Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:43:24 (2731075): wrapper (7.7.26015): starting
05:43:24 (2731075): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 05:43:24] Arguments: --nthreads 3
[2025-10-13 05:43:24] Threads: 3
[2025-10-13 05:43:24] Checking for CVMFS
[2025-10-13 05:43:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:43:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:43:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:43:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:43:24] 2.9.2.0 1182477 5342 82240 151647 2 57 3838654 36864000 0 130560 0 4078882 99.991 185271 863 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 05:43:24] CVMFS is ok
[2025-10-13 05:43:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:43:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:43:24] Further information can be found at the LHC@home message board.
[2025-10-13 05:43:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:43:24] Checking for apptainer binary...
[2025-10-13 05:43:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:43:24] Running /usr/bin/apptainer --version
[2025-10-13 05:43:24] apptainer version 1.4.1-1.1
[2025-10-13 05:43:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:43:24] thA332
[2025-10-13 05:43:24] apptainer works
[2025-10-13 05:43:24] Set ATHENA_PROC_NUMBER=3
[2025-10-13 05:43:24] Set ATHENA_CORE_NUMBER=3
[2025-10-13 05:43:24] Starting ATLAS job with PandaID=6839774939
[2025-10-13 05:43:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:08:59]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:08:59] NAME="CentOS Linux"
[2025-10-13 07:08:59] VERSION="7 (Core)"
[2025-10-13 07:08:59] ID="centos"
[2025-10-13 07:08:59] ID_LIKE="rhel fedora"
[2025-10-13 07:08:59] VERSION_ID="7"
[2025-10-13 07:08:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:08:59] ANSI_COLOR="0;31"
[2025-10-13 07:08:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:08:59] HOME_URL="https://www.centos.org/"
[2025-10-13 07:08:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:08:59] 
[2025-10-13 07:08:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:08:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:08:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:08:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:08:59] 
[2025-10-13 07:08:59] 2025-10-13 05:08:28,948 | INFO     | ***************************************
[2025-10-13 07:08:59] 2025-10-13 05:08:29,451 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 07:08:59] 2025-10-13 05:08:29,464 | INFO     | sufficient remaining disk space (255648071680 B)
[2025-10-13 07:08:59] 2025-10-13 05:08:29,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:08:59] 2025-10-13 05:08:29,464 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:08:59] 2025-10-13 05:08:29,464 | INFO     | update_server=False
[2025-10-13 07:08:59] 2025-10-13 05:08:29,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:08:59] 2025-10-13 05:08:29,464 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:08:59] 2025-10-13 05:08:29,464 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:08:59] 2025-10-13 05:08:29,464 | INFO     | aborting loop
[2025-10-13 07:08:59] 2025-10-13 05:08:29,581 | INFO     | all job control threads have been joined
[2025-10-13 07:08:59] 2025-10-13 05:08:29,685 | INFO     | all data control threads have been joined
[2025-10-13 07:08:59] 2025-10-13 05:08:29,986 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:08:59] 2025-10-13 05:08:30,469 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:08:59] 2025-10-13 05:08:30,470 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:08:59] 2025-10-13 05:08:30,470 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:08:59] 2025-10-13 05:08:30,486 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:08:59] 2025-10-13 05:08:30,587 | INFO     | [job] control thread has finished
[2025-10-13 07:08:59] 2025-10-13 05:08:30,638 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:08:59] 2025-10-13 05:08:30,691 | INFO     | [data] control thread has finished
[2025-10-13 07:08:59] 2025-10-13 05:08:30,934 | INFO     | all payload control threads have been joined
[2025-10-13 07:08:59] 2025-10-13 05:08:30,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:08:59] 2025-10-13 05:08:31,051 | INFO     | [job] validate thread has finished
[2025-10-13 07:08:59] 2025-10-13 05:08:31,149 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:08:59] 2025-10-13 05:08:31,210 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:08:59] 2025-10-13 05:08:31,218 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:08:59] 2025-10-13 05:08:31,765 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:08:59] 2025-10-13 05:08:31,940 | INFO     | [payload] control thread has finished
[2025-10-13 07:08:59] 2025-10-13 05:08:31,992 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:08:59] 2025-10-13 05:08:35,001 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:08:59] 2025-10-13 05:08:35,811 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:08:59] 2025-10-13 05:08:39,916 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:08:59] 2025-10-13 05:08:40,922 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:08:59] 2025-10-13 05:08:42,658 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140644031313728)>', '<ExcThread(monitor, started 140643749824256)>']
[2025-10-13 07:08:59] 2025-10-13 05:08:47,684 | INFO     | all workflow threads have been joined
[2025-10-13 07:08:59] 2025-10-13 05:08:47,684 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:08:59] 2025-10-13 05:08:47,685 | INFO     | traces error code: 0
[2025-10-13 07:08:59] 2025-10-13 05:08:47,685 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:08:59] 2025-10-13 05:08:59,848 | INFO     | PID=2734790 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:08:59] 2025-10-13 05:08:59,849 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:08:59] 2025-10-13 05:08:59,849 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:08:59] 2025-10-13 05:08:59,849 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:08:59] 2025-10-13 05:08:59,849 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:08:59] 2025-10-13 05:08:59,849 | CRITICAL | thread 'MainThread' is not alive
[2025-10-13 07:08:59] 2025-10-13 05:08:59,849 | INFO     | [monitor] control thread has ended
[2025-10-13 07:08:59] 2025-10-13 05:08:59,895 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:08:59] 2025-10-13 05:08:59,897 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:08:59] 2025-10-13 05:08:59,900 [wrapper] pilotpid: 2734790
[2025-10-13 07:08:59] 2025-10-13 05:08:59,902 [wrapper] Pilot exit status: 0
[2025-10-13 07:08:59] 2025-10-13 05:08:59,909 [wrapper] pandaids: 6839774939
[2025-10-13 07:08:59] 2025-10-13 05:08:59,925 [wrapper] cleanup supervisor_pilot 2753185 2734791
[2025-10-13 07:08:59] 2025-10-13 05:08:59,927 [wrapper] Test setup, not cleaning
[2025-10-13 07:08:59] 2025-10-13 05:08:59,929 [wrapper] apfmon messages muted
[2025-10-13 07:08:59] 2025-10-13 05:08:59,931 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:08:59] 2025-10-13 05:08:59,934 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:08:59]  *** Error codes and diagnostics ***
[2025-10-13 07:08:59]     "exeErrorCode": 0,
[2025-10-13 07:08:59]     "exeErrorDiag": "",
[2025-10-13 07:08:59]     "pilotErrorCode": 0,
[2025-10-13 07:08:59]     "pilotErrorDiag": "",
[2025-10-13 07:08:59]  *** Listing of results directory ***
[2025-10-13 07:08:59] total 410516
[2025-10-13 07:08:59] -rw-r--r-- 1 boinc boinc    557409 Oct 12 10:37 pilot3.tar.gz
[2025-10-13 07:08:59] -rwx------ 1 boinc boinc     36292 Oct 12 10:46 runpilot2-wrapper.sh
[2025-10-13 07:08:59] -rw-r--r-- 1 boinc boinc      5112 Oct 12 10:46 queuedata.json
[2025-10-13 07:08:59] -rw-r--r-- 1 boinc boinc       100 Oct 13 05:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:08:59] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 05:43 run_atlas
[2025-10-13 07:08:59] -rw-r--r-- 1 boinc boinc       105 Oct 13 05:43 job.xml
[2025-10-13 07:08:59] -rw-r--r-- 2 boinc boinc 219744670 Oct 13 05:43 EVNT.46676267._003549.pool.root.1
[2025-10-13 07:08:59] -rw-r--r-- 2 boinc boinc    569678 Oct 13 05:43 input.tar.gz
[2025-10-13 07:08:59] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:43 start_atlas.sh
[2025-10-13 07:08:59] drwxrwx--x 2 boinc boinc      4096 Oct 13 05:43 shared
[2025-10-13 07:08:59] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:43 boinc_setup_complete
[2025-10-13 07:08:59] -rw-r--r-- 1 boinc boinc      6437 Oct 13 05:43 init_data.xml
[2025-10-13 07:08:59] -rw-r--r-- 1 boinc boinc         0 Oct 13 05:43 boinc_lockfile
[2025-10-13 07:08:59] -rw-r--r-- 1 boinc boinc      2550 Oct 13 05:43 pandaJob.out
[2025-10-13 07:08:59] -rw------- 1 boinc boinc    974373 Oct 13 05:43 agis_schedconf.cvmfs.json
[2025-10-13 07:08:59] -rw------- 1 boinc boinc   1560580 Oct 13 05:43 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:08:59] drwx------ 5 boinc boinc      4096 Oct 13 05:43 pilot3
[2025-10-13 07:08:59] -rw------- 1 boinc boinc 194734101 Oct 13 07:08 HITS.46676269._074685.pool.root.1
[2025-10-13 07:08:59] -rw-r--r-- 1 boinc boinc       529 Oct 13 07:08 boinc_task_state.xml
[2025-10-13 07:08:59] -rw------- 1 boinc boinc      1021 Oct 13 07:08 memory_monitor_summary.json
[2025-10-13 07:08:59] -rw------- 1 boinc boinc    257244 Oct 13 07:08 log.46676269._074685.job.log.tgz.1
[2025-10-13 07:08:59] -rw------- 1 boinc boinc      7763 Oct 13 07:08 heartbeat.json
[2025-10-13 07:08:59] -rw-r--r-- 1 boinc boinc      8192 Oct 13 07:08 boinc_mmap_file
[2025-10-13 07:08:59] -rw-r--r-- 1 boinc boinc        27 Oct 13 07:08 wrapper_checkpoint.txt
[2025-10-13 07:08:59] -rw------- 1 boinc boinc       817 Oct 13 07:08 pilotlog.txt
[2025-10-13 07:08:59] -rw------- 1 boinc boinc        95 Oct 13 07:08 pilot_heartbeat.json
[2025-10-13 07:08:59] -rw------- 1 boinc boinc    746680 Oct 13 07:08 log.46676269._074685.job.log.1
[2025-10-13 07:08:59] -rw------- 1 boinc boinc       357 Oct 13 07:08 output.list
[2025-10-13 07:08:59] -rw-r--r-- 1 boinc boinc       620 Oct 13 07:08 runtime_log
[2025-10-13 07:08:59] -rw------- 1 boinc boinc   1024000 Oct 13 07:08 result.tar.gz
[2025-10-13 07:08:59] -rw-r--r-- 1 boinc boinc      8777 Oct 13 07:08 runtime_log.err
[2025-10-13 07:08:59] -rw------- 1 boinc boinc       658 Oct 13 07:08 etWLDmMu6R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmUXTMDmqDabln.diag
[2025-10-13 07:08:59] -rw-r--r-- 1 boinc boinc      8891 Oct 13 07:08 stderr.txt
[2025-10-13 07:08:59] HITS file was successfully produced:
[2025-10-13 07:08:59] -rw------- 1 boinc boinc 194734101 Oct 13 07:08 shared/HITS.pool.root.1
[2025-10-13 07:08:59]  *** Contents of shared directory: ***
[2025-10-13 07:08:59] total 406348
[2025-10-13 07:08:59] -rw-r--r-- 2 boinc boinc 219744670 Oct 13 05:43 ATLAS.root_0
[2025-10-13 07:08:59] -rw-r--r-- 2 boinc boinc    569678 Oct 13 05:43 input.tar.gz
[2025-10-13 07:08:59] -rw-r--r-- 2 boinc boinc     15120 Oct 13 05:43 start_atlas.sh
[2025-10-13 07:08:59] -rw------- 1 boinc boinc 194734101 Oct 13 07:08 HITS.pool.root.1
[2025-10-13 07:08:59] -rw------- 1 boinc boinc   1024000 Oct 13 07:08 result.tar.gz
07:09:01 (2731075): run_atlas exited; CPU time 14643.769736
07:09:01 (2731075): called boinc_finish(0)

</stderr_txt>
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