Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:32:58 (9674): wrapper (7.7.26015): starting
23:32:58 (9674): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 23:32:58] Arguments: --nthreads 8
[2025-10-12 23:32:58] Threads: 8
[2025-10-12 23:32:58] Checking for CVMFS
[2025-10-12 23:33:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:33:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:33:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:33:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:33:02] 2.11.2.0 1038 107920 106308 151638 2 60 21677570 25165824 4632 130560 0 36832414 99.913 14879576 2567 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 23:33:02] CVMFS is ok
[2025-10-12 23:33:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:33:02] Checking for apptainer binary...
[2025-10-12 23:33:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:33:02] Running /usr/bin/apptainer --version
[2025-10-12 23:33:02] apptainer version 1.3.2-1.el7
[2025-10-12 23:33:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:33:15] cg-vwn304.simple-grid.lan
[2025-10-12 23:33:15] apptainer works
[2025-10-12 23:33:15] Set ATHENA_PROC_NUMBER=8
[2025-10-12 23:33:15] Set ATHENA_CORE_NUMBER=8
[2025-10-12 23:33:15] Starting ATLAS job with PandaID=6839774985
[2025-10-12 23:33:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:37:22]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:37:22] 2025-10-13 01:36:24,634 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 03:37:22] 2025-10-13 01:36:24,654 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 03:37:22] 2025-10-13 01:36:24,655 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-10-13 03:37:22] 2025-10-13 01:36:24,657 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6839774985/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 03:37:22] 2025-10-13 01:36:24,658 | INFO     | extracted standard info from prmon json
[2025-10-13 03:37:22] 2025-10-13 01:36:24,658 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 03:37:22] 2025-10-13 01:36:24,658 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:37:22] 2025-10-13 01:36:24,658 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:37:22] 2025-10-13 01:36:24,658 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:37:22] 2025-10-13 01:36:24,664 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:37:22] 2025-10-13 01:36:24,664 | INFO     | sum of square deviations: 3627000098.0
[2025-10-13 03:37:22] 2025-10-13 01:36:24,666 | INFO     | sum of deviations: 55899518550.000015
[2025-10-13 03:37:22] 2025-10-13 01:36:24,666 | INFO     | mean x: 1760312375.0
[2025-10-13 03:37:22] 2025-10-13 01:36:24,667 | INFO     | mean y: 2444480.374449339
[2025-10-13 03:37:22] 2025-10-13 01:36:24,667 | INFO     | -- intersect: -27127583532.13295
[2025-10-13 03:37:22] 2025-10-13 01:36:24,667 | INFO     | intersect: -27127583532.13295
[2025-10-13 03:37:22] 2025-10-13 01:36:24,667 | INFO     | chi2: 5.071027487881991
[2025-10-13 03:37:22] 2025-10-13 01:36:24,668 | INFO     | sum of square deviations: 3392567795.5
[2025-10-13 03:37:22] 2025-10-13 01:36:24,669 | INFO     | sum of deviations: 69348043095.49998
[2025-10-13 03:37:22] 2025-10-13 01:36:24,670 | INFO     | mean x: 1760312222.5
[2025-10-13 03:37:22] 2025-10-13 01:36:24,670 | INFO     | mean y: 2453054.518018018
[2025-10-13 03:37:22] 2025-10-13 01:36:24,670 | INFO     | -- intersect: -35980382138.75008
[2025-10-13 03:37:22] 2025-10-13 01:36:24,670 | INFO     | intersect: -35980382138.75008
[2025-10-13 03:37:22] 2025-10-13 01:36:24,670 | INFO     | chi2: 4.340670668689205
[2025-10-13 03:37:22] 2025-10-13 01:36:24,670 | INFO     | current chi2=4.340670668689205 (change=14.40254112086924 %)
[2025-10-13 03:37:22] 2025-10-13 01:36:24,671 | INFO     | right removable region: 221
[2025-10-13 03:37:22] 2025-10-13 01:36:24,671 | INFO     | sum of square deviations: 3392567795.5
[2025-10-13 03:37:22] 2025-10-13 01:36:24,673 | INFO     | sum of deviations: -15540686319.5
[2025-10-13 03:37:22] 2025-10-13 01:36:24,673 | INFO     | mean x: 1760312527.5
[2025-10-13 03:37:22] 2025-10-13 01:36:24,673 | INFO     | mean y: 2490861.3198198196
[2025-10-13 03:37:22] 2025-10-13 01:36:24,673 | INFO     | -- intersect: 8066136590.212879
[2025-10-13 03:37:22] 2025-10-13 01:36:24,673 | INFO     | intersect: 8066136590.212879
[2025-10-13 03:37:22] 2025-10-13 01:36:24,674 | INFO     | chi2: 1.1529342648252308
[2025-10-13 03:37:22] 2025-10-13 01:36:24,674 | INFO     | current chi2=1.1529342648252308 (change=77.26428682194394 %)
[2025-10-13 03:37:22] 2025-10-13 01:36:24,674 | INFO     | sum of square deviations: 3168461268.0
[2025-10-13 03:37:22] 2025-10-13 01:36:24,676 | INFO     | sum of deviations: -27486253458.99997
[2025-10-13 03:37:22] 2025-10-13 01:36:24,676 | INFO     | mean x: 1760312680.0
[2025-10-13 03:37:22] 2025-10-13 01:36:24,676 | INFO     | mean y: 2498872.0184331797
[2025-10-13 03:37:22] 2025-10-13 01:36:24,676 | INFO     | -- intersect: 15273129123.437843
[2025-10-13 03:37:22] 2025-10-13 01:36:24,676 | INFO     | intersect: 15273129123.437843
[2025-10-13 03:37:22] 2025-10-13 01:36:24,677 | INFO     | chi2: 0.9024916882689731
[2025-10-13 03:37:22] 2025-10-13 01:36:24,677 | INFO     | current chi2=0.9024916882689731 (change=21.72219043157863 %)
[2025-10-13 03:37:22] 2025-10-13 01:36:24,677 | INFO     | left removable region: 20
[2025-10-13 03:37:22] 2025-10-13 01:36:24,678 | INFO     | sum of square deviations: 2518000700.0
[2025-10-13 03:37:22] 2025-10-13 01:36:24,679 | INFO     | sum of deviations: 1886860295.9999998
[2025-10-13 03:37:22] 2025-10-13 01:36:24,679 | INFO     | mean x: 1760312802.0
[2025-10-13 03:37:22] 2025-10-13 01:36:24,680 | INFO     | mean y: 2497772.4378109453
[2025-10-13 03:37:22] 2025-10-13 01:36:24,680 | INFO     | -- intersect: -1316590158.9651904
[2025-10-13 03:37:22] 2025-10-13 01:36:24,680 | INFO     | intersect: -1316590158.9651904
[2025-10-13 03:37:22] 2025-10-13 01:36:24,680 | INFO     | chi2: 0.037811485867090364
[2025-10-13 03:37:22] 2025-10-13 01:36:24,680 | INFO     | -- intersect: -1316590158.9651904
[2025-10-13 03:37:22] 2025-10-13 01:36:24,681 | INFO     | current memory leak: 0.75 B/s (using 201 data points, chi2=0.04)
[2025-10-13 03:37:22] 2025-10-13 01:36:24,681 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 03:37:22] 2025-10-13 01:36:24,682 | INFO     | ..............................
[2025-10-13 03:37:22] 2025-10-13 01:36:24,682 | INFO     | . Timing measurements:
[2025-10-13 03:37:22] 2025-10-13 01:36:24,682 | INFO     | . get job = 0 s
[2025-10-13 03:37:22] 2025-10-13 01:36:24,682 | INFO     | . initial setup = 10 s
[2025-10-13 03:37:22] 2025-10-13 01:36:24,682 | INFO     | . payload setup = 127 s
[2025-10-13 03:37:22] 2025-10-13 01:36:24,682 | INFO     | . stage-in = 0 s
[2025-10-13 03:37:22] 2025-10-13 01:36:24,682 | INFO     | . payload execution = 13957 s
[2025-10-13 03:37:22] 2025-10-13 01:36:24,682 | INFO     | . stage-out = 4 s
[2025-10-13 03:37:22] 2025-10-13 01:36:24,682 | INFO     | . log creation = 1 s
[2025-10-13 03:37:22] 2025-10-13 01:36:24,682 | INFO     | ..............................
[2025-10-13 03:37:22] 2025-10-13 01:36:24,820 | INFO     | 
[2025-10-13 03:37:22] 2025-10-13 01:36:24,821 | INFO     | job summary report
[2025-10-13 03:37:22] 2025-10-13 01:36:24,821 | INFO     | --------------------------------------------------
[2025-10-13 03:37:22] 2025-10-13 01:36:24,821 | INFO     | PanDA job id: 6839774985
[2025-10-13 03:37:22] 2025-10-13 01:36:24,821 | INFO     | task id: 46676269
[2025-10-13 03:37:22] 2025-10-13 01:36:24,821 | INFO     | errors: (none)
[2025-10-13 03:37:22] 2025-10-13 01:36:24,821 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:37:22] 2025-10-13 01:36:24,821 | INFO     | pilot state: finished 
[2025-10-13 03:37:22] 2025-10-13 01:36:24,821 | INFO     | transexitcode: 0
[2025-10-13 03:37:22] 2025-10-13 01:36:24,821 | INFO     | exeerrorcode: 0
[2025-10-13 03:37:22] 2025-10-13 01:36:24,822 | INFO     | exeerrordiag: 
[2025-10-13 03:37:22] 2025-10-13 01:36:24,822 | INFO     | exitcode: 0
[2025-10-13 03:37:22] 2025-10-13 01:36:24,822 | INFO     | exitmsg: OK
[2025-10-13 03:37:22] 2025-10-13 01:36:24,822 | INFO     | cpuconsumptiontime: 52277 s
[2025-10-13 03:37:22] 2025-10-13 01:36:24,822 | INFO     | nevents: 400
[2025-10-13 03:37:22] 2025-10-13 01:36:24,822 | INFO     | neventsw: 0
[2025-10-13 03:37:22] 2025-10-13 01:36:24,822 | INFO     | pid: 19987
[2025-10-13 03:37:22] 2025-10-13 01:36:24,822 | INFO     | pgrp: 19987
[2025-10-13 03:37:22] 2025-10-13 01:36:24,823 | INFO     | corecount: 8
[2025-10-13 03:37:22] 2025-10-13 01:36:24,823 | INFO     | event service: False
[2025-10-13 03:37:22] 2025-10-13 01:36:24,823 | INFO     | sizes: {0: 2348630, 1: 2348885, 12: 2348885, 23: 2348913, 34: 2348941, 44: 2348969, 55: 2349125, 66: 2349153, 77: 2349181, 87: 2349237, 93: 2349527, 98: 2349835, 1
[2025-10-13 03:37:22] 2025-10-13 01:36:24,823 | INFO     | --------------------------------------------------
[2025-10-13 03:37:22] 2025-10-13 01:36:24,823 | INFO     | 
[2025-10-13 03:37:22] 2025-10-13 01:36:24,823 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-10-13 03:37:22] 2025-10-13 01:36:25,353 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:37:22] 2025-10-13 01:36:25,354 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:37:22] 2025-10-13 01:36:25,354 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:37:22] 2025-10-13 01:36:25,354 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:37:22] 2025-10-13 01:36:25,354 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:37:22] 2025-10-13 01:36:25,354 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:37:22] 2025-10-13 01:36:25,354 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:37:22] 2025-10-13 01:36:25,354 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:37:22] 2025-10-13 01:36:25,354 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:37:22] 2025-10-13 01:36:25,354 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:37:22] 2025-10-13 01:36:25,355 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:37:22] 2025-10-13 01:36:25,355 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:37:22] 2025-10-13 01:36:25,355 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:37:22] 2025-10-13 01:36:25,355 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:37:22] 2025-10-13 01:36:25,355 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:37:22] 2025-10-13 01:36:25,355 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:37:22] 2025-10-13 01:36:25,355 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:37:22] 2025-10-13 01:36:25,355 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:37:22] 2025-10-13 01:36:25,355 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:37:22] 2025-10-13 01:36:25,355 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:37:22] 2025-10-13 01:36:25,356 | INFO     | job 6839774985 has completed (purged errors)
[2025-10-13 03:37:22] 2025-10-13 01:36:25,356 | INFO     | overall cleanup function is called
[2025-10-13 03:37:22] 2025-10-13 01:36:26,365 | INFO     | --- collectZombieJob: --- 10, [19987]
[2025-10-13 03:37:22] 2025-10-13 01:36:26,365 | INFO     | zombie collector waiting for pid 19987
[2025-10-13 03:37:22] 2025-10-13 01:36:26,365 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:37:22] 2025-10-13 01:36:26,365 | INFO     | collected zombie processes
[2025-10-13 03:37:22] 2025-10-13 01:36:26,365 | INFO     | will attempt to kill all subprocesses of pid=19987
[2025-10-13 03:37:22] 2025-10-13 01:36:26,496 | INFO     | process IDs to be killed: [19987] (in reverse order)
[2025-10-13 03:37:22] 2025-10-13 01:36:27,367 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:37:22] 2025-10-13 01:36:27,368 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:37:22] 2025-10-13 01:36:27,371 | INFO     | did not find any defunct processes belonging to 19987
[2025-10-13 03:37:22] 2025-10-13 01:36:27,379 | INFO     | did not find any defunct processes belonging to 19987
[2025-10-13 03:37:22] 2025-10-13 01:36:27,380 | INFO     | ready for new job
[2025-10-13 03:37:22] 2025-10-13 01:36:27,380 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:37:22] 2025-10-13 01:36:27,382 | INFO     | ***************************************
[2025-10-13 03:37:22] 2025-10-13 01:36:27,382 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:37:22] 2025-10-13 01:36:27,382 | INFO     | ***************************************
[2025-10-13 03:37:22] 2025-10-13 01:36:27,382 | INFO     | 
[2025-10-13 03:37:22] 2025-10-13 01:36:27,383 | INFO     | pilot is running in a VM
[2025-10-13 03:37:22] 2025-10-13 01:36:27,383 | INFO     | architecture information:
[2025-10-13 03:37:22] 2025-10-13 01:36:27,390 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:37:22] 2025-10-13 01:36:27,505 | INFO     | cat /etc/os-release:
[2025-10-13 03:37:22] NAME="CentOS Linux"
[2025-10-13 03:37:22] VERSION="7 (Core)"
[2025-10-13 03:37:22] ID="centos"
[2025-10-13 03:37:22] ID_LIKE="rhel fedora"
[2025-10-13 03:37:22] VERSION_ID="7"
[2025-10-13 03:37:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:37:22] ANSI_COLOR="0;31"
[2025-10-13 03:37:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:37:22] HOME_URL="https://www.centos.org/"
[2025-10-13 03:37:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:37:22] 
[2025-10-13 03:37:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:37:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:37:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:37:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:37:22] 
[2025-10-13 03:37:22] 2025-10-13 01:36:27,506 | INFO     | ***************************************
[2025-10-13 03:37:22] 2025-10-13 01:36:28,009 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-10-13 03:37:22] 2025-10-13 01:36:28,151 | INFO     | sufficient remaining disk space (495482568704 B)
[2025-10-13 03:37:22] 2025-10-13 01:36:28,152 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:37:22] 2025-10-13 01:36:28,152 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:37:22] 2025-10-13 01:36:28,152 | INFO     | update_server=False
[2025-10-13 03:37:22] 2025-10-13 01:36:28,152 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:37:22] 2025-10-13 01:36:28,153 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:37:22] 2025-10-13 01:36:28,153 | INFO     | aborting loop
[2025-10-13 03:37:22] 2025-10-13 01:36:28,290 | INFO     | all payload control threads have been joined
[2025-10-13 03:37:22] 2025-10-13 01:36:28,765 | INFO     | all data control threads have been joined
[2025-10-13 03:37:22] 2025-10-13 01:36:28,898 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:37:22] 2025-10-13 01:36:28,980 | INFO     | all job control threads have been joined
[2025-10-13 03:37:22] 2025-10-13 01:36:29,158 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:37:22] 2025-10-13 01:36:29,159 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:37:22] 2025-10-13 01:36:29,235 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:37:22] 2025-10-13 01:36:29,296 | INFO     | [payload] control thread has finished
[2025-10-13 03:37:22] 2025-10-13 01:36:29,337 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:37:22] 2025-10-13 01:36:29,350 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:37:22] 2025-10-13 01:36:29,394 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:37:22] 2025-10-13 01:36:29,653 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:37:22] 2025-10-13 01:36:29,770 | INFO     | [data] control thread has finished
[2025-10-13 03:37:22] 2025-10-13 01:36:29,836 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:37:22] 2025-10-13 01:36:29,846 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:37:22] 2025-10-13 01:36:29,961 | INFO     | [job] validate thread has finished
[2025-10-13 03:37:22] 2025-10-13 01:36:29,986 | INFO     | [job] control thread has finished
[2025-10-13 03:37:22] 2025-10-13 01:36:30,153 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:37:22] 2025-10-13 01:36:30,591 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:37:22] 2025-10-13 01:36:30,842 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:37:22] 2025-10-13 01:36:30,905 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:37:22] 2025-10-13 01:36:33,244 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:37:22] 2025-10-13 01:36:44,043 [wrapper] supervise_pilot (15 min periods counter: 17)
[2025-10-13 03:37:22] 2025-10-13 01:36:57,497 | INFO     | PID=13443 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 03:37:22] 2025-10-13 01:36:57,497 | INFO     | .. there are 9 such processes running
[2025-10-13 03:37:22] 2025-10-13 01:36:57,497 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:37:22] 2025-10-13 01:36:57,498 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:37:22] 2025-10-13 01:36:57,498 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:37:22] 2025-10-13 01:37:12,771 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:37:22] 2025-10-13 01:37:13,399 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139781029447488)>', '<ExcThread(monitor, started 139780356556544)>']
[2025-10-13 03:37:22] 2025-10-13 01:37:13,593 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:37:22] 2025-10-13 01:37:13,593 | INFO     | [monitor] control thread has ended
[2025-10-13 03:37:22] 2025-10-13 01:37:18,425 | INFO     | all workflow threads have been joined
[2025-10-13 03:37:22] 2025-10-13 01:37:18,425 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:37:22] 2025-10-13 01:37:18,425 | INFO     | traces error code: 0
[2025-10-13 03:37:22] 2025-10-13 01:37:18,425 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:37:22] 2025-10-13 01:37:18,797 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:37:22] 2025-10-13 01:37:18,896 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:37:22] 2025-10-13 01:37:19,010 [wrapper] pilotpid: 13443
[2025-10-13 03:37:22] 2025-10-13 01:37:19,124 [wrapper] Pilot exit status: 0
[2025-10-13 03:37:22] 2025-10-13 01:37:19,436 [wrapper] pandaids: 6839774985
[2025-10-13 03:37:22] 2025-10-13 01:37:20,347 [wrapper] cleanup supervisor_pilot 32291 13444
[2025-10-13 03:37:22] 2025-10-13 01:37:20,422 [wrapper] Test setup, not cleaning
[2025-10-13 03:37:22] 2025-10-13 01:37:20,468 [wrapper] apfmon messages muted
[2025-10-13 03:37:22] 2025-10-13 01:37:20,554 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:37:22] 2025-10-13 01:37:20,621 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:37:22]  *** Error codes and diagnostics ***
[2025-10-13 03:37:22]     "exeErrorCode": 0,
[2025-10-13 03:37:22]     "exeErrorDiag": "",
[2025-10-13 03:37:22]     "pilotErrorCode": 0,
[2025-10-13 03:37:22]     "pilotErrorDiag": "",
[2025-10-13 03:37:22]  *** Listing of results directory ***
[2025-10-13 03:37:22] total 409460
[2025-10-13 03:37:22] -rw-r--r--. 1 boinc boinc    557409 Oct 12 10:37 pilot3.tar.gz
[2025-10-13 03:37:22] -rw-r--r--. 1 boinc boinc      5112 Oct 12 10:46 queuedata.json
[2025-10-13 03:37:22] -rwx------. 1 boinc boinc     36292 Oct 12 10:48 runpilot2-wrapper.sh
[2025-10-13 03:37:22] -rw-r--r--. 1 boinc boinc       100 Oct 12 23:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:37:22] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 23:32 run_atlas
[2025-10-13 03:37:22] -rw-r--r--. 1 boinc boinc       105 Oct 12 23:32 job.xml
[2025-10-13 03:37:22] -rw-r--r--. 1 boinc boinc      6389 Oct 12 23:32 init_data.xml
[2025-10-13 03:37:22] -rw-r--r--. 2 boinc boinc 220263542 Oct 12 23:32 EVNT.46676267._003551.pool.root.1
[2025-10-13 03:37:22] -rw-r--r--. 2 boinc boinc     15120 Oct 12 23:32 start_atlas.sh
[2025-10-13 03:37:22] drwxrwx--x. 2 boinc boinc        68 Oct 12 23:32 shared
[2025-10-13 03:37:22] -rw-r--r--. 2 boinc boinc    569682 Oct 12 23:32 input.tar.gz
[2025-10-13 03:37:22] -rw-r--r--. 1 boinc boinc         0 Oct 12 23:32 boinc_lockfile
[2025-10-13 03:37:22] -rw-r--r--. 1 boinc boinc      2550 Oct 12 23:33 pandaJob.out
[2025-10-13 03:37:22] -rw-------. 1 boinc boinc    975528 Oct 12 23:36 agis_schedconf.cvmfs.json
[2025-10-13 03:37:22] drwx------. 5 boinc boinc      4096 Oct 12 23:36 pilot3
[2025-10-13 03:37:22] -rw-------. 1 boinc boinc 190397757 Oct 13 03:33 HITS.46676269._074731.pool.root.1
[2025-10-13 03:37:22] -rw-r--r--. 1 boinc boinc       531 Oct 13 03:34 boinc_task_state.xml
[2025-10-13 03:37:22] -rw-------. 1 boinc boinc      1017 Oct 13 03:34 memory_monitor_summary.json
[2025-10-13 03:37:22] -rw-------. 1 boinc boinc   1560580 Oct 13 03:34 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:37:22] -rw-------. 1 boinc boinc    450377 Oct 13 03:34 log.46676269._074731.job.log.tgz.1
[2025-10-13 03:37:22] -rw-------. 1 boinc boinc      7781 Oct 13 03:36 heartbeat.json
[2025-10-13 03:37:22] -rw-------. 1 boinc boinc        95 Oct 13 03:36 pilot_heartbeat.json
[2025-10-13 03:37:22] -rw-r--r--. 1 boinc boinc      8192 Oct 13 03:36 boinc_mmap_file
[2025-10-13 03:37:22] -rw-r--r--. 1 boinc boinc        28 Oct 13 03:36 wrapper_checkpoint.txt
[2025-10-13 03:37:22] -rw-------. 1 boinc boinc      4884 Oct 13 03:37 pilotlog.txt
[2025-10-13 03:37:22] -rw-------. 1 boinc boinc   1920771 Oct 13 03:37 log.46676269._074731.job.log.1
[2025-10-13 03:37:22] -rw-------. 1 boinc boinc       357 Oct 13 03:37 output.list
[2025-10-13 03:37:22] -rw-r--r--. 1 boinc boinc       620 Oct 13 03:37 runtime_log
[2025-10-13 03:37:22] -rw-------. 1 boinc boinc   2385920 Oct 13 03:37 result.tar.gz
[2025-10-13 03:37:22] -rw-r--r--. 1 boinc boinc      8703 Oct 13 03:37 runtime_log.err
[2025-10-13 03:37:22] -rw-------. 1 boinc boinc       656 Oct 13 03:37 cXnMDmJw6R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0EjNDmFptsgm.diag
[2025-10-13 03:37:22] -rw-r--r--. 1 boinc boinc     20807 Oct 13 03:37 stderr.txt
[2025-10-13 03:37:22] HITS file was successfully produced:
[2025-10-13 03:37:22] -rw-------. 1 boinc boinc 190397757 Oct 13 03:33 shared/HITS.pool.root.1
[2025-10-13 03:37:22]  *** Contents of shared directory: ***
[2025-10-13 03:37:22] total 403948
[2025-10-13 03:37:22] -rw-r--r--. 2 boinc boinc 220263542 Oct 12 23:32 ATLAS.root_0
[2025-10-13 03:37:22] -rw-r--r--. 2 boinc boinc     15120 Oct 12 23:32 start_atlas.sh
[2025-10-13 03:37:22] -rw-r--r--. 2 boinc boinc    569682 Oct 12 23:32 input.tar.gz
[2025-10-13 03:37:22] -rw-------. 1 boinc boinc 190397757 Oct 13 03:33 HITS.pool.root.1
[2025-10-13 03:37:22] -rw-------. 1 boinc boinc   2385920 Oct 13 03:37 result.tar.gz
03:37:24 (9674): run_atlas exited; CPU time 52478.482570
03:37:24 (9674): called boinc_finish(0)

</stderr_txt>
]]>

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