Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:03:32 (1349407): wrapper (7.7.26015): starting
09:03:32 (1349407): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 09:03:32] Arguments: --nthreads 8
[2025-10-12 09:03:32] Threads: 8
[2025-10-12 09:03:32] Checking for CVMFS
[2025-10-12 09:03:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:03:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:03:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:03:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:03:34] 2.13.2.0 189278 122899 209732 151620 0 292 33331977 40960000 11276 16776704 0 102841174 99.784 68501513 41733 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 09:03:34] CVMFS is ok
[2025-10-12 09:03:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:03:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:03:34] Further information can be found at the LHC@home message board.
[2025-10-12 09:03:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:03:34] Checking for apptainer binary...
[2025-10-12 09:03:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:03:34] Running /usr/bin/apptainer --version
[2025-10-12 09:03:34] apptainer version 1.4.3-1.el9
[2025-10-12 09:03:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:03:34] c-210-31-1.aglt2.org
[2025-10-12 09:03:34] apptainer works
[2025-10-12 09:03:34] Set ATHENA_PROC_NUMBER=8
[2025-10-12 09:03:34] Set ATHENA_CORE_NUMBER=8
[2025-10-12 09:03:34] Starting ATLAS job with PandaID=6839591936
[2025-10-12 09:03:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:53:08]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:53:08] 2025-10-12 15:52:31,878 | INFO     | sum of square deviations: 1223065014.1835465
[2025-10-12 11:53:08] 2025-10-12 15:52:31,880 | INFO     | sum of deviations: 21044101077.753162
[2025-10-12 11:53:08] 2025-10-12 15:52:31,880 | INFO     | mean x: 1760279487.71519
[2025-10-12 11:53:08] 2025-10-12 15:52:31,880 | INFO     | mean y: 2503373.7278481014
[2025-10-12 11:53:08] 2025-10-12 15:52:31,880 | INFO     | -- intersect: -30284929456.899143
[2025-10-12 11:53:08] 2025-10-12 15:52:31,880 | INFO     | intersect: -30284929456.899143
[2025-10-12 11:53:08] 2025-10-12 15:52:31,880 | INFO     | chi2: 0.21769115519372345
[2025-10-12 11:53:08] 2025-10-12 15:52:31,880 | INFO     | current chi2=0.21769115519372345 (change=91.73430355452086 %)
[2025-10-12 11:53:08] 2025-10-12 15:52:31,881 | INFO     | sum of square deviations: 1110587509.8823533
[2025-10-12 11:53:08] 2025-10-12 15:52:31,882 | INFO     | sum of deviations: 13804411121.176468
[2025-10-12 11:53:08] 2025-10-12 15:52:31,882 | INFO     | mean x: 1760279640.2156863
[2025-10-12 11:53:08] 2025-10-12 15:52:31,883 | INFO     | mean y: 2513118.843137255
[2025-10-12 11:53:08] 2025-10-12 15:52:31,883 | INFO     | -- intersect: -21877459081.04955
[2025-10-12 11:53:08] 2025-10-12 15:52:31,883 | INFO     | intersect: -21877459081.04955
[2025-10-12 11:53:08] 2025-10-12 15:52:31,883 | INFO     | chi2: 0.1552836874491989
[2025-10-12 11:53:08] 2025-10-12 15:52:31,883 | INFO     | current chi2=0.1552836874491989 (change=28.66789313924496 %)
[2025-10-12 11:53:08] 2025-10-12 15:52:31,884 | INFO     | sum of square deviations: 1005235628.5067581
[2025-10-12 11:53:08] 2025-10-12 15:52:31,885 | INFO     | sum of deviations: 4840454298.02703
[2025-10-12 11:53:08] 2025-10-12 15:52:31,885 | INFO     | mean x: 1760279792.7094595
[2025-10-12 11:53:08] 2025-10-12 15:52:31,885 | INFO     | mean y: 2526095.8378378376
[2025-10-12 11:53:08] 2025-10-12 15:52:31,885 | INFO     | -- intersect: -8473649684.966522
[2025-10-12 11:53:08] 2025-10-12 15:52:31,885 | INFO     | intersect: -8473649684.966522
[2025-10-12 11:53:08] 2025-10-12 15:52:31,886 | INFO     | chi2: 0.05229127329725611
[2025-10-12 11:53:08] 2025-10-12 15:52:31,886 | INFO     | current chi2=0.05229127329725611 (change=66.32532743378907 %)
[2025-10-12 11:53:08] 2025-10-12 15:52:31,886 | INFO     | sum of square deviations: 906768449.1188798
[2025-10-12 11:53:08] 2025-10-12 15:52:31,887 | INFO     | sum of deviations: 472384082.53846157
[2025-10-12 11:53:08] 2025-10-12 15:52:31,887 | INFO     | mean x: 1760279945.2027972
[2025-10-12 11:53:08] 2025-10-12 15:52:31,887 | INFO     | mean y: 2532767.153846154
[2025-10-12 11:53:08] 2025-10-12 15:52:31,888 | INFO     | -- intersect: -914491008.5779682
[2025-10-12 11:53:08] 2025-10-12 15:52:31,888 | INFO     | intersect: -914491008.5779682
[2025-10-12 11:53:08] 2025-10-12 15:52:31,888 | INFO     | chi2: 0.004689976118916187
[2025-10-12 11:53:08] 2025-10-12 15:52:31,888 | INFO     | current chi2=0.004689976118916187 (change=91.0310538964017 %)
[2025-10-12 11:53:08] 2025-10-12 15:52:31,888 | INFO     | sum of square deviations: 814934626.4057965
[2025-10-12 11:53:08] 2025-10-12 15:52:31,889 | INFO     | sum of deviations: -316390409.1304349
[2025-10-12 11:53:08] 2025-10-12 15:52:31,889 | INFO     | mean x: 1760280097.710145
[2025-10-12 11:53:08] 2025-10-12 15:52:31,889 | INFO     | mean y: 2534071.0217391304
[2025-10-12 11:53:08] 2025-10-12 15:52:31,889 | INFO     | -- intersect: 685945626.0749276
[2025-10-12 11:53:08] 2025-10-12 15:52:31,889 | INFO     | intersect: 685945626.0749276
[2025-10-12 11:53:08] 2025-10-12 15:52:31,890 | INFO     | chi2: 0.003584647954454579
[2025-10-12 11:53:08] 2025-10-12 15:52:31,890 | INFO     | current chi2=0.003584647954454579 (change=23.567884706351975 %)
[2025-10-12 11:53:08] 2025-10-12 15:52:31,890 | INFO     | left removable region: 50
[2025-10-12 11:53:08] 2025-10-12 15:52:31,890 | INFO     | sum of square deviations: 379907660.05607414
[2025-10-12 11:53:08] 2025-10-12 15:52:31,891 | INFO     | sum of deviations: 505340407.61682236
[2025-10-12 11:53:08] 2025-10-12 15:52:31,891 | INFO     | mean x: 1760280677.2149532
[2025-10-12 11:53:08] 2025-10-12 15:52:31,891 | INFO     | mean y: 2531879.3644859814
[2025-10-12 11:53:08] 2025-10-12 15:52:31,891 | INFO     | -- intersect: -2338934346.435027
[2025-10-12 11:53:08] 2025-10-12 15:52:31,891 | INFO     | intersect: -2338934346.435027
[2025-10-12 11:53:08] 2025-10-12 15:52:31,891 | INFO     | chi2: 0.0023302840848997107
[2025-10-12 11:53:08] 2025-10-12 15:52:31,891 | INFO     | -- intersect: -2338934346.435027
[2025-10-12 11:53:08] 2025-10-12 15:52:31,891 | INFO     | current memory leak: 1.33 B/s (using 107 data points, chi2=0.00)
[2025-10-12 11:53:08] 2025-10-12 15:52:31,892 | INFO     | could have reported an average CPU frequency of 2519 MHz (9 samples)
[2025-10-12 11:53:08] 2025-10-12 15:52:31,892 | INFO     | ..............................
[2025-10-12 11:53:08] 2025-10-12 15:52:31,892 | INFO     | . Timing measurements:
[2025-10-12 11:53:08] 2025-10-12 15:52:31,892 | INFO     | . get job = 0 s
[2025-10-12 11:53:08] 2025-10-12 15:52:31,892 | INFO     | . initial setup = 4 s
[2025-10-12 11:53:08] 2025-10-12 15:52:31,893 | INFO     | . payload setup = 40 s
[2025-10-12 11:53:08] 2025-10-12 15:52:31,893 | INFO     | . stage-in = 0 s
[2025-10-12 11:53:08] 2025-10-12 15:52:31,893 | INFO     | . payload execution = 9968 s
[2025-10-12 11:53:08] 2025-10-12 15:52:31,893 | INFO     | . stage-out = 1 s
[2025-10-12 11:53:08] 2025-10-12 15:52:31,893 | INFO     | . log creation = 0 s
[2025-10-12 11:53:08] 2025-10-12 15:52:31,893 | INFO     | ..............................
[2025-10-12 11:53:08] 2025-10-12 15:52:32,290 | INFO     | time since job start (10094s) is within the limit (172800.0s)
[2025-10-12 11:53:08] 2025-10-12 15:52:32,629 | INFO     | 
[2025-10-12 11:53:08] 2025-10-12 15:52:32,630 | INFO     | job summary report
[2025-10-12 11:53:08] 2025-10-12 15:52:32,630 | INFO     | --------------------------------------------------
[2025-10-12 11:53:08] 2025-10-12 15:52:32,630 | INFO     | PanDA job id: 6839591936
[2025-10-12 11:53:08] 2025-10-12 15:52:32,630 | INFO     | task id: 46676269
[2025-10-12 11:53:08] 2025-10-12 15:52:32,630 | INFO     | errors: (none)
[2025-10-12 11:53:08] 2025-10-12 15:52:32,630 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:53:08] 2025-10-12 15:52:32,630 | INFO     | pilot state: finished 
[2025-10-12 11:53:08] 2025-10-12 15:52:32,630 | INFO     | transexitcode: 0
[2025-10-12 11:53:08] 2025-10-12 15:52:32,630 | INFO     | exeerrorcode: 0
[2025-10-12 11:53:08] 2025-10-12 15:52:32,631 | INFO     | exeerrordiag: 
[2025-10-12 11:53:08] 2025-10-12 15:52:32,631 | INFO     | exitcode: 0
[2025-10-12 11:53:08] 2025-10-12 15:52:32,631 | INFO     | exitmsg: OK
[2025-10-12 11:53:08] 2025-10-12 15:52:32,631 | INFO     | cpuconsumptiontime: 48284 s
[2025-10-12 11:53:08] 2025-10-12 15:52:32,631 | INFO     | nevents: 400
[2025-10-12 11:53:08] 2025-10-12 15:52:32,631 | INFO     | neventsw: 0
[2025-10-12 11:53:08] 2025-10-12 15:52:32,631 | INFO     | pid: 1374854
[2025-10-12 11:53:08] 2025-10-12 15:52:32,631 | INFO     | pgrp: 1374854
[2025-10-12 11:53:08] 2025-10-12 15:52:32,631 | INFO     | corecount: 8
[2025-10-12 11:53:08] 2025-10-12 15:52:32,631 | INFO     | event service: False
[2025-10-12 11:53:08] 2025-10-12 15:52:32,631 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 25: 2349203, 34: 2349231, 10012: 2378008, 10013: 2378007, 10015: 2387117, 10031: 2387319}
[2025-10-12 11:53:08] 2025-10-12 15:52:32,632 | INFO     | --------------------------------------------------
[2025-10-12 11:53:08] 2025-10-12 15:52:32,632 | INFO     | 
[2025-10-12 11:53:08] 2025-10-12 15:52:32,632 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-12 11:53:08] 2025-10-12 15:52:32,678 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:53:08] 2025-10-12 15:52:32,678 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:53:08] 2025-10-12 15:52:32,678 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:53:08] 2025-10-12 15:52:32,678 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:53:08] 2025-10-12 15:52:32,678 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:53:08] 2025-10-12 15:52:32,679 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:53:08] 2025-10-12 15:52:32,679 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:53:08] 2025-10-12 15:52:32,679 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:53:08] 2025-10-12 15:52:32,679 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:53:08] 2025-10-12 15:52:32,679 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:53:08] 2025-10-12 15:52:32,679 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:53:08] 2025-10-12 15:52:32,679 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:53:08] 2025-10-12 15:52:32,679 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:53:08] 2025-10-12 15:52:32,679 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:53:08] 2025-10-12 15:52:32,679 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:53:08] 2025-10-12 15:52:32,679 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:53:08] 2025-10-12 15:52:32,679 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:53:08] 2025-10-12 15:52:32,680 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:53:08] 2025-10-12 15:52:32,680 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:53:08] 2025-10-12 15:52:32,680 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:53:08] 2025-10-12 15:52:32,680 | INFO     | job 6839591936 has completed (purged errors)
[2025-10-12 11:53:08] 2025-10-12 15:52:32,680 | INFO     | overall cleanup function is called
[2025-10-12 11:53:08] 2025-10-12 15:52:33,685 | INFO     | PID=1357936 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:53:08] 2025-10-12 15:52:33,685 | INFO     | .. there are 10 such processes running
[2025-10-12 11:53:08] 2025-10-12 15:52:33,692 | INFO     | --- collectZombieJob: --- 10, [1374854]
[2025-10-12 11:53:08] 2025-10-12 15:52:33,692 | INFO     | zombie collector waiting for pid 1374854
[2025-10-12 11:53:08] 2025-10-12 15:52:33,692 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:53:08] 2025-10-12 15:52:33,692 | INFO     | collected zombie processes
[2025-10-12 11:53:08] 2025-10-12 15:52:33,692 | INFO     | will attempt to kill all subprocesses of pid=1374854
[2025-10-12 11:53:08] 2025-10-12 15:52:34,101 | INFO     | process IDs to be killed: [1374854] (in reverse order)
[2025-10-12 11:53:08] 2025-10-12 15:52:34,203 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:53:08] 2025-10-12 15:52:34,204 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:53:08] 2025-10-12 15:52:34,217 | INFO     | did not find any defunct processes belonging to 1374854
[2025-10-12 11:53:08] 2025-10-12 15:52:34,227 | INFO     | did not find any defunct processes belonging to 1374854
[2025-10-12 11:53:08] 2025-10-12 15:52:34,227 | INFO     | ready for new job
[2025-10-12 11:53:08] 2025-10-12 15:52:34,227 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:53:08] 2025-10-12 15:52:34,229 | INFO     | ***************************************
[2025-10-12 11:53:08] 2025-10-12 15:52:34,230 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:53:08] 2025-10-12 15:52:34,230 | INFO     | ***************************************
[2025-10-12 11:53:08] 2025-10-12 15:52:34,230 | INFO     | 
[2025-10-12 11:53:08] 2025-10-12 15:52:34,233 | INFO     | architecture information:
[2025-10-12 11:53:08] 2025-10-12 15:52:34,234 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:53:08] 2025-10-12 15:52:34,276 | INFO     | cat /etc/os-release:
[2025-10-12 11:53:08] NAME="CentOS Linux"
[2025-10-12 11:53:08] VERSION="7 (Core)"
[2025-10-12 11:53:08] ID="centos"
[2025-10-12 11:53:08] ID_LIKE="rhel fedora"
[2025-10-12 11:53:08] VERSION_ID="7"
[2025-10-12 11:53:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:53:08] ANSI_COLOR="0;31"
[2025-10-12 11:53:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:53:08] HOME_URL="https://www.centos.org/"
[2025-10-12 11:53:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:53:08] 
[2025-10-12 11:53:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:53:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:53:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:53:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:53:08] 
[2025-10-12 11:53:08] 2025-10-12 15:52:34,277 | INFO     | ***************************************
[2025-10-12 11:53:08] 2025-10-12 15:52:34,783 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-12 11:53:08] 2025-10-12 15:52:34,814 | INFO     | sufficient remaining disk space (74182557696 B)
[2025-10-12 11:53:08] 2025-10-12 15:52:34,814 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:53:08] 2025-10-12 15:52:34,815 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:53:08] 2025-10-12 15:52:34,815 | INFO     | update_server=False
[2025-10-12 11:53:08] 2025-10-12 15:52:34,815 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:53:08] 2025-10-12 15:52:34,815 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:53:08] 2025-10-12 15:52:34,815 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:53:08] 2025-10-12 15:52:34,816 | INFO     | aborting loop
[2025-10-12 11:53:08] 2025-10-12 15:52:34,864 | INFO     | all job control threads have been joined
[2025-10-12 11:53:08] 2025-10-12 15:52:35,361 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:53:08] 2025-10-12 15:52:35,403 | INFO     | all payload control threads have been joined
[2025-10-12 11:53:08] 2025-10-12 15:52:35,510 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:53:08] 2025-10-12 15:52:35,822 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:53:08] 2025-10-12 15:52:35,826 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:53:08] 2025-10-12 15:52:35,859 | INFO     | all data control threads have been joined
[2025-10-12 11:53:08] 2025-10-12 15:52:35,871 | INFO     | [job] control thread has finished
[2025-10-12 11:53:08] 2025-10-12 15:52:36,195 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:53:08] 2025-10-12 15:52:36,310 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:53:08] 2025-10-12 15:52:36,387 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:53:08] 2025-10-12 15:52:36,410 | INFO     | [payload] control thread has finished
[2025-10-12 11:53:08] 2025-10-12 15:52:36,677 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:53:08] 2025-10-12 15:52:36,840 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:53:08] 2025-10-12 15:52:36,866 | INFO     | [data] control thread has finished
[2025-10-12 11:53:08] 2025-10-12 15:52:36,944 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:53:08] 2025-10-12 15:52:36,957 | INFO     | [job] validate thread has finished
[2025-10-12 11:53:08] 2025-10-12 15:52:37,192 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:53:08] 2025-10-12 15:52:37,214 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:53:08] 2025-10-12 15:52:38,198 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:53:08] 2025-10-12 15:52:39,519 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:53:08] 2025-10-12 15:52:45,397 | INFO     | job.realtimelogging is not enabled
[2025-10-12 11:53:08] 2025-10-12 15:52:46,404 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:53:08] 2025-10-12 15:52:47,483 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140629095470912)>', '<ExcThread(monitor, started 140628730029824)>']
[2025-10-12 11:53:08] 2025-10-12 15:52:52,508 | INFO     | all workflow threads have been joined
[2025-10-12 11:53:08] 2025-10-12 15:52:52,509 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:53:08] 2025-10-12 15:52:52,509 | INFO     | traces error code: 0
[2025-10-12 11:53:08] 2025-10-12 15:52:52,509 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:53:08] 2025-10-12 15:53:07,116 | INFO     | PID=1357936 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:53:08] 2025-10-12 15:53:07,116 | INFO     | .. there are 10 such processes running
[2025-10-12 11:53:08] 2025-10-12 15:53:07,117 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:53:08] 2025-10-12 15:53:07,117 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:53:08] 2025-10-12 15:53:07,117 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:53:08] 2025-10-12 15:53:07,118 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:53:08] 2025-10-12 15:53:07,118 | INFO     | [monitor] control thread has ended
[2025-10-12 11:53:08] 2025-10-12 15:53:07,370 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:53:08] 2025-10-12 15:53:07,421 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:53:08] 2025-10-12 15:53:07,469 [wrapper] pilotpid: 1357936
[2025-10-12 11:53:08] 2025-10-12 15:53:07,522 [wrapper] Pilot exit status: 0
[2025-10-12 11:53:08] 2025-10-12 15:53:07,700 [wrapper] pandaids: 6839591936
[2025-10-12 11:53:08] 2025-10-12 15:53:08,236 [wrapper] cleanup supervisor_pilot 1623731 1357937
[2025-10-12 11:53:08] 2025-10-12 15:53:08,283 [wrapper] Test setup, not cleaning
[2025-10-12 11:53:08] 2025-10-12 15:53:08,303 [wrapper] apfmon messages muted
[2025-10-12 11:53:08] 2025-10-12 15:53:08,320 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:53:08] 2025-10-12 15:53:08,354 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:53:08]  *** Error codes and diagnostics ***
[2025-10-12 11:53:08]     "exeErrorCode": 0,
[2025-10-12 11:53:08]     "exeErrorDiag": "",
[2025-10-12 11:53:08]     "pilotErrorCode": 0,
[2025-10-12 11:53:08]     "pilotErrorDiag": "",
[2025-10-12 11:53:08]  *** Listing of results directory ***
[2025-10-12 11:53:08] total 419984
[2025-10-12 11:53:08] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 02:14 pilot3.tar.gz
[2025-10-12 11:53:08] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 02:42 queuedata.json
[2025-10-12 11:53:08] -rwx------. 1 boincer umatlas     36292 Oct 12 02:42 runpilot2-wrapper.sh
[2025-10-12 11:53:08] -rw-r--r--. 1 boincer umatlas       100 Oct 12 09:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:53:08] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 09:03 run_atlas
[2025-10-12 11:53:08] -rw-r--r--. 1 boincer umatlas       105 Oct 12 09:03 job.xml
[2025-10-12 11:53:08] -rw-r--r--. 2 boincer umatlas 220942872 Oct 12 09:03 EVNT.46676267._004524.pool.root.1
[2025-10-12 11:53:08] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 09:03 start_atlas.sh
[2025-10-12 11:53:08] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 09:03 shared
[2025-10-12 11:53:08] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 09:03 input.tar.gz
[2025-10-12 11:53:08] -rw-r--r--. 1 boincer umatlas         0 Oct 12 09:03 boinc_lockfile
[2025-10-12 11:53:08] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 09:03 pandaJob.out
[2025-10-12 11:53:08] -rw-------. 1 boincer umatlas    975512 Oct 12 09:04 agis_schedconf.cvmfs.json
[2025-10-12 11:53:08] -rw-------. 1 boincer umatlas   1560580 Oct 12 09:04 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:53:08] drwx------. 5 boincer umatlas      4096 Oct 12 09:04 pilot3
[2025-10-12 11:53:08] -rw-r--r--. 1 boincer umatlas      6841 Oct 12 11:48 init_data.xml
[2025-10-12 11:53:08] -rw-------. 1 boincer umatlas 201616369 Oct 12 11:51 HITS.46676269._073038.pool.root.1
[2025-10-12 11:53:08] -rw-r--r--. 1 boincer umatlas       530 Oct 12 11:51 boinc_task_state.xml
[2025-10-12 11:53:08] -rw-------. 1 boincer umatlas      1045 Oct 12 11:52 memory_monitor_summary.json
[2025-10-12 11:53:08] -rw-------. 1 boincer umatlas    413247 Oct 12 11:52 log.46676269._073038.job.log.tgz.1
[2025-10-12 11:53:08] -rw-------. 1 boincer umatlas      7831 Oct 12 11:52 heartbeat.json
[2025-10-12 11:53:08] -rw-------. 1 boincer umatlas        95 Oct 12 11:53 pilot_heartbeat.json
[2025-10-12 11:53:08] -rw-------. 1 boincer umatlas       823 Oct 12 11:53 pilotlog.txt
[2025-10-12 11:53:08] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 11:53 boinc_mmap_file
[2025-10-12 11:53:08] -rw-r--r--. 1 boincer umatlas        27 Oct 12 11:53 wrapper_checkpoint.txt
[2025-10-12 11:53:08] -rw-------. 1 boincer umatlas   1387748 Oct 12 11:53 log.46676269._073038.job.log.1
[2025-10-12 11:53:08] -rw-------. 1 boincer umatlas       357 Oct 12 11:53 output.list
[2025-10-12 11:53:08] -rw-r--r--. 1 boincer umatlas       620 Oct 12 11:53 runtime_log
[2025-10-12 11:53:08] -rw-------. 1 boincer umatlas   1822720 Oct 12 11:53 result.tar.gz
[2025-10-12 11:53:08] -rw-r--r--. 1 boincer umatlas      8714 Oct 12 11:53 runtime_log.err
[2025-10-12 11:53:08] -rw-------. 1 boincer umatlas       656 Oct 12 11:53 ol5NDmLy4R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmTOTMDmjxLNgn.diag
[2025-10-12 11:53:08] -rw-r--r--. 1 boincer umatlas     21213 Oct 12 11:53 stderr.txt
[2025-10-12 11:53:09] HITS file was successfully produced:
[2025-10-12 11:53:09] -rw-------. 1 boincer umatlas 201616369 Oct 12 11:51 shared/HITS.pool.root.1
[2025-10-12 11:53:09]  *** Contents of shared directory: ***
[2025-10-12 11:53:09] total 415024
[2025-10-12 11:53:09] -rw-r--r--. 2 boincer umatlas 220942872 Oct 12 09:03 ATLAS.root_0
[2025-10-12 11:53:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 09:03 start_atlas.sh
[2025-10-12 11:53:09] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 09:03 input.tar.gz
[2025-10-12 11:53:09] -rw-------. 1 boincer umatlas 201616369 Oct 12 11:51 HITS.pool.root.1
[2025-10-12 11:53:09] -rw-------. 1 boincer umatlas   1822720 Oct 12 11:53 result.tar.gz
11:53:10 (1349407): run_atlas exited; CPU time 48531.454494
11:53:10 (1349407): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN