Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:04:38 (784368): wrapper (7.7.26015): starting
09:04:38 (784368): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 09:04:38] Arguments: --nthreads 8
[2025-10-12 09:04:38] Threads: 8
[2025-10-12 09:04:38] Checking for CVMFS
[2025-10-12 09:04:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:04:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:04:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:04:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:04:41] 2.13.2.0 5359 5713 115160 151620 1 454 39024707 40960001 13068 16776704 0 9178907 99.882 2735542 36217 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 09:04:41] CVMFS is ok
[2025-10-12 09:04:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:04:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:04:41] Further information can be found at the LHC@home message board.
[2025-10-12 09:04:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:04:41] Checking for apptainer binary...
[2025-10-12 09:04:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:04:41] Running /usr/bin/apptainer --version
[2025-10-12 09:04:41] apptainer version 1.4.3-1.el9
[2025-10-12 09:04:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:04:42] c-210-35-2.aglt2.org
[2025-10-12 09:04:42] apptainer works
[2025-10-12 09:04:42] Set ATHENA_PROC_NUMBER=8
[2025-10-12 09:04:42] Set ATHENA_CORE_NUMBER=8
[2025-10-12 09:04:42] Starting ATLAS job with PandaID=6839774896
[2025-10-12 09:04:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 18:31:06]  *** The last 200 lines of the pilot log: ***
[2025-10-12 18:31:06] 2025-10-12 22:30:22,740 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 18:31:06] 2025-10-12 22:30:22,740 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 18:31:06] 2025-10-12 22:30:22,750 | INFO     | fitting pss+swap vs Time
[2025-10-12 18:31:06] 2025-10-12 22:30:22,751 | INFO     | sum of square deviations: 52438781093.25139
[2025-10-12 18:31:06] 2025-10-12 22:30:22,757 | INFO     | sum of deviations: 317414135522.982
[2025-10-12 18:31:06] 2025-10-12 22:30:22,757 | INFO     | mean x: 1760291350.3146474
[2025-10-12 18:31:06] 2025-10-12 22:30:22,758 | INFO     | mean y: 2458849.8047016277
[2025-10-12 18:31:06] 2025-10-12 22:30:22,758 | INFO     | -- intersect: -10652658328.35972
[2025-10-12 18:31:06] 2025-10-12 22:30:22,758 | INFO     | intersect: -10652658328.35972
[2025-10-12 18:31:06] 2025-10-12 22:30:22,758 | INFO     | chi2: 5.3000983364917005
[2025-10-12 18:31:06] 2025-10-12 22:30:22,759 | INFO     | sum of square deviations: 51029229814.38519
[2025-10-12 18:31:06] 2025-10-12 22:30:22,765 | INFO     | sum of deviations: 384284708444.12787
[2025-10-12 18:31:06] 2025-10-12 22:30:22,766 | INFO     | mean x: 1760291197.8156934
[2025-10-12 18:31:06] 2025-10-12 22:30:22,766 | INFO     | mean y: 2466041.4270072994
[2025-10-12 18:31:06] 2025-10-12 22:30:22,766 | INFO     | -- intersect: -13253720504.79195
[2025-10-12 18:31:06] 2025-10-12 22:30:22,766 | INFO     | intersect: -13253720504.79195
[2025-10-12 18:31:06] 2025-10-12 22:30:22,767 | INFO     | chi2: 3.833226981336251
[2025-10-12 18:31:06] 2025-10-12 22:30:22,767 | INFO     | current chi2=3.833226981336251 (change=27.676304514123736 %)
[2025-10-12 18:31:06] 2025-10-12 22:30:22,768 | INFO     | sum of square deviations: 49645000727.639114
[2025-10-12 18:31:06] 2025-10-12 22:30:22,774 | INFO     | sum of deviations: 379942242675.466
[2025-10-12 18:31:06] 2025-10-12 22:30:22,774 | INFO     | mean x: 1760291045.3075507
[2025-10-12 18:31:06] 2025-10-12 22:30:22,774 | INFO     | mean y: 2465563.0570902396
[2025-10-12 18:31:06] 2025-10-12 22:30:22,774 | INFO     | -- intersect: -13469362772.385792
[2025-10-12 18:31:06] 2025-10-12 22:30:22,774 | INFO     | intersect: -13469362772.385792
[2025-10-12 18:31:06] 2025-10-12 22:30:22,775 | INFO     | chi2: 3.8321269710308044
[2025-10-12 18:31:06] 2025-10-12 22:30:22,775 | INFO     | current chi2=3.8321269710308044 (change=0.028696717173355566 %)
[2025-10-12 18:31:06] 2025-10-12 22:30:22,775 | INFO     | right removable region: 542
[2025-10-12 18:31:06] 2025-10-12 22:30:22,776 | INFO     | sum of square deviations: 51029157407.7515
[2025-10-12 18:31:06] 2025-10-12 22:30:22,782 | INFO     | sum of deviations: 175007612703.12378
[2025-10-12 18:31:06] 2025-10-12 22:30:22,782 | INFO     | mean x: 1760291502.8175182
[2025-10-12 18:31:06] 2025-10-12 22:30:22,782 | INFO     | mean y: 2474232.841240876
[2025-10-12 18:31:06] 2025-10-12 22:30:22,782 | INFO     | -- intersect: -6034553012.348818
[2025-10-12 18:31:06] 2025-10-12 22:30:22,783 | INFO     | intersect: -6034553012.348818
[2025-10-12 18:31:06] 2025-10-12 22:30:22,783 | INFO     | chi2: 2.7128194391214207
[2025-10-12 18:31:06] 2025-10-12 22:30:22,783 | INFO     | current chi2=2.7128194391214207 (change=48.815677240488334 %)
[2025-10-12 18:31:06] 2025-10-12 22:30:22,784 | INFO     | sum of square deviations: 49645055999.88208
[2025-10-12 18:31:06] 2025-10-12 22:30:22,790 | INFO     | sum of deviations: 109243324179.90976
[2025-10-12 18:31:06] 2025-10-12 22:30:22,790 | INFO     | mean x: 1760291655.3186004
[2025-10-12 18:31:06] 2025-10-12 22:30:22,791 | INFO     | mean y: 2481479.197053407
[2025-10-12 18:31:06] 2025-10-12 22:30:22,791 | INFO     | -- intersect: -3871018269.773249
[2025-10-12 18:31:06] 2025-10-12 22:30:22,791 | INFO     | intersect: -3871018269.773249
[2025-10-12 18:31:06] 2025-10-12 22:30:22,791 | INFO     | chi2: 2.2420214798864597
[2025-10-12 18:31:06] 2025-10-12 22:30:22,792 | INFO     | current chi2=2.2420214798864597 (change=17.354563021984042 %)
[2025-10-12 18:31:06] 2025-10-12 22:30:22,792 | INFO     | left removable region: 20
[2025-10-12 18:31:06] 2025-10-12 22:30:22,793 | INFO     | sum of square deviations: 44104949943.27968
[2025-10-12 18:31:06] 2025-10-12 22:30:22,799 | INFO     | sum of deviations: 73734980142.27206
[2025-10-12 18:31:06] 2025-10-12 22:30:22,799 | INFO     | mean x: 1760291624.8007662
[2025-10-12 18:31:06] 2025-10-12 22:30:22,799 | INFO     | mean y: 2500485.8199233715
[2025-10-12 18:31:06] 2025-10-12 22:30:22,799 | INFO     | -- intersect: -2940368016.8359637
[2025-10-12 18:31:06] 2025-10-12 22:30:22,800 | INFO     | intersect: -2940368016.8359637
[2025-10-12 18:31:06] 2025-10-12 22:30:22,800 | INFO     | chi2: 0.1684086157714383
[2025-10-12 18:31:06] 2025-10-12 22:30:22,800 | INFO     | -- intersect: -2940368016.8359637
[2025-10-12 18:31:06] 2025-10-12 22:30:22,800 | INFO     | current memory leak: 1.67 B/s (using 522 data points, chi2=0.17)
[2025-10-12 18:31:06] 2025-10-12 22:30:22,801 | INFO     | could have reported an average CPU frequency of 2548 MHz (22 samples)
[2025-10-12 18:31:06] 2025-10-12 22:30:22,801 | INFO     | ..............................
[2025-10-12 18:31:06] 2025-10-12 22:30:22,802 | INFO     | . Timing measurements:
[2025-10-12 18:31:06] 2025-10-12 22:30:22,802 | INFO     | . get job = 0 s
[2025-10-12 18:31:06] 2025-10-12 22:30:22,802 | INFO     | . initial setup = 6 s
[2025-10-12 18:31:06] 2025-10-12 22:30:22,802 | INFO     | . payload setup = 46 s
[2025-10-12 18:31:06] 2025-10-12 22:30:22,802 | INFO     | . stage-in = 0 s
[2025-10-12 18:31:06] 2025-10-12 22:30:22,802 | INFO     | . payload execution = 33721 s
[2025-10-12 18:31:06] 2025-10-12 22:30:22,802 | INFO     | . stage-out = 3 s
[2025-10-12 18:31:06] 2025-10-12 22:30:22,802 | INFO     | . log creation = 0 s
[2025-10-12 18:31:06] 2025-10-12 22:30:22,802 | INFO     | ..............................
[2025-10-12 18:31:06] 2025-10-12 22:30:22,961 | INFO     | 
[2025-10-12 18:31:06] 2025-10-12 22:30:22,961 | INFO     | job summary report
[2025-10-12 18:31:06] 2025-10-12 22:30:22,962 | INFO     | --------------------------------------------------
[2025-10-12 18:31:06] 2025-10-12 22:30:22,962 | INFO     | PanDA job id: 6839774896
[2025-10-12 18:31:06] 2025-10-12 22:30:22,962 | INFO     | task id: 46676269
[2025-10-12 18:31:06] 2025-10-12 22:30:22,962 | INFO     | errors: (none)
[2025-10-12 18:31:06] 2025-10-12 22:30:22,962 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 18:31:06] 2025-10-12 22:30:22,962 | INFO     | pilot state: finished 
[2025-10-12 18:31:06] 2025-10-12 22:30:22,962 | INFO     | transexitcode: 0
[2025-10-12 18:31:06] 2025-10-12 22:30:22,962 | INFO     | exeerrorcode: 0
[2025-10-12 18:31:06] 2025-10-12 22:30:22,962 | INFO     | exeerrordiag: 
[2025-10-12 18:31:06] 2025-10-12 22:30:22,962 | INFO     | exitcode: 0
[2025-10-12 18:31:06] 2025-10-12 22:30:22,962 | INFO     | exitmsg: OK
[2025-10-12 18:31:06] 2025-10-12 22:30:22,962 | INFO     | cpuconsumptiontime: 49397 s
[2025-10-12 18:31:06] 2025-10-12 22:30:22,962 | INFO     | nevents: 400
[2025-10-12 18:31:06] 2025-10-12 22:30:22,962 | INFO     | neventsw: 0
[2025-10-12 18:31:06] 2025-10-12 22:30:22,962 | INFO     | pid: 796205
[2025-10-12 18:31:06] 2025-10-12 22:30:22,962 | INFO     | pgrp: 796205
[2025-10-12 18:31:06] 2025-10-12 22:30:22,963 | INFO     | corecount: 8
[2025-10-12 18:31:06] 2025-10-12 22:30:22,963 | INFO     | event service: False
[2025-10-12 18:31:06] 2025-10-12 22:30:22,963 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348913, 3: 2348913, 14: 2348941, 25: 2348969, 34: 2349387, 36: 2349415, 33771: 2389275, 33772: 2389274, 33777: 2398664, 33792: 
[2025-10-12 18:31:06] 2025-10-12 22:30:22,963 | INFO     | --------------------------------------------------
[2025-10-12 18:31:06] 2025-10-12 22:30:22,963 | INFO     | 
[2025-10-12 18:31:06] 2025-10-12 22:30:22,963 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-12 18:31:06] 2025-10-12 22:30:23,029 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 18:31:06] 2025-10-12 22:30:23,029 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 18:31:06] 2025-10-12 22:30:23,029 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 18:31:06] 2025-10-12 22:30:23,029 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 18:31:06] 2025-10-12 22:30:23,029 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 18:31:06] 2025-10-12 22:30:23,029 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 18:31:06] 2025-10-12 22:30:23,030 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 18:31:06] 2025-10-12 22:30:23,030 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 18:31:06] 2025-10-12 22:30:23,030 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 18:31:06] 2025-10-12 22:30:23,030 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 18:31:06] 2025-10-12 22:30:23,030 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 18:31:06] 2025-10-12 22:30:23,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 18:31:06] 2025-10-12 22:30:23,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 18:31:06] 2025-10-12 22:30:23,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 18:31:06] 2025-10-12 22:30:23,030 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 18:31:06] 2025-10-12 22:30:23,031 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 18:31:06] 2025-10-12 22:30:23,031 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 18:31:06] 2025-10-12 22:30:23,031 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 18:31:06] 2025-10-12 22:30:23,031 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 18:31:06] 2025-10-12 22:30:23,031 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 18:31:06] 2025-10-12 22:30:23,031 | INFO     | job 6839774896 has completed (purged errors)
[2025-10-12 18:31:06] 2025-10-12 22:30:23,031 | INFO     | overall cleanup function is called
[2025-10-12 18:31:06] 2025-10-12 22:30:24,040 | INFO     | --- collectZombieJob: --- 10, [796205]
[2025-10-12 18:31:06] 2025-10-12 22:30:24,041 | INFO     | zombie collector waiting for pid 796205
[2025-10-12 18:31:06] 2025-10-12 22:30:24,041 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 18:31:06] 2025-10-12 22:30:24,041 | INFO     | collected zombie processes
[2025-10-12 18:31:06] 2025-10-12 22:30:24,041 | INFO     | will attempt to kill all subprocesses of pid=796205
[2025-10-12 18:31:06] 2025-10-12 22:30:24,320 | INFO     | process IDs to be killed: [796205] (in reverse order)
[2025-10-12 18:31:06] 2025-10-12 22:30:24,434 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 18:31:06] 2025-10-12 22:30:24,435 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 18:31:06] 2025-10-12 22:30:24,446 | INFO     | did not find any defunct processes belonging to 796205
[2025-10-12 18:31:06] 2025-10-12 22:30:24,457 | INFO     | did not find any defunct processes belonging to 796205
[2025-10-12 18:31:06] 2025-10-12 22:30:24,457 | INFO     | ready for new job
[2025-10-12 18:31:06] 2025-10-12 22:30:24,457 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 18:31:06] 2025-10-12 22:30:24,461 | INFO     | ***************************************
[2025-10-12 18:31:06] 2025-10-12 22:30:24,461 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 18:31:06] 2025-10-12 22:30:24,461 | INFO     | ***************************************
[2025-10-12 18:31:06] 2025-10-12 22:30:24,461 | INFO     | 
[2025-10-12 18:31:06] 2025-10-12 22:30:24,464 | INFO     | architecture information:
[2025-10-12 18:31:06] 2025-10-12 22:30:24,465 | INFO     | executing command: cat /etc/os-release
[2025-10-12 18:31:06] 2025-10-12 22:30:24,493 | INFO     | cat /etc/os-release:
[2025-10-12 18:31:06] NAME="CentOS Linux"
[2025-10-12 18:31:06] VERSION="7 (Core)"
[2025-10-12 18:31:06] ID="centos"
[2025-10-12 18:31:06] ID_LIKE="rhel fedora"
[2025-10-12 18:31:06] VERSION_ID="7"
[2025-10-12 18:31:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 18:31:06] ANSI_COLOR="0;31"
[2025-10-12 18:31:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 18:31:06] HOME_URL="https://www.centos.org/"
[2025-10-12 18:31:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 18:31:06] 
[2025-10-12 18:31:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 18:31:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 18:31:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 18:31:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 18:31:06] 
[2025-10-12 18:31:06] 2025-10-12 22:30:24,494 | INFO     | ***************************************
[2025-10-12 18:31:06] 2025-10-12 22:30:24,997 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-12 18:31:06] 2025-10-12 22:30:25,028 | INFO     | sufficient remaining disk space (74347184128 B)
[2025-10-12 18:31:06] 2025-10-12 22:30:25,028 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 18:31:06] 2025-10-12 22:30:25,028 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 18:31:06] 2025-10-12 22:30:25,028 | INFO     | update_server=False
[2025-10-12 18:31:06] 2025-10-12 22:30:25,028 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 18:31:06] 2025-10-12 22:30:25,029 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:31:06] 2025-10-12 22:30:25,029 | INFO     | aborting loop
[2025-10-12 18:31:06] 2025-10-12 22:30:25,242 | INFO     | all payload control threads have been joined
[2025-10-12 18:31:06] 2025-10-12 22:30:25,628 | INFO     | all data control threads have been joined
[2025-10-12 18:31:06] 2025-10-12 22:30:25,730 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 18:31:06] 2025-10-12 22:30:25,851 | INFO     | all job control threads have been joined
[2025-10-12 18:31:06] 2025-10-12 22:30:26,034 | INFO     | [job] retrieve thread has finished
[2025-10-12 18:31:06] 2025-10-12 22:30:26,035 | INFO     | [job] job monitor thread has finished
[2025-10-12 18:31:06] 2025-10-12 22:30:26,184 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 18:31:06] 2025-10-12 22:30:26,189 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 18:31:06] 2025-10-12 22:30:26,248 | INFO     | [payload] control thread has finished
[2025-10-12 18:31:06] 2025-10-12 22:30:26,517 | INFO     | [payload] validate_post thread has finished
[2025-10-12 18:31:06] 2025-10-12 22:30:26,634 | INFO     | [data] control thread has finished
[2025-10-12 18:31:06] 2025-10-12 22:30:26,877 | INFO     | [job] control thread has finished
[2025-10-12 18:31:06] 2025-10-12 22:30:27,276 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 18:31:06] 2025-10-12 22:30:27,322 | INFO     | [payload] failed_post thread has finished
[2025-10-12 18:31:06] 2025-10-12 22:30:27,414 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 18:31:06] 2025-10-12 22:30:27,421 | INFO     | [data] copytool_in thread has finished
[2025-10-12 18:31:06] 2025-10-12 22:30:27,490 | INFO     | [job] validate thread has finished
[2025-10-12 18:31:06] 2025-10-12 22:30:27,737 | INFO     | [data] copytool_out thread has finished
[2025-10-12 18:31:06] 2025-10-12 22:30:27,910 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 18:31:06] 2025-10-12 22:30:28,916 | INFO     | [job] queue monitor thread has finished
[2025-10-12 18:31:06] 2025-10-12 22:30:31,425 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 18:31:06] 2025-10-12 22:30:35,430 | INFO     | job.realtimelogging is not enabled
[2025-10-12 18:31:06] 2025-10-12 22:30:36,435 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 18:31:06] 2025-10-12 22:30:56,054 | INFO     | PID=788334 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-12 18:31:06] 2025-10-12 22:30:56,055 | INFO     | .. there are 10 such processes running
[2025-10-12 18:31:06] 2025-10-12 22:30:56,056 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 18:31:06] 2025-10-12 22:30:56,056 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 18:31:06] 2025-10-12 22:30:56,056 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 18:31:06] 2025-10-12 22:30:59,357 | INFO     | [monitor] cgroup control has ended
[2025-10-12 18:31:06] 2025-10-12 22:31:00,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140216950802240)>', '<ExcThread(monitor, started 140216178304768)>']
[2025-10-12 18:31:06] 2025-10-12 22:31:01,086 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 18:31:06] 2025-10-12 22:31:01,086 | INFO     | [monitor] control thread has ended
[2025-10-12 18:31:06] 2025-10-12 22:31:05,795 | INFO     | all workflow threads have been joined
[2025-10-12 18:31:06] 2025-10-12 22:31:05,795 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 18:31:06] 2025-10-12 22:31:05,796 | INFO     | traces error code: 0
[2025-10-12 18:31:06] 2025-10-12 22:31:05,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 18:31:06] 2025-10-12 22:31:06,005 [wrapper] ==== pilot stdout END ====
[2025-10-12 18:31:06] 2025-10-12 22:31:06,010 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 18:31:06] 2025-10-12 22:31:06,013 [wrapper] pilotpid: 788334
[2025-10-12 18:31:06] 2025-10-12 22:31:06,017 [wrapper] Pilot exit status: 0
[2025-10-12 18:31:06] 2025-10-12 22:31:06,033 [wrapper] pandaids: 6839774896
[2025-10-12 18:31:06] 2025-10-12 22:31:06,095 [wrapper] cleanup supervisor_pilot 1589136 788335
[2025-10-12 18:31:06] 2025-10-12 22:31:06,099 [wrapper] Test setup, not cleaning
[2025-10-12 18:31:06] 2025-10-12 22:31:06,102 [wrapper] apfmon messages muted
[2025-10-12 18:31:06] 2025-10-12 22:31:06,105 [wrapper] ==== wrapper stdout END ====
[2025-10-12 18:31:06] 2025-10-12 22:31:06,113 [wrapper] ==== wrapper stderr END ====
[2025-10-12 18:31:06]  *** Error codes and diagnostics ***
[2025-10-12 18:31:06]     "exeErrorCode": 0,
[2025-10-12 18:31:06]     "exeErrorDiag": "",
[2025-10-12 18:31:06]     "pilotErrorCode": 0,
[2025-10-12 18:31:06]     "pilotErrorDiag": "",
[2025-10-12 18:31:06]  *** Listing of results directory ***
[2025-10-12 18:31:06] total 424388
[2025-10-12 18:31:06] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 04:37 pilot3.tar.gz
[2025-10-12 18:31:06] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 04:46 queuedata.json
[2025-10-12 18:31:06] -rwx------. 1 boincer umatlas     36292 Oct 12 04:46 runpilot2-wrapper.sh
[2025-10-12 18:31:06] -rw-r--r--. 1 boincer umatlas       100 Oct 12 09:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 18:31:06] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 09:04 run_atlas
[2025-10-12 18:31:06] -rw-r--r--. 1 boincer umatlas       105 Oct 12 09:04 job.xml
[2025-10-12 18:31:06] -rw-r--r--. 2 boincer umatlas 222805840 Oct 12 09:04 EVNT.46676267._003547.pool.root.1
[2025-10-12 18:31:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 09:04 start_atlas.sh
[2025-10-12 18:31:06] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 09:04 shared
[2025-10-12 18:31:06] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 09:04 input.tar.gz
[2025-10-12 18:31:06] -rw-r--r--. 1 boincer umatlas         0 Oct 12 09:04 boinc_lockfile
[2025-10-12 18:31:06] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 09:04 pandaJob.out
[2025-10-12 18:31:06] -rw-------. 1 boincer umatlas    975512 Oct 12 09:05 agis_schedconf.cvmfs.json
[2025-10-12 18:31:06] drwx------. 5 boincer umatlas      4096 Oct 12 09:05 pilot3
[2025-10-12 18:31:06] -rw-------. 1 boincer umatlas 197498288 Oct 12 18:27 HITS.46676269._074642.pool.root.1
[2025-10-12 18:31:06] -rw-r--r--. 1 boincer umatlas       531 Oct 12 18:27 boinc_task_state.xml
[2025-10-12 18:31:06] -rw-r--r--. 1 boincer umatlas      6839 Oct 12 18:28 init_data.xml
[2025-10-12 18:31:06] -rw-------. 1 boincer umatlas      1044 Oct 12 18:29 memory_monitor_summary.json
[2025-10-12 18:31:06] -rw-------. 1 boincer umatlas   1560580 Oct 12 18:30 agis_ddmendpoints.agis.ALL.json
[2025-10-12 18:31:06] -rw-------. 1 boincer umatlas    739837 Oct 12 18:30 log.46676269._074642.job.log.tgz.1
[2025-10-12 18:31:06] -rw-------. 1 boincer umatlas      7846 Oct 12 18:30 heartbeat.json
[2025-10-12 18:31:06] -rw-------. 1 boincer umatlas        95 Oct 12 18:30 pilot_heartbeat.json
[2025-10-12 18:31:06] -rw-------. 1 boincer umatlas      4895 Oct 12 18:31 pilotlog.txt
[2025-10-12 18:31:06] -rw-------. 1 boincer umatlas   4445766 Oct 12 18:31 log.46676269._074642.job.log.1
[2025-10-12 18:31:06] -rw-------. 1 boincer umatlas       357 Oct 12 18:31 output.list
[2025-10-12 18:31:06] -rw-r--r--. 1 boincer umatlas        28 Oct 12 18:31 wrapper_checkpoint.txt
[2025-10-12 18:31:06] -rw-r--r--. 1 boincer umatlas       620 Oct 12 18:31 runtime_log
[2025-10-12 18:31:06] -rw-------. 1 boincer umatlas   5201920 Oct 12 18:31 result.tar.gz
[2025-10-12 18:31:06] -rw-------. 1 boincer umatlas       660 Oct 12 18:31 uZ6KDmst6R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkDjNDm01c9bm.diag
[2025-10-12 18:31:06] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 18:31 runtime_log.err
[2025-10-12 18:31:06] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 18:31 boinc_mmap_file
[2025-10-12 18:31:06] -rw-r--r--. 1 boincer umatlas     21013 Oct 12 18:31 stderr.txt
[2025-10-12 18:31:06] HITS file was successfully produced:
[2025-10-12 18:31:06] -rw-------. 1 boincer umatlas 197498288 Oct 12 18:27 shared/HITS.pool.root.1
[2025-10-12 18:31:06]  *** Contents of shared directory: ***
[2025-10-12 18:31:06] total 416116
[2025-10-12 18:31:06] -rw-r--r--. 2 boincer umatlas 222805840 Oct 12 09:04 ATLAS.root_0
[2025-10-12 18:31:06] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 09:04 start_atlas.sh
[2025-10-12 18:31:06] -rw-r--r--. 2 boincer umatlas    569683 Oct 12 09:04 input.tar.gz
[2025-10-12 18:31:06] -rw-------. 1 boincer umatlas 197498288 Oct 12 18:27 HITS.pool.root.1
[2025-10-12 18:31:06] -rw-------. 1 boincer umatlas   5201920 Oct 12 18:31 result.tar.gz
18:31:28 (784368): run_atlas exited; CPU time 50140.286025
18:31:28 (784368): called boinc_finish(0)

</stderr_txt>
]]>

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