Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:57:47 (1968430): wrapper (7.7.26015): starting
08:57:47 (1968430): wrapper: running run_atlas (--nthreads 8)
[2025-10-12 08:57:47] Arguments: --nthreads 8
[2025-10-12 08:57:47] Threads: 8
[2025-10-12 08:57:47] Checking for CVMFS
[2025-10-12 08:57:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 08:57:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 08:57:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 08:57:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 08:57:48] 2.13.2.0 128937 116020 182552 151620 3 432 30381788 39288833 6645 16776704 0 65389830 99.695 51300108 34867 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 08:57:48] CVMFS is ok
[2025-10-12 08:57:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 08:57:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 08:57:48] Further information can be found at the LHC@home message board.
[2025-10-12 08:57:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 08:57:48] Checking for apptainer binary...
[2025-10-12 08:57:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 08:57:48] Running /usr/bin/apptainer --version
[2025-10-12 08:57:48] apptainer version 1.4.3-1.el9
[2025-10-12 08:57:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 08:57:48] c-210-22.aglt2.org
[2025-10-12 08:57:48] apptainer works
[2025-10-12 08:57:48] Set ATHENA_PROC_NUMBER=8
[2025-10-12 08:57:48] Set ATHENA_CORE_NUMBER=8
[2025-10-12 08:57:48] Starting ATLAS job with PandaID=6839387283
[2025-10-12 08:57:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:10:46 (2604863): wrapper (7.7.26015): starting
17:10:46 (2604863): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 17:10:46] Arguments: --nthreads 12
[2025-10-12 17:10:46] Threads: 12
[2025-10-12 17:10:46] This job has been restarted, cleaning up previous attempt
[2025-10-12 17:10:46] Checking for CVMFS
[2025-10-12 17:10:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 17:10:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 17:10:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 17:10:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 17:10:48] 2.13.2.0 128937 116513 154404 151636 3 65 30857427 39288833 7925 16776704 0 65672371 99.696 51315887 34864 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 17:10:48] CVMFS is ok
[2025-10-12 17:10:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 17:10:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 17:10:48] Further information can be found at the LHC@home message board.
[2025-10-12 17:10:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 17:10:48] Checking for apptainer binary...
[2025-10-12 17:10:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 17:10:48] Running /usr/bin/apptainer --version
[2025-10-12 17:10:49] apptainer version 1.4.3-1.el9
[2025-10-12 17:10:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 17:10:50] c-210-22.aglt2.org
[2025-10-12 17:10:50] apptainer works
[2025-10-12 17:10:50] Set ATHENA_PROC_NUMBER=12
[2025-10-12 17:10:50] Set ATHENA_CORE_NUMBER=12
[2025-10-12 17:10:50] Starting ATLAS job with PandaID=6839387283
[2025-10-12 17:10:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 23:10:24]  *** The last 200 lines of the pilot log: ***
[2025-10-12 23:10:24] 2025-10-13 03:09:28,178 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 23:10:24] 2025-10-13 03:09:28,178 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 23:10:24] 2025-10-13 03:09:28,296 | INFO     | fitting pss+swap vs Time
[2025-10-12 23:10:24] 2025-10-13 03:09:28,297 | INFO     | sum of square deviations: 13296806698.357155
[2025-10-12 23:10:24] 2025-10-13 03:09:28,334 | INFO     | time since job start (21474s) is within the limit (172800.0s)
[2025-10-12 23:10:24] 2025-10-13 03:09:28,338 | INFO     | sum of deviations: -91665375646.54286
[2025-10-12 23:10:24] 2025-10-13 03:09:28,339 | INFO     | mean x: 1760314241.9571428
[2025-10-12 23:10:24] 2025-10-13 03:09:28,339 | INFO     | mean y: 2692465.497142857
[2025-10-12 23:10:24] 2025-10-13 03:09:28,339 | INFO     | -- intersect: 12137926879.704063
[2025-10-12 23:10:24] 2025-10-13 03:09:28,350 | INFO     | intersect: 12137926879.704063
[2025-10-12 23:10:24] 2025-10-13 03:09:28,351 | INFO     | chi2: 4.583877300691638
[2025-10-12 23:10:24] 2025-10-13 03:09:28,352 | INFO     | sum of square deviations: 12735287676.086952
[2025-10-12 23:10:24] 2025-10-13 03:09:28,408 | INFO     | sum of deviations: -18427386459.95653
[2025-10-12 23:10:24] 2025-10-13 03:09:28,409 | INFO     | mean x: 1760314089.4782608
[2025-10-12 23:10:24] 2025-10-13 03:09:28,409 | INFO     | mean y: 2712242.8057971015
[2025-10-12 23:10:24] 2025-10-13 03:09:28,409 | INFO     | -- intersect: 2549807278.4861627
[2025-10-12 23:10:24] 2025-10-13 03:09:28,409 | INFO     | intersect: 2549807278.4861627
[2025-10-12 23:10:24] 2025-10-13 03:09:28,410 | INFO     | chi2: 2.428640699256633
[2025-10-12 23:10:24] 2025-10-13 03:09:28,410 | INFO     | current chi2=2.428640699256633 (change=47.01776378503439 %)
[2025-10-12 23:10:24] 2025-10-13 03:09:28,411 | INFO     | sum of square deviations: 12189602823.705875
[2025-10-12 23:10:24] 2025-10-13 03:09:28,491 | INFO     | sum of deviations: -18474316258.235287
[2025-10-12 23:10:24] 2025-10-13 03:09:28,492 | INFO     | mean x: 1760313936.9705882
[2025-10-12 23:10:24] 2025-10-13 03:09:28,492 | INFO     | mean y: 2712229.6764705884
[2025-10-12 23:10:24] 2025-10-13 03:09:28,492 | INFO     | -- intersect: 2670608538.9909205
[2025-10-12 23:10:24] 2025-10-13 03:09:28,492 | INFO     | intersect: 2670608538.9909205
[2025-10-12 23:10:24] 2025-10-13 03:09:28,493 | INFO     | chi2: 2.4276563833349765
[2025-10-12 23:10:24] 2025-10-13 03:09:28,493 | INFO     | current chi2=2.4276563833349765 (change=0.04052949956566205 %)
[2025-10-12 23:10:24] 2025-10-13 03:09:28,493 | INFO     | right removable region: 339
[2025-10-12 23:10:24] 2025-10-13 03:09:28,494 | INFO     | sum of square deviations: 12734868720.23197
[2025-10-12 23:10:24] 2025-10-13 03:09:28,546 | INFO     | sum of deviations: -171157512404.00003
[2025-10-12 23:10:24] 2025-10-13 03:09:28,546 | INFO     | mean x: 1760314394.4927535
[2025-10-12 23:10:24] 2025-10-13 03:09:28,547 | INFO     | mean y: 2713950.4
[2025-10-12 23:10:24] 2025-10-13 03:09:28,547 | INFO     | -- intersect: 23661460611.18577
[2025-10-12 23:10:24] 2025-10-13 03:09:28,547 | INFO     | intersect: 23661460611.18577
[2025-10-12 23:10:24] 2025-10-13 03:09:28,548 | INFO     | chi2: 2.5306938465012356
[2025-10-12 23:10:24] 2025-10-13 03:09:28,548 | INFO     | current chi2=2.5306938465012356 (change=44.7914138949707 %)
[2025-10-12 23:10:24] 2025-10-13 03:09:28,589 | INFO     | sum of square deviations: 12189019285.811876
[2025-10-12 23:10:24] 2025-10-13 03:09:28,627 | INFO     | sum of deviations: -176660932239.694
[2025-10-12 23:10:24] 2025-10-13 03:09:28,628 | INFO     | mean x: 1760314547.0235295
[2025-10-12 23:10:24] 2025-10-13 03:09:28,628 | INFO     | mean y: 2715462.711764706
[2025-10-12 23:10:24] 2025-10-13 03:09:28,628 | INFO     | -- intersect: 25515744987.101265
[2025-10-12 23:10:24] 2025-10-13 03:09:28,628 | INFO     | intersect: 25515744987.101265
[2025-10-12 23:10:24] 2025-10-13 03:09:28,629 | INFO     | chi2: 2.471669909431317
[2025-10-12 23:10:24] 2025-10-13 03:09:28,629 | INFO     | current chi2=2.471669909431317 (change=2.332322305660216 %)
[2025-10-12 23:10:24] 2025-10-13 03:09:28,629 | INFO     | left removable region: 20
[2025-10-12 23:10:24] 2025-10-13 03:09:28,630 | INFO     | sum of square deviations: 10067175265.548645
[2025-10-12 23:10:24] 2025-10-13 03:09:28,654 | INFO     | sum of deviations: -82618900684.48273
[2025-10-12 23:10:24] 2025-10-13 03:09:28,654 | INFO     | mean x: 1760314516.5830722
[2025-10-12 23:10:24] 2025-10-13 03:09:28,654 | INFO     | mean y: 2730248.206896552
[2025-10-12 23:10:24] 2025-10-13 03:09:28,654 | INFO     | -- intersect: 14449210654.357256
[2025-10-12 23:10:24] 2025-10-13 03:09:28,655 | INFO     | intersect: 14449210654.357256
[2025-10-12 23:10:24] 2025-10-13 03:09:28,655 | INFO     | chi2: 0.23949603862939375
[2025-10-12 23:10:24] 2025-10-13 03:09:28,656 | INFO     | -- intersect: 14449210654.357256
[2025-10-12 23:10:24] 2025-10-13 03:09:28,656 | INFO     | current memory leak: -8.21 B/s (using 319 data points, chi2=0.24)
[2025-10-12 23:10:24] 2025-10-13 03:09:28,692 | INFO     | could have reported an average CPU frequency of 2600 MHz (6 samples)
[2025-10-12 23:10:24] 2025-10-13 03:09:28,692 | INFO     | ..............................
[2025-10-12 23:10:24] 2025-10-13 03:09:28,693 | INFO     | . Timing measurements:
[2025-10-12 23:10:24] 2025-10-13 03:09:28,693 | INFO     | . get job = 0 s
[2025-10-12 23:10:24] 2025-10-13 03:09:28,693 | INFO     | . initial setup = 4 s
[2025-10-12 23:10:24] 2025-10-13 03:09:28,693 | INFO     | . payload setup = 28 s
[2025-10-12 23:10:24] 2025-10-13 03:09:28,693 | INFO     | . stage-in = 0 s
[2025-10-12 23:10:24] 2025-10-13 03:09:28,693 | INFO     | . payload execution = 21318 s
[2025-10-12 23:10:24] 2025-10-13 03:09:28,693 | INFO     | . stage-out = 10 s
[2025-10-12 23:10:24] 2025-10-13 03:09:28,693 | INFO     | . log creation = 1 s
[2025-10-12 23:10:24] 2025-10-13 03:09:28,694 | INFO     | ..............................
[2025-10-12 23:10:24] 2025-10-13 03:09:29,503 | INFO     | 
[2025-10-12 23:10:24] 2025-10-13 03:09:29,504 | INFO     | job summary report
[2025-10-12 23:10:24] 2025-10-13 03:09:29,504 | INFO     | --------------------------------------------------
[2025-10-12 23:10:24] 2025-10-13 03:09:29,504 | INFO     | PanDA job id: 6839387283
[2025-10-12 23:10:24] 2025-10-13 03:09:29,504 | INFO     | task id: 46676269
[2025-10-12 23:10:24] 2025-10-13 03:09:29,504 | INFO     | errors: (none)
[2025-10-12 23:10:24] 2025-10-13 03:09:29,504 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 23:10:24] 2025-10-13 03:09:29,504 | INFO     | pilot state: finished 
[2025-10-12 23:10:24] 2025-10-13 03:09:29,504 | INFO     | transexitcode: 0
[2025-10-12 23:10:24] 2025-10-13 03:09:29,505 | INFO     | exeerrorcode: 0
[2025-10-12 23:10:24] 2025-10-13 03:09:29,505 | INFO     | exeerrordiag: 
[2025-10-12 23:10:24] 2025-10-13 03:09:29,505 | INFO     | exitcode: 0
[2025-10-12 23:10:24] 2025-10-13 03:09:29,505 | INFO     | exitmsg: OK
[2025-10-12 23:10:24] 2025-10-13 03:09:29,505 | INFO     | cpuconsumptiontime: 54803 s
[2025-10-12 23:10:24] 2025-10-13 03:09:29,505 | INFO     | nevents: 400
[2025-10-12 23:10:24] 2025-10-13 03:09:29,505 | INFO     | neventsw: 0
[2025-10-12 23:10:24] 2025-10-13 03:09:29,505 | INFO     | pid: 2615127
[2025-10-12 23:10:24] 2025-10-13 03:09:29,505 | INFO     | pgrp: 2615127
[2025-10-12 23:10:24] 2025-10-13 03:09:29,506 | INFO     | corecount: 12
[2025-10-12 23:10:24] 2025-10-13 03:09:29,506 | INFO     | event service: False
[2025-10-12 23:10:24] 2025-10-13 03:09:29,506 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 13: 2348913, 23: 2348969, 24: 2349259, 34: 2349415, 21353: 2375316, 21354: 2375315, 21365: 2384425, 21425: 2384393}
[2025-10-12 23:10:24] 2025-10-13 03:09:29,506 | INFO     | --------------------------------------------------
[2025-10-12 23:10:24] 2025-10-13 03:09:29,506 | INFO     | 
[2025-10-12 23:10:24] 2025-10-13 03:09:29,506 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-12 23:10:24] 2025-10-13 03:09:29,887 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 23:10:24] 2025-10-13 03:09:29,887 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 23:10:24] 2025-10-13 03:09:29,887 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 23:10:24] 2025-10-13 03:09:29,887 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 23:10:24] 2025-10-13 03:09:29,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 23:10:24] 2025-10-13 03:09:29,888 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 23:10:24] 2025-10-13 03:09:29,888 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 23:10:24] 2025-10-13 03:09:29,888 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 23:10:24] 2025-10-13 03:09:29,888 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 23:10:24] 2025-10-13 03:09:29,888 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 23:10:24] 2025-10-13 03:09:29,888 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 23:10:24] 2025-10-13 03:09:29,888 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 23:10:24] 2025-10-13 03:09:29,888 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 23:10:24] 2025-10-13 03:09:29,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 23:10:24] 2025-10-13 03:09:29,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 23:10:24] 2025-10-13 03:09:29,889 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 23:10:24] 2025-10-13 03:09:29,889 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 23:10:24] 2025-10-13 03:09:29,889 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 23:10:24] 2025-10-13 03:09:29,889 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 23:10:24] 2025-10-13 03:09:29,889 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 23:10:24] 2025-10-13 03:09:29,889 | INFO     | job 6839387283 has completed (purged errors)
[2025-10-12 23:10:24] 2025-10-13 03:09:29,889 | INFO     | overall cleanup function is called
[2025-10-12 23:10:24] 2025-10-13 03:09:30,941 | INFO     | --- collectZombieJob: --- 10, [2615127]
[2025-10-12 23:10:24] 2025-10-13 03:09:30,942 | INFO     | zombie collector waiting for pid 2615127
[2025-10-12 23:10:24] 2025-10-13 03:09:30,942 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 23:10:24] 2025-10-13 03:09:30,942 | INFO     | collected zombie processes
[2025-10-12 23:10:24] 2025-10-13 03:09:30,942 | INFO     | will attempt to kill all subprocesses of pid=2615127
[2025-10-12 23:10:24] 2025-10-13 03:09:33,605 | INFO     | process IDs to be killed: [2615127] (in reverse order)
[2025-10-12 23:10:24] 2025-10-13 03:09:34,419 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 23:10:24] 2025-10-13 03:09:34,419 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 23:10:24] 2025-10-13 03:09:34,511 | INFO     | did not find any defunct processes belonging to 2615127
[2025-10-12 23:10:24] 2025-10-13 03:09:34,611 | INFO     | did not find any defunct processes belonging to 2615127
[2025-10-12 23:10:24] 2025-10-13 03:09:34,611 | INFO     | ready for new job
[2025-10-12 23:10:24] 2025-10-13 03:09:34,611 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 23:10:24] 2025-10-13 03:09:34,614 | INFO     | ***************************************
[2025-10-12 23:10:24] 2025-10-13 03:09:34,669 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 23:10:24] 2025-10-13 03:09:34,670 | INFO     | ***************************************
[2025-10-12 23:10:24] 2025-10-13 03:09:34,670 | INFO     | 
[2025-10-12 23:10:24] 2025-10-13 03:09:34,672 | INFO     | architecture information:
[2025-10-12 23:10:24] 2025-10-13 03:09:34,712 | INFO     | executing command: cat /etc/os-release
[2025-10-12 23:10:24] 2025-10-13 03:09:34,947 | INFO     | cat /etc/os-release:
[2025-10-12 23:10:24] NAME="CentOS Linux"
[2025-10-12 23:10:24] VERSION="7 (Core)"
[2025-10-12 23:10:24] ID="centos"
[2025-10-12 23:10:24] ID_LIKE="rhel fedora"
[2025-10-12 23:10:24] VERSION_ID="7"
[2025-10-12 23:10:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 23:10:24] ANSI_COLOR="0;31"
[2025-10-12 23:10:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 23:10:24] HOME_URL="https://www.centos.org/"
[2025-10-12 23:10:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 23:10:24] 
[2025-10-12 23:10:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 23:10:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 23:10:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 23:10:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 23:10:24] 
[2025-10-12 23:10:24] 2025-10-13 03:09:34,947 | INFO     | ***************************************
[2025-10-12 23:10:24] 2025-10-13 03:09:35,451 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-12 23:10:24] 2025-10-13 03:09:35,702 | INFO     | sufficient remaining disk space (53114568704 B)
[2025-10-12 23:10:24] 2025-10-13 03:09:35,702 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 23:10:24] 2025-10-13 03:09:35,702 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 23:10:24] 2025-10-13 03:09:35,703 | INFO     | update_server=False
[2025-10-12 23:10:24] 2025-10-13 03:09:35,703 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 23:10:24] 2025-10-13 03:09:35,703 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 23:10:24] 2025-10-13 03:09:35,925 | INFO     | all job control threads have been joined
[2025-10-12 23:10:24] 2025-10-13 03:09:36,407 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:10:24] 2025-10-13 03:09:36,408 | INFO     | aborting loop
[2025-10-12 23:10:24] 2025-10-13 03:09:36,626 | INFO     | all payload control threads have been joined
[2025-10-12 23:10:24] 2025-10-13 03:09:36,708 | INFO     | [job] retrieve thread has finished
[2025-10-12 23:10:24] 2025-10-13 03:09:36,794 | INFO     | all data control threads have been joined
[2025-10-12 23:10:24] 2025-10-13 03:09:36,931 | INFO     | [job] control thread has finished
[2025-10-12 23:10:24] 2025-10-13 03:09:37,056 | INFO     | [payload] validate_post thread has finished
[2025-10-12 23:10:24] 2025-10-13 03:09:37,267 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 23:10:24] 2025-10-13 03:09:37,283 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 23:10:24] 2025-10-13 03:09:37,284 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 23:10:24] 2025-10-13 03:09:37,356 | INFO     | [job] validate thread has finished
[2025-10-12 23:10:24] 2025-10-13 03:09:37,367 | INFO     | [data] copytool_in thread has finished
[2025-10-12 23:10:24] 2025-10-13 03:09:37,386 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 23:10:24] 2025-10-13 03:09:37,413 | INFO     | [job] job monitor thread has finished
[2025-10-12 23:10:24] 2025-10-13 03:09:37,557 | INFO     | [payload] failed_post thread has finished
[2025-10-12 23:10:24] 2025-10-13 03:09:37,632 | INFO     | [payload] control thread has finished
[2025-10-12 23:10:24] 2025-10-13 03:09:37,710 | INFO     | [data] copytool_out thread has finished
[2025-10-12 23:10:24] 2025-10-13 03:09:37,815 | INFO     | [data] control thread has finished
[2025-10-12 23:10:24] 2025-10-13 03:09:38,693 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 23:10:24] 2025-10-13 03:09:39,176 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 23:10:24] 2025-10-13 03:09:39,699 | INFO     | [job] queue monitor thread has finished
[2025-10-12 23:10:24] 2025-10-13 03:09:43,188 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 23:10:24] 2025-10-13 03:10:03,711 | INFO     | PID=2608635 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 23:10:24] 2025-10-13 03:10:03,711 | INFO     | .. there are 7 such processes running
[2025-10-12 23:10:24] 2025-10-13 03:10:03,712 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 23:10:24] 2025-10-13 03:10:03,712 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 23:10:24] 2025-10-13 03:10:03,713 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 23:10:24] 2025-10-13 03:10:13,973 | INFO     | [monitor] cgroup control has ended
[2025-10-12 23:10:24] 2025-10-13 03:10:15,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139637398181696)>', '<ExcThread(monitor, started 139637116864256)>']
[2025-10-12 23:10:24] 2025-10-13 03:10:15,785 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 23:10:24] 2025-10-13 03:10:15,785 | INFO     | [monitor] control thread has ended
[2025-10-12 23:10:24] 2025-10-13 03:10:20,544 | INFO     | all workflow threads have been joined
[2025-10-12 23:10:24] 2025-10-13 03:10:20,544 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 23:10:24] 2025-10-13 03:10:20,545 | INFO     | traces error code: 0
[2025-10-12 23:10:24] 2025-10-13 03:10:20,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 23:10:24] 2025-10-13 03:10:22,681 [wrapper] ==== pilot stdout END ====
[2025-10-12 23:10:24] 2025-10-13 03:10:22,809 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 23:10:24] 2025-10-13 03:10:22,872 [wrapper] pilotpid: 2608635
[2025-10-12 23:10:24] 2025-10-13 03:10:22,898 [wrapper] Pilot exit status: 0
[2025-10-12 23:10:24] 2025-10-13 03:10:23,175 [wrapper] pandaids: 6839387283 6839387283
[2025-10-12 23:10:24] 2025-10-13 03:10:23,297 [wrapper] cleanup supervisor_pilot 3032143 2608636
[2025-10-12 23:10:24] 2025-10-13 03:10:23,421 [wrapper] Test setup, not cleaning
[2025-10-12 23:10:24] 2025-10-13 03:10:23,477 [wrapper] apfmon messages muted
[2025-10-12 23:10:24] 2025-10-13 03:10:23,559 [wrapper] ==== wrapper stdout END ====
[2025-10-12 23:10:24] 2025-10-13 03:10:23,638 [wrapper] ==== wrapper stderr END ====
[2025-10-12 23:10:24]  *** Error codes and diagnostics ***
[2025-10-12 23:10:24]     "exeErrorCode": 0,
[2025-10-12 23:10:24]     "exeErrorDiag": "",
[2025-10-12 23:10:24]     "pilotErrorCode": 0,
[2025-10-12 23:10:24]     "pilotErrorDiag": "",
[2025-10-12 23:10:24]  *** Listing of results directory ***
[2025-10-12 23:10:24] total 630268
[2025-10-12 23:10:24] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-12 23:10:24] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 00:11 pilot3.tar.gz
[2025-10-12 23:10:24] -rwx------. 1 boincer umatlas     36292 Oct 12 00:27 runpilot2-wrapper.sh
[2025-10-12 23:10:24] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 00:27 queuedata.json
[2025-10-12 23:10:24] -rw-r--r--. 1 boincer umatlas       100 Oct 12 08:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 23:10:24] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 12 08:57 run_atlas
[2025-10-12 23:10:24] -rw-r--r--. 1 boincer umatlas       105 Oct 12 08:57 job.xml
[2025-10-12 23:10:24] -rw-r--r--. 3 boincer umatlas 219454554 Oct 12 08:57 EVNT.46676267._004058.pool.root.1
[2025-10-12 23:10:24] -rw-r--r--. 3 boincer umatlas 219454554 Oct 12 08:57 ATLAS.root_0
[2025-10-12 23:10:24] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 08:57 start_atlas.sh
[2025-10-12 23:10:24] drwxrwx--x. 2 boincer umatlas      4096 Oct 12 08:57 shared
[2025-10-12 23:10:24] -rw-r--r--. 2 boincer umatlas    569674 Oct 12 08:57 input.tar.gz
[2025-10-12 23:10:24] -rw-r--r--. 1 boincer umatlas         0 Oct 12 08:57 boinc_lockfile
[2025-10-12 23:10:24] -rw-r--r--. 1 boincer umatlas      2550 Oct 12 17:10 pandaJob.out
[2025-10-12 23:10:24] -rw-------. 1 boincer umatlas    975536 Oct 12 17:11 agis_schedconf.cvmfs.json
[2025-10-12 23:10:24] -rw-------. 1 boincer umatlas 198400125 Oct 12 23:05 HITS.46676269._071214.pool.root.1
[2025-10-12 23:10:24] -rw-r--r--. 1 boincer umatlas       531 Oct 12 23:05 boinc_task_state.xml
[2025-10-12 23:10:24] -rw-------. 1 boincer umatlas      1051 Oct 12 23:08 memory_monitor_summary.json
[2025-10-12 23:10:24] -rw-------. 1 boincer umatlas   1560580 Oct 12 23:08 agis_ddmendpoints.agis.ALL.json
[2025-10-12 23:10:24] -rw-------. 1 boincer umatlas    502822 Oct 12 23:08 log.46676269._071214.job.log.tgz.1
[2025-10-12 23:10:24] -rw-------. 1 boincer umatlas      7852 Oct 12 23:09 heartbeat.json
[2025-10-12 23:10:24] -rw-r--r--. 1 boincer umatlas      6661 Oct 12 23:09 init_data.xml
[2025-10-12 23:10:24] -rw-------. 1 boincer umatlas        96 Oct 12 23:10 pilot_heartbeat.json
[2025-10-12 23:10:24] -rw-------. 1 boincer umatlas      4823 Oct 12 23:10 pilotlog.txt
[2025-10-12 23:10:24] -rw-------. 1 boincer umatlas   1591362 Oct 12 23:10 log.46676269._071214.job.log.1
[2025-10-12 23:10:24] -rw-r--r--. 1 boincer umatlas        28 Oct 12 23:10 wrapper_checkpoint.txt
[2025-10-12 23:10:24] -rw-r--r--. 1 boincer umatlas      8192 Oct 12 23:10 boinc_mmap_file
[2025-10-12 23:10:24] -rw-------. 1 boincer umatlas       357 Oct 12 23:10 output.list
[2025-10-12 23:10:24] -rw-r--r--. 1 boincer umatlas       620 Oct 12 23:10 runtime_log
[2025-10-12 23:10:24] -rw-------. 1 boincer umatlas   2109440 Oct 12 23:10 result.tar.gz
[2025-10-12 23:10:24] -rw-r--r--. 1 boincer umatlas      8791 Oct 12 23:10 runtime_log.err
[2025-10-12 23:10:24] -rw-------. 1 boincer umatlas       786 Oct 12 23:10 OfNODmlr2R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmmDTMDmfqk0dn.diag
[2025-10-12 23:10:24] -rw-r--r--. 1 boincer umatlas     23209 Oct 12 23:10 stderr.txt
[2025-10-12 23:10:25] HITS file was successfully produced:
[2025-10-12 23:10:25] -rw-------. 1 boincer umatlas 198400125 Oct 12 23:05 shared/HITS.pool.root.1
[2025-10-12 23:10:25]  *** Contents of shared directory: ***
[2025-10-12 23:10:25] total 410704
[2025-10-12 23:10:25] -rw-r--r--. 3 boincer umatlas 219454554 Oct 12 08:57 ATLAS.root_0
[2025-10-12 23:10:25] -rw-r--r--. 2 boincer umatlas     15120 Oct 12 08:57 start_atlas.sh
[2025-10-12 23:10:25] -rw-r--r--. 2 boincer umatlas    569674 Oct 12 08:57 input.tar.gz
[2025-10-12 23:10:25] -rw-------. 1 boincer umatlas 198400125 Oct 12 23:05 HITS.pool.root.1
[2025-10-12 23:10:25] -rw-------. 1 boincer umatlas   2109440 Oct 12 23:10 result.tar.gz
23:10:26 (2604863): run_atlas exited; CPU time 54761.788700
23:10:26 (2604863): called boinc_finish(0)

</stderr_txt>
]]>

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