Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:02:07 (21672): wrapper (7.7.26015): starting
15:02:07 (21672): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 15:02:07] Arguments: --nthreads 8
[2025-10-12 15:02:07] Threads: 8
[2025-10-12 15:02:07] Checking for CVMFS
[2025-10-12 15:02:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 15:02:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 15:02:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 15:02:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 15:02:13] 2.11.2.0 23903 18581 84364 151620 3 11 14039152 25165825 4632 130560 0 5408987 99.971 1734512 1402 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-12 15:02:13] CVMFS is ok
[2025-10-12 15:02:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 15:02:13] Checking for apptainer binary...
[2025-10-12 15:02:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 15:02:13] Running /usr/bin/apptainer --version
[2025-10-12 15:02:13] apptainer version 1.3.2-1.el7
[2025-10-12 15:02:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 15:02:29] cg-vwn444.simple-grid.lan
[2025-10-12 15:02:29] apptainer works
[2025-10-12 15:02:29] Set ATHENA_PROC_NUMBER=8
[2025-10-12 15:02:29] Set ATHENA_CORE_NUMBER=8
[2025-10-12 15:02:29] Starting ATLAS job with PandaID=6839774583
[2025-10-12 15:02:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:25:28]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:25:28] 2025-10-12 17:24:26,118 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:25:28] 2025-10-12 17:24:26,129 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:25:28] 2025-10-12 17:24:26,130 | INFO     | sum of square deviations: 4560048290.0
[2025-10-12 19:25:28] 2025-10-12 17:24:26,132 | INFO     | sum of deviations: 38963915859.00001
[2025-10-12 19:25:28] 2025-10-12 17:24:26,132 | INFO     | mean x: 1760282264.0
[2025-10-12 19:25:28] 2025-10-12 17:24:26,132 | INFO     | mean y: 2477998.779591837
[2025-10-12 19:25:28] 2025-10-12 17:24:26,133 | INFO     | -- intersect: -15038478951.828938
[2025-10-12 19:25:28] 2025-10-12 17:24:26,133 | INFO     | intersect: -15038478951.828938
[2025-10-12 19:25:28] 2025-10-12 17:24:26,133 | INFO     | chi2: 6.304389930285112
[2025-10-12 19:25:28] 2025-10-12 17:24:26,137 | INFO     | sum of square deviations: 4286517580.0
[2025-10-12 19:25:28] 2025-10-12 17:24:26,139 | INFO     | sum of deviations: 54676505912.500015
[2025-10-12 19:25:28] 2025-10-12 17:24:26,139 | INFO     | mean x: 1760282111.5
[2025-10-12 19:25:28] 2025-10-12 17:24:26,140 | INFO     | mean y: 2486609.4291666667
[2025-10-12 19:25:28] 2025-10-12 17:24:26,140 | INFO     | -- intersect: -22450722430.506176
[2025-10-12 19:25:28] 2025-10-12 17:24:26,140 | INFO     | intersect: -22450722430.506176
[2025-10-12 19:25:28] 2025-10-12 17:24:26,140 | INFO     | chi2: 5.58706025999356
[2025-10-12 19:25:28] 2025-10-12 17:24:26,140 | INFO     | current chi2=5.58706025999356 (change=11.378256710385786 %)
[2025-10-12 19:25:28] 2025-10-12 17:24:26,141 | INFO     | right removable region: 239
[2025-10-12 19:25:28] 2025-10-12 17:24:26,141 | INFO     | sum of square deviations: 4286517580.0
[2025-10-12 19:25:28] 2025-10-12 17:24:26,146 | INFO     | sum of deviations: -43487265176.5
[2025-10-12 19:25:28] 2025-10-12 17:24:26,146 | INFO     | mean x: 1760282416.5
[2025-10-12 19:25:28] 2025-10-12 17:24:26,147 | INFO     | mean y: 2523920.029166667
[2025-10-12 19:25:28] 2025-10-12 17:24:26,147 | INFO     | -- intersect: 17860812566.51262
[2025-10-12 19:25:28] 2025-10-12 17:24:26,147 | INFO     | intersect: 17860812566.51262
[2025-10-12 19:25:28] 2025-10-12 17:24:26,147 | INFO     | chi2: 1.896109159676321
[2025-10-12 19:25:28] 2025-10-12 17:24:26,147 | INFO     | current chi2=1.896109159676321 (change=69.92398660863651 %)
[2025-10-12 19:25:28] 2025-10-12 17:24:26,148 | INFO     | sum of square deviations: 4024149870.0
[2025-10-12 19:25:28] 2025-10-12 17:24:26,150 | INFO     | sum of deviations: -73988172399.0
[2025-10-12 19:25:28] 2025-10-12 17:24:26,150 | INFO     | mean x: 1760282569.0
[2025-10-12 19:25:28] 2025-10-12 17:24:26,150 | INFO     | mean y: 2541514.714893617
[2025-10-12 19:25:28] 2025-10-12 17:24:26,150 | INFO     | -- intersect: 32367163706.613182
[2025-10-12 19:25:28] 2025-10-12 17:24:26,150 | INFO     | intersect: 32367163706.613182
[2025-10-12 19:25:28] 2025-10-12 17:24:26,151 | INFO     | chi2: 1.0190879028802005
[2025-10-12 19:25:28] 2025-10-12 17:24:26,151 | INFO     | current chi2=1.0190879028802005 (change=46.25373240356237 %)
[2025-10-12 19:25:28] 2025-10-12 17:24:26,151 | INFO     | sum of square deviations: 3772712597.5
[2025-10-12 19:25:28] 2025-10-12 17:24:26,156 | INFO     | sum of deviations: -72744278546.5
[2025-10-12 19:25:28] 2025-10-12 17:24:26,157 | INFO     | mean x: 1760282721.5
[2025-10-12 19:25:28] 2025-10-12 17:24:26,157 | INFO     | mean y: 2540727.5260869567
[2025-10-12 19:25:28] 2025-10-12 17:24:26,157 | INFO     | -- intersect: 33943768240.65289
[2025-10-12 19:25:28] 2025-10-12 17:24:26,157 | INFO     | intersect: 33943768240.65289
[2025-10-12 19:25:28] 2025-10-12 17:24:26,158 | INFO     | chi2: 1.002222295317136
[2025-10-12 19:25:28] 2025-10-12 17:24:26,158 | INFO     | current chi2=1.002222295317136 (change=1.6549708337620292 %)
[2025-10-12 19:25:28] 2025-10-12 17:24:26,158 | INFO     | left removable region: 30
[2025-10-12 19:25:28] 2025-10-12 17:24:26,158 | INFO     | sum of square deviations: 2830787960.0
[2025-10-12 19:25:28] 2025-10-12 17:24:26,160 | INFO     | sum of deviations: -33958590443.999996
[2025-10-12 19:25:28] 2025-10-12 17:24:26,160 | INFO     | mean x: 1760282996.0
[2025-10-12 19:25:28] 2025-10-12 17:24:26,160 | INFO     | mean y: 2536391.224880383
[2025-10-12 19:25:28] 2025-10-12 17:24:26,161 | INFO     | -- intersect: 21119176058.825165
[2025-10-12 19:25:28] 2025-10-12 17:24:26,161 | INFO     | intersect: 21119176058.825165
[2025-10-12 19:25:28] 2025-10-12 17:24:26,161 | INFO     | chi2: 0.1789475894406921
[2025-10-12 19:25:28] 2025-10-12 17:24:26,161 | INFO     | -- intersect: 21119176058.825165
[2025-10-12 19:25:28] 2025-10-12 17:24:26,162 | INFO     | current memory leak: -12.00 B/s (using 209 data points, chi2=0.18)
[2025-10-12 19:25:28] 2025-10-12 17:24:26,162 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-12 19:25:28] 2025-10-12 17:24:26,163 | INFO     | ..............................
[2025-10-12 19:25:28] 2025-10-12 17:24:26,163 | INFO     | . Timing measurements:
[2025-10-12 19:25:28] 2025-10-12 17:24:26,163 | INFO     | . get job = 0 s
[2025-10-12 19:25:28] 2025-10-12 17:24:26,163 | INFO     | . initial setup = 8 s
[2025-10-12 19:25:28] 2025-10-12 17:24:26,163 | INFO     | . payload setup = 130 s
[2025-10-12 19:25:28] 2025-10-12 17:24:26,163 | INFO     | . stage-in = 0 s
[2025-10-12 19:25:28] 2025-10-12 17:24:26,163 | INFO     | . payload execution = 15078 s
[2025-10-12 19:25:28] 2025-10-12 17:24:26,163 | INFO     | . stage-out = 5 s
[2025-10-12 19:25:28] 2025-10-12 17:24:26,163 | INFO     | . log creation = 1 s
[2025-10-12 19:25:28] 2025-10-12 17:24:26,163 | INFO     | ..............................
[2025-10-12 19:25:28] 2025-10-12 17:24:26,220 | INFO     | time since job start (15515s) is within the limit (172800.0s)
[2025-10-12 19:25:28] 2025-10-12 17:24:26,292 | INFO     | 
[2025-10-12 19:25:28] 2025-10-12 17:24:26,292 | INFO     | job summary report
[2025-10-12 19:25:28] 2025-10-12 17:24:26,292 | INFO     | --------------------------------------------------
[2025-10-12 19:25:28] 2025-10-12 17:24:26,292 | INFO     | PanDA job id: 6839774583
[2025-10-12 19:25:28] 2025-10-12 17:24:26,292 | INFO     | task id: 46676269
[2025-10-12 19:25:28] 2025-10-12 17:24:26,292 | INFO     | errors: (none)
[2025-10-12 19:25:28] 2025-10-12 17:24:26,292 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:25:28] 2025-10-12 17:24:26,293 | INFO     | pilot state: finished 
[2025-10-12 19:25:28] 2025-10-12 17:24:26,293 | INFO     | transexitcode: 0
[2025-10-12 19:25:28] 2025-10-12 17:24:26,293 | INFO     | exeerrorcode: 0
[2025-10-12 19:25:28] 2025-10-12 17:24:26,293 | INFO     | exeerrordiag: 
[2025-10-12 19:25:28] 2025-10-12 17:24:26,293 | INFO     | exitcode: 0
[2025-10-12 19:25:28] 2025-10-12 17:24:26,293 | INFO     | exitmsg: OK
[2025-10-12 19:25:28] 2025-10-12 17:24:26,293 | INFO     | cpuconsumptiontime: 57135 s
[2025-10-12 19:25:28] 2025-10-12 17:24:26,293 | INFO     | nevents: 400
[2025-10-12 19:25:28] 2025-10-12 17:24:26,293 | INFO     | neventsw: 0
[2025-10-12 19:25:28] 2025-10-12 17:24:26,293 | INFO     | pid: 32380
[2025-10-12 19:25:28] 2025-10-12 17:24:26,293 | INFO     | pgrp: 32380
[2025-10-12 19:25:28] 2025-10-12 17:24:26,293 | INFO     | corecount: 8
[2025-10-12 19:25:28] 2025-10-12 17:24:26,293 | INFO     | event service: False
[2025-10-12 19:25:28] 2025-10-12 17:24:26,294 | INFO     | sizes: {0: 2348628, 1: 2348883, 12: 2348883, 23: 2348911, 33: 2348939, 45: 2348995, 55: 2349151, 66: 2349179, 77: 2349207, 87: 2349263, 93: 2349553, 98: 2349861, 1
[2025-10-12 19:25:28] 2025-10-12 17:24:26,294 | INFO     | --------------------------------------------------
[2025-10-12 19:25:28] 2025-10-12 17:24:26,294 | INFO     | 
[2025-10-12 19:25:28] 2025-10-12 17:24:26,294 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-10-12 19:25:28] 2025-10-12 17:24:26,632 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:25:28] 2025-10-12 17:24:26,633 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:25:28] 2025-10-12 17:24:26,633 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:25:28] 2025-10-12 17:24:26,633 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:25:28] 2025-10-12 17:24:26,633 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:25:28] 2025-10-12 17:24:26,633 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:25:28] 2025-10-12 17:24:26,633 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:25:28] 2025-10-12 17:24:26,633 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:25:28] 2025-10-12 17:24:26,633 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:25:28] 2025-10-12 17:24:26,633 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:25:28] 2025-10-12 17:24:26,633 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:25:28] 2025-10-12 17:24:26,633 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:25:28] 2025-10-12 17:24:26,634 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:25:28] 2025-10-12 17:24:26,634 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:25:28] 2025-10-12 17:24:26,634 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:25:28] 2025-10-12 17:24:26,634 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:25:28] 2025-10-12 17:24:26,634 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:25:28] 2025-10-12 17:24:26,634 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:25:28] 2025-10-12 17:24:26,634 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:25:28] 2025-10-12 17:24:26,634 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:25:28] 2025-10-12 17:24:26,634 | INFO     | job 6839774583 has completed (purged errors)
[2025-10-12 19:25:28] 2025-10-12 17:24:26,634 | INFO     | overall cleanup function is called
[2025-10-12 19:25:28] 2025-10-12 17:24:27,644 | INFO     | --- collectZombieJob: --- 10, [32380]
[2025-10-12 19:25:28] 2025-10-12 17:24:27,644 | INFO     | zombie collector waiting for pid 32380
[2025-10-12 19:25:28] 2025-10-12 17:24:27,644 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:25:28] 2025-10-12 17:24:27,644 | INFO     | collected zombie processes
[2025-10-12 19:25:28] 2025-10-12 17:24:27,644 | INFO     | will attempt to kill all subprocesses of pid=32380
[2025-10-12 19:25:28] 2025-10-12 17:24:27,748 | INFO     | process IDs to be killed: [32380] (in reverse order)
[2025-10-12 19:25:28] 2025-10-12 17:24:28,709 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:25:28] 2025-10-12 17:24:28,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:25:28] 2025-10-12 17:24:28,713 | INFO     | did not find any defunct processes belonging to 32380
[2025-10-12 19:25:28] 2025-10-12 17:24:28,716 | INFO     | did not find any defunct processes belonging to 32380
[2025-10-12 19:25:28] 2025-10-12 17:24:28,716 | INFO     | ready for new job
[2025-10-12 19:25:28] 2025-10-12 17:24:28,717 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:25:28] 2025-10-12 17:24:28,719 | INFO     | ***************************************
[2025-10-12 19:25:28] 2025-10-12 17:24:28,719 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:25:28] 2025-10-12 17:24:28,719 | INFO     | ***************************************
[2025-10-12 19:25:28] 2025-10-12 17:24:28,719 | INFO     | 
[2025-10-12 19:25:28] 2025-10-12 17:24:28,720 | INFO     | pilot is running in a VM
[2025-10-12 19:25:28] 2025-10-12 17:24:28,720 | INFO     | architecture information:
[2025-10-12 19:25:28] 2025-10-12 17:24:28,732 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:25:28] 2025-10-12 17:24:29,052 | INFO     | cat /etc/os-release:
[2025-10-12 19:25:28] NAME="CentOS Linux"
[2025-10-12 19:25:28] VERSION="7 (Core)"
[2025-10-12 19:25:28] ID="centos"
[2025-10-12 19:25:28] ID_LIKE="rhel fedora"
[2025-10-12 19:25:28] VERSION_ID="7"
[2025-10-12 19:25:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:25:28] ANSI_COLOR="0;31"
[2025-10-12 19:25:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:25:28] HOME_URL="https://www.centos.org/"
[2025-10-12 19:25:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:25:28] 
[2025-10-12 19:25:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:25:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:25:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:25:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:25:28] 
[2025-10-12 19:25:28] 2025-10-12 17:24:29,052 | INFO     | ***************************************
[2025-10-12 19:25:28] 2025-10-12 17:24:29,556 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-10-12 19:25:28] 2025-10-12 17:24:29,825 | INFO     | sufficient remaining disk space (495802384384 B)
[2025-10-12 19:25:28] 2025-10-12 17:24:29,826 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:25:28] 2025-10-12 17:24:29,826 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:25:28] 2025-10-12 17:24:29,826 | INFO     | update_server=False
[2025-10-12 19:25:28] 2025-10-12 17:24:29,826 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:25:28] 2025-10-12 17:24:29,827 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:25:28] 2025-10-12 17:24:29,827 | INFO     | aborting loop
[2025-10-12 19:25:28] 2025-10-12 17:24:29,830 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:25:28] 2025-10-12 17:24:29,905 | INFO     | all job control threads have been joined
[2025-10-12 19:25:28] 2025-10-12 17:24:30,832 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:25:28] 2025-10-12 17:24:30,833 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:25:28] 2025-10-12 17:24:30,843 | INFO     | all data control threads have been joined
[2025-10-12 19:25:28] 2025-10-12 17:24:30,911 | INFO     | [job] control thread has finished
[2025-10-12 19:25:28] 2025-10-12 17:24:30,958 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:25:28] 2025-10-12 17:24:30,982 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:25:28] 2025-10-12 17:24:30,989 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:25:28] 2025-10-12 17:24:31,253 | INFO     | all payload control threads have been joined
[2025-10-12 19:25:28] 2025-10-12 17:24:31,305 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:25:28] 2025-10-12 17:24:31,389 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:25:28] 2025-10-12 17:24:31,849 | INFO     | [data] control thread has finished
[2025-10-12 19:25:28] 2025-10-12 17:24:32,019 | INFO     | [job] validate thread has finished
[2025-10-12 19:25:28] 2025-10-12 17:24:32,186 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:25:28] 2025-10-12 17:24:32,190 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:25:28] 2025-10-12 17:24:32,259 | INFO     | [payload] control thread has finished
[2025-10-12 19:25:28] 2025-10-12 17:24:32,289 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:25:28] 2025-10-12 17:24:32,311 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:25:28] 2025-10-12 17:24:32,323 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:25:28] 2025-10-12 17:24:32,996 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:25:28] 2025-10-12 17:24:33,839 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:25:28] 2025-10-12 17:24:59,392 | INFO     | PID=25805 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 19:25:28] 2025-10-12 17:24:59,392 | INFO     | .. there are 9 such processes running
[2025-10-12 19:25:28] 2025-10-12 17:24:59,393 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:25:28] 2025-10-12 17:24:59,393 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:25:28] 2025-10-12 17:24:59,393 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:25:28] 2025-10-12 17:25:17,623 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:25:28] 2025-10-12 17:25:18,854 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140613012203328)>', '<ExcThread(monitor, started 140612196103936)>']
[2025-10-12 19:25:28] 2025-10-12 17:25:19,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:25:28] 2025-10-12 17:25:19,513 | INFO     | [monitor] control thread has ended
[2025-10-12 19:25:28] 2025-10-12 17:25:23,880 | INFO     | all workflow threads have been joined
[2025-10-12 19:25:28] 2025-10-12 17:25:23,880 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:25:28] 2025-10-12 17:25:23,880 | INFO     | traces error code: 0
[2025-10-12 19:25:28] 2025-10-12 17:25:23,880 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:25:28] 2025-10-12 17:25:24,275 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:25:28] 2025-10-12 17:25:24,310 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:25:28] 2025-10-12 17:25:24,371 [wrapper] pilotpid: 25805
[2025-10-12 19:25:28] 2025-10-12 17:25:24,401 [wrapper] Pilot exit status: 0
[2025-10-12 19:25:28] 2025-10-12 17:25:24,715 [wrapper] pandaids: 6839774583
[2025-10-12 19:25:28] 2025-10-12 17:25:25,529 [wrapper] cleanup supervisor_pilot 26965 25806
[2025-10-12 19:25:28] 2025-10-12 17:25:25,656 [wrapper] Test setup, not cleaning
[2025-10-12 19:25:28] 2025-10-12 17:25:25,702 [wrapper] apfmon messages muted
[2025-10-12 19:25:28] 2025-10-12 17:25:25,799 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:25:28] 2025-10-12 17:25:25,845 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:25:28]  *** Error codes and diagnostics ***
[2025-10-12 19:25:28]     "exeErrorCode": 0,
[2025-10-12 19:25:28]     "exeErrorDiag": "",
[2025-10-12 19:25:28]     "pilotErrorCode": 0,
[2025-10-12 19:25:28]     "pilotErrorDiag": "",
[2025-10-12 19:25:28]  *** Listing of results directory ***
[2025-10-12 19:25:28] total 419432
[2025-10-12 19:25:28] -rw-r--r--. 1 boinc boinc    557409 Oct 12 10:37 pilot3.tar.gz
[2025-10-12 19:25:28] -rw-r--r--. 1 boinc boinc      5112 Oct 12 10:41 queuedata.json
[2025-10-12 19:25:28] -rwx------. 1 boinc boinc     36292 Oct 12 10:41 runpilot2-wrapper.sh
[2025-10-12 19:25:28] -rw-r--r--. 1 boinc boinc       100 Oct 12 15:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:25:28] -rwxr-xr-x. 1 boinc boinc      7986 Oct 12 15:02 run_atlas
[2025-10-12 19:25:28] -rw-r--r--. 1 boinc boinc       105 Oct 12 15:02 job.xml
[2025-10-12 19:25:28] -rw-r--r--. 1 boinc boinc      6390 Oct 12 15:02 init_data.xml
[2025-10-12 19:25:28] -rw-r--r--. 2 boinc boinc 219851249 Oct 12 15:02 EVNT.46676267._003541.pool.root.1
[2025-10-12 19:25:28] -rw-r--r--. 2 boinc boinc     15120 Oct 12 15:02 start_atlas.sh
[2025-10-12 19:25:28] drwxrwx--x. 2 boinc boinc        68 Oct 12 15:02 shared
[2025-10-12 19:25:28] -rw-r--r--. 2 boinc boinc    569679 Oct 12 15:02 input.tar.gz
[2025-10-12 19:25:28] -rw-r--r--. 1 boinc boinc         0 Oct 12 15:02 boinc_lockfile
[2025-10-12 19:25:28] -rw-r--r--. 1 boinc boinc      2549 Oct 12 15:02 pandaJob.out
[2025-10-12 19:25:28] -rw-------. 1 boinc boinc    975512 Oct 12 15:05 agis_schedconf.cvmfs.json
[2025-10-12 19:25:28] drwx------. 5 boinc boinc      4096 Oct 12 15:05 pilot3
[2025-10-12 19:25:28] -rw-------. 1 boinc boinc 200694158 Oct 12 19:21 HITS.46676269._074475.pool.root.1
[2025-10-12 19:25:28] -rw-r--r--. 1 boinc boinc       531 Oct 12 19:21 boinc_task_state.xml
[2025-10-12 19:25:28] -rw-------. 1 boinc boinc      1017 Oct 12 19:22 memory_monitor_summary.json
[2025-10-12 19:25:28] -rw-------. 1 boinc boinc   1560580 Oct 12 19:22 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:25:28] -rw-------. 1 boinc boinc    456445 Oct 12 19:22 log.46676269._074475.job.log.tgz.1
[2025-10-12 19:25:28] -rw-------. 1 boinc boinc      7785 Oct 12 19:24 heartbeat.json
[2025-10-12 19:25:28] -rw-r--r--. 1 boinc boinc        28 Oct 12 19:24 wrapper_checkpoint.txt
[2025-10-12 19:25:28] -rw-------. 1 boinc boinc        95 Oct 12 19:24 pilot_heartbeat.json
[2025-10-12 19:25:28] -rw-------. 1 boinc boinc      4884 Oct 12 19:25 pilotlog.txt
[2025-10-12 19:25:28] -rw-------. 1 boinc boinc   2074185 Oct 12 19:25 log.46676269._074475.job.log.1
[2025-10-12 19:25:28] -rw-------. 1 boinc boinc       357 Oct 12 19:25 output.list
[2025-10-12 19:25:28] -rw-r--r--. 1 boinc boinc       620 Oct 12 19:25 runtime_log
[2025-10-12 19:25:28] -rw-------. 1 boinc boinc   2549760 Oct 12 19:25 result.tar.gz
[2025-10-12 19:25:28] -rw-r--r--. 1 boinc boinc      8703 Oct 12 19:25 runtime_log.err
[2025-10-12 19:25:28] -rw-------. 1 boinc boinc       657 Oct 12 19:25 OWeNDmIp6R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcCjNDmfoB2en.diag
[2025-10-12 19:25:28] -rw-r--r--. 1 boinc boinc      8192 Oct 12 19:25 boinc_mmap_file
[2025-10-12 19:25:28] -rw-r--r--. 1 boinc boinc     20620 Oct 12 19:25 stderr.txt
[2025-10-12 19:25:28] HITS file was successfully produced:
[2025-10-12 19:25:28] -rw-------. 1 boinc boinc 200694158 Oct 12 19:21 shared/HITS.pool.root.1
[2025-10-12 19:25:28]  *** Contents of shared directory: ***
[2025-10-12 19:25:28] total 413760
[2025-10-12 19:25:28] -rw-r--r--. 2 boinc boinc 219851249 Oct 12 15:02 ATLAS.root_0
[2025-10-12 19:25:28] -rw-r--r--. 2 boinc boinc     15120 Oct 12 15:02 start_atlas.sh
[2025-10-12 19:25:28] -rw-r--r--. 2 boinc boinc    569679 Oct 12 15:02 input.tar.gz
[2025-10-12 19:25:28] -rw-------. 1 boinc boinc 200694158 Oct 12 19:21 HITS.pool.root.1
[2025-10-12 19:25:28] -rw-------. 1 boinc boinc   2549760 Oct 12 19:25 result.tar.gz
19:25:29 (21672): run_atlas exited; CPU time 57349.704244
19:25:29 (21672): called boinc_finish(0)

</stderr_txt>
]]>

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