Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:57:12 (6705): wrapper (7.7.26015): starting
08:57:12 (6705): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 08:57:12] Arguments: --nthreads 8
[2025-10-12 08:57:12] Threads: 8
[2025-10-12 08:57:12] Checking for CVMFS
[2025-10-12 08:57:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:57:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:57:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:57:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:57:12] 2.11.2.0 2830 8526 74356 151620 1 59 16373204 20275201 1 130560 0 5121762 99.988 288207 35181 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 08:57:12] CVMFS is ok
[2025-10-12 08:57:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:57:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:57:12] Further information can be found at the LHC@home message board.
[2025-10-12 08:57:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:57:12] Checking for apptainer binary...
[2025-10-12 08:57:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:57:12] Running /usr/bin/apptainer --version
[2025-10-12 08:57:13] apptainer version 1.3.2-1.el7
[2025-10-12 08:57:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:57:14] c-204-20.aglt2.org
[2025-10-12 08:57:14] apptainer works
[2025-10-12 08:57:14] Set ATHENA_PROC_NUMBER=8
[2025-10-12 08:57:14] Set ATHENA_CORE_NUMBER=8
[2025-10-12 08:57:14] Starting ATLAS job with PandaID=6839774628
[2025-10-12 08:57:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 10:59:49]  *** The last 200 lines of the pilot log: ***
[2025-10-12 10:59:49] 2025-10-12 14:59:10,592 | INFO     | PID=10403 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 10:59:49] 2025-10-12 14:59:11,391 | INFO     | monitor loop #540: job 0:6839774628 is in state 'finished'
[2025-10-12 10:59:49] 2025-10-12 14:59:11,391 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 10:59:49] 2025-10-12 14:59:11,593 | INFO     | time since job start (7299s) is within the limit (172800.0s)
[2025-10-12 10:59:49] 2025-10-12 14:59:13,185 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 10:59:49] 2025-10-12 14:59:13,189 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1662.5
[2025-10-12 10:59:49] 2025-10-12 14:59:13,191 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6839774628/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 10:59:49] 2025-10-12 14:59:13,192 | INFO     | extracted standard info from prmon json
[2025-10-12 10:59:49] 2025-10-12 14:59:13,192 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 10:59:49] 2025-10-12 14:59:13,192 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 10:59:49] 2025-10-12 14:59:13,192 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 10:59:49] 2025-10-12 14:59:13,193 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 10:59:49] 2025-10-12 14:59:13,196 | INFO     | fitting pss+swap vs Time
[2025-10-12 10:59:49] 2025-10-12 14:59:13,197 | INFO     | sum of square deviations: 522502820.0
[2025-10-12 10:59:49] 2025-10-12 14:59:13,197 | INFO     | sum of deviations: 10192764500.000002
[2025-10-12 10:59:49] 2025-10-12 14:59:13,198 | INFO     | mean x: 1760277482.0
[2025-10-12 10:59:49] 2025-10-12 14:59:13,198 | INFO     | mean y: 2508569.1764705884
[2025-10-12 10:59:49] 2025-10-12 14:59:13,198 | INFO     | -- intersect: -34336241657.432816
[2025-10-12 10:59:49] 2025-10-12 14:59:13,198 | INFO     | intersect: -34336241657.432816
[2025-10-12 10:59:49] 2025-10-12 14:59:13,198 | INFO     | chi2: 1.4821868972977847
[2025-10-12 10:59:49] 2025-10-12 14:59:13,198 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 10:59:49] 2025-10-12 14:59:13,199 | INFO     | sum of deviations: 9692027517.000002
[2025-10-12 10:59:49] 2025-10-12 14:59:13,199 | INFO     | mean x: 1760277329.5
[2025-10-12 10:59:49] 2025-10-12 14:59:13,199 | INFO     | mean y: 2507359.350877193
[2025-10-12 10:59:49] 2025-10-12 14:59:13,199 | INFO     | -- intersect: -37137003112.87312
[2025-10-12 10:59:49] 2025-10-12 14:59:13,200 | INFO     | intersect: -37137003112.87312
[2025-10-12 10:59:49] 2025-10-12 14:59:13,200 | INFO     | chi2: 1.484784809901618
[2025-10-12 10:59:49] 2025-10-12 14:59:13,200 | INFO     | current chi2=1.484784809901618 (change=-0.17527564226682057 %)
[2025-10-12 10:59:49] 2025-10-12 14:59:13,200 | INFO     | right removable region: 113
[2025-10-12 10:59:49] 2025-10-12 14:59:13,200 | INFO     | sum of square deviations: 459366752.5
[2025-10-12 10:59:49] 2025-10-12 14:59:13,201 | INFO     | sum of deviations: -6903817068.999999
[2025-10-12 10:59:49] 2025-10-12 14:59:13,201 | INFO     | mean x: 1760277634.5
[2025-10-12 10:59:49] 2025-10-12 14:59:13,201 | INFO     | mean y: 2549025.4210526315
[2025-10-12 10:59:49] 2025-10-12 14:59:13,201 | INFO     | -- intersect: 26457739160.75859
[2025-10-12 10:59:49] 2025-10-12 14:59:13,201 | INFO     | intersect: 26457739160.75859
[2025-10-12 10:59:49] 2025-10-12 14:59:13,202 | INFO     | chi2: 0.0813528804871941
[2025-10-12 10:59:49] 2025-10-12 14:59:13,202 | INFO     | current chi2=0.0813528804871941 (change=94.5112940456085 %)
[2025-10-12 10:59:49] 2025-10-12 14:59:13,202 | INFO     | sum of square deviations: 401533110.0
[2025-10-12 10:59:49] 2025-10-12 14:59:13,203 | INFO     | sum of deviations: -4539464083.999999
[2025-10-12 10:59:49] 2025-10-12 14:59:13,203 | INFO     | mean x: 1760277787.0
[2025-10-12 10:59:49] 2025-10-12 14:59:13,203 | INFO     | mean y: 2542677.137614679
[2025-10-12 10:59:49] 2025-10-12 14:59:13,203 | INFO     | -- intersect: 19903062940.459114
[2025-10-12 10:59:49] 2025-10-12 14:59:13,203 | INFO     | intersect: 19903062940.459114
[2025-10-12 10:59:49] 2025-10-12 14:59:13,203 | INFO     | chi2: 0.06355975421905903
[2025-10-12 10:59:49] 2025-10-12 14:59:13,203 | INFO     | current chi2=0.06355975421905903 (change=21.871538120811742 %)
[2025-10-12 10:59:49] 2025-10-12 14:59:13,204 | INFO     | left removable region: 20
[2025-10-12 10:59:49] 2025-10-12 14:59:13,204 | INFO     | sum of square deviations: 249388862.0
[2025-10-12 10:59:49] 2025-10-12 14:59:13,204 | INFO     | sum of deviations: 876880368.0
[2025-10-12 10:59:49] 2025-10-12 14:59:13,204 | INFO     | mean x: 1760277909.0
[2025-10-12 10:59:49] 2025-10-12 14:59:13,205 | INFO     | mean y: 2525573.2473118277
[2025-10-12 10:59:49] 2025-10-12 14:59:13,205 | INFO     | -- intersect: -6186817159.413261
[2025-10-12 10:59:49] 2025-10-12 14:59:13,205 | INFO     | intersect: -6186817159.413261
[2025-10-12 10:59:49] 2025-10-12 14:59:13,205 | INFO     | chi2: 0.00017196932749932066
[2025-10-12 10:59:49] 2025-10-12 14:59:13,205 | INFO     | -- intersect: -6186817159.413261
[2025-10-12 10:59:49] 2025-10-12 14:59:13,205 | INFO     | current memory leak: 3.52 B/s (using 93 data points, chi2=0.00)
[2025-10-12 10:59:49] 2025-10-12 14:59:13,206 | INFO     | could have reported an average CPU frequency of 1969 MHz (7 samples)
[2025-10-12 10:59:49] 2025-10-12 14:59:13,206 | INFO     | ..............................
[2025-10-12 10:59:49] 2025-10-12 14:59:13,206 | INFO     | . Timing measurements:
[2025-10-12 10:59:49] 2025-10-12 14:59:13,206 | INFO     | . get job = 0 s
[2025-10-12 10:59:49] 2025-10-12 14:59:13,206 | INFO     | . initial setup = 2 s
[2025-10-12 10:59:49] 2025-10-12 14:59:13,206 | INFO     | . payload setup = 8 s
[2025-10-12 10:59:49] 2025-10-12 14:59:13,206 | INFO     | . stage-in = 0 s
[2025-10-12 10:59:49] 2025-10-12 14:59:13,207 | INFO     | . payload execution = 7261 s
[2025-10-12 10:59:49] 2025-10-12 14:59:13,207 | INFO     | . stage-out = 0 s
[2025-10-12 10:59:49] 2025-10-12 14:59:13,207 | INFO     | . log creation = 0 s
[2025-10-12 10:59:49] 2025-10-12 14:59:13,207 | INFO     | ..............................
[2025-10-12 10:59:49] 2025-10-12 14:59:13,300 | INFO     | 
[2025-10-12 10:59:49] 2025-10-12 14:59:13,300 | INFO     | job summary report
[2025-10-12 10:59:49] 2025-10-12 14:59:13,301 | INFO     | --------------------------------------------------
[2025-10-12 10:59:49] 2025-10-12 14:59:13,301 | INFO     | PanDA job id: 6839774628
[2025-10-12 10:59:49] 2025-10-12 14:59:13,301 | INFO     | task id: 46676269
[2025-10-12 10:59:49] 2025-10-12 14:59:13,301 | INFO     | errors: (none)
[2025-10-12 10:59:49] 2025-10-12 14:59:13,301 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 10:59:49] 2025-10-12 14:59:13,301 | INFO     | pilot state: finished 
[2025-10-12 10:59:49] 2025-10-12 14:59:13,301 | INFO     | transexitcode: 0
[2025-10-12 10:59:49] 2025-10-12 14:59:13,301 | INFO     | exeerrorcode: 0
[2025-10-12 10:59:49] 2025-10-12 14:59:13,301 | INFO     | exeerrordiag: 
[2025-10-12 10:59:49] 2025-10-12 14:59:13,302 | INFO     | exitcode: 0
[2025-10-12 10:59:49] 2025-10-12 14:59:13,302 | INFO     | exitmsg: OK
[2025-10-12 10:59:49] 2025-10-12 14:59:13,302 | INFO     | cpuconsumptiontime: 54473 s
[2025-10-12 10:59:49] 2025-10-12 14:59:13,302 | INFO     | nevents: 400
[2025-10-12 10:59:49] 2025-10-12 14:59:13,302 | INFO     | neventsw: 0
[2025-10-12 10:59:49] 2025-10-12 14:59:13,302 | INFO     | pid: 17758
[2025-10-12 10:59:49] 2025-10-12 14:59:13,302 | INFO     | pgrp: 17758
[2025-10-12 10:59:49] 2025-10-12 14:59:13,302 | INFO     | corecount: 8
[2025-10-12 10:59:49] 2025-10-12 14:59:13,303 | INFO     | event service: False
[2025-10-12 10:59:49] 2025-10-12 14:59:13,303 | INFO     | sizes: {0: 2348029, 1: 2348885, 7: 2349147, 12: 2349175, 7274: 2376485, 7275: 2385483, 7279: 2385667, 7284: 2385861}
[2025-10-12 10:59:49] 2025-10-12 14:59:13,303 | INFO     | --------------------------------------------------
[2025-10-12 10:59:49] 2025-10-12 14:59:13,303 | INFO     | 
[2025-10-12 10:59:49] 2025-10-12 14:59:13,303 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 10:59:49] 2025-10-12 14:59:13,332 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 10:59:49] 2025-10-12 14:59:13,332 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 10:59:49] 2025-10-12 14:59:13,332 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 10:59:49] 2025-10-12 14:59:13,333 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 10:59:49] 2025-10-12 14:59:13,333 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 10:59:49] 2025-10-12 14:59:13,333 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 10:59:49] 2025-10-12 14:59:13,333 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 10:59:49] 2025-10-12 14:59:13,333 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 10:59:49] 2025-10-12 14:59:13,333 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 10:59:49] 2025-10-12 14:59:13,334 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 10:59:49] 2025-10-12 14:59:13,334 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 10:59:49] 2025-10-12 14:59:13,334 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 10:59:49] 2025-10-12 14:59:13,334 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 10:59:49] 2025-10-12 14:59:13,334 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 10:59:49] 2025-10-12 14:59:13,335 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 10:59:49] 2025-10-12 14:59:13,335 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 10:59:49] 2025-10-12 14:59:13,335 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 10:59:49] 2025-10-12 14:59:13,335 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 10:59:49] 2025-10-12 14:59:13,335 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 10:59:49] 2025-10-12 14:59:13,335 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 10:59:49] 2025-10-12 14:59:13,336 | INFO     | job 6839774628 has completed (purged errors)
[2025-10-12 10:59:49] 2025-10-12 14:59:13,336 | INFO     | overall cleanup function is called
[2025-10-12 10:59:49] 2025-10-12 14:59:14,344 | INFO     | --- collectZombieJob: --- 10, [17758]
[2025-10-12 10:59:49] 2025-10-12 14:59:14,344 | INFO     | zombie collector waiting for pid 17758
[2025-10-12 10:59:49] 2025-10-12 14:59:14,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 10:59:49] 2025-10-12 14:59:14,351 | INFO     | collected zombie processes
[2025-10-12 10:59:49] 2025-10-12 14:59:14,351 | INFO     | will attempt to kill all subprocesses of pid=17758
[2025-10-12 10:59:49] 2025-10-12 14:59:14,441 | INFO     | process IDs to be killed: [17758] (in reverse order)
[2025-10-12 10:59:49] 2025-10-12 14:59:14,499 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 10:59:49] 2025-10-12 14:59:14,500 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 10:59:49] 2025-10-12 14:59:14,506 | INFO     | did not find any defunct processes belonging to 17758
[2025-10-12 10:59:49] 2025-10-12 14:59:14,509 | INFO     | did not find any defunct processes belonging to 17758
[2025-10-12 10:59:49] 2025-10-12 14:59:14,509 | INFO     | ready for new job
[2025-10-12 10:59:49] 2025-10-12 14:59:14,510 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 10:59:49] 2025-10-12 14:59:14,511 | INFO     | ***************************************
[2025-10-12 10:59:49] 2025-10-12 14:59:14,512 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 10:59:49] 2025-10-12 14:59:14,512 | INFO     | ***************************************
[2025-10-12 10:59:49] 2025-10-12 14:59:14,512 | INFO     | 
[2025-10-12 10:59:49] 2025-10-12 14:59:14,512 | INFO     | architecture information:
[2025-10-12 10:59:49] 2025-10-12 14:59:14,513 | INFO     | executing command: cat /etc/os-release
[2025-10-12 10:59:49] 2025-10-12 14:59:14,532 | INFO     | cat /etc/os-release:
[2025-10-12 10:59:49] NAME="CentOS Linux"
[2025-10-12 10:59:49] VERSION="7 (Core)"
[2025-10-12 10:59:49] ID="centos"
[2025-10-12 10:59:49] ID_LIKE="rhel fedora"
[2025-10-12 10:59:49] VERSION_ID="7"
[2025-10-12 10:59:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 10:59:49] ANSI_COLOR="0;31"
[2025-10-12 10:59:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 10:59:49] HOME_URL="https://www.centos.org/"
[2025-10-12 10:59:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 10:59:49] 
[2025-10-12 10:59:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 10:59:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 10:59:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 10:59:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 10:59:49] 
[2025-10-12 10:59:49] 2025-10-12 14:59:14,533 | INFO     | ***************************************
[2025-10-12 10:59:49] 2025-10-12 14:59:15,036 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 10:59:49] 2025-10-12 14:59:15,058 | INFO     | sufficient remaining disk space (18696110080 B)
[2025-10-12 10:59:49] 2025-10-12 14:59:15,059 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 10:59:49] 2025-10-12 14:59:15,059 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 10:59:49] 2025-10-12 14:59:15,059 | INFO     | update_server=False
[2025-10-12 10:59:49] 2025-10-12 14:59:15,060 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 10:59:49] 2025-10-12 14:59:15,060 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 10:59:49] 2025-10-12 14:59:15,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:59:49] 2025-10-12 14:59:15,061 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 10:59:49] 2025-10-12 14:59:15,061 | INFO     | aborting loop
[2025-10-12 10:59:49] 2025-10-12 14:59:15,185 | INFO     | all job control threads have been joined
[2025-10-12 10:59:49] 2025-10-12 14:59:15,803 | INFO     | all payload control threads have been joined
[2025-10-12 10:59:49] 2025-10-12 14:59:15,881 | INFO     | all data control threads have been joined
[2025-10-12 10:59:49] 2025-10-12 14:59:16,065 | INFO     | [job] retrieve thread has finished
[2025-10-12 10:59:49] 2025-10-12 14:59:16,066 | INFO     | [job] queue monitor thread has finished
[2025-10-12 10:59:49] 2025-10-12 14:59:16,067 | INFO     | [job] job monitor thread has finished
[2025-10-12 10:59:49] 2025-10-12 14:59:16,191 | INFO     | [job] control thread has finished
[2025-10-12 10:59:49] 2025-10-12 14:59:16,543 | INFO     | [payload] failed_post thread has finished
[2025-10-12 10:59:49] 2025-10-12 14:59:16,576 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 10:59:49] 2025-10-12 14:59:16,808 | INFO     | [payload] control thread has finished
[2025-10-12 10:59:49] 2025-10-12 14:59:16,887 | INFO     | [data] control thread has finished
[2025-10-12 10:59:49] 2025-10-12 14:59:17,066 | INFO     | [data] copytool_out thread has finished
[2025-10-12 10:59:49] 2025-10-12 14:59:17,133 | INFO     | [payload] validate_post thread has finished
[2025-10-12 10:59:49] 2025-10-12 14:59:17,149 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 10:59:49] 2025-10-12 14:59:17,204 | INFO     | [data] copytool_in thread has finished
[2025-10-12 10:59:49] 2025-10-12 14:59:17,258 | INFO     | [job] validate thread has finished
[2025-10-12 10:59:49] 2025-10-12 14:59:17,272 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 10:59:49] 2025-10-12 14:59:17,318 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 10:59:49] 2025-10-12 14:59:18,193 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 10:59:49] 2025-10-12 14:59:22,199 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 10:59:49] 2025-10-12 14:59:43,646 | INFO     | [monitor] cgroup control has ended
[2025-10-12 10:59:49] 2025-10-12 14:59:44,418 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139970893543232)>', '<ExcThread(monitor, started 139969997813504)>']
[2025-10-12 10:59:49] 2025-10-12 14:59:44,800 | INFO     | PID=10403 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 10:59:49] 2025-10-12 14:59:44,801 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 10:59:49] 2025-10-12 14:59:44,801 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 10:59:49] 2025-10-12 14:59:44,801 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 10:59:49] 2025-10-12 14:59:44,801 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 10:59:49] 2025-10-12 14:59:44,801 | INFO     | [monitor] control thread has ended
[2025-10-12 10:59:49] 2025-10-12 14:59:49,444 | INFO     | all workflow threads have been joined
[2025-10-12 10:59:49] 2025-10-12 14:59:49,444 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 10:59:49] 2025-10-12 14:59:49,444 | INFO     | traces error code: 0
[2025-10-12 10:59:49] 2025-10-12 14:59:49,445 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 10:59:49] 2025-10-12 14:59:49,548 [wrapper] ==== pilot stdout END ====
[2025-10-12 10:59:49] 2025-10-12 14:59:49,552 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 10:59:49] 2025-10-12 14:59:49,557 [wrapper] pilotpid: 10403
[2025-10-12 10:59:49] 2025-10-12 14:59:49,562 [wrapper] Pilot exit status: 0
[2025-10-12 10:59:49] 2025-10-12 14:59:49,580 [wrapper] pandaids: 6839774628
[2025-10-12 10:59:49] 2025-10-12 14:59:49,627 [wrapper] cleanup supervisor_pilot 16366 10404
[2025-10-12 10:59:49] 2025-10-12 14:59:49,631 [wrapper] Test setup, not cleaning
[2025-10-12 10:59:49] 2025-10-12 14:59:49,636 [wrapper] apfmon messages muted
[2025-10-12 10:59:49] 2025-10-12 14:59:49,641 [wrapper] ==== wrapper stdout END ====
[2025-10-12 10:59:49] 2025-10-12 14:59:49,645 [wrapper] ==== wrapper stderr END ====
[2025-10-12 10:59:49]  *** Error codes and diagnostics ***
[2025-10-12 10:59:49]     "exeErrorCode": 0,
[2025-10-12 10:59:49]     "exeErrorDiag": "",
[2025-10-12 10:59:49]     "pilotErrorCode": 0,
[2025-10-12 10:59:49]     "pilotErrorDiag": "",
[2025-10-12 10:59:49]  *** Listing of results directory ***
[2025-10-12 10:59:49] total 417864
[2025-10-12 10:59:49] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 04:37 pilot3.tar.gz
[2025-10-12 10:59:49] -rwx------ 1 boincer umatlas     36292 Oct 12 04:38 runpilot2-wrapper.sh
[2025-10-12 10:59:49] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 04:38 queuedata.json
[2025-10-12 10:59:49] -rw-r--r-- 1 boincer umatlas       100 Oct 12 08:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 10:59:49] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 08:57 run_atlas
[2025-10-12 10:59:49] -rw-r--r-- 1 boincer umatlas       105 Oct 12 08:57 job.xml
[2025-10-12 10:59:49] -rw-r--r-- 2 boincer umatlas 221901291 Oct 12 08:57 EVNT.46676267._003542.pool.root.1
[2025-10-12 10:59:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 08:57 start_atlas.sh
[2025-10-12 10:59:49] drwxrwx--x 2 boincer umatlas      4096 Oct 12 08:57 shared
[2025-10-12 10:59:49] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 08:57 input.tar.gz
[2025-10-12 10:59:49] -rw-r--r-- 1 boincer umatlas         0 Oct 12 08:57 boinc_lockfile
[2025-10-12 10:59:49] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 08:57 pandaJob.out
[2025-10-12 10:59:49] -rw------- 1 boincer umatlas    975512 Oct 12 08:57 agis_schedconf.cvmfs.json
[2025-10-12 10:59:49] -rw------- 1 boincer umatlas   1560580 Oct 12 08:57 agis_ddmendpoints.agis.ALL.json
[2025-10-12 10:59:49] drwx------ 5 boincer umatlas      4096 Oct 12 08:57 pilot3
[2025-10-12 10:59:49] -rw-r--r-- 1 boincer umatlas      5910 Oct 12 10:57 init_data.xml
[2025-10-12 10:59:49] -rw------- 1 boincer umatlas 199286463 Oct 12 10:58 HITS.46676269._074520.pool.root.1
[2025-10-12 10:59:49] -rw-r--r-- 1 boincer umatlas       529 Oct 12 10:58 boinc_task_state.xml
[2025-10-12 10:59:49] -rw------- 1 boincer umatlas      1050 Oct 12 10:58 memory_monitor_summary.json
[2025-10-12 10:59:49] -rw------- 1 boincer umatlas    376515 Oct 12 10:59 log.46676269._074520.job.log.tgz.1
[2025-10-12 10:59:49] -rw------- 1 boincer umatlas      7840 Oct 12 10:59 heartbeat.json
[2025-10-12 10:59:49] -rw-r--r-- 1 boincer umatlas      8192 Oct 12 10:59 boinc_mmap_file
[2025-10-12 10:59:49] -rw-r--r-- 1 boincer umatlas        27 Oct 12 10:59 wrapper_checkpoint.txt
[2025-10-12 10:59:49] -rw------- 1 boincer umatlas        95 Oct 12 10:59 pilot_heartbeat.json
[2025-10-12 10:59:49] -rw------- 1 boincer umatlas      4746 Oct 12 10:59 pilotlog.txt
[2025-10-12 10:59:49] -rw------- 1 boincer umatlas   1026865 Oct 12 10:59 log.46676269._074520.job.log.1
[2025-10-12 10:59:49] -rw------- 1 boincer umatlas       357 Oct 12 10:59 output.list
[2025-10-12 10:59:49] -rw-r--r-- 1 boincer umatlas       620 Oct 12 10:59 runtime_log
[2025-10-12 10:59:49] -rw------- 1 boincer umatlas   1423360 Oct 12 10:59 result.tar.gz
[2025-10-12 10:59:49] -rw-r--r-- 1 boincer umatlas      8703 Oct 12 10:59 runtime_log.err
[2025-10-12 10:59:49] -rw------- 1 boincer umatlas       659 Oct 12 10:59 AFLNDmNm6R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm7BjNDmSo0cJm.diag
[2025-10-12 10:59:49] -rw-r--r-- 1 boincer umatlas     21207 Oct 12 10:59 stderr.txt
[2025-10-12 10:59:49] HITS file was successfully produced:
[2025-10-12 10:59:49] -rw------- 1 boincer umatlas 199286463 Oct 12 10:58 shared/HITS.pool.root.1
[2025-10-12 10:59:49]  *** Contents of shared directory: ***
[2025-10-12 10:59:49] total 413288
[2025-10-12 10:59:49] -rw-r--r-- 2 boincer umatlas 221901291 Oct 12 08:57 ATLAS.root_0
[2025-10-12 10:59:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 08:57 start_atlas.sh
[2025-10-12 10:59:49] -rw-r--r-- 2 boincer umatlas    569683 Oct 12 08:57 input.tar.gz
[2025-10-12 10:59:49] -rw------- 1 boincer umatlas 199286463 Oct 12 10:58 HITS.pool.root.1
[2025-10-12 10:59:49] -rw------- 1 boincer umatlas   1423360 Oct 12 10:59 result.tar.gz
10:59:51 (6705): run_atlas exited; CPU time 54485.240724
10:59:51 (6705): called boinc_finish(0)

</stderr_txt>
]]>

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