Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:57:12 (3175317): wrapper (7.7.26015): starting
21:57:12 (3175317): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 21:57:12] Arguments: --nthreads 8
[2025-10-12 21:57:12] Threads: 8
[2025-10-12 21:57:12] Checking for CVMFS
[2025-10-12 21:57:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 21:57:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 21:57:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 21:57:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 21:57:12] 2.13.2.0 1338992 4879 60676 151635 0 57 3181629 4097024 0 130560 0 5041416 99.993 169122 27163 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-12 21:57:12] CVMFS is ok
[2025-10-12 21:57:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 21:57:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 21:57:12] Further information can be found at the LHC@home message board.
[2025-10-12 21:57:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 21:57:12] Checking for apptainer binary...
[2025-10-12 21:57:12] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-12 21:57:12] apptainer is not installed, using version from CVMFS
[2025-10-12 21:57:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 21:57:12] pckeatlas02
[2025-10-12 21:57:12] apptainer works
[2025-10-12 21:57:12] Set ATHENA_PROC_NUMBER=8
[2025-10-12 21:57:12] Set ATHENA_CORE_NUMBER=8
[2025-10-12 21:57:12] Starting ATLAS job with PandaID=6839870941
[2025-10-12 21:57:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:14:31]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:14:31]  mtime=0
[2025-10-12 23:14:31]  protocol_id=None
[2025-10-12 23:14:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 23:14:31]  replicas=None
[2025-10-12 23:14:31]  scope=mc23_13p6TeV
[2025-10-12 23:14:31]  status=None
[2025-10-12 23:14:31]  status_code=0
[2025-10-12 23:14:31]  storage_token=
[2025-10-12 23:14:31]  surl=/var/lib/boinc/slots/19/PanDA_Pilot-6839870941/log.46676269._077178.job.log.tgz.1
[2025-10-12 23:14:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cc/bf/log.46676269._077178.job.log.tgz.1
[2025-10-12 23:14:31]  workdir=None
[2025-10-12 23:14:31] ]
[2025-10-12 23:14:31] 2025-10-12 21:13:19,447 | INFO     | transferring file log.46676269._077178.job.log.tgz.1 from /var/lib/boinc/slots/19/PanDA_Pilot-6839870941/log.46676269._077178.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-12 23:14:31] 2025-10-12 21:13:19,447 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/19/PanDA_Pilot-6839870941/log.46676269._077178.job.log.tgz.1 /var/lib/boinc/slots/19/log.46676269._077178.j
[2025-10-12 23:14:31] 2025-10-12 21:13:19,455 | INFO     | adding to output.list: log.46676269._077178.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cc/bf/log.46676269._077178.job.log.tg
[2025-10-12 23:14:31] 2025-10-12 21:13:19,455 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 23:14:31] 2025-10-12 21:13:19,455 | INFO     | summary of transferred files:
[2025-10-12 23:14:31] 2025-10-12 21:13:19,455 | INFO     |  -- lfn=log.46676269._077178.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 23:14:31] 2025-10-12 21:13:19,455 | INFO     | stage-out finished correctly
[2025-10-12 23:14:31] 2025-10-12 21:13:19,593 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 23:14:31] 2025-10-12 21:13:20,874 | INFO     | job 6839870941 has state=finished
[2025-10-12 23:14:31] 2025-10-12 21:13:20,875 | INFO     | preparing for final server update for job 6839870941 in state='finished'
[2025-10-12 23:14:31] 2025-10-12 21:13:20,875 | INFO     | this job has now completed (state=finished)
[2025-10-12 23:14:31] 2025-10-12 21:13:20,875 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 23:14:31] 2025-10-12 21:13:20,875 | INFO     | log transfer has been attempted: DONE
[2025-10-12 23:14:31] 2025-10-12 21:13:20,875 | INFO     | job 6839870941 has finished - writing final server update
[2025-10-12 23:14:31] 2025-10-12 21:13:20,875 | INFO     | total number of processed events: 400 (read)
[2025-10-12 23:14:31] 2025-10-12 21:13:20,876 | INFO     | executing command: lscpu
[2025-10-12 23:14:31] 2025-10-12 21:13:20,884 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 23:14:31] 2025-10-12 21:13:21,408 | INFO     | time since job start (4565s) is within the limit (172800.0s)
[2025-10-12 23:14:31] 2025-10-12 21:13:23,412 | INFO     | time since job start (4567s) is within the limit (172800.0s)
[2025-10-12 23:14:31] 2025-10-12 21:13:23,490 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 23:14:31] 2025-10-12 21:13:23,491 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3826.34425
[2025-10-12 23:14:31] 2025-10-12 21:13:23,492 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6839870941/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:14:31] 2025-10-12 21:13:23,492 | INFO     | extracted standard info from prmon json
[2025-10-12 23:14:31] 2025-10-12 21:13:23,492 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 23:14:31] 2025-10-12 21:13:23,492 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 23:14:31] 2025-10-12 21:13:23,493 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:14:31] 2025-10-12 21:13:23,493 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:14:31] 2025-10-12 21:13:23,493 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:14:31] 2025-10-12 21:13:23,494 | INFO     | sum of square deviations: 97479037.0
[2025-10-12 23:14:31] 2025-10-12 21:13:23,494 | INFO     | sum of deviations: -6660632730.500001
[2025-10-12 23:14:31] 2025-10-12 21:13:23,494 | INFO     | mean x: 1760301403.5
[2025-10-12 23:14:31] 2025-10-12 21:13:23,494 | INFO     | mean y: 2632821.8088235296
[2025-10-12 23:14:31] 2025-10-12 21:13:23,494 | INFO     | -- intersect: 120282043703.73196
[2025-10-12 23:14:31] 2025-10-12 21:13:23,494 | INFO     | intersect: 120282043703.73196
[2025-10-12 23:14:31] 2025-10-12 21:13:23,494 | INFO     | chi2: 0.11825566798975928
[2025-10-12 23:14:31] 2025-10-12 21:13:23,494 | INFO     | -- intersect: 120282043703.73196
[2025-10-12 23:14:31] 2025-10-12 21:13:23,494 | INFO     | current memory leak: -68.33 B/s (using 68 data points, chi2=0.12)
[2025-10-12 23:14:31] 2025-10-12 21:13:23,494 | INFO     | could have reported an average CPU frequency of 3752 MHz (6 samples)
[2025-10-12 23:14:31] 2025-10-12 21:13:23,494 | INFO     | ..............................
[2025-10-12 23:14:31] 2025-10-12 21:13:23,494 | INFO     | . Timing measurements:
[2025-10-12 23:14:31] 2025-10-12 21:13:23,494 | INFO     | . get job = 0 s
[2025-10-12 23:14:31] 2025-10-12 21:13:23,494 | INFO     | . initial setup = 0 s
[2025-10-12 23:14:31] 2025-10-12 21:13:23,494 | INFO     | . payload setup = 3 s
[2025-10-12 23:14:31] 2025-10-12 21:13:23,494 | INFO     | . stage-in = 0 s
[2025-10-12 23:14:31] 2025-10-12 21:13:23,495 | INFO     | . payload execution = 4543 s
[2025-10-12 23:14:31] 2025-10-12 21:13:23,495 | INFO     | . stage-out = 0 s
[2025-10-12 23:14:31] 2025-10-12 21:13:23,495 | INFO     | . log creation = 0 s
[2025-10-12 23:14:31] 2025-10-12 21:13:23,495 | INFO     | ..............................
[2025-10-12 23:14:31] 2025-10-12 21:13:23,531 | INFO     | 
[2025-10-12 23:14:31] 2025-10-12 21:13:23,531 | INFO     | job summary report
[2025-10-12 23:14:31] 2025-10-12 21:13:23,531 | INFO     | --------------------------------------------------
[2025-10-12 23:14:31] 2025-10-12 21:13:23,531 | INFO     | PanDA job id: 6839870941
[2025-10-12 23:14:31] 2025-10-12 21:13:23,531 | INFO     | task id: 46676269
[2025-10-12 23:14:31] 2025-10-12 21:13:23,531 | INFO     | errors: (none)
[2025-10-12 23:14:31] 2025-10-12 21:13:23,531 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:14:31] 2025-10-12 21:13:23,531 | INFO     | pilot state: finished 
[2025-10-12 23:14:31] 2025-10-12 21:13:23,531 | INFO     | transexitcode: 0
[2025-10-12 23:14:31] 2025-10-12 21:13:23,531 | INFO     | exeerrorcode: 0
[2025-10-12 23:14:31] 2025-10-12 21:13:23,531 | INFO     | exeerrordiag: 
[2025-10-12 23:14:31] 2025-10-12 21:13:23,532 | INFO     | exitcode: 0
[2025-10-12 23:14:31] 2025-10-12 21:13:23,532 | INFO     | exitmsg: OK
[2025-10-12 23:14:31] 2025-10-12 21:13:23,532 | INFO     | cpuconsumptiontime: 34307 s
[2025-10-12 23:14:31] 2025-10-12 21:13:23,532 | INFO     | nevents: 400
[2025-10-12 23:14:31] 2025-10-12 21:13:23,532 | INFO     | neventsw: 0
[2025-10-12 23:14:31] 2025-10-12 21:13:23,532 | INFO     | pid: 3186359
[2025-10-12 23:14:31] 2025-10-12 21:13:23,532 | INFO     | pgrp: 3186359
[2025-10-12 23:14:31] 2025-10-12 21:13:23,532 | INFO     | corecount: 8
[2025-10-12 23:14:31] 2025-10-12 21:13:23,532 | INFO     | event service: False
[2025-10-12 23:14:31] 2025-10-12 21:13:23,532 | INFO     | sizes: {0: 2348687, 1: 2348886, 2: 2349148, 11: 2349176, 4549: 2375407, 4550: 2384590, 4554: 2384728}
[2025-10-12 23:14:31] 2025-10-12 21:13:23,532 | INFO     | --------------------------------------------------
[2025-10-12 23:14:31] 2025-10-12 21:13:23,532 | INFO     | 
[2025-10-12 23:14:31] 2025-10-12 21:13:23,532 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-10-12 23:14:31] 2025-10-12 21:13:23,541 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:14:31] 2025-10-12 21:13:23,542 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:14:31] 2025-10-12 21:13:23,542 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:14:31] 2025-10-12 21:13:23,542 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:14:31] 2025-10-12 21:13:23,542 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:14:31] 2025-10-12 21:13:23,542 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:14:31] 2025-10-12 21:13:23,542 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:14:31] 2025-10-12 21:13:23,542 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:14:31] 2025-10-12 21:13:23,542 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:14:31] 2025-10-12 21:13:23,542 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:14:31] 2025-10-12 21:13:23,542 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:14:31] 2025-10-12 21:13:23,542 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:14:31] 2025-10-12 21:13:23,542 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:14:31] 2025-10-12 21:13:23,542 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:14:31] 2025-10-12 21:13:23,542 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:14:31] 2025-10-12 21:13:23,542 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:14:31] 2025-10-12 21:13:23,542 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:14:31] 2025-10-12 21:13:23,542 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:14:31] 2025-10-12 21:13:23,542 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:14:31] 2025-10-12 21:13:23,542 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:14:31] 2025-10-12 21:13:23,542 | INFO     | job 6839870941 has completed (purged errors)
[2025-10-12 23:14:31] 2025-10-12 21:13:23,542 | INFO     | overall cleanup function is called
[2025-10-12 23:14:31] 2025-10-12 21:13:24,548 | INFO     | --- collectZombieJob: --- 10, [3186359]
[2025-10-12 23:14:31] 2025-10-12 21:13:24,548 | INFO     | zombie collector waiting for pid 3186359
[2025-10-12 23:14:31] 2025-10-12 21:13:24,549 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:14:31] 2025-10-12 21:13:24,549 | INFO     | collected zombie processes
[2025-10-12 23:14:31] 2025-10-12 21:13:24,549 | INFO     | will attempt to kill all subprocesses of pid=3186359
[2025-10-12 23:14:31] 2025-10-12 21:13:24,580 | INFO     | process IDs to be killed: [3186359] (in reverse order)
[2025-10-12 23:14:31] 2025-10-12 21:13:24,595 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:14:31] 2025-10-12 21:13:24,596 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:14:31] 2025-10-12 21:13:24,597 | INFO     | did not find any defunct processes belonging to 3186359
[2025-10-12 23:14:31] 2025-10-12 21:13:24,597 | INFO     | did not find any defunct processes belonging to 3186359
[2025-10-12 23:14:31] 2025-10-12 21:13:24,597 | INFO     | ready for new job
[2025-10-12 23:14:31] 2025-10-12 21:13:24,597 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:14:31] 2025-10-12 21:13:24,598 | INFO     | ***************************************
[2025-10-12 23:14:31] 2025-10-12 21:13:24,598 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:14:31] 2025-10-12 21:13:24,598 | INFO     | ***************************************
[2025-10-12 23:14:31] 2025-10-12 21:13:24,598 | INFO     | 
[2025-10-12 23:14:31] 2025-10-12 21:13:24,599 | INFO     | architecture information:
[2025-10-12 23:14:31] 2025-10-12 21:13:24,599 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:14:31] 2025-10-12 21:13:24,604 | INFO     | cat /etc/os-release:
[2025-10-12 23:14:31] NAME="CentOS Linux"
[2025-10-12 23:14:31] VERSION="7 (Core)"
[2025-10-12 23:14:31] ID="centos"
[2025-10-12 23:14:31] ID_LIKE="rhel fedora"
[2025-10-12 23:14:31] VERSION_ID="7"
[2025-10-12 23:14:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:14:31] ANSI_COLOR="0;31"
[2025-10-12 23:14:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:14:31] HOME_URL="https://www.centos.org/"
[2025-10-12 23:14:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:14:31] 
[2025-10-12 23:14:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:14:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:14:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:14:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:14:31] 
[2025-10-12 23:14:31] 2025-10-12 21:13:24,604 | INFO     | ***************************************
[2025-10-12 23:14:31] 2025-10-12 21:13:25,106 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-10-12 23:14:31] 2025-10-12 21:13:25,114 | INFO     | sufficient remaining disk space (118203875328 B)
[2025-10-12 23:14:31] 2025-10-12 21:13:25,114 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:14:31] 2025-10-12 21:13:25,115 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:14:31] 2025-10-12 21:13:25,115 | INFO     | update_server=False
[2025-10-12 23:14:31] 2025-10-12 21:13:25,115 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:14:31] 2025-10-12 21:13:25,115 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-12 23:14:31] 2025-10-12 21:13:25,115 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:14:31] 2025-10-12 21:13:25,115 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:14:31] 2025-10-12 21:13:25,115 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:14:31] 2025-10-12 21:13:25,116 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:14:31] 2025-10-12 21:13:25,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:14:31] 2025-10-12 21:13:25,144 | WARNING  | process 3186359 can no longer be monitored (due to stat problems) - aborting
[2025-10-12 23:14:31] 2025-10-12 21:13:25,168 | INFO     | using path: /var/lib/boinc/slots/19/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 23:14:31] 2025-10-12 21:13:25,198 | INFO     | number of running child processes to parent process 3186359: 1
[2025-10-12 23:14:31] 2025-10-12 21:13:25,198 | INFO     | maximum number of monitored processes: 6
[2025-10-12 23:14:31] 2025-10-12 21:13:25,198 | INFO     | aborting job monitoring since job object (job id=6839870941) has expired
[2025-10-12 23:14:31] 2025-10-12 21:13:25,199 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:14:31] 2025-10-12 21:13:25,199 | INFO     | will abort loop
[2025-10-12 23:14:31] 2025-10-12 21:13:25,285 | INFO     | all data control threads have been joined
[2025-10-12 23:14:31] 2025-10-12 21:13:25,510 | INFO     | job.realtimelogging is not enabled
[2025-10-12 23:14:31] 2025-10-12 21:13:25,632 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:14:31] 2025-10-12 21:13:25,976 | INFO     | all job control threads have been joined
[2025-10-12 23:14:31] 2025-10-12 21:13:26,120 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:14:31] 2025-10-12 21:13:26,120 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:14:31] 2025-10-12 21:13:26,204 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:14:31] 2025-10-12 21:13:26,290 | INFO     | [data] control thread has finished
[2025-10-12 23:14:31] 2025-10-12 21:13:26,307 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:14:31] 2025-10-12 21:13:26,467 | INFO     | all payload control threads have been joined
[2025-10-12 23:14:31] 2025-10-12 21:13:26,516 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:14:31] 2025-10-12 21:13:26,517 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:14:31] 2025-10-12 21:13:26,982 | INFO     | [job] control thread has finished
[2025-10-12 23:14:31] 2025-10-12 21:13:27,121 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:14:31] 2025-10-12 21:13:27,273 | INFO     | [job] validate thread has finished
[2025-10-12 23:14:31] 2025-10-12 21:13:27,325 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:14:31] 2025-10-12 21:13:27,325 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:14:31] 2025-10-12 21:13:27,455 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:14:31] 2025-10-12 21:13:27,472 | INFO     | [payload] control thread has finished
[2025-10-12 23:14:31] 2025-10-12 21:13:27,686 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:14:31] 2025-10-12 21:13:29,636 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:14:31] 2025-10-12 21:14:23,850 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:14:31] 2025-10-12 21:14:25,941 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139705649186624)>', '<ExcThread(monitor, started 139704733259520)>']
[2025-10-12 23:14:31] 2025-10-12 21:14:26,426 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:14:31] 2025-10-12 21:14:26,426 | INFO     | [monitor] control thread has ended
[2025-10-12 23:14:31] 2025-10-12 21:14:30,967 | INFO     | all workflow threads have been joined
[2025-10-12 23:14:31] 2025-10-12 21:14:30,967 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:14:31] 2025-10-12 21:14:30,967 | INFO     | traces error code: 0
[2025-10-12 23:14:31] 2025-10-12 21:14:30,967 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:14:31] 2025-10-12 21:14:31,077 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:14:31] 2025-10-12 21:14:31,079 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:14:31] 2025-10-12 21:14:31,080 [wrapper] pilotpid: 3179066
[2025-10-12 23:14:31] 2025-10-12 21:14:31,081 [wrapper] Pilot exit status: 0
[2025-10-12 23:14:31] 2025-10-12 21:14:31,085 [wrapper] pandaids: 6839870941
[2025-10-12 23:14:31] 2025-10-12 21:14:31,100 [wrapper] cleanup supervisor_pilot 3202247 3179067
[2025-10-12 23:14:31] 2025-10-12 21:14:31,101 [wrapper] Test setup, not cleaning
[2025-10-12 23:14:31] 2025-10-12 21:14:31,102 [wrapper] apfmon messages muted
[2025-10-12 23:14:31] 2025-10-12 21:14:31,103 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:14:31] 2025-10-12 21:14:31,104 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:14:31]  *** Error codes and diagnostics ***
[2025-10-12 23:14:31]     "exeErrorCode": 0,
[2025-10-12 23:14:31]     "exeErrorDiag": "",
[2025-10-12 23:14:31]     "pilotErrorCode": 0,
[2025-10-12 23:14:31]     "pilotErrorDiag": "",
[2025-10-12 23:14:31]  *** Listing of results directory ***
[2025-10-12 23:14:31] total 408884
[2025-10-12 23:14:31] -rw-r--r--. 1 boinc boinc    557409 Oct 12 13:23 pilot3.tar.gz
[2025-10-12 23:14:31] -rw-r--r--. 1 boinc boinc      5112 Oct 12 13:31 queuedata.json
[2025-10-12 23:14:31] -rwx------. 1 boinc boinc     36292 Oct 12 13:32 runpilot2-wrapper.sh
[2025-10-12 23:14:31] -rw-r--r--. 1 boinc boinc       100 Oct 12 21:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:14:31] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 21:57 run_atlas
[2025-10-12 23:14:31] -rw-r--r--. 1 boinc boinc       105 Oct 12 21:57 job.xml
[2025-10-12 23:14:31] -rw-r--r--. 1 boinc boinc      6275 Oct 12 21:57 init_data.xml
[2025-10-12 23:14:31] -rw-r--r--. 2 boinc boinc 219522031 Oct 12 21:57 EVNT.46676267._003699.pool.root.1
[2025-10-12 23:14:31] -rw-r--r--. 2 boinc boinc     15120 Oct 12 21:57 start_atlas.sh
[2025-10-12 23:14:31] drwxrwx--x. 2 boinc boinc        68 Oct 12 21:57 shared
[2025-10-12 23:14:31] -rw-r--r--. 2 boinc boinc    569688 Oct 12 21:57 input.tar.gz
[2025-10-12 23:14:31] -rw-r--r--. 1 boinc boinc         0 Oct 12 21:57 boinc_lockfile
[2025-10-12 23:14:31] -rw-r--r--. 1 boinc boinc      2550 Oct 12 21:57 pandaJob.out
[2025-10-12 23:14:31] -rw-------. 1 boinc boinc    975536 Oct 12 21:57 agis_schedconf.cvmfs.json
[2025-10-12 23:14:31] -rw-------. 1 boinc boinc   1560580 Oct 12 21:57 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:14:31] drwx------. 5 boinc boinc      4096 Oct 12 21:57 pilot3
[2025-10-12 23:14:31] -rw-------. 1 boinc boinc        95 Oct 12 23:12 pilot_heartbeat.json
[2025-10-12 23:14:31] -rw-------. 1 boinc boinc 193293462 Oct 12 23:12 HITS.46676269._077178.pool.root.1
[2025-10-12 23:14:31] -rw-r--r--. 1 boinc boinc       529 Oct 12 23:13 boinc_task_state.xml
[2025-10-12 23:14:31] -rw-------. 1 boinc boinc      1014 Oct 12 23:13 memory_monitor_summary.json
[2025-10-12 23:14:31] -rw-------. 1 boinc boinc    323442 Oct 12 23:13 log.46676269._077178.job.log.tgz.1
[2025-10-12 23:14:31] -rw-------. 1 boinc boinc      7771 Oct 12 23:13 heartbeat.json
[2025-10-12 23:14:31] -rw-r--r--. 1 boinc boinc      8192 Oct 12 23:14 boinc_mmap_file
[2025-10-12 23:14:31] -rw-r--r--. 1 boinc boinc        27 Oct 12 23:14 wrapper_checkpoint.txt
[2025-10-12 23:14:31] -rw-------. 1 boinc boinc      5148 Oct 12 23:14 pilotlog.txt
[2025-10-12 23:14:31] -rw-------. 1 boinc boinc    672638 Oct 12 23:14 log.46676269._077178.job.log.1
[2025-10-12 23:14:31] -rw-------. 1 boinc boinc       357 Oct 12 23:14 output.list
[2025-10-12 23:14:31] -rw-r--r--. 1 boinc boinc       620 Oct 12 23:14 runtime_log
[2025-10-12 23:14:31] -rw-------. 1 boinc boinc   1013760 Oct 12 23:14 result.tar.gz
[2025-10-12 23:14:31] -rw-------. 1 boinc boinc       649 Oct 12 23:14 ZMXMDmtU9R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrdjNDmLGy61m.diag
[2025-10-12 23:14:31] -rw-r--r--. 1 boinc boinc      8730 Oct 12 23:14 runtime_log.err
[2025-10-12 23:14:31] -rw-r--r--. 1 boinc boinc     21693 Oct 12 23:14 stderr.txt
[2025-10-12 23:14:31] HITS file was successfully produced:
[2025-10-12 23:14:31] -rw-------. 1 boinc boinc 193293462 Oct 12 23:12 shared/HITS.pool.root.1
[2025-10-12 23:14:31]  *** Contents of shared directory: ***
[2025-10-12 23:14:31] total 404712
[2025-10-12 23:14:31] -rw-r--r--. 2 boinc boinc 219522031 Oct 12 21:57 ATLAS.root_0
[2025-10-12 23:14:31] -rw-r--r--. 2 boinc boinc     15120 Oct 12 21:57 start_atlas.sh
[2025-10-12 23:14:31] -rw-r--r--. 2 boinc boinc    569688 Oct 12 21:57 input.tar.gz
[2025-10-12 23:14:31] -rw-------. 1 boinc boinc 193293462 Oct 12 23:12 HITS.pool.root.1
[2025-10-12 23:14:31] -rw-------. 1 boinc boinc   1013760 Oct 12 23:14 result.tar.gz
23:14:33 (3175317): run_atlas exited; CPU time 34344.633745
23:14:33 (3175317): called boinc_finish(0)

</stderr_txt>
]]>

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