Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:30:42 (3886375): wrapper (7.7.26015): starting
19:30:42 (3886375): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 19:30:42] Arguments: --nthreads 4
[2025-10-13 19:30:42] Threads: 4
[2025-10-13 19:30:42] Checking for CVMFS
[2025-10-13 19:30:42] No cvmfs_config command found, will try listing directly
[2025-10-13 19:30:42] CVMFS is ok
[2025-10-13 19:30:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 19:30:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 19:30:42] Further information can be found at the LHC@home message board.
[2025-10-13 19:30:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 19:30:42] Checking for apptainer binary...
[2025-10-13 19:30:42] which: no apptainer in ((null))
[2025-10-13 19:30:42] apptainer is not installed, using version from CVMFS
[2025-10-13 19:30:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 19:30:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-10-13 19:30:42] apptainer works
[2025-10-13 19:30:42] Set ATHENA_PROC_NUMBER=4
[2025-10-13 19:30:42] Set ATHENA_CORE_NUMBER=4
[2025-10-13 19:30:42] Starting ATLAS job with PandaID=6839661193
[2025-10-13 19:30:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 22:36:51]  *** The last 200 lines of the pilot log: ***
[2025-10-13 22:36:51] 2025-10-13 20:03:15,755 | INFO     | PID=3896138 has CPU usage=16.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 22:36:51] 2025-10-13 20:03:15,755 | INFO     | .. there are 8 such processes running
[2025-10-13 22:36:51] 2025-10-13 20:03:15,865 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 22:36:51] 2025-10-13 20:03:15,886 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2684.273132812501
[2025-10-13 22:36:51] 2025-10-13 20:03:15,911 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6839661193/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 22:36:51] 2025-10-13 20:03:15,912 | INFO     | extracted standard info from prmon json
[2025-10-13 22:36:51] 2025-10-13 20:03:15,912 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 22:36:51] 2025-10-13 20:03:15,913 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 22:36:51] 2025-10-13 20:03:15,913 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 22:36:51] 2025-10-13 20:03:15,913 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 22:36:51] 2025-10-13 20:03:15,917 | INFO     | fitting pss+swap vs Time
[2025-10-13 22:36:51] 2025-10-13 20:03:15,917 | INFO     | sum of square deviations: 1025693650.0
[2025-10-13 22:36:51] 2025-10-13 20:03:15,918 | INFO     | sum of deviations: 9002401594.0
[2025-10-13 22:36:51] 2025-10-13 20:03:15,918 | INFO     | mean x: 1760381207.0
[2025-10-13 22:36:51] 2025-10-13 20:03:15,918 | INFO     | mean y: 2335508.0
[2025-10-13 22:36:51] 2025-10-13 20:03:15,918 | INFO     | -- intersect: -15448338856.55753
[2025-10-13 22:36:51] 2025-10-13 20:03:15,918 | INFO     | intersect: -15448338856.55753
[2025-10-13 22:36:51] 2025-10-13 20:03:15,918 | INFO     | chi2: 1.4205494953910915
[2025-10-13 22:36:51] 2025-10-13 20:03:15,919 | INFO     | sum of square deviations: 925859220.0
[2025-10-13 22:36:51] 2025-10-13 20:03:15,920 | INFO     | sum of deviations: 8913886354.5
[2025-10-13 22:36:51] 2025-10-13 20:03:15,920 | INFO     | mean x: 1760381054.5
[2025-10-13 22:36:51] 2025-10-13 20:03:15,920 | INFO     | mean y: 2335372.7430555555
[2025-10-13 22:36:51] 2025-10-13 20:03:15,920 | INFO     | -- intersect: -16946069224.262386
[2025-10-13 22:36:51] 2025-10-13 20:03:15,920 | INFO     | intersect: -16946069224.262386
[2025-10-13 22:36:51] 2025-10-13 20:03:15,920 | INFO     | chi2: 1.4221082414072883
[2025-10-13 22:36:51] 2025-10-13 20:03:15,920 | INFO     | current chi2=1.4221082414072883 (change=-0.10972838477321957 %)
[2025-10-13 22:36:51] 2025-10-13 20:03:15,920 | INFO     | right removable region: 143
[2025-10-13 22:36:51] 2025-10-13 20:03:15,921 | INFO     | sum of square deviations: 925859220.0
[2025-10-13 22:36:51] 2025-10-13 20:03:15,922 | INFO     | sum of deviations: -10349446995.499998
[2025-10-13 22:36:51] 2025-10-13 20:03:15,922 | INFO     | mean x: 1760381359.5
[2025-10-13 22:36:51] 2025-10-13 20:03:15,922 | INFO     | mean y: 2364568.840277778
[2025-10-13 22:36:51] 2025-10-13 20:03:15,922 | INFO     | -- intersect: 19680273670.411335
[2025-10-13 22:36:51] 2025-10-13 20:03:15,922 | INFO     | intersect: 19680273670.411335
[2025-10-13 22:36:51] 2025-10-13 20:03:15,922 | INFO     | chi2: 0.05026600927046186
[2025-10-13 22:36:51] 2025-10-13 20:03:15,922 | INFO     | current chi2=0.05026600927046186 (change=96.46150947689274 %)
[2025-10-13 22:36:51] 2025-10-13 20:03:15,923 | INFO     | sum of square deviations: 832722590.0
[2025-10-13 22:36:51] 2025-10-13 20:03:15,924 | INFO     | sum of deviations: -10340085844.0
[2025-10-13 22:36:51] 2025-10-13 20:03:15,924 | INFO     | mean x: 1760381512.0
[2025-10-13 22:36:51] 2025-10-13 20:03:15,924 | INFO     | mean y: 2364546.35971223
[2025-10-13 22:36:51] 2025-10-13 20:03:15,924 | INFO     | -- intersect: 21861379986.62838
[2025-10-13 22:36:51] 2025-10-13 20:03:15,924 | INFO     | intersect: 21861379986.62838
[2025-10-13 22:36:51] 2025-10-13 20:03:15,924 | INFO     | chi2: 0.0478378024726866
[2025-10-13 22:36:51] 2025-10-13 20:03:15,924 | INFO     | current chi2=0.0478378024726866 (change=4.830713305108484 %)
[2025-10-13 22:36:51] 2025-10-13 20:03:15,924 | INFO     | left removable region: 20
[2025-10-13 22:36:51] 2025-10-13 20:03:15,925 | INFO     | sum of square deviations: 576985702.0
[2025-10-13 22:36:51] 2025-10-13 20:03:15,925 | INFO     | sum of deviations: -8191159422.000001
[2025-10-13 22:36:51] 2025-10-13 20:03:15,925 | INFO     | mean x: 1760381634.0
[2025-10-13 22:36:51] 2025-10-13 20:03:15,925 | INFO     | mean y: 2362591.8536585364
[2025-10-13 22:36:51] 2025-10-13 20:03:15,926 | INFO     | -- intersect: 24993565246.741726
[2025-10-13 22:36:51] 2025-10-13 20:03:15,926 | INFO     | intersect: 24993565246.741726
[2025-10-13 22:36:51] 2025-10-13 20:03:15,926 | INFO     | chi2: 0.0457157158646714
[2025-10-13 22:36:51] 2025-10-13 20:03:15,926 | INFO     | -- intersect: 24993565246.741726
[2025-10-13 22:36:51] 2025-10-13 20:03:15,926 | INFO     | current memory leak: -14.20 B/s (using 123 data points, chi2=0.05)
[2025-10-13 22:36:51] 2025-10-13 20:03:15,926 | INFO     | could have reported an average CPU frequency of 2707 MHz (9 samples)
[2025-10-13 22:36:51] 2025-10-13 20:03:15,927 | INFO     | ..............................
[2025-10-13 22:36:51] 2025-10-13 20:03:15,927 | INFO     | . Timing measurements:
[2025-10-13 22:36:51] 2025-10-13 20:03:15,927 | INFO     | . get job = 0 s
[2025-10-13 22:36:51] 2025-10-13 20:03:15,927 | INFO     | . initial setup = 1 s
[2025-10-13 22:36:51] 2025-10-13 20:03:15,927 | INFO     | . payload setup = 9 s
[2025-10-13 22:36:51] 2025-10-13 20:03:15,927 | INFO     | . stage-in = 0 s
[2025-10-13 22:36:51] 2025-10-13 20:03:15,927 | INFO     | . payload execution = 9095 s
[2025-10-13 22:36:51] 2025-10-13 20:03:15,927 | INFO     | . stage-out = 0 s
[2025-10-13 22:36:51] 2025-10-13 20:03:15,927 | INFO     | . log creation = 0 s
[2025-10-13 22:36:51] 2025-10-13 20:03:15,927 | INFO     | ..............................
[2025-10-13 22:36:51] 2025-10-13 20:03:16,029 | INFO     | 
[2025-10-13 22:36:51] 2025-10-13 20:03:16,030 | INFO     | job summary report
[2025-10-13 22:36:51] 2025-10-13 20:03:16,030 | INFO     | --------------------------------------------------
[2025-10-13 22:36:51] 2025-10-13 20:03:16,030 | INFO     | PanDA job id: 6839661193
[2025-10-13 22:36:51] 2025-10-13 20:03:16,030 | INFO     | task id: 46676269
[2025-10-13 22:36:51] 2025-10-13 20:03:16,030 | INFO     | errors: (none)
[2025-10-13 22:36:51] 2025-10-13 20:03:16,030 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 22:36:51] 2025-10-13 20:03:16,030 | INFO     | pilot state: finished 
[2025-10-13 22:36:51] 2025-10-13 20:03:16,030 | INFO     | transexitcode: 0
[2025-10-13 22:36:51] 2025-10-13 20:03:16,030 | INFO     | exeerrorcode: 0
[2025-10-13 22:36:51] 2025-10-13 20:03:16,031 | INFO     | exeerrordiag: 
[2025-10-13 22:36:51] 2025-10-13 20:03:16,031 | INFO     | exitcode: 0
[2025-10-13 22:36:51] 2025-10-13 20:03:16,031 | INFO     | exitmsg: OK
[2025-10-13 22:36:51] 2025-10-13 20:03:16,031 | INFO     | cpuconsumptiontime: 34737 s
[2025-10-13 22:36:51] 2025-10-13 20:03:16,031 | INFO     | nevents: 400
[2025-10-13 22:36:51] 2025-10-13 20:03:16,031 | INFO     | neventsw: 0
[2025-10-13 22:36:51] 2025-10-13 20:03:16,031 | INFO     | pid: 3919144
[2025-10-13 22:36:51] 2025-10-13 20:03:16,031 | INFO     | pgrp: 3919144
[2025-10-13 22:36:51] 2025-10-13 20:03:16,031 | INFO     | corecount: 4
[2025-10-13 22:36:51] 2025-10-13 20:03:16,031 | INFO     | event service: False
[2025-10-13 22:36:51] 2025-10-13 20:03:16,032 | INFO     | sizes: {0: 2348869, 7: 2349131, 11: 2349159, 9107: 2377744, 9108: 2377743, 9109: 2386821, 9111: 2387005, 9119: 2387263}
[2025-10-13 22:36:51] 2025-10-13 20:03:16,032 | INFO     | --------------------------------------------------
[2025-10-13 22:36:51] 2025-10-13 20:03:16,032 | INFO     | 
[2025-10-13 22:36:51] 2025-10-13 20:03:16,032 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-10-13 22:36:51] 2025-10-13 20:03:16,066 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 22:36:51] 2025-10-13 20:03:16,066 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 22:36:51] 2025-10-13 20:03:16,066 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 22:36:51] 2025-10-13 20:03:16,066 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 22:36:51] 2025-10-13 20:03:16,066 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 22:36:51] 2025-10-13 20:03:16,066 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 22:36:51] 2025-10-13 20:03:16,067 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 22:36:51] 2025-10-13 20:03:16,067 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 22:36:51] 2025-10-13 20:03:16,067 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 22:36:51] 2025-10-13 20:03:16,067 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 22:36:51] 2025-10-13 20:03:16,067 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 22:36:51] 2025-10-13 20:03:16,067 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 22:36:51] 2025-10-13 20:03:16,067 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 22:36:51] 2025-10-13 20:03:16,067 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 22:36:51] 2025-10-13 20:03:16,067 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 22:36:51] 2025-10-13 20:03:16,067 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 22:36:51] 2025-10-13 20:03:16,067 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 22:36:51] 2025-10-13 20:03:16,068 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 22:36:51] 2025-10-13 20:03:16,068 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 22:36:51] 2025-10-13 20:03:16,068 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 22:36:51] 2025-10-13 20:03:16,068 | INFO     | job 6839661193 has completed (purged errors)
[2025-10-13 22:36:51] 2025-10-13 20:03:16,068 | INFO     | overall cleanup function is called
[2025-10-13 22:36:51] 2025-10-13 20:03:17,077 | INFO     | --- collectZombieJob: --- 10, [3919144]
[2025-10-13 22:36:51] 2025-10-13 20:03:17,077 | INFO     | zombie collector waiting for pid 3919144
[2025-10-13 22:36:51] 2025-10-13 20:03:17,078 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 22:36:51] 2025-10-13 20:03:17,078 | INFO     | collected zombie processes
[2025-10-13 22:36:51] 2025-10-13 20:03:17,078 | INFO     | will attempt to kill all subprocesses of pid=3919144
[2025-10-13 22:36:51] 2025-10-13 20:03:17,813 | INFO     | process IDs to be killed: [3919144] (in reverse order)
[2025-10-13 22:36:51] 2025-10-13 20:03:18,066 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 22:36:51] 2025-10-13 20:03:18,066 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 22:36:51] 2025-10-13 20:03:18,099 | INFO     | did not find any defunct processes belonging to 3919144
[2025-10-13 22:36:51] 2025-10-13 20:03:18,128 | INFO     | did not find any defunct processes belonging to 3919144
[2025-10-13 22:36:51] 2025-10-13 20:03:18,129 | INFO     | ready for new job
[2025-10-13 22:36:51] 2025-10-13 20:03:18,129 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 22:36:51] 2025-10-13 20:03:18,132 | INFO     | ***************************************
[2025-10-13 22:36:51] 2025-10-13 20:03:18,132 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 22:36:51] 2025-10-13 20:03:18,132 | INFO     | ***************************************
[2025-10-13 22:36:51] 2025-10-13 20:03:18,132 | INFO     | 
[2025-10-13 22:36:51] 2025-10-13 20:03:18,141 | INFO     | architecture information:
[2025-10-13 22:36:51] 2025-10-13 20:03:18,141 | INFO     | executing command: cat /etc/os-release
[2025-10-13 22:36:51] 2025-10-13 20:03:18,167 | INFO     | cat /etc/os-release:
[2025-10-13 22:36:51] NAME="CentOS Linux"
[2025-10-13 22:36:51] VERSION="7 (Core)"
[2025-10-13 22:36:51] ID="centos"
[2025-10-13 22:36:51] ID_LIKE="rhel fedora"
[2025-10-13 22:36:51] VERSION_ID="7"
[2025-10-13 22:36:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 22:36:51] ANSI_COLOR="0;31"
[2025-10-13 22:36:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 22:36:51] HOME_URL="https://www.centos.org/"
[2025-10-13 22:36:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 22:36:51] 
[2025-10-13 22:36:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 22:36:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 22:36:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 22:36:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 22:36:51] 
[2025-10-13 22:36:51] 2025-10-13 20:03:18,168 | INFO     | ***************************************
[2025-10-13 22:36:51] 2025-10-13 20:03:18,671 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-10-13 22:36:51] 2025-10-13 20:03:18,696 | INFO     | sufficient remaining disk space (3330428370944 B)
[2025-10-13 22:36:51] 2025-10-13 20:03:18,696 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 22:36:51] 2025-10-13 20:03:18,696 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 22:36:51] 2025-10-13 20:03:18,697 | INFO     | update_server=False
[2025-10-13 22:36:51] 2025-10-13 20:03:18,697 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 22:36:51] 2025-10-13 20:03:18,697 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 22:36:51] 2025-10-13 20:03:18,697 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 22:36:51] 2025-10-13 20:03:18,698 | INFO     | aborting loop
[2025-10-13 22:36:51] 2025-10-13 20:03:18,698 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 22:36:51] 2025-10-13 20:03:18,852 | INFO     | all payload control threads have been joined
[2025-10-13 22:36:51] 2025-10-13 20:03:19,058 | INFO     | all data control threads have been joined
[2025-10-13 22:36:51] 2025-10-13 20:03:19,701 | INFO     | [job] retrieve thread has finished
[2025-10-13 22:36:51] 2025-10-13 20:03:19,703 | INFO     | [job] job monitor thread has finished
[2025-10-13 22:36:51] 2025-10-13 20:03:19,757 | INFO     | all job control threads have been joined
[2025-10-13 22:36:51] 2025-10-13 20:03:19,785 | INFO     | [payload] validate_post thread has finished
[2025-10-13 22:36:51] 2025-10-13 20:03:19,857 | INFO     | [payload] control thread has finished
[2025-10-13 22:36:51] 2025-10-13 20:03:20,063 | INFO     | [data] control thread has finished
[2025-10-13 22:36:51] 2025-10-13 20:03:20,300 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 22:36:51] 2025-10-13 20:03:20,301 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 22:36:51] 2025-10-13 20:03:20,357 | INFO     | [payload] failed_post thread has finished
[2025-10-13 22:36:51] 2025-10-13 20:03:20,703 | INFO     | [data] copytool_out thread has finished
[2025-10-13 22:36:51] 2025-10-13 20:03:20,762 | INFO     | [job] control thread has finished
[2025-10-13 22:36:51] 2025-10-13 20:03:20,879 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 22:36:51] 2025-10-13 20:03:20,892 | INFO     | [job] validate thread has finished
[2025-10-13 22:36:51] 2025-10-13 20:03:21,040 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 22:36:51] 2025-10-13 20:03:21,050 | INFO     | [data] copytool_in thread has finished
[2025-10-13 22:36:51] 2025-10-13 20:03:22,045 | INFO     | [job] queue monitor thread has finished
[2025-10-13 22:36:51] 2025-10-13 20:03:22,706 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 22:36:51] 2025-10-13 20:03:29,047 | INFO     | job.realtimelogging is not enabled
[2025-10-13 22:36:51] 2025-10-13 20:03:30,053 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 22:36:51] 2025-10-13 20:03:48,802 | INFO     | PID=3896138 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 22:36:51] 2025-10-13 20:03:48,802 | INFO     | .. there are 8 such processes running
[2025-10-13 22:36:51] 2025-10-13 20:03:48,803 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 22:36:51] 2025-10-13 20:03:48,803 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 22:36:51] 2025-10-13 20:03:48,803 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 22:36:51] 2025-10-13 20:04:12,305 | INFO     | [monitor] cgroup control has ended
[2025-10-13 22:36:51] 2025-10-13 20:04:12,855 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22747133310784)>', '<ExcThread(monitor, started 22746893350656)>']
[2025-10-13 22:36:51] 2025-10-13 20:04:12,923 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 22:36:51] 2025-10-13 20:04:12,923 | INFO     | [monitor] control thread has ended
[2025-10-13 22:36:51] 2025-10-13 20:04:17,880 | INFO     | all workflow threads have been joined
[2025-10-13 22:36:51] 2025-10-13 20:04:17,880 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 22:36:51] 2025-10-13 20:04:17,881 | INFO     | traces error code: 0
[2025-10-13 22:36:51] 2025-10-13 20:04:17,881 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 22:36:51] 2025-10-13 20:04:18,041 [wrapper] ==== pilot stdout END ====
[2025-10-13 22:36:51] 2025-10-13 20:04:18,045 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 22:36:51] 2025-10-13 20:04:18,050 [wrapper] pilotpid: 3896138
[2025-10-13 22:36:51] 2025-10-13 20:04:18,053 [wrapper] Pilot exit status: 0
[2025-10-13 22:36:51] 2025-10-13 20:04:18,069 [wrapper] pandaids: 6839661193
[2025-10-13 22:36:51] 2025-10-13 20:04:18,244 [wrapper] cleanup supervisor_pilot  144668 3896139
[2025-10-13 22:36:51] 2025-10-13 20:04:18,248 [wrapper] Test setup, not cleaning
[2025-10-13 22:36:51] 2025-10-13 20:04:18,252 [wrapper] apfmon messages muted
[2025-10-13 22:36:51] 2025-10-13 20:04:18,256 [wrapper] ==== wrapper stdout END ====
[2025-10-13 22:36:51] 2025-10-13 20:04:18,259 [wrapper] ==== wrapper stderr END ====
[2025-10-13 22:36:51]  *** Error codes and diagnostics ***
[2025-10-13 22:36:51]     "exeErrorCode": 0,
[2025-10-13 22:36:51]     "exeErrorDiag": "",
[2025-10-13 22:36:51]     "pilotErrorCode": 0,
[2025-10-13 22:36:51]     "pilotErrorDiag": "",
[2025-10-13 22:36:51]  *** Listing of results directory ***
[2025-10-13 22:36:51] total 406396
[2025-10-13 22:36:51] -rw-r--r-- 1 boinc boinc    557409 Oct 12 09:58 pilot3.tar.gz
[2025-10-13 22:36:51] -rwx------ 1 boinc boinc     36292 Oct 12 10:35 runpilot2-wrapper.sh
[2025-10-13 22:36:51] -rw-r--r-- 1 boinc boinc      5112 Oct 12 10:35 queuedata.json
[2025-10-13 22:36:51] -rw-r--r-- 1 boinc boinc       100 Oct 13 19:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 22:36:51] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 19:30 run_atlas
[2025-10-13 22:36:51] -rw-r--r-- 1 boinc boinc       105 Oct 13 19:30 job.xml
[2025-10-13 22:36:51] -rw-r--r-- 2 boinc boinc 218846790 Oct 13 19:30 EVNT.46676267._003535.pool.root.1
[2025-10-13 22:36:51] -rw-r--r-- 1 boinc boinc      6688 Oct 13 19:30 init_data.xml
[2025-10-13 22:36:51] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:30 start_atlas.sh
[2025-10-13 22:36:51] drwxrwx--x 2 boinc boinc      4096 Oct 13 19:30 shared
[2025-10-13 22:36:51] -rw-r--r-- 2 boinc boinc    569672 Oct 13 19:30 input.tar.gz
[2025-10-13 22:36:51] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:30 boinc_lockfile
[2025-10-13 22:36:51] -rw-r--r-- 1 boinc boinc      2550 Oct 13 19:30 pandaJob.out
[2025-10-13 22:36:51] -rw------- 1 boinc boinc    972791 Oct 13 19:30 agis_schedconf.cvmfs.json
[2025-10-13 22:36:51] -rw------- 1 boinc boinc   1560580 Oct 13 19:30 agis_ddmendpoints.agis.ALL.json
[2025-10-13 22:36:51] drwx------ 5 boinc boinc      4096 Oct 13 19:30 pilot3
[2025-10-13 22:36:51] -rw------- 1 boinc boinc 190162055 Oct 13 22:02 HITS.46676269._074307.pool.root.1
[2025-10-13 22:36:51] -rw------- 1 boinc boinc      1027 Oct 13 22:03 memory_monitor_summary.json
[2025-10-13 22:36:51] -rw-r--r-- 1 boinc boinc       528 Oct 13 22:03 boinc_task_state.xml
[2025-10-13 22:36:51] -rw------- 1 boinc boinc    339939 Oct 13 22:03 log.46676269._074307.job.log.tgz.1
[2025-10-13 22:36:51] -rw------- 1 boinc boinc      7784 Oct 13 22:03 heartbeat.json
[2025-10-13 22:36:51] -rw------- 1 boinc boinc        95 Oct 13 22:03 pilot_heartbeat.json
[2025-10-13 22:36:51] -rw------- 1 boinc boinc      4907 Oct 13 22:04 pilotlog.txt
[2025-10-13 22:36:51] -rw------- 1 boinc boinc   1283648 Oct 13 22:04 log.46676269._074307.job.log.1
[2025-10-13 22:36:51] -rw------- 1 boinc boinc       357 Oct 13 22:04 output.list
[2025-10-13 22:36:51] -rw-r--r-- 1 boinc boinc       620 Oct 13 22:04 runtime_log
[2025-10-13 22:36:51] -rw------- 1 boinc boinc   1638400 Oct 13 22:04 result.tar.gz
[2025-10-13 22:36:51] -rw------- 1 boinc boinc       663 Oct 13 22:04 8zjLDmxi6R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmU9iNDmZQUZ7m.diag
[2025-10-13 22:36:51] -rw-r--r-- 1 boinc boinc      9084 Oct 13 22:04 runtime_log.err
[2025-10-13 22:36:51] -rw-r--r-- 1 boinc boinc        26 Oct 13 22:36 wrapper_checkpoint.txt
[2025-10-13 22:36:51] -rw-r--r-- 1 boinc boinc      8192 Oct 13 22:36 boinc_mmap_file
[2025-10-13 22:36:51] -rw-r--r-- 1 boinc boinc     20951 Oct 13 22:36 stderr.txt
[2025-10-13 22:36:51] HITS file was successfully produced:
[2025-10-13 22:36:51] -rw------- 1 boinc boinc 190162055 Oct 13 22:02 shared/HITS.pool.root.1
[2025-10-13 22:36:51]  *** Contents of shared directory: ***
[2025-10-13 22:36:51] total 401608
[2025-10-13 22:36:51] -rw-r--r-- 2 boinc boinc 218846790 Oct 13 19:30 ATLAS.root_0
[2025-10-13 22:36:51] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:30 start_atlas.sh
[2025-10-13 22:36:51] -rw-r--r-- 2 boinc boinc    569672 Oct 13 19:30 input.tar.gz
[2025-10-13 22:36:51] -rw------- 1 boinc boinc 190162055 Oct 13 22:02 HITS.pool.root.1
[2025-10-13 22:36:51] -rw------- 1 boinc boinc   1638400 Oct 13 22:04 result.tar.gz
22:36:52 (3886375): run_atlas exited; CPU time 35325.237353
22:36:52 (3886375): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN