Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:01:27 (3625915): wrapper (7.7.26015): starting
13:01:27 (3625915): wrapper: running run_atlas (--nthreads 11)
[2025-10-12 13:01:27] Arguments: --nthreads 11
[2025-10-12 13:01:27] Threads: 11
[2025-10-12 13:01:27] Checking for CVMFS
[2025-10-12 13:01:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:01:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:01:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:01:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:01:48] 2.13.2.0 2408171 129519 256324 151627 3 84 28373675 32935937 18959 16776704 0 189924074 99.603 207277943 30484 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-12 13:01:48] CVMFS is ok
[2025-10-12 13:01:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 13:01:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 13:01:48] Further information can be found at the LHC@home message board.
[2025-10-12 13:01:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:01:48] Checking for apptainer binary...
[2025-10-12 13:01:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 13:01:48] Running /usr/bin/apptainer --version
[2025-10-12 13:01:48] apptainer version 1.4.3-1.el9
[2025-10-12 13:01:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:01:49] c6-5-7-3.aglt2.org
[2025-10-12 13:01:49] apptainer works
[2025-10-12 13:01:49] Set ATHENA_PROC_NUMBER=11
[2025-10-12 13:01:49] Set ATHENA_CORE_NUMBER=11
[2025-10-12 13:01:49] Starting ATLAS job with PandaID=6839774834
[2025-10-12 13:01:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 16:19:15]  *** The last 200 lines of the pilot log: ***
[2025-10-12 16:19:15] 2025-10-12 20:18:08,049 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 16:19:15] 2025-10-12 20:18:08,049 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 16:19:15] 2025-10-12 20:18:08,052 | INFO     | fitting pss+swap vs Time
[2025-10-12 16:19:15] 2025-10-12 20:18:08,052 | INFO     | sum of square deviations: 2127246904.1526299
[2025-10-12 16:19:15] 2025-10-12 20:18:08,053 | INFO     | sum of deviations: 29851300956.752625
[2025-10-12 16:19:15] 2025-10-12 20:18:08,053 | INFO     | mean x: 1760294454.2157896
[2025-10-12 16:19:15] 2025-10-12 20:18:08,053 | INFO     | mean y: 2259225.6157894735
[2025-10-12 16:19:15] 2025-10-12 20:18:08,053 | INFO     | -- intersect: -24699659213.05732
[2025-10-12 16:19:15] 2025-10-12 20:18:08,053 | INFO     | intersect: -24699659213.05732
[2025-10-12 16:19:15] 2025-10-12 20:18:08,054 | INFO     | chi2: 2.6109567323850267
[2025-10-12 16:19:15] 2025-10-12 20:18:08,054 | INFO     | sum of square deviations: 1963725207.383789
[2025-10-12 16:19:15] 2025-10-12 20:18:08,055 | INFO     | sum of deviations: 41500809381.800026
[2025-10-12 16:19:15] 2025-10-12 20:18:08,055 | INFO     | mean x: 1760294301.7189188
[2025-10-12 16:19:15] 2025-10-12 20:18:08,055 | INFO     | mean y: 2269866.4
[2025-10-12 16:19:15] 2025-10-12 20:18:08,055 | INFO     | -- intersect: -37199288679.98784
[2025-10-12 16:19:15] 2025-10-12 20:18:08,055 | INFO     | intersect: -37199288679.98784
[2025-10-12 16:19:15] 2025-10-12 20:18:08,055 | INFO     | chi2: 1.8328031997208092
[2025-10-12 16:19:15] 2025-10-12 20:18:08,055 | INFO     | current chi2=1.8328031997208092 (change=29.80338674373201 %)
[2025-10-12 16:19:15] 2025-10-12 20:18:08,056 | INFO     | sum of square deviations: 1808728094.950002
[2025-10-12 16:19:15] 2025-10-12 20:18:08,057 | INFO     | sum of deviations: 39711498836.76666
[2025-10-12 16:19:15] 2025-10-12 20:18:08,057 | INFO     | mean x: 1760294149.1833334
[2025-10-12 16:19:15] 2025-10-12 20:18:08,057 | INFO     | mean y: 2268106.188888889
[2025-10-12 16:19:15] 2025-10-12 20:18:08,057 | INFO     | -- intersect: -38645840060.44709
[2025-10-12 16:19:15] 2025-10-12 20:18:08,057 | INFO     | intersect: -38645840060.44709
[2025-10-12 16:19:15] 2025-10-12 20:18:08,057 | INFO     | chi2: 1.8339135324422686
[2025-10-12 16:19:15] 2025-10-12 20:18:08,057 | INFO     | current chi2=1.8339135324422686 (change=-0.06058112085512379 %)
[2025-10-12 16:19:15] 2025-10-12 20:18:08,057 | INFO     | right removable region: 179
[2025-10-12 16:19:15] 2025-10-12 20:18:08,058 | INFO     | sum of square deviations: 1963676774.0216293
[2025-10-12 16:19:15] 2025-10-12 20:18:08,058 | INFO     | sum of deviations: -2967186231.5999994
[2025-10-12 16:19:15] 2025-10-12 20:18:08,058 | INFO     | mean x: 1760294606.735135
[2025-10-12 16:19:15] 2025-10-12 20:18:08,059 | INFO     | mean y: 2289604.6
[2025-10-12 16:19:15] 2025-10-12 20:18:08,059 | INFO     | -- intersect: 2662158066.540008
[2025-10-12 16:19:15] 2025-10-12 20:18:08,059 | INFO     | intersect: 2662158066.540008
[2025-10-12 16:19:15] 2025-10-12 20:18:08,059 | INFO     | chi2: 0.9629259170837846
[2025-10-12 16:19:15] 2025-10-12 20:18:08,059 | INFO     | current chi2=0.9629259170837846 (change=63.119805658204754 %)
[2025-10-12 16:19:15] 2025-10-12 20:18:08,059 | INFO     | sum of square deviations: 1808711456.2444415
[2025-10-12 16:19:15] 2025-10-12 20:18:08,060 | INFO     | sum of deviations: -3885682015.544446
[2025-10-12 16:19:15] 2025-10-12 20:18:08,060 | INFO     | mean x: 1760294759.2555556
[2025-10-12 16:19:15] 2025-10-12 20:18:08,060 | INFO     | mean y: 2290397.7944444446
[2025-10-12 16:19:15] 2025-10-12 20:18:08,060 | INFO     | -- intersect: 3783958095.2494755
[2025-10-12 16:19:15] 2025-10-12 20:18:08,060 | INFO     | intersect: 3783958095.2494755
[2025-10-12 16:19:15] 2025-10-12 20:18:08,061 | INFO     | chi2: 0.8846398040484925
[2025-10-12 16:19:15] 2025-10-12 20:18:08,061 | INFO     | current chi2=0.8846398040484925 (change=8.130024506182274 %)
[2025-10-12 16:19:15] 2025-10-12 20:18:08,061 | INFO     | left removable region: 20
[2025-10-12 16:19:15] 2025-10-12 20:18:08,061 | INFO     | sum of square deviations: 1246612104.4276667
[2025-10-12 16:19:15] 2025-10-12 20:18:08,062 | INFO     | sum of deviations: 7446400937.213838
[2025-10-12 16:19:15] 2025-10-12 20:18:08,062 | INFO     | mean x: 1760294728.7421384
[2025-10-12 16:19:15] 2025-10-12 20:18:08,062 | INFO     | mean y: 2300943.371069182
[2025-10-12 16:19:15] 2025-10-12 20:18:08,062 | INFO     | -- intersect: -10512485710.249626
[2025-10-12 16:19:15] 2025-10-12 20:18:08,062 | INFO     | intersect: -10512485710.249626
[2025-10-12 16:19:15] 2025-10-12 20:18:08,062 | INFO     | chi2: 0.03741584113254946
[2025-10-12 16:19:15] 2025-10-12 20:18:08,062 | INFO     | -- intersect: -10512485710.249626
[2025-10-12 16:19:15] 2025-10-12 20:18:08,062 | INFO     | current memory leak: 5.97 B/s (using 159 data points, chi2=0.04)
[2025-10-12 16:19:15] 2025-10-12 20:18:08,063 | INFO     | could have reported an average CPU frequency of 2696 MHz (10 samples)
[2025-10-12 16:19:15] 2025-10-12 20:18:08,063 | INFO     | ..............................
[2025-10-12 16:19:15] 2025-10-12 20:18:08,063 | INFO     | . Timing measurements:
[2025-10-12 16:19:15] 2025-10-12 20:18:08,063 | INFO     | . get job = 0 s
[2025-10-12 16:19:15] 2025-10-12 20:18:08,063 | INFO     | . initial setup = 5 s
[2025-10-12 16:19:15] 2025-10-12 20:18:08,063 | INFO     | . payload setup = 32 s
[2025-10-12 16:19:15] 2025-10-12 20:18:08,063 | INFO     | . stage-in = 0 s
[2025-10-12 16:19:15] 2025-10-12 20:18:08,063 | INFO     | . payload execution = 11581 s
[2025-10-12 16:19:15] 2025-10-12 20:18:08,063 | INFO     | . stage-out = 3 s
[2025-10-12 16:19:15] 2025-10-12 20:18:08,063 | INFO     | . log creation = 0 s
[2025-10-12 16:19:15] 2025-10-12 20:18:08,063 | INFO     | ..............................
[2025-10-12 16:19:15] 2025-10-12 20:18:08,672 | INFO     | 
[2025-10-12 16:19:15] 2025-10-12 20:18:08,672 | INFO     | job summary report
[2025-10-12 16:19:15] 2025-10-12 20:18:08,673 | INFO     | --------------------------------------------------
[2025-10-12 16:19:15] 2025-10-12 20:18:08,673 | INFO     | PanDA job id: 6839774834
[2025-10-12 16:19:15] 2025-10-12 20:18:08,673 | INFO     | task id: 46676269
[2025-10-12 16:19:15] 2025-10-12 20:18:08,673 | INFO     | errors: (none)
[2025-10-12 16:19:15] 2025-10-12 20:18:08,673 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 16:19:15] 2025-10-12 20:18:08,673 | INFO     | pilot state: finished 
[2025-10-12 16:19:15] 2025-10-12 20:18:08,673 | INFO     | transexitcode: 0
[2025-10-12 16:19:15] 2025-10-12 20:18:08,673 | INFO     | exeerrorcode: 0
[2025-10-12 16:19:15] 2025-10-12 20:18:08,673 | INFO     | exeerrordiag: 
[2025-10-12 16:19:15] 2025-10-12 20:18:08,673 | INFO     | exitcode: 0
[2025-10-12 16:19:15] 2025-10-12 20:18:08,673 | INFO     | exitmsg: OK
[2025-10-12 16:19:15] 2025-10-12 20:18:08,673 | INFO     | cpuconsumptiontime: 43141 s
[2025-10-12 16:19:15] 2025-10-12 20:18:08,674 | INFO     | nevents: 400
[2025-10-12 16:19:15] 2025-10-12 20:18:08,674 | INFO     | neventsw: 0
[2025-10-12 16:19:15] 2025-10-12 20:18:08,674 | INFO     | pid: 3650722
[2025-10-12 16:19:15] 2025-10-12 20:18:08,674 | INFO     | pgrp: 3650722
[2025-10-12 16:19:15] 2025-10-12 20:18:08,674 | INFO     | corecount: 11
[2025-10-12 16:19:15] 2025-10-12 20:18:08,674 | INFO     | event service: False
[2025-10-12 16:19:15] 2025-10-12 20:18:08,674 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 12: 2348913, 24: 2348941, 27: 2349231, 35: 2349387, 11617: 2378619, 11621: 2387617, 11624: 2387673, 11656: 2387867}
[2025-10-12 16:19:15] 2025-10-12 20:18:08,674 | INFO     | --------------------------------------------------
[2025-10-12 16:19:15] 2025-10-12 20:18:08,674 | INFO     | 
[2025-10-12 16:19:15] 2025-10-12 20:18:08,674 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-12 16:19:15] 2025-10-12 20:18:08,952 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 16:19:15] 2025-10-12 20:18:08,953 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 16:19:15] 2025-10-12 20:18:08,953 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 16:19:15] 2025-10-12 20:18:08,953 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 16:19:15] 2025-10-12 20:18:08,953 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 16:19:15] 2025-10-12 20:18:08,953 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 16:19:15] 2025-10-12 20:18:08,953 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 16:19:15] 2025-10-12 20:18:08,953 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 16:19:15] 2025-10-12 20:18:08,953 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 16:19:15] 2025-10-12 20:18:08,953 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 16:19:15] 2025-10-12 20:18:08,954 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 16:19:15] 2025-10-12 20:18:08,954 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 16:19:15] 2025-10-12 20:18:08,954 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 16:19:15] 2025-10-12 20:18:08,954 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 16:19:15] 2025-10-12 20:18:08,954 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 16:19:15] 2025-10-12 20:18:08,954 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 16:19:15] 2025-10-12 20:18:08,954 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 16:19:15] 2025-10-12 20:18:08,954 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 16:19:15] 2025-10-12 20:18:08,954 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 16:19:15] 2025-10-12 20:18:08,954 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 16:19:15] 2025-10-12 20:18:08,954 | INFO     | job 6839774834 has completed (purged errors)
[2025-10-12 16:19:15] 2025-10-12 20:18:08,955 | INFO     | overall cleanup function is called
[2025-10-12 16:19:15] 2025-10-12 20:18:10,006 | INFO     | --- collectZombieJob: --- 10, [3650722]
[2025-10-12 16:19:15] 2025-10-12 20:18:10,006 | INFO     | zombie collector waiting for pid 3650722
[2025-10-12 16:19:15] 2025-10-12 20:18:10,007 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 16:19:15] 2025-10-12 20:18:10,007 | INFO     | collected zombie processes
[2025-10-12 16:19:15] 2025-10-12 20:18:10,007 | INFO     | will attempt to kill all subprocesses of pid=3650722
[2025-10-12 16:19:15] 2025-10-12 20:18:10,682 | INFO     | process IDs to be killed: [3650722] (in reverse order)
[2025-10-12 16:19:15] 2025-10-12 20:18:10,852 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 16:19:15] 2025-10-12 20:18:10,853 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 16:19:15] 2025-10-12 20:18:10,870 | INFO     | did not find any defunct processes belonging to 3650722
[2025-10-12 16:19:15] 2025-10-12 20:18:10,881 | INFO     | did not find any defunct processes belonging to 3650722
[2025-10-12 16:19:15] 2025-10-12 20:18:10,882 | INFO     | ready for new job
[2025-10-12 16:19:15] 2025-10-12 20:18:10,882 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 16:19:15] 2025-10-12 20:18:10,884 | INFO     | ***************************************
[2025-10-12 16:19:15] 2025-10-12 20:18:10,884 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 16:19:15] 2025-10-12 20:18:10,884 | INFO     | ***************************************
[2025-10-12 16:19:15] 2025-10-12 20:18:10,884 | INFO     | 
[2025-10-12 16:19:15] 2025-10-12 20:18:10,901 | INFO     | architecture information:
[2025-10-12 16:19:15] 2025-10-12 20:18:10,904 | INFO     | executing command: cat /etc/os-release
[2025-10-12 16:19:15] 2025-10-12 20:18:10,965 | INFO     | cat /etc/os-release:
[2025-10-12 16:19:15] NAME="CentOS Linux"
[2025-10-12 16:19:15] VERSION="7 (Core)"
[2025-10-12 16:19:15] ID="centos"
[2025-10-12 16:19:15] ID_LIKE="rhel fedora"
[2025-10-12 16:19:15] VERSION_ID="7"
[2025-10-12 16:19:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 16:19:15] ANSI_COLOR="0;31"
[2025-10-12 16:19:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 16:19:15] HOME_URL="https://www.centos.org/"
[2025-10-12 16:19:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 16:19:15] 
[2025-10-12 16:19:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 16:19:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 16:19:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 16:19:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 16:19:15] 
[2025-10-12 16:19:15] 2025-10-12 20:18:10,965 | INFO     | ***************************************
[2025-10-12 16:19:15] 2025-10-12 20:18:11,469 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-12 16:19:15] 2025-10-12 20:18:11,622 | INFO     | sufficient remaining disk space (75211210752 B)
[2025-10-12 16:19:15] 2025-10-12 20:18:11,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 16:19:15] 2025-10-12 20:18:11,623 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 16:19:15] 2025-10-12 20:18:11,623 | INFO     | update_server=False
[2025-10-12 16:19:15] 2025-10-12 20:18:11,623 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 16:19:15] 2025-10-12 20:18:11,623 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:19:15] 2025-10-12 20:18:11,623 | INFO     | aborting loop
[2025-10-12 16:19:15] 2025-10-12 20:18:11,623 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 16:19:15] 2025-10-12 20:18:11,839 | INFO     | all payload control threads have been joined
[2025-10-12 16:19:15] 2025-10-12 20:18:12,276 | INFO     | all job control threads have been joined
[2025-10-12 16:19:15] 2025-10-12 20:18:12,442 | INFO     | all data control threads have been joined
[2025-10-12 16:19:15] 2025-10-12 20:18:12,629 | INFO     | [job] retrieve thread has finished
[2025-10-12 16:19:15] 2025-10-12 20:18:12,635 | INFO     | [job] job monitor thread has finished
[2025-10-12 16:19:15] 2025-10-12 20:18:12,845 | INFO     | [payload] control thread has finished
[2025-10-12 16:19:15] 2025-10-12 20:18:12,928 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 16:19:15] 2025-10-12 20:18:12,929 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 16:19:15] 2025-10-12 20:18:13,156 | INFO     | [payload] failed_post thread has finished
[2025-10-12 16:19:15] 2025-10-12 20:18:13,202 | INFO     | [payload] validate_post thread has finished
[2025-10-12 16:19:15] 2025-10-12 20:18:13,250 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 16:19:15] 2025-10-12 20:18:13,289 | INFO     | [job] control thread has finished
[2025-10-12 16:19:15] 2025-10-12 20:18:13,291 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 16:19:15] 2025-10-12 20:18:13,371 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 16:19:15] 2025-10-12 20:18:13,447 | INFO     | [data] control thread has finished
[2025-10-12 16:19:15] 2025-10-12 20:18:13,630 | INFO     | [data] copytool_out thread has finished
[2025-10-12 16:19:15] 2025-10-12 20:18:13,954 | INFO     | [job] validate thread has finished
[2025-10-12 16:19:15] 2025-10-12 20:18:14,105 | INFO     | [data] copytool_in thread has finished
[2025-10-12 16:19:15] 2025-10-12 20:18:14,256 | INFO     | [job] queue monitor thread has finished
[2025-10-12 16:19:15] 2025-10-12 20:18:17,302 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 16:19:15] 2025-10-12 20:18:22,263 | INFO     | job.realtimelogging is not enabled
[2025-10-12 16:19:15] 2025-10-12 20:18:23,277 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 16:19:15] 2025-10-12 20:18:42,317 | INFO     | PID=3638201 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 16:19:15] 2025-10-12 20:18:42,317 | INFO     | .. there are 23 such processes running
[2025-10-12 16:19:15] 2025-10-12 20:18:42,318 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 16:19:15] 2025-10-12 20:18:42,318 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 16:19:15] 2025-10-12 20:18:42,318 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 16:19:15] 2025-10-12 20:19:09,422 | INFO     | [monitor] cgroup control has ended
[2025-10-12 16:19:15] 2025-10-12 20:19:09,827 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140600912537408)>', '<ExcThread(monitor, started 140599965505280)>']
[2025-10-12 16:19:15] 2025-10-12 20:19:10,490 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 16:19:15] 2025-10-12 20:19:10,491 | INFO     | [monitor] control thread has ended
[2025-10-12 16:19:15] 2025-10-12 20:19:14,853 | INFO     | all workflow threads have been joined
[2025-10-12 16:19:15] 2025-10-12 20:19:14,854 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 16:19:15] 2025-10-12 20:19:14,854 | INFO     | traces error code: 0
[2025-10-12 16:19:15] 2025-10-12 20:19:14,854 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 16:19:15] 2025-10-12 20:19:15,263 [wrapper] ==== pilot stdout END ====
[2025-10-12 16:19:15] 2025-10-12 20:19:15,292 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 16:19:15] 2025-10-12 20:19:15,362 [wrapper] pilotpid: 3638201
[2025-10-12 16:19:15] 2025-10-12 20:19:15,376 [wrapper] Pilot exit status: 0
[2025-10-12 16:19:15] 2025-10-12 20:19:15,458 [wrapper] pandaids: 6839774834
[2025-10-12 16:19:15] 2025-10-12 20:19:15,597 [wrapper] cleanup supervisor_pilot 4077082 3638202
[2025-10-12 16:19:15] 2025-10-12 20:19:15,616 [wrapper] Test setup, not cleaning
[2025-10-12 16:19:15] 2025-10-12 20:19:15,646 [wrapper] apfmon messages muted
[2025-10-12 16:19:15] 2025-10-12 20:19:15,669 [wrapper] ==== wrapper stdout END ====
[2025-10-12 16:19:15] 2025-10-12 20:19:15,711 [wrapper] ==== wrapper stderr END ====
[2025-10-12 16:19:15]  *** Error codes and diagnostics ***
[2025-10-12 16:19:15]     "exeErrorCode": 0,
[2025-10-12 16:19:15]     "exeErrorDiag": "",
[2025-10-12 16:19:15]     "pilotErrorCode": 0,
[2025-10-12 16:19:15]     "pilotErrorDiag": "",
[2025-10-12 16:19:15]  *** Listing of results directory ***
[2025-10-12 16:19:15] total 417888
[2025-10-12 16:19:15] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 04:37 pilot3.tar.gz
[2025-10-12 16:19:15] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 04:46 queuedata.json
[2025-10-12 16:19:15] -rwx------. 1 boincer umatlas     36292 Oct 12 04:46 runpilot2-wrapper.sh
[2025-10-12 16:19:15] -rw-r--r--. 1 boincer umatlas       100 Oct 12 13:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 16:19:15] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 13:01 run_atlas
[2025-10-12 16:19:15] -rw-r--r--. 1 boincer umatlas       105 Oct 12 13:01 job.xml
[2025-10-12 16:19:15] -rw-r--r--. 2 boincer umatlas 220807030 Oct 12 13:01 EVNT.46676267._003545.pool.root.1
[2025-10-12 16:19:15] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:01 start_atlas.sh
[2025-10-12 16:19:15] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 13:01 shared
[2025-10-12 16:19:15] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 13:01 input.tar.gz
[2025-10-12 16:19:15] -rw-r--r--. 1 boincer umatlas         0 Oct 12 13:01 boinc_lockfile
[2025-10-12 16:19:15] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 13:01 pandaJob.out
[2025-10-12 16:19:15] -rw-------. 1 boincer umatlas    975528 Oct 12 13:02 agis_schedconf.cvmfs.json
[2025-10-12 16:19:15] drwx------. 5 boincer umatlas      4096 Oct 12 13:02 pilot3
[2025-10-12 16:19:15] -rw-------. 1 boincer umatlas 199337774 Oct 12 16:16 HITS.46676269._074580.pool.root.1
[2025-10-12 16:19:15] -rw-r--r--. 1 boincer umatlas       531 Oct 12 16:16 boinc_task_state.xml
[2025-10-12 16:19:15] -rw-------. 1 boincer umatlas      1043 Oct 12 16:17 memory_monitor_summary.json
[2025-10-12 16:19:15] -rw-------. 1 boincer umatlas   1560580 Oct 12 16:17 agis_ddmendpoints.agis.ALL.json
[2025-10-12 16:19:15] -rw-------. 1 boincer umatlas    459782 Oct 12 16:17 log.46676269._074580.job.log.tgz.1
[2025-10-12 16:19:15] -rw-------. 1 boincer umatlas      7831 Oct 12 16:18 heartbeat.json
[2025-10-12 16:19:15] -rw-------. 1 boincer umatlas        95 Oct 12 16:18 pilot_heartbeat.json
[2025-10-12 16:19:15] -rw-r--r--. 1 boincer umatlas      6842 Oct 12 16:19 init_data.xml
[2025-10-12 16:19:15] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 16:19 boinc_mmap_file
[2025-10-12 16:19:15] -rw-r--r--. 1 boincer umatlas        28 Oct 12 16:19 wrapper_checkpoint.txt
[2025-10-12 16:19:15] -rw-------. 1 boincer umatlas      4896 Oct 12 16:19 pilotlog.txt
[2025-10-12 16:19:15] -rw-------. 1 boincer umatlas   1471609 Oct 12 16:19 log.46676269._074580.job.log.1
[2025-10-12 16:19:15] -rw-------. 1 boincer umatlas       357 Oct 12 16:19 output.list
[2025-10-12 16:19:15] -rw-r--r--. 1 boincer umatlas       620 Oct 12 16:19 runtime_log
[2025-10-12 16:19:15] -rw-------. 1 boincer umatlas   1955840 Oct 12 16:19 result.tar.gz
[2025-10-12 16:19:15] -rw-r--r--. 1 boincer umatlas      8706 Oct 12 16:19 runtime_log.err
[2025-10-12 16:19:15] -rw-------. 1 boincer umatlas       655 Oct 12 16:19 L0GODmrt6R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmODjNDmgRztFn.diag
[2025-10-12 16:19:15] -rw-r--r--. 1 boincer umatlas     21019 Oct 12 16:19 stderr.txt
[2025-10-12 16:19:15] HITS file was successfully produced:
[2025-10-12 16:19:15] -rw-------. 1 boincer umatlas 199337774 Oct 12 16:16 shared/HITS.pool.root.1
[2025-10-12 16:19:15]  *** Contents of shared directory: ***
[2025-10-12 16:19:15] total 412792
[2025-10-12 16:19:15] -rw-r--r--. 2 boincer umatlas 220807030 Oct 12 13:01 ATLAS.root_0
[2025-10-12 16:19:15] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 13:01 start_atlas.sh
[2025-10-12 16:19:15] -rw-r--r--. 2 boincer umatlas    569677 Oct 12 13:01 input.tar.gz
[2025-10-12 16:19:15] -rw-------. 1 boincer umatlas 199337774 Oct 12 16:16 HITS.pool.root.1
[2025-10-12 16:19:15] -rw-------. 1 boincer umatlas   1955840 Oct 12 16:19 result.tar.gz
16:19:17 (3625915): run_atlas exited; CPU time 43446.785243
16:19:17 (3625915): called boinc_finish(0)

</stderr_txt>
]]>

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