Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:43:19 (3741074): wrapper (7.7.26015): starting
05:43:19 (3741074): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 05:43:19] Arguments: --nthreads 6
[2025-10-13 05:43:19] Threads: 6
[2025-10-13 05:43:19] Checking for CVMFS
[2025-10-13 05:43:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:43:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:43:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:43:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:43:20] 2.12.7.0 249871 6366 95380 151636 2 187 13941574 20971521 607 130560 0 10856234 99.996 221833 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-13 05:43:20] CVMFS is ok
[2025-10-13 05:43:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:43:20] Checking for apptainer binary...
[2025-10-13 05:43:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:43:20] Running /usr/bin/apptainer --version
[2025-10-13 05:43:20] apptainer version 1.4.0-1.el9
[2025-10-13 05:43:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:43:20] testio005
[2025-10-13 05:43:20] apptainer works
[2025-10-13 05:43:20] Set ATHENA_PROC_NUMBER=6
[2025-10-13 05:43:20] Set ATHENA_CORE_NUMBER=6
[2025-10-13 05:43:20] Starting ATLAS job with PandaID=6838454790
[2025-10-13 05:43:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:15:42]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:15:42]  replicas=None
[2025-10-13 07:15:42]  scope=mc23_13p6TeV
[2025-10-13 07:15:42]  status=None
[2025-10-13 07:15:42]  status_code=0
[2025-10-13 07:15:42]  storage_token=
[2025-10-13 07:15:42]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6838454790/log.46676269._059476.job.log.tgz.1
[2025-10-13 07:15:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1a/34/log.46676269._059476.job.log.tgz.1
[2025-10-13 07:15:42]  workdir=None
[2025-10-13 07:15:42] ]
[2025-10-13 07:15:42] 2025-10-12 22:14:51,189 | INFO     | time since job start (5482s) is within the limit (172800.0s)
[2025-10-13 07:15:42] 2025-10-12 22:14:51,200 | INFO     | transferring file log.46676269._059476.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6838454790/log.46676269._059476.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 07:15:42] 2025-10-12 22:14:51,200 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6838454790/log.46676269._059476.job.log.tgz.1 /var/lib/boinc/slots/0/log.46676269._059476.job
[2025-10-13 07:15:42] 2025-10-12 22:14:51,211 | INFO     | adding to output.list: log.46676269._059476.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1a/34/log.46676269._059476.job.log.tg
[2025-10-13 07:15:42] 2025-10-12 22:14:51,212 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 07:15:42] 2025-10-12 22:14:51,212 | INFO     | summary of transferred files:
[2025-10-13 07:15:42] 2025-10-12 22:14:51,212 | INFO     |  -- lfn=log.46676269._059476.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 07:15:42] 2025-10-12 22:14:51,212 | INFO     | stage-out finished correctly
[2025-10-13 07:15:42] 2025-10-12 22:14:51,271 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 07:15:42] 2025-10-12 22:14:51,736 | INFO     | monitor loop #408: job 0:6838454790 is in state 'finished'
[2025-10-13 07:15:42] 2025-10-12 22:14:51,736 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:15:42] 2025-10-12 22:14:53,205 | INFO     | time since job start (5484s) is within the limit (172800.0s)
[2025-10-13 07:15:42] 2025-10-12 22:14:54,170 | INFO     | job 6838454790 has state=finished
[2025-10-13 07:15:42] 2025-10-12 22:14:54,170 | INFO     | preparing for final server update for job 6838454790 in state='finished'
[2025-10-13 07:15:42] 2025-10-12 22:14:54,170 | INFO     | this job has now completed (state=finished)
[2025-10-13 07:15:42] 2025-10-12 22:14:54,170 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 07:15:42] 2025-10-12 22:14:54,170 | INFO     | log transfer has been attempted: DONE
[2025-10-13 07:15:42] 2025-10-12 22:14:54,170 | INFO     | job 6838454790 has finished - writing final server update
[2025-10-13 07:15:42] 2025-10-12 22:14:54,171 | INFO     | total number of processed events: 400 (read)
[2025-10-13 07:15:42] 2025-10-12 22:14:54,171 | INFO     | executing command: lscpu
[2025-10-13 07:15:42] 2025-10-12 22:14:54,188 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 07:15:42] 2025-10-12 22:14:54,239 | INFO     | monitor loop #409: job 0:6838454790 is in state 'finished'
[2025-10-13 07:15:42] 2025-10-12 22:14:54,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:15:42] 2025-10-12 22:14:55,211 | INFO     | time since job start (5486s) is within the limit (172800.0s)
[2025-10-13 07:15:42] 2025-10-12 22:14:56,742 | INFO     | monitor loop #410: job 0:6838454790 is in state 'finished'
[2025-10-13 07:15:42] 2025-10-12 22:14:56,742 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:15:42] 2025-10-12 22:14:57,215 | INFO     | time since job start (5488s) is within the limit (172800.0s)
[2025-10-13 07:15:42] 2025-10-12 22:14:57,817 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 07:15:42] 2025-10-12 22:14:57,819 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3316.2225625
[2025-10-13 07:15:42] 2025-10-12 22:14:57,821 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6838454790/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:15:42] 2025-10-12 22:14:57,822 | INFO     | extracted standard info from prmon json
[2025-10-13 07:15:42] 2025-10-12 22:14:57,822 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:15:42] 2025-10-12 22:14:57,822 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:15:42] 2025-10-12 22:14:57,822 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:15:42] 2025-10-12 22:14:57,822 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:15:42] 2025-10-12 22:14:57,823 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:15:42] 2025-10-12 22:14:57,823 | INFO     | sum of square deviations: 177275882.0
[2025-10-13 07:15:42] 2025-10-12 22:14:57,824 | INFO     | sum of deviations: -6726312010.0
[2025-10-13 07:15:42] 2025-10-12 22:14:57,824 | INFO     | mean x: 1760304636.0
[2025-10-13 07:15:42] 2025-10-12 22:14:57,824 | INFO     | mean y: 2515474.939759036
[2025-10-13 07:15:42] 2025-10-12 22:14:57,824 | INFO     | -- intersect: 66793091162.982185
[2025-10-13 07:15:42] 2025-10-12 22:14:57,824 | INFO     | intersect: 66793091162.982185
[2025-10-13 07:15:42] 2025-10-12 22:14:57,824 | INFO     | chi2: 0.05103424848723169
[2025-10-13 07:15:42] 2025-10-12 22:14:57,824 | INFO     | -- intersect: 66793091162.982185
[2025-10-13 07:15:42] 2025-10-12 22:14:57,824 | INFO     | current memory leak: -37.94 B/s (using 83 data points, chi2=0.05)
[2025-10-13 07:15:42] 2025-10-12 22:14:57,824 | INFO     | could have reported an average CPU frequency of 3324 MHz (6 samples)
[2025-10-13 07:15:42] 2025-10-12 22:14:57,824 | INFO     | ..............................
[2025-10-13 07:15:42] 2025-10-12 22:14:57,824 | INFO     | . Timing measurements:
[2025-10-13 07:15:42] 2025-10-12 22:14:57,824 | INFO     | . get job = 0 s
[2025-10-13 07:15:42] 2025-10-12 22:14:57,824 | INFO     | . initial setup = 4 s
[2025-10-13 07:15:42] 2025-10-12 22:14:57,825 | INFO     | . payload setup = 3 s
[2025-10-13 07:15:42] 2025-10-12 22:14:57,825 | INFO     | . stage-in = 0 s
[2025-10-13 07:15:42] 2025-10-12 22:14:57,825 | INFO     | . payload execution = 5460 s
[2025-10-13 07:15:42] 2025-10-12 22:14:57,825 | INFO     | . stage-out = 0 s
[2025-10-13 07:15:42] 2025-10-12 22:14:57,825 | INFO     | . log creation = 0 s
[2025-10-13 07:15:42] 2025-10-12 22:14:57,825 | INFO     | ..............................
[2025-10-13 07:15:42] 2025-10-12 22:14:57,885 | INFO     | 
[2025-10-13 07:15:42] 2025-10-12 22:14:57,885 | INFO     | job summary report
[2025-10-13 07:15:42] 2025-10-12 22:14:57,885 | INFO     | --------------------------------------------------
[2025-10-13 07:15:42] 2025-10-12 22:14:57,885 | INFO     | PanDA job id: 6838454790
[2025-10-13 07:15:42] 2025-10-12 22:14:57,885 | INFO     | task id: 46676269
[2025-10-13 07:15:42] 2025-10-12 22:14:57,885 | INFO     | errors: (none)
[2025-10-13 07:15:42] 2025-10-12 22:14:57,885 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:15:42] 2025-10-12 22:14:57,885 | INFO     | pilot state: finished 
[2025-10-13 07:15:42] 2025-10-12 22:14:57,885 | INFO     | transexitcode: 0
[2025-10-13 07:15:42] 2025-10-12 22:14:57,885 | INFO     | exeerrorcode: 0
[2025-10-13 07:15:42] 2025-10-12 22:14:57,885 | INFO     | exeerrordiag: 
[2025-10-13 07:15:42] 2025-10-12 22:14:57,885 | INFO     | exitcode: 0
[2025-10-13 07:15:42] 2025-10-12 22:14:57,885 | INFO     | exitmsg: OK
[2025-10-13 07:15:42] 2025-10-12 22:14:57,885 | INFO     | cpuconsumptiontime: 30416 s
[2025-10-13 07:15:42] 2025-10-12 22:14:57,885 | INFO     | nevents: 400
[2025-10-13 07:15:42] 2025-10-12 22:14:57,885 | INFO     | neventsw: 0
[2025-10-13 07:15:42] 2025-10-12 22:14:57,885 | INFO     | pid: 3751594
[2025-10-13 07:15:42] 2025-10-12 22:14:57,886 | INFO     | pgrp: 3751594
[2025-10-13 07:15:42] 2025-10-12 22:14:57,886 | INFO     | corecount: 6
[2025-10-13 07:15:42] 2025-10-12 22:14:57,886 | INFO     | event service: False
[2025-10-13 07:15:42] 2025-10-12 22:14:57,886 | INFO     | sizes: {0: 2348857, 3: 2349119, 11: 2349147, 5467: 2375774, 5468: 2384828, 5475: 2384966}
[2025-10-13 07:15:42] 2025-10-12 22:14:57,886 | INFO     | --------------------------------------------------
[2025-10-13 07:15:42] 2025-10-12 22:14:57,886 | INFO     | 
[2025-10-13 07:15:42] 2025-10-12 22:14:57,886 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 07:15:42] 2025-10-12 22:14:57,898 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:15:42] 2025-10-12 22:14:57,898 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:15:42] 2025-10-12 22:14:57,898 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:15:42] 2025-10-12 22:14:57,898 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:15:42] 2025-10-12 22:14:57,898 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:15:42] 2025-10-12 22:14:57,898 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:15:42] 2025-10-12 22:14:57,898 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:15:42] 2025-10-12 22:14:57,898 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:15:42] 2025-10-12 22:14:57,898 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:15:42] 2025-10-12 22:14:57,898 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:15:42] 2025-10-12 22:14:57,898 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:15:42] 2025-10-12 22:14:57,898 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:15:42] 2025-10-12 22:14:57,898 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:15:42] 2025-10-12 22:14:57,898 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:15:42] 2025-10-12 22:14:57,899 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:15:42] 2025-10-12 22:14:57,899 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:15:42] 2025-10-12 22:14:57,899 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:15:42] 2025-10-12 22:14:57,899 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:15:42] 2025-10-12 22:14:57,899 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:15:42] 2025-10-12 22:14:57,899 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:15:42] 2025-10-12 22:14:57,899 | INFO     | job 6838454790 has completed (purged errors)
[2025-10-13 07:15:42] 2025-10-12 22:14:57,899 | INFO     | overall cleanup function is called
[2025-10-13 07:15:42] 2025-10-12 22:14:58,906 | INFO     | --- collectZombieJob: --- 10, [3751594]
[2025-10-13 07:15:42] 2025-10-12 22:14:58,906 | INFO     | zombie collector waiting for pid 3751594
[2025-10-13 07:15:42] 2025-10-12 22:14:58,906 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:15:42] 2025-10-12 22:14:58,906 | INFO     | collected zombie processes
[2025-10-13 07:15:42] 2025-10-12 22:14:58,906 | INFO     | will attempt to kill all subprocesses of pid=3751594
[2025-10-13 07:15:42] 2025-10-12 22:14:58,971 | INFO     | process IDs to be killed: [3751594] (in reverse order)
[2025-10-13 07:15:42] 2025-10-12 22:14:59,003 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:15:42] 2025-10-12 22:14:59,003 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:15:42] 2025-10-12 22:14:59,005 | INFO     | did not find any defunct processes belonging to 3751594
[2025-10-13 07:15:42] 2025-10-12 22:14:59,007 | INFO     | did not find any defunct processes belonging to 3751594
[2025-10-13 07:15:42] 2025-10-12 22:14:59,008 | INFO     | ready for new job
[2025-10-13 07:15:42] 2025-10-12 22:14:59,008 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:15:42] 2025-10-12 22:14:59,009 | INFO     | ***************************************
[2025-10-13 07:15:42] 2025-10-12 22:14:59,009 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:15:42] 2025-10-12 22:14:59,009 | INFO     | ***************************************
[2025-10-13 07:15:42] 2025-10-12 22:14:59,009 | INFO     | 
[2025-10-13 07:15:42] 2025-10-12 22:14:59,009 | INFO     | architecture information:
[2025-10-13 07:15:42] 2025-10-12 22:14:59,010 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:15:42] 2025-10-12 22:14:59,019 | INFO     | cat /etc/os-release:
[2025-10-13 07:15:42] NAME="CentOS Linux"
[2025-10-13 07:15:42] VERSION="7 (Core)"
[2025-10-13 07:15:42] ID="centos"
[2025-10-13 07:15:42] ID_LIKE="rhel fedora"
[2025-10-13 07:15:42] VERSION_ID="7"
[2025-10-13 07:15:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:15:42] ANSI_COLOR="0;31"
[2025-10-13 07:15:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:15:42] HOME_URL="https://www.centos.org/"
[2025-10-13 07:15:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:15:42] 
[2025-10-13 07:15:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:15:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:15:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:15:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:15:42] 
[2025-10-13 07:15:42] 2025-10-12 22:14:59,019 | INFO     | ***************************************
[2025-10-13 07:15:42] 2025-10-12 22:14:59,522 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 07:15:42] 2025-10-12 22:14:59,534 | INFO     | sufficient remaining disk space (96479477760 B)
[2025-10-13 07:15:42] 2025-10-12 22:14:59,534 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:15:42] 2025-10-12 22:14:59,534 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:15:42] 2025-10-12 22:14:59,534 | INFO     | update_server=False
[2025-10-13 07:15:42] 2025-10-12 22:14:59,534 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:15:42] 2025-10-12 22:14:59,534 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:15:42] 2025-10-12 22:14:59,535 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:15:42] 2025-10-12 22:14:59,646 | INFO     | all payload control threads have been joined
[2025-10-13 07:15:42] 2025-10-12 22:15:00,251 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:15:42] 2025-10-12 22:15:00,251 | INFO     | aborting loop
[2025-10-13 07:15:42] 2025-10-12 22:15:00,478 | INFO     | all data control threads have been joined
[2025-10-13 07:15:42] 2025-10-12 22:15:00,540 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:15:42] 2025-10-12 22:15:00,540 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:15:42] 2025-10-12 22:15:00,638 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:15:42] 2025-10-12 22:15:00,638 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:15:42] 2025-10-12 22:15:00,651 | INFO     | [payload] control thread has finished
[2025-10-13 07:15:42] 2025-10-12 22:15:00,874 | INFO     | all job control threads have been joined
[2025-10-13 07:15:42] 2025-10-12 22:15:00,888 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:15:42] 2025-10-12 22:15:01,257 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:15:42] 2025-10-12 22:15:01,280 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:15:42] 2025-10-12 22:15:01,484 | INFO     | [data] control thread has finished
[2025-10-13 07:15:42] 2025-10-12 22:15:01,540 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:15:42] 2025-10-12 22:15:01,560 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:15:42] 2025-10-12 22:15:01,786 | INFO     | [job] validate thread has finished
[2025-10-13 07:15:42] 2025-10-12 22:15:01,835 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:15:42] 2025-10-12 22:15:01,880 | INFO     | [job] control thread has finished
[2025-10-13 07:15:42] 2025-10-12 22:15:02,024 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:15:42] 2025-10-12 22:15:02,024 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:15:42] 2025-10-12 22:15:05,842 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:15:42] 2025-10-12 22:15:30,320 | INFO     | PID=3744853 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:15:42] 2025-10-12 22:15:30,320 | INFO     | .. there are 2 such processes running
[2025-10-13 07:15:42] 2025-10-12 22:15:30,320 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:15:42] 2025-10-12 22:15:30,320 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:15:42] 2025-10-12 22:15:30,320 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:15:42] 2025-10-12 22:15:36,740 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:15:42] 2025-10-12 22:15:36,868 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140177535084352)>', '<ExcThread(monitor, started 140177037051648)>']
[2025-10-13 07:15:42] 2025-10-12 22:15:37,355 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:15:42] 2025-10-12 22:15:37,356 | INFO     | [monitor] control thread has ended
[2025-10-13 07:15:42] 2025-10-12 22:15:41,894 | INFO     | all workflow threads have been joined
[2025-10-13 07:15:42] 2025-10-12 22:15:41,894 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:15:42] 2025-10-12 22:15:41,894 | INFO     | traces error code: 0
[2025-10-13 07:15:42] 2025-10-12 22:15:41,894 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:15:42] 2025-10-12 22:15:41,956 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:15:42] 2025-10-12 22:15:41,958 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:15:42] 2025-10-12 22:15:41,960 [wrapper] pilotpid: 3744853
[2025-10-13 07:15:42] 2025-10-12 22:15:41,961 [wrapper] Pilot exit status: 0
[2025-10-13 07:15:42] 2025-10-12 22:15:41,968 [wrapper] pandaids: 6838454790
[2025-10-13 07:15:42] 2025-10-12 22:15:41,989 [wrapper] cleanup supervisor_pilot 3787846 3744854
[2025-10-13 07:15:42] 2025-10-12 22:15:41,991 [wrapper] Test setup, not cleaning
[2025-10-13 07:15:42] 2025-10-12 22:15:41,993 [wrapper] apfmon messages muted
[2025-10-13 07:15:42] 2025-10-12 22:15:41,994 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:15:42] 2025-10-12 22:15:41,996 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:15:42]  *** Error codes and diagnostics ***
[2025-10-13 07:15:42]     "exeErrorCode": 0,
[2025-10-13 07:15:42]     "exeErrorDiag": "",
[2025-10-13 07:15:42]     "pilotErrorCode": 0,
[2025-10-13 07:15:42]     "pilotErrorDiag": "",
[2025-10-13 07:15:42]  *** Listing of results directory ***
[2025-10-13 07:15:42] total 412136
[2025-10-13 07:15:42] -rw-r--r--. 1 boinc boinc    557409 Oct 11 23:01 pilot3.tar.gz
[2025-10-13 07:15:42] -rw-r--r--. 1 boinc boinc      5112 Oct 11 23:50 queuedata.json
[2025-10-13 07:15:42] -rwx------. 1 boinc boinc     36292 Oct 11 23:50 runpilot2-wrapper.sh
[2025-10-13 07:15:42] -rw-r--r--. 1 boinc boinc       100 Oct 13 05:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:15:42] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 05:43 run_atlas
[2025-10-13 07:15:42] -rw-r--r--. 1 boinc boinc       105 Oct 13 05:43 job.xml
[2025-10-13 07:15:42] -rw-r--r--. 2 boinc boinc 222181755 Oct 13 05:43 EVNT.46676267._002400.pool.root.1
[2025-10-13 07:15:42] -rw-r--r--. 2 boinc boinc     15120 Oct 13 05:43 start_atlas.sh
[2025-10-13 07:15:42] drwxrwx--x. 2 boinc boinc        68 Oct 13 05:43 shared
[2025-10-13 07:15:42] -rw-r--r--. 2 boinc boinc    569681 Oct 13 05:43 input.tar.gz
[2025-10-13 07:15:42] -rw-r--r--. 1 boinc boinc      9362 Oct 13 05:43 init_data.xml
[2025-10-13 07:15:42] -rw-r--r--. 1 boinc boinc         0 Oct 13 05:43 boinc_lockfile
[2025-10-13 07:15:42] -rw-r--r--. 1 boinc boinc      2550 Oct 13 05:43 pandaJob.out
[2025-10-13 07:15:42] -rw-------. 1 boinc boinc    975536 Oct 13 05:43 agis_schedconf.cvmfs.json
[2025-10-13 07:15:42] -rw-------. 1 boinc boinc   1560580 Oct 13 05:43 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:15:42] drwx------. 5 boinc boinc      4096 Oct 13 05:43 pilot3
[2025-10-13 07:15:42] -rw-------. 1 boinc boinc 193754857 Oct 13 07:14 HITS.46676269._059476.pool.root.1
[2025-10-13 07:15:42] -rw-r--r--. 1 boinc boinc       529 Oct 13 07:14 boinc_task_state.xml
[2025-10-13 07:15:42] -rw-------. 1 boinc boinc      1018 Oct 13 07:14 memory_monitor_summary.json
[2025-10-13 07:15:42] -rw-------. 1 boinc boinc    295192 Oct 13 07:14 log.46676269._059476.job.log.tgz.1
[2025-10-13 07:15:42] -rw-------. 1 boinc boinc      7753 Oct 13 07:14 heartbeat.json
[2025-10-13 07:15:42] -rw-r--r--. 1 boinc boinc      8192 Oct 13 07:15 boinc_mmap_file
[2025-10-13 07:15:42] -rw-r--r--. 1 boinc boinc        27 Oct 13 07:15 wrapper_checkpoint.txt
[2025-10-13 07:15:42] -rw-------. 1 boinc boinc        95 Oct 13 07:15 pilot_heartbeat.json
[2025-10-13 07:15:42] -rw-------. 1 boinc boinc      4823 Oct 13 07:15 pilotlog.txt
[2025-10-13 07:15:42] -rw-------. 1 boinc boinc    801642 Oct 13 07:15 log.46676269._059476.job.log.1
[2025-10-13 07:15:42] -rw-------. 1 boinc boinc       357 Oct 13 07:15 output.list
[2025-10-13 07:15:42] -rw-r--r--. 1 boinc boinc       620 Oct 13 07:15 runtime_log
[2025-10-13 07:15:42] -rw-------. 1 boinc boinc   1116160 Oct 13 07:15 result.tar.gz
[2025-10-13 07:15:42] -rw-r--r--. 1 boinc boinc      8661 Oct 13 07:15 runtime_log.err
[2025-10-13 07:15:42] -rw-------. 1 boinc boinc       642 Oct 13 07:15 OpzMDmw6pR8n9Rq4apOajLDm4fhM0noT9bVof3QYDmq4RMDmwO5LLo.diag
[2025-10-13 07:15:42] -rw-r--r--. 1 boinc boinc     21506 Oct 13 07:15 stderr.txt
[2025-10-13 07:15:42] HITS file was successfully produced:
[2025-10-13 07:15:42] -rw-------. 1 boinc boinc 193754857 Oct 13 07:14 shared/HITS.pool.root.1
[2025-10-13 07:15:42]  *** Contents of shared directory: ***
[2025-10-13 07:15:42] total 407860
[2025-10-13 07:15:42] -rw-r--r--. 2 boinc boinc 222181755 Oct 13 05:43 ATLAS.root_0
[2025-10-13 07:15:42] -rw-r--r--. 2 boinc boinc     15120 Oct 13 05:43 start_atlas.sh
[2025-10-13 07:15:42] -rw-r--r--. 2 boinc boinc    569681 Oct 13 05:43 input.tar.gz
[2025-10-13 07:15:42] -rw-------. 1 boinc boinc 193754857 Oct 13 07:14 HITS.pool.root.1
[2025-10-13 07:15:42] -rw-------. 1 boinc boinc   1116160 Oct 13 07:15 result.tar.gz
07:15:43 (3741074): run_atlas exited; CPU time 30473.732760
07:15:43 (3741074): called boinc_finish(0)

</stderr_txt>
]]>

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