] apfmon messages muted
[2025-10-12 10:18:55] 2025-10-12 14:18:55,786 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:18:55] 2025-10-12 14:18:55,790 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:18:55]  *** Error codes and diagnostics ***
[2025-10-12 10:18:55]     "exeErrorCode": 0,
[2025-10-12 10:18:55]     "exeErrorDiag": "",
[2025-10-12 10:18:55]     "pilotErrorCode": 0,
[2025-10-12 10:18:55]     "pilotErrorDiag": "",
[2025-10-12 10:18:55]  *** Listing of results directory ***
[2025-10-12 10:18:55] total 407568
[2025-10-12 10:18:55] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 07:23 pilot3.tar.gz
[2025-10-12 10:18:55] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 07:36 queuedata.json
[2025-10-12 10:18:55] -rwx------ 1 boincer umatlas     36292 Oct 12 07:36 runpilot2-wrapper.sh
[2025-10-12 10:18:55] -rw-r--r-- 1 boincer umatlas       100 Oct 12 09:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:18:55] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 09:05 run_atlas
[2025-10-12 10:18:55] -rw-r--r-- 1 boincer umatlas       105 Oct 12 09:05 job.xml
[2025-10-12 10:18:55] -rw-r--r-- 2 boincer umatlas 220183312 Oct 12 09:05 EVNT.46676267._003700.pool.root.1
[2025-10-12 10:18:55] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 09:05 input.tar.gz
[2025-10-12 10:18:55] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:05 start_atlas.sh
[2025-10-12 10:18:55] drwxrwx--x 2 boincer umatlas      4096 Oct 12 09:05 shared
[2025-10-12 10:18:55] -rw-r--r-- 1 boincer umatlas         0 Oct 12 09:05 boinc_lockfile
[2025-10-12 10:18:55] -rw-r--r-- 1 boincer umatlas      2549 Oct 12 09:05 pandaJob.out
[2025-10-12 10:18:55] -rw------- 1 boincer umatlas    975512 Oct 12 09:05 agis_schedconf.cvmfs.json
[2025-10-12 10:18:55] -rw------- 1 boincer umatlas   1560580 Oct 12 09:05 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:18:55] drwx------ 5 boincer umatlas      4096 Oct 12 09:05 pilot3
[2025-10-12 10:18:55] -rw-r--r-- 1 boincer umatlas      5953 Oct 12 10:10 init_data.xml
[2025-10-12 10:18:55] -rw------- 1 boincer umatlas 191252654 Oct 12 10:17 HITS.46676269._077192.pool.root.1
[2025-10-12 10:18:55] -rw------- 1 boincer umatlas        95 Oct 12 10:17 pilot_heartbeat.json
[2025-10-12 10:18:55] -rw-r--r-- 1 boincer umatlas       529 Oct 12 10:17 boinc_task_state.xml
[2025-10-12 10:18:55] -rw------- 1 boincer umatlas      1049 Oct 12 10:17 memory_monitor_summary.json
[2025-10-12 10:18:55] -rw------- 1 boincer umatlas    368700 Oct 12 10:17 log.46676269._077192.job.log.tgz.1
[2025-10-12 10:18:55] -rw------- 1 boincer umatlas      7852 Oct 12 10:18 heartbeat.json
[2025-10-12 10:18:55] -rw-r--r-- 1 boincer umatlas        27 Oct 12 10:18 wrapper_checkpoint.txt
[2025-10-12 10:18:55] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 10:18 boinc_mmap_file
[2025-10-12 10:18:55] -rw------- 1 boincer umatlas      4818 Oct 12 10:18 pilotlog.txt
[2025-10-12 10:18:55] -rw------- 1 boincer umatlas    631038 Oct 12 10:18 log.46676269._077192.job.log.1
[2025-10-12 10:18:55] -rw------- 1 boincer umatlas       357 Oct 12 10:18 output.list
[2025-10-12 10:18:55] -rw-r--r-- 1 boincer umatlas       620 Oct 12 10:18 runtime_log
[2025-10-12 10:18:55] -rw------- 1 boincer umatlas   1024000 Oct 12 10:18 result.tar.gz
[2025-10-12 10:18:55] -rw-r--r-- 1 boincer umatlas      8705 Oct 12 10:18 runtime_log.err
[2025-10-12 10:18:55] -rw------- 1 boincer umatlas       659 Oct 12 10:18 QWuLDm9X9R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3djNDmD3daDo.diag
[2025-10-12 10:18:55] -rw-r--r-- 1 boincer umatlas     21820 Oct 12 10:18 stderr.txt
[2025-10-12 10:18:55] HITS file was successfully produced:
[2025-10-12 10:18:55] -rw------- 1 boincer umatlas 191252654 Oct 12 10:17 shared/HITS.pool.root.1
[2025-10-12 10:18:55]  *** Contents of shared directory: ***
[2025-10-12 10:18:55] total 403380
[2025-10-12 10:18:55] -rw-r--r-- 2 boincer umatlas 220183312 Oct 12 09:05 ATLAS.root_0
[2025-10-12 10:18:55] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 09:05 input.tar.gz
[2025-10-12 10:18:55] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:05 start_atlas.sh
[2025-10-12 10:18:55] -rw------- 1 boincer umatlas 191252654 Oct 12 10:17 HITS.pool.root.1
[2025-10-12 10:18:55] -rw------- 1 boincer umatlas   1024000 Oct 12 10:18 result.tar.gz
10:18:57 (16225): run_atlas exited; CPU time 46041.101628
10:18:57 (16225): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN