Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:02:54 (3390129): wrapper (7.7.26015): starting
09:02:54 (3390129): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 09:02:54] Arguments: --nthreads 8
[2025-10-12 09:02:54] Threads: 8
[2025-10-12 09:02:54] Checking for CVMFS
[2025-10-12 09:02:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 09:02:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 09:02:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 09:02:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 09:02:55] 2.10.1.0 4440 187106 164596 151620 0 57 16587066 18432001 3683 130560 2 225033647 99.991 7138922 5570 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-10-12 09:02:55] CVMFS is ok
[2025-10-12 09:02:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 09:02:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 09:02:55] Further information can be found at the LHC@home message board.
[2025-10-12 09:02:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 09:02:55] Checking for apptainer binary...
[2025-10-12 09:02:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 09:02:55] Running /usr/bin/apptainer --version
[2025-10-12 09:02:55] apptainer version 1.1.9-1.el8
[2025-10-12 09:02:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 09:02:55] c-16-31.aglt2.org
[2025-10-12 09:02:55] apptainer works
[2025-10-12 09:02:56] Set ATHENA_PROC_NUMBER=8
[2025-10-12 09:02:56] Set ATHENA_CORE_NUMBER=8
[2025-10-12 09:02:56] Starting ATLAS job with PandaID=6839318400
[2025-10-12 09:02:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 11:34:29]  *** The last 200 lines of the pilot log: ***
[2025-10-12 11:34:29] 2025-10-12 15:33:29,356 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 11:34:29] 2025-10-12 15:33:29,356 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 11:34:29] 2025-10-12 15:33:29,360 | INFO     | fitting pss+swap vs Time
[2025-10-12 11:34:29] 2025-10-12 15:33:29,361 | INFO     | sum of square deviations: 1005179777.0
[2025-10-12 11:34:29] 2025-10-12 15:33:29,362 | INFO     | sum of deviations: 5200332197.499996
[2025-10-12 11:34:29] 2025-10-12 15:33:29,362 | INFO     | mean x: 1760278697.5
[2025-10-12 11:34:29] 2025-10-12 15:33:29,362 | INFO     | mean y: 2486629.4256756757
[2025-10-12 11:34:29] 2025-10-12 15:33:29,362 | INFO     | -- intersect: -9104375840.990505
[2025-10-12 11:34:29] 2025-10-12 15:33:29,363 | INFO     | intersect: -9104375840.990505
[2025-10-12 11:34:29] 2025-10-12 15:33:29,363 | INFO     | chi2: 2.1277969107488692
[2025-10-12 11:34:29] 2025-10-12 15:33:29,363 | INFO     | sum of square deviations: 906703512.0
[2025-10-12 11:34:29] 2025-10-12 15:33:29,364 | INFO     | sum of deviations: 13989808442.0
[2025-10-12 11:34:29] 2025-10-12 15:33:29,365 | INFO     | mean x: 1760278545.0
[2025-10-12 11:34:29] 2025-10-12 15:33:29,365 | INFO     | mean y: 2499846.013986014
[2025-10-12 11:34:29] 2025-10-12 15:33:29,365 | INFO     | -- intersect: -27157381331.453514
[2025-10-12 11:34:29] 2025-10-12 15:33:29,365 | INFO     | intersect: -27157381331.453514
[2025-10-12 11:34:29] 2025-10-12 15:33:29,365 | INFO     | chi2: 1.4455147426364574
[2025-10-12 11:34:29] 2025-10-12 15:33:29,366 | INFO     | current chi2=1.4455147426364574 (change=32.065192155593714 %)
[2025-10-12 11:34:29] 2025-10-12 15:33:29,366 | INFO     | sum of square deviations: 814878534.5
[2025-10-12 11:34:29] 2025-10-12 15:33:29,367 | INFO     | sum of deviations: 13293539466.499998
[2025-10-12 11:34:29] 2025-10-12 15:33:29,367 | INFO     | mean x: 1760278392.5
[2025-10-12 11:34:29] 2025-10-12 15:33:29,367 | INFO     | mean y: 2498689.2536231885
[2025-10-12 11:34:29] 2025-10-12 15:33:29,367 | INFO     | -- intersect: -28713842816.887653
[2025-10-12 11:34:29] 2025-10-12 15:33:29,368 | INFO     | intersect: -28713842816.887653
[2025-10-12 11:34:29] 2025-10-12 15:33:29,368 | INFO     | chi2: 1.4473157555612457
[2025-10-12 11:34:29] 2025-10-12 15:33:29,368 | INFO     | current chi2=1.4473157555612457 (change=-0.1245931896552951 %)
[2025-10-12 11:34:29] 2025-10-12 15:33:29,368 | INFO     | right removable region: 137
[2025-10-12 11:34:29] 2025-10-12 15:33:29,369 | INFO     | sum of square deviations: 906703512.0
[2025-10-12 11:34:29] 2025-10-12 15:33:29,370 | INFO     | sum of deviations: -13666288476.0
[2025-10-12 11:34:29] 2025-10-12 15:33:29,370 | INFO     | mean x: 1760278850.0
[2025-10-12 11:34:29] 2025-10-12 15:33:29,370 | INFO     | mean y: 2515276.4405594408
[2025-10-12 11:34:29] 2025-10-12 15:33:29,370 | INFO     | -- intersect: 26534317838.04962
[2025-10-12 11:34:29] 2025-10-12 15:33:29,370 | INFO     | intersect: 26534317838.04962
[2025-10-12 11:34:29] 2025-10-12 15:33:29,371 | INFO     | chi2: 0.8320447866958134
[2025-10-12 11:34:29] 2025-10-12 15:33:29,371 | INFO     | current chi2=0.8320447866958134 (change=60.89641908526981 %)
[2025-10-12 11:34:29] 2025-10-12 15:33:29,371 | INFO     | sum of square deviations: 814878534.5
[2025-10-12 11:34:29] 2025-10-12 15:33:29,372 | INFO     | sum of deviations: -6435114693.499999
[2025-10-12 11:34:29] 2025-10-12 15:33:29,372 | INFO     | mean x: 1760279002.5
[2025-10-12 11:34:29] 2025-10-12 15:33:29,373 | INFO     | mean y: 2503248.731884058
[2025-10-12 11:34:29] 2025-10-12 15:33:29,373 | INFO     | -- intersect: 13903467372.909916
[2025-10-12 11:34:29] 2025-10-12 15:33:29,373 | INFO     | intersect: 13903467372.909916
[2025-10-12 11:34:29] 2025-10-12 15:33:29,373 | INFO     | chi2: 0.7592541117944491
[2025-10-12 11:34:29] 2025-10-12 15:33:29,373 | INFO     | current chi2=0.7592541117944491 (change=8.748408266630452 %)
[2025-10-12 11:34:29] 2025-10-12 15:33:29,374 | INFO     | left removable region: 20
[2025-10-12 11:34:29] 2025-10-12 15:33:29,374 | INFO     | sum of square deviations: 496597218.0
[2025-10-12 11:34:29] 2025-10-12 15:33:29,375 | INFO     | sum of deviations: 3489662258.0000005
[2025-10-12 11:34:29] 2025-10-12 15:33:29,375 | INFO     | mean x: 1760278972.0
[2025-10-12 11:34:29] 2025-10-12 15:33:29,375 | INFO     | mean y: 2514122.128205128
[2025-10-12 11:34:29] 2025-10-12 15:33:29,375 | INFO     | -- intersect: -12367227127.891123
[2025-10-12 11:34:29] 2025-10-12 15:33:29,375 | INFO     | intersect: -12367227127.891123
[2025-10-12 11:34:29] 2025-10-12 15:33:29,376 | INFO     | chi2: 0.0002634180375451691
[2025-10-12 11:34:29] 2025-10-12 15:33:29,376 | INFO     | -- intersect: -12367227127.891123
[2025-10-12 11:34:29] 2025-10-12 15:33:29,376 | INFO     | current memory leak: 7.03 B/s (using 117 data points, chi2=0.00)
[2025-10-12 11:34:29] 2025-10-12 15:33:29,376 | INFO     | could have reported an average CPU frequency of 2938 MHz (8 samples)
[2025-10-12 11:34:29] 2025-10-12 15:33:29,377 | INFO     | ..............................
[2025-10-12 11:34:29] 2025-10-12 15:33:29,377 | INFO     | . Timing measurements:
[2025-10-12 11:34:29] 2025-10-12 15:33:29,377 | INFO     | . get job = 0 s
[2025-10-12 11:34:29] 2025-10-12 15:33:29,377 | INFO     | . initial setup = 2 s
[2025-10-12 11:34:29] 2025-10-12 15:33:29,377 | INFO     | . payload setup = 5 s
[2025-10-12 11:34:29] 2025-10-12 15:33:29,378 | INFO     | . stage-in = 0 s
[2025-10-12 11:34:29] 2025-10-12 15:33:29,378 | INFO     | . payload execution = 8990 s
[2025-10-12 11:34:29] 2025-10-12 15:33:29,378 | INFO     | . stage-out = 0 s
[2025-10-12 11:34:29] 2025-10-12 15:33:29,378 | INFO     | . log creation = 0 s
[2025-10-12 11:34:29] 2025-10-12 15:33:29,378 | INFO     | ..............................
[2025-10-12 11:34:29] 2025-10-12 15:33:30,003 | INFO     | 
[2025-10-12 11:34:29] 2025-10-12 15:33:30,003 | INFO     | job summary report
[2025-10-12 11:34:29] 2025-10-12 15:33:30,003 | INFO     | --------------------------------------------------
[2025-10-12 11:34:29] 2025-10-12 15:33:30,003 | INFO     | PanDA job id: 6839318400
[2025-10-12 11:34:29] 2025-10-12 15:33:30,003 | INFO     | task id: 46676269
[2025-10-12 11:34:29] 2025-10-12 15:33:30,004 | INFO     | errors: (none)
[2025-10-12 11:34:29] 2025-10-12 15:33:30,004 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 11:34:29] 2025-10-12 15:33:30,004 | INFO     | pilot state: finished 
[2025-10-12 11:34:29] 2025-10-12 15:33:30,004 | INFO     | transexitcode: 0
[2025-10-12 11:34:29] 2025-10-12 15:33:30,004 | INFO     | exeerrorcode: 0
[2025-10-12 11:34:29] 2025-10-12 15:33:30,004 | INFO     | exeerrordiag: 
[2025-10-12 11:34:29] 2025-10-12 15:33:30,005 | INFO     | exitcode: 0
[2025-10-12 11:34:29] 2025-10-12 15:33:30,005 | INFO     | exitmsg: OK
[2025-10-12 11:34:29] 2025-10-12 15:33:30,005 | INFO     | cpuconsumptiontime: 67910 s
[2025-10-12 11:34:29] 2025-10-12 15:33:30,005 | INFO     | nevents: 400
[2025-10-12 11:34:29] 2025-10-12 15:33:30,005 | INFO     | neventsw: 0
[2025-10-12 11:34:29] 2025-10-12 15:33:30,005 | INFO     | pid: 3401995
[2025-10-12 11:34:29] 2025-10-12 15:33:30,005 | INFO     | pgrp: 3401995
[2025-10-12 11:34:29] 2025-10-12 15:33:30,006 | INFO     | corecount: 8
[2025-10-12 11:34:29] 2025-10-12 15:33:30,006 | INFO     | event service: False
[2025-10-12 11:34:29] 2025-10-12 15:33:30,006 | INFO     | sizes: {0: 2348687, 1: 2348886, 5: 2349148, 12: 2349204, 8999: 2377344, 9000: 2386342, 9001: 2386526, 9005: 2386720}
[2025-10-12 11:34:29] 2025-10-12 15:33:30,006 | INFO     | --------------------------------------------------
[2025-10-12 11:34:29] 2025-10-12 15:33:30,006 | INFO     | 
[2025-10-12 11:34:29] 2025-10-12 15:33:30,007 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-12 11:34:29] 2025-10-12 15:33:30,028 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 11:34:29] 2025-10-12 15:33:30,029 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 11:34:29] 2025-10-12 15:33:30,029 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 11:34:29] 2025-10-12 15:33:30,029 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 11:34:29] 2025-10-12 15:33:30,030 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 11:34:29] 2025-10-12 15:33:30,030 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 11:34:29] 2025-10-12 15:33:30,030 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 11:34:29] 2025-10-12 15:33:30,030 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 11:34:29] 2025-10-12 15:33:30,030 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 11:34:29] 2025-10-12 15:33:30,030 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 11:34:29] 2025-10-12 15:33:30,031 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 11:34:29] 2025-10-12 15:33:30,031 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 11:34:29] 2025-10-12 15:33:30,031 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 11:34:29] 2025-10-12 15:33:30,031 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 11:34:29] 2025-10-12 15:33:30,032 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 11:34:29] 2025-10-12 15:33:30,032 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 11:34:29] 2025-10-12 15:33:30,032 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 11:34:29] 2025-10-12 15:33:30,032 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 11:34:29] 2025-10-12 15:33:30,032 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 11:34:29] 2025-10-12 15:33:30,033 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 11:34:29] 2025-10-12 15:33:30,033 | INFO     | job 6839318400 has completed (purged errors)
[2025-10-12 11:34:29] 2025-10-12 15:33:30,033 | INFO     | overall cleanup function is called
[2025-10-12 11:34:29] 2025-10-12 15:33:31,043 | INFO     | --- collectZombieJob: --- 10, [3401995]
[2025-10-12 11:34:29] 2025-10-12 15:33:31,043 | INFO     | zombie collector waiting for pid 3401995
[2025-10-12 11:34:29] 2025-10-12 15:33:31,043 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 11:34:29] 2025-10-12 15:33:31,043 | INFO     | collected zombie processes
[2025-10-12 11:34:29] 2025-10-12 15:33:31,043 | INFO     | will attempt to kill all subprocesses of pid=3401995
[2025-10-12 11:34:29] 2025-10-12 15:33:31,336 | INFO     | process IDs to be killed: [3401995] (in reverse order)
[2025-10-12 11:34:29] 2025-10-12 15:33:31,432 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 11:34:29] 2025-10-12 15:33:31,432 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 11:34:29] 2025-10-12 15:33:31,451 | INFO     | did not find any defunct processes belonging to 3401995
[2025-10-12 11:34:29] 2025-10-12 15:33:31,465 | INFO     | did not find any defunct processes belonging to 3401995
[2025-10-12 11:34:29] 2025-10-12 15:33:31,466 | INFO     | ready for new job
[2025-10-12 11:34:29] 2025-10-12 15:33:31,466 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 11:34:29] 2025-10-12 15:33:31,468 | INFO     | ***************************************
[2025-10-12 11:34:29] 2025-10-12 15:33:31,469 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 11:34:29] 2025-10-12 15:33:31,469 | INFO     | ***************************************
[2025-10-12 11:34:29] 2025-10-12 15:33:31,469 | INFO     | 
[2025-10-12 11:34:29] 2025-10-12 15:33:31,483 | INFO     | architecture information:
[2025-10-12 11:34:29] 2025-10-12 15:33:31,483 | INFO     | executing command: cat /etc/os-release
[2025-10-12 11:34:29] 2025-10-12 15:33:31,495 | INFO     | cat /etc/os-release:
[2025-10-12 11:34:29] NAME="CentOS Linux"
[2025-10-12 11:34:29] VERSION="7 (Core)"
[2025-10-12 11:34:29] ID="centos"
[2025-10-12 11:34:29] ID_LIKE="rhel fedora"
[2025-10-12 11:34:29] VERSION_ID="7"
[2025-10-12 11:34:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 11:34:29] ANSI_COLOR="0;31"
[2025-10-12 11:34:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 11:34:29] HOME_URL="https://www.centos.org/"
[2025-10-12 11:34:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 11:34:29] 
[2025-10-12 11:34:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 11:34:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 11:34:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 11:34:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 11:34:29] 
[2025-10-12 11:34:29] 2025-10-12 15:33:31,496 | INFO     | ***************************************
[2025-10-12 11:34:29] 2025-10-12 15:33:31,999 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-12 11:34:29] 2025-10-12 15:33:32,013 | INFO     | sufficient remaining disk space (103565754368 B)
[2025-10-12 11:34:29] 2025-10-12 15:33:32,013 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 11:34:29] 2025-10-12 15:33:32,014 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 11:34:29] 2025-10-12 15:33:32,014 | INFO     | update_server=False
[2025-10-12 11:34:29] 2025-10-12 15:33:32,014 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 11:34:29] 2025-10-12 15:33:32,014 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 11:34:29] 2025-10-12 15:33:32,015 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:34:29] 2025-10-12 15:33:32,015 | INFO     | aborting loop
[2025-10-12 11:34:29] 2025-10-12 15:33:32,370 | INFO     | all data control threads have been joined
[2025-10-12 11:34:29] 2025-10-12 15:33:32,643 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 11:34:29] 2025-10-12 15:33:32,848 | INFO     | all job control threads have been joined
[2025-10-12 11:34:29] 2025-10-12 15:33:33,019 | INFO     | [job] retrieve thread has finished
[2025-10-12 11:34:29] 2025-10-12 15:33:33,020 | INFO     | [job] job monitor thread has finished
[2025-10-12 11:34:29] 2025-10-12 15:33:33,242 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 11:34:29] 2025-10-12 15:33:33,375 | INFO     | [data] control thread has finished
[2025-10-12 11:34:29] 2025-10-12 15:33:33,441 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 11:34:29] 2025-10-12 15:33:33,453 | INFO     | all payload control threads have been joined
[2025-10-12 11:34:29] 2025-10-12 15:33:33,496 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 11:34:29] 2025-10-12 15:33:33,538 | INFO     | [data] copytool_in thread has finished
[2025-10-12 11:34:29] 2025-10-12 15:33:33,853 | INFO     | [job] control thread has finished
[2025-10-12 11:34:29] 2025-10-12 15:33:33,932 | INFO     | [job] validate thread has finished
[2025-10-12 11:34:29] 2025-10-12 15:33:33,997 | INFO     | [payload] validate_post thread has finished
[2025-10-12 11:34:29] 2025-10-12 15:33:34,223 | INFO     | [payload] failed_post thread has finished
[2025-10-12 11:34:29] 2025-10-12 15:33:34,454 | INFO     | [payload] control thread has finished
[2025-10-12 11:34:29] 2025-10-12 15:33:34,538 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 11:34:29] 2025-10-12 15:33:34,648 | INFO     | [data] copytool_out thread has finished
[2025-10-12 11:34:29] 2025-10-12 15:33:35,543 | INFO     | [job] queue monitor thread has finished
[2025-10-12 11:34:29] 2025-10-12 15:33:36,018 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 11:34:29] 2025-10-12 15:33:42,846 | INFO     | job.realtimelogging is not enabled
[2025-10-12 11:34:29] 2025-10-12 15:33:43,852 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 11:34:29] 2025-10-12 15:34:01,766 | INFO     | PID=3395658 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 11:34:29] 2025-10-12 15:34:01,766 | INFO     | .. there are 5 such processes running
[2025-10-12 11:34:29] 2025-10-12 15:34:01,767 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 11:34:29] 2025-10-12 15:34:01,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 11:34:29] 2025-10-12 15:34:01,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 11:34:29] 2025-10-12 15:34:22,445 | INFO     | [monitor] cgroup control has ended
[2025-10-12 11:34:29] 2025-10-12 15:34:23,581 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140354414978880)>', '<ExcThread(monitor, started 140353751475968)>']
[2025-10-12 11:34:29] 2025-10-12 15:34:23,864 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 11:34:29] 2025-10-12 15:34:23,864 | INFO     | [monitor] control thread has ended
[2025-10-12 11:34:29] 2025-10-12 15:34:28,607 | INFO     | all workflow threads have been joined
[2025-10-12 11:34:29] 2025-10-12 15:34:28,607 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 11:34:29] 2025-10-12 15:34:28,608 | INFO     | traces error code: 0
[2025-10-12 11:34:29] 2025-10-12 15:34:28,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 11:34:29] 2025-10-12 15:34:28,731 [wrapper] ==== pilot stdout END ====
[2025-10-12 11:34:29] 2025-10-12 15:34:28,734 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 11:34:29] 2025-10-12 15:34:28,736 [wrapper] pilotpid: 3395658
[2025-10-12 11:34:29] 2025-10-12 15:34:28,738 [wrapper] Pilot exit status: 0
[2025-10-12 11:34:29] 2025-10-12 15:34:28,748 [wrapper] pandaids: 6839318400
[2025-10-12 11:34:29] 2025-10-12 15:34:28,809 [wrapper] cleanup supervisor_pilot 1472258 3395659
[2025-10-12 11:34:29] 2025-10-12 15:34:28,812 [wrapper] Test setup, not cleaning
[2025-10-12 11:34:29] 2025-10-12 15:34:28,815 [wrapper] apfmon messages muted
[2025-10-12 11:34:29] 2025-10-12 15:34:28,817 [wrapper] ==== wrapper stdout END ====
[2025-10-12 11:34:29] 2025-10-12 15:34:28,819 [wrapper] ==== wrapper stderr END ====
[2025-10-12 11:34:29]  *** Error codes and diagnostics ***
[2025-10-12 11:34:29]     "exeErrorCode": 0,
[2025-10-12 11:34:29]     "exeErrorDiag": "",
[2025-10-12 11:34:29]     "pilotErrorCode": 0,
[2025-10-12 11:34:29]     "pilotErrorDiag": "",
[2025-10-12 11:34:29]  *** Listing of results directory ***
[2025-10-12 11:34:29] total 406068
[2025-10-12 11:34:29] -rw-r--r-- 1 boincer umatlas    557409 Oct 11 22:56 pilot3.tar.gz
[2025-10-12 11:34:29] -rw-r--r-- 1 boincer umatlas      5112 Oct 11 23:00 queuedata.json
[2025-10-12 11:34:29] -rwx------ 1 boincer umatlas     36292 Oct 11 23:00 runpilot2-wrapper.sh
[2025-10-12 11:34:29] -rw-r--r-- 1 boincer umatlas       100 Oct 12 09:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 11:34:29] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 09:02 run_atlas
[2025-10-12 11:34:29] -rw-r--r-- 1 boincer umatlas       105 Oct 12 09:02 job.xml
[2025-10-12 11:34:29] -rw-r--r-- 2 boincer umatlas 218514800 Oct 12 09:02 EVNT.46676267._003204.pool.root.1
[2025-10-12 11:34:29] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:02 start_atlas.sh
[2025-10-12 11:34:29] drwxrwx--x 2 boincer umatlas      4096 Oct 12 09:02 shared
[2025-10-12 11:34:29] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 09:02 input.tar.gz
[2025-10-12 11:34:29] -rw-r--r-- 1 boincer umatlas         0 Oct 12 09:02 boinc_lockfile
[2025-10-12 11:34:29] -rw-r--r-- 1 boincer umatlas      2551 Oct 12 09:02 pandaJob.out
[2025-10-12 11:34:29] -rw------- 1 boincer umatlas    975512 Oct 12 09:03 agis_schedconf.cvmfs.json
[2025-10-12 11:34:29] -rw------- 1 boincer umatlas   1560580 Oct 12 09:03 agis_ddmendpoints.agis.ALL.json
[2025-10-12 11:34:29] drwx------ 5 boincer umatlas      4096 Oct 12 09:03 pilot3
[2025-10-12 11:34:29] -rw-r--r-- 1 boincer umatlas      6013 Oct 12 11:28 init_data.xml
[2025-10-12 11:34:29] -rw------- 1 boincer umatlas 190042348 Oct 12 11:32 HITS.46676269._069821.pool.root.1
[2025-10-12 11:34:29] -rw-r--r-- 1 boincer umatlas       529 Oct 12 11:33 boinc_task_state.xml
[2025-10-12 11:34:29] -rw------- 1 boincer umatlas      1050 Oct 12 11:33 memory_monitor_summary.json
[2025-10-12 11:34:29] -rw------- 1 boincer umatlas    396947 Oct 12 11:33 log.46676269._069821.job.log.tgz.1
[2025-10-12 11:34:29] -rw------- 1 boincer umatlas      7828 Oct 12 11:33 heartbeat.json
[2025-10-12 11:34:29] -rw------- 1 boincer umatlas        95 Oct 12 11:34 pilot_heartbeat.json
[2025-10-12 11:34:29] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 11:34 boinc_mmap_file
[2025-10-12 11:34:29] -rw-r--r-- 1 boincer umatlas        27 Oct 12 11:34 wrapper_checkpoint.txt
[2025-10-12 11:34:29] -rw------- 1 boincer umatlas      4896 Oct 12 11:34 pilotlog.txt
[2025-10-12 11:34:29] -rw------- 1 boincer umatlas   1278242 Oct 12 11:34 log.46676269._069821.job.log.1
[2025-10-12 11:34:29] -rw------- 1 boincer umatlas       357 Oct 12 11:34 output.list
[2025-10-12 11:34:29] -rw-r--r-- 1 boincer umatlas       620 Oct 12 11:34 runtime_log
[2025-10-12 11:34:29] -rw------- 1 boincer umatlas   1689600 Oct 12 11:34 result.tar.gz
[2025-10-12 11:34:29] -rw------- 1 boincer umatlas       658 Oct 12 11:34 sBoLDmSV1R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnQiNDmGaooWn.diag
[2025-10-12 11:34:29] -rw-r--r-- 1 boincer umatlas      8698 Oct 12 11:34 runtime_log.err
[2025-10-12 11:34:29] -rw-r--r-- 1 boincer umatlas     20896 Oct 12 11:34 stderr.txt
[2025-10-12 11:34:29] HITS file was successfully produced:
[2025-10-12 11:34:29] -rw------- 1 boincer umatlas 190042348 Oct 12 11:32 shared/HITS.pool.root.1
[2025-10-12 11:34:29]  *** Contents of shared directory: ***
[2025-10-12 11:34:29] total 401224
[2025-10-12 11:34:29] -rw-r--r-- 2 boincer umatlas 218514800 Oct 12 09:02 ATLAS.root_0
[2025-10-12 11:34:29] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 09:02 start_atlas.sh
[2025-10-12 11:34:29] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 09:02 input.tar.gz
[2025-10-12 11:34:29] -rw------- 1 boincer umatlas 190042348 Oct 12 11:32 HITS.pool.root.1
[2025-10-12 11:34:29] -rw------- 1 boincer umatlas   1689600 Oct 12 11:34 result.tar.gz
11:34:30 (3390129): run_atlas exited; CPU time 68227.923185
11:34:30 (3390129): called boinc_finish(0)

</stderr_txt>
]]>

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