Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
02:30:30 (2822803): wrapper (7.7.26015): starting
02:30:30 (2822803): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 02:30:30] Arguments: --nthreads 12
[2025-10-13 02:30:30] Threads: 12
[2025-10-13 02:30:30] Checking for CVMFS
[2025-10-13 02:30:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:30:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:30:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:30:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:30:31] 2.12.7.0 2633540 696 53696 151642 2 57 3348170 4096000 0 130560 0 512853 99.987 27950 47 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-13 02:30:31] CVMFS is ok
[2025-10-13 02:30:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:30:31] Checking for apptainer binary...
[2025-10-13 02:30:31] apptainer is not installed, using version from CVMFS
[2025-10-13 02:30:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:30:31] lithium
[2025-10-13 02:30:31] apptainer works
[2025-10-13 02:30:31] Set ATHENA_PROC_NUMBER=12
[2025-10-13 02:30:31] Set ATHENA_CORE_NUMBER=12
[2025-10-13 02:30:31] Starting ATLAS job with PandaID=6839870043
[2025-10-13 02:30:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:07:55]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:07:55]  mtime=0
[2025-10-13 04:07:55]  protocol_id=None
[2025-10-13 04:07:55]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 04:07:55]  replicas=None
[2025-10-13 04:07:55]  scope=mc23_13p6TeV
[2025-10-13 04:07:55]  status=None
[2025-10-13 04:07:55]  status_code=0
[2025-10-13 04:07:55]  storage_token=
[2025-10-13 04:07:55]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6839870043/log.46676269._077017.job.log.tgz.1
[2025-10-13 04:07:55]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/c8/log.46676269._077017.job.log.tgz.1
[2025-10-13 04:07:55]  workdir=None
[2025-10-13 04:07:55] ]
[2025-10-13 04:07:55] 2025-10-13 02:07:16,814 | INFO     | transferring file log.46676269._077017.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6839870043/log.46676269._077017.job.log.tgz.1 to /var/lib/boinc
[2025-10-13 04:07:55] 2025-10-13 02:07:16,814 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6839870043/log.46676269._077017.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.466762
[2025-10-13 04:07:55] 2025-10-13 02:07:16,827 | INFO     | adding to output.list: log.46676269._077017.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5c/c8/log.46676269._077017.job.log.tg
[2025-10-13 04:07:55] 2025-10-13 02:07:16,828 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 04:07:55] 2025-10-13 02:07:16,828 | INFO     | summary of transferred files:
[2025-10-13 04:07:55] 2025-10-13 02:07:16,828 | INFO     |  -- lfn=log.46676269._077017.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 04:07:55] 2025-10-13 02:07:16,828 | INFO     | stage-out finished correctly
[2025-10-13 04:07:55] 2025-10-13 02:07:16,839 | INFO     | time since job start (5797s) is within the limit (172800.0s)
[2025-10-13 04:07:55] 2025-10-13 02:07:16,906 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 04:07:55] 2025-10-13 02:07:16,977 | INFO     | job 6839870043 has state=finished
[2025-10-13 04:07:55] 2025-10-13 02:07:16,977 | INFO     | preparing for final server update for job 6839870043 in state='finished'
[2025-10-13 04:07:55] 2025-10-13 02:07:16,978 | INFO     | this job has now completed (state=finished)
[2025-10-13 04:07:55] 2025-10-13 02:07:16,978 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 04:07:55] 2025-10-13 02:07:16,978 | INFO     | log transfer has been attempted: DONE
[2025-10-13 04:07:55] 2025-10-13 02:07:16,978 | INFO     | job 6839870043 has finished - writing final server update
[2025-10-13 04:07:55] 2025-10-13 02:07:16,978 | INFO     | total number of processed events: 400 (read)
[2025-10-13 04:07:55] 2025-10-13 02:07:16,980 | INFO     | executing command: lscpu
[2025-10-13 04:07:55] 2025-10-13 02:07:17,016 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 04:07:55] 2025-10-13 02:07:17,038 | INFO     | number of running child processes to parent process 2833206: 1
[2025-10-13 04:07:55] 2025-10-13 02:07:17,039 | INFO     | maximum number of monitored processes: 6
[2025-10-13 04:07:55] 2025-10-13 02:07:18,850 | INFO     | time since job start (5799s) is within the limit (172800.0s)
[2025-10-13 04:07:55] 2025-10-13 02:07:19,541 | INFO     | monitor loop #421: job 0:6839870043 is in state 'finished'
[2025-10-13 04:07:55] 2025-10-13 02:07:19,542 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:07:55] 2025-10-13 02:07:19,784 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 04:07:55] 2025-10-13 02:07:19,785 | INFO     | found 8 cores (4 cores per socket, 2 sockets) HT, CPU MHz: 2281.803625
[2025-10-13 04:07:55] 2025-10-13 02:07:19,787 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6839870043/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:07:55] 2025-10-13 02:07:19,787 | INFO     | extracted standard info from prmon json
[2025-10-13 04:07:55] 2025-10-13 02:07:19,787 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 04:07:55] 2025-10-13 02:07:19,787 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 04:07:55] 2025-10-13 02:07:19,788 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 04:07:55] 2025-10-13 02:07:19,788 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:07:55] 2025-10-13 02:07:19,789 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:07:55] 2025-10-13 02:07:19,790 | INFO     | sum of square deviations: 211285822.0
[2025-10-13 04:07:55] 2025-10-13 02:07:19,790 | INFO     | sum of deviations: -22803206233.0
[2025-10-13 04:07:55] 2025-10-13 02:07:19,790 | INFO     | mean x: 1760318419.5
[2025-10-13 04:07:55] 2025-10-13 02:07:19,791 | INFO     | mean y: 2903003.5454545454
[2025-10-13 04:07:55] 2025-10-13 02:07:19,791 | INFO     | -- intersect: 189986800529.84094
[2025-10-13 04:07:55] 2025-10-13 02:07:19,791 | INFO     | intersect: 189986800529.84094
[2025-10-13 04:07:55] 2025-10-13 02:07:19,791 | INFO     | chi2: 0.13123286797616557
[2025-10-13 04:07:55] 2025-10-13 02:07:19,791 | INFO     | -- intersect: 189986800529.84094
[2025-10-13 04:07:55] 2025-10-13 02:07:19,791 | INFO     | current memory leak: -107.93 B/s (using 88 data points, chi2=0.13)
[2025-10-13 04:07:55] 2025-10-13 02:07:19,792 | INFO     | could have reported an average CPU frequency of 2575 MHz (7 samples)
[2025-10-13 04:07:55] 2025-10-13 02:07:19,792 | INFO     | ..............................
[2025-10-13 04:07:55] 2025-10-13 02:07:19,792 | INFO     | . Timing measurements:
[2025-10-13 04:07:55] 2025-10-13 02:07:19,792 | INFO     | . get job = 0 s
[2025-10-13 04:07:55] 2025-10-13 02:07:19,792 | INFO     | . initial setup = 1 s
[2025-10-13 04:07:55] 2025-10-13 02:07:19,792 | INFO     | . payload setup = 4 s
[2025-10-13 04:07:55] 2025-10-13 02:07:19,792 | INFO     | . stage-in = 0 s
[2025-10-13 04:07:55] 2025-10-13 02:07:19,792 | INFO     | . payload execution = 5773 s
[2025-10-13 04:07:55] 2025-10-13 02:07:19,792 | INFO     | . stage-out = 0 s
[2025-10-13 04:07:55] 2025-10-13 02:07:19,793 | INFO     | . log creation = 0 s
[2025-10-13 04:07:55] 2025-10-13 02:07:19,793 | INFO     | ..............................
[2025-10-13 04:07:55] 2025-10-13 02:07:20,325 | INFO     | 
[2025-10-13 04:07:55] 2025-10-13 02:07:20,325 | INFO     | job summary report
[2025-10-13 04:07:55] 2025-10-13 02:07:20,326 | INFO     | --------------------------------------------------
[2025-10-13 04:07:55] 2025-10-13 02:07:20,326 | INFO     | PanDA job id: 6839870043
[2025-10-13 04:07:55] 2025-10-13 02:07:20,326 | INFO     | task id: 46676269
[2025-10-13 04:07:55] 2025-10-13 02:07:20,326 | INFO     | errors: (none)
[2025-10-13 04:07:55] 2025-10-13 02:07:20,326 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:07:55] 2025-10-13 02:07:20,326 | INFO     | pilot state: finished 
[2025-10-13 04:07:55] 2025-10-13 02:07:20,326 | INFO     | transexitcode: 0
[2025-10-13 04:07:55] 2025-10-13 02:07:20,327 | INFO     | exeerrorcode: 0
[2025-10-13 04:07:55] 2025-10-13 02:07:20,327 | INFO     | exeerrordiag: 
[2025-10-13 04:07:55] 2025-10-13 02:07:20,327 | INFO     | exitcode: 0
[2025-10-13 04:07:55] 2025-10-13 02:07:20,327 | INFO     | exitmsg: OK
[2025-10-13 04:07:55] 2025-10-13 02:07:20,327 | INFO     | cpuconsumptiontime: 64155 s
[2025-10-13 04:07:55] 2025-10-13 02:07:20,327 | INFO     | nevents: 400
[2025-10-13 04:07:55] 2025-10-13 02:07:20,327 | INFO     | neventsw: 0
[2025-10-13 04:07:55] 2025-10-13 02:07:20,327 | INFO     | pid: 2833206
[2025-10-13 04:07:55] 2025-10-13 02:07:20,327 | INFO     | pgrp: 2833206
[2025-10-13 04:07:55] 2025-10-13 02:07:20,327 | INFO     | corecount: 12
[2025-10-13 04:07:55] 2025-10-13 02:07:20,328 | INFO     | event service: False
[2025-10-13 04:07:55] 2025-10-13 02:07:20,328 | INFO     | sizes: {0: 2348862, 1: 2348862, 3: 2349152, 11: 2349180, 5781: 2375967, 5783: 2385163, 5786: 2385301}
[2025-10-13 04:07:55] 2025-10-13 02:07:20,328 | INFO     | --------------------------------------------------
[2025-10-13 04:07:55] 2025-10-13 02:07:20,328 | INFO     | 
[2025-10-13 04:07:55] 2025-10-13 02:07:20,328 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-13 04:07:55] 2025-10-13 02:07:20,344 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:07:55] 2025-10-13 02:07:20,344 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:07:55] 2025-10-13 02:07:20,345 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:07:55] 2025-10-13 02:07:20,345 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:07:55] 2025-10-13 02:07:20,345 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:07:55] 2025-10-13 02:07:20,345 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:07:55] 2025-10-13 02:07:20,345 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:07:55] 2025-10-13 02:07:20,345 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:07:55] 2025-10-13 02:07:20,345 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:07:55] 2025-10-13 02:07:20,345 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:07:55] 2025-10-13 02:07:20,345 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:07:55] 2025-10-13 02:07:20,345 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:07:55] 2025-10-13 02:07:20,346 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:07:55] 2025-10-13 02:07:20,346 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:07:55] 2025-10-13 02:07:20,346 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:07:55] 2025-10-13 02:07:20,346 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:07:55] 2025-10-13 02:07:20,346 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:07:55] 2025-10-13 02:07:20,346 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:07:55] 2025-10-13 02:07:20,346 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:07:55] 2025-10-13 02:07:20,346 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:07:55] 2025-10-13 02:07:20,346 | INFO     | job 6839870043 has completed (purged errors)
[2025-10-13 04:07:55] 2025-10-13 02:07:20,347 | INFO     | overall cleanup function is called
[2025-10-13 04:07:55] 2025-10-13 02:07:21,353 | INFO     | --- collectZombieJob: --- 10, [2833206]
[2025-10-13 04:07:55] 2025-10-13 02:07:21,353 | INFO     | zombie collector waiting for pid 2833206
[2025-10-13 04:07:55] 2025-10-13 02:07:21,354 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:07:55] 2025-10-13 02:07:21,354 | INFO     | collected zombie processes
[2025-10-13 04:07:55] 2025-10-13 02:07:21,354 | INFO     | will attempt to kill all subprocesses of pid=2833206
[2025-10-13 04:07:55] 2025-10-13 02:07:21,434 | INFO     | process IDs to be killed: [2833206] (in reverse order)
[2025-10-13 04:07:55] 2025-10-13 02:07:21,468 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:07:55] 2025-10-13 02:07:21,469 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:07:55] 2025-10-13 02:07:21,471 | INFO     | did not find any defunct processes belonging to 2833206
[2025-10-13 04:07:55] 2025-10-13 02:07:21,474 | INFO     | did not find any defunct processes belonging to 2833206
[2025-10-13 04:07:55] 2025-10-13 02:07:21,474 | INFO     | ready for new job
[2025-10-13 04:07:55] 2025-10-13 02:07:21,474 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:07:55] 2025-10-13 02:07:21,476 | INFO     | ***************************************
[2025-10-13 04:07:55] 2025-10-13 02:07:21,476 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:07:55] 2025-10-13 02:07:21,476 | INFO     | ***************************************
[2025-10-13 04:07:55] 2025-10-13 02:07:21,476 | INFO     | 
[2025-10-13 04:07:55] 2025-10-13 02:07:21,494 | INFO     | architecture information:
[2025-10-13 04:07:55] 2025-10-13 02:07:21,495 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:07:55] 2025-10-13 02:07:21,506 | INFO     | cat /etc/os-release:
[2025-10-13 04:07:55] NAME="CentOS Linux"
[2025-10-13 04:07:55] VERSION="7 (Core)"
[2025-10-13 04:07:55] ID="centos"
[2025-10-13 04:07:55] ID_LIKE="rhel fedora"
[2025-10-13 04:07:55] VERSION_ID="7"
[2025-10-13 04:07:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:07:55] ANSI_COLOR="0;31"
[2025-10-13 04:07:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:07:55] HOME_URL="https://www.centos.org/"
[2025-10-13 04:07:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:07:55] 
[2025-10-13 04:07:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:07:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:07:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:07:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:07:55] 
[2025-10-13 04:07:55] 2025-10-13 02:07:21,506 | INFO     | ***************************************
[2025-10-13 04:07:55] 2025-10-13 02:07:22,009 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-13 04:07:55] 2025-10-13 02:07:22,022 | INFO     | sufficient remaining disk space (33543946240 B)
[2025-10-13 04:07:55] 2025-10-13 02:07:22,022 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:07:55] 2025-10-13 02:07:22,023 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:07:55] 2025-10-13 02:07:22,023 | INFO     | update_server=False
[2025-10-13 04:07:55] 2025-10-13 02:07:22,023 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:07:55] 2025-10-13 02:07:22,045 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 04:07:55] 2025-10-13 02:07:22,045 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 04:07:55] 2025-10-13 02:07:22,045 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:07:55] 2025-10-13 02:07:22,046 | INFO     | will abort loop
[2025-10-13 04:07:55] 2025-10-13 02:07:22,384 | INFO     | all payload control threads have been joined
[2025-10-13 04:07:55] 2025-10-13 02:07:22,413 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:07:55] 2025-10-13 02:07:22,653 | INFO     | all data control threads have been joined
[2025-10-13 04:07:55] 2025-10-13 02:07:22,981 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:07:55] 2025-10-13 02:07:23,025 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:07:55] 2025-10-13 02:07:23,049 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:07:55] 2025-10-13 02:07:23,105 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:07:55] 2025-10-13 02:07:23,129 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:07:55] 2025-10-13 02:07:23,189 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:07:55] 2025-10-13 02:07:23,389 | INFO     | [payload] control thread has finished
[2025-10-13 04:07:55] 2025-10-13 02:07:23,539 | INFO     | all job control threads have been joined
[2025-10-13 04:07:55] 2025-10-13 02:07:23,563 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:07:55] 2025-10-13 02:07:23,657 | INFO     | [data] control thread has finished
[2025-10-13 04:07:55] 2025-10-13 02:07:24,157 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:07:55] 2025-10-13 02:07:24,419 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:07:55] 2025-10-13 02:07:24,519 | INFO     | [job] validate thread has finished
[2025-10-13 04:07:55] 2025-10-13 02:07:24,528 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:07:55] 2025-10-13 02:07:24,528 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:07:55] 2025-10-13 02:07:24,545 | INFO     | [job] control thread has finished
[2025-10-13 04:07:55] 2025-10-13 02:07:24,881 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:07:55] 2025-10-13 02:07:25,885 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:07:55] 2025-10-13 02:07:26,987 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:07:55] 2025-10-13 02:07:48,365 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:07:55] 2025-10-13 02:07:50,305 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140498432804672)>', '<ExcThread(monitor, started 140498127787776)>']
[2025-10-13 04:07:55] 2025-10-13 02:07:52,033 | INFO     | PID=2826624 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:07:55] 2025-10-13 02:07:52,034 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:07:55] 2025-10-13 02:07:52,034 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:07:55] 2025-10-13 02:07:52,034 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:07:55] 2025-10-13 02:07:52,034 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:07:55] 2025-10-13 02:07:52,034 | INFO     | [monitor] control thread has ended
[2025-10-13 04:07:55] 2025-10-13 02:07:55,331 | INFO     | all workflow threads have been joined
[2025-10-13 04:07:55] 2025-10-13 02:07:55,331 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:07:55] 2025-10-13 02:07:55,331 | INFO     | traces error code: 0
[2025-10-13 04:07:55] 2025-10-13 02:07:55,331 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:07:55] 2025-10-13 02:07:55,417 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:07:55] 2025-10-13 02:07:55,419 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:07:55] 2025-10-13 02:07:55,422 [wrapper] pilotpid: 2826624
[2025-10-13 04:07:55] 2025-10-13 02:07:55,424 [wrapper] Pilot exit status: 0
[2025-10-13 04:07:55] 2025-10-13 02:07:55,432 [wrapper] pandaids: 6839870043
[2025-10-13 04:07:55] 2025-10-13 02:07:55,458 [wrapper] cleanup supervisor_pilot 2844957 2826625
[2025-10-13 04:07:55] 2025-10-13 02:07:55,461 [wrapper] Test setup, not cleaning
[2025-10-13 04:07:55] 2025-10-13 02:07:55,463 [wrapper] apfmon messages muted
[2025-10-13 04:07:55] 2025-10-13 02:07:55,465 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:07:55] 2025-10-13 02:07:55,467 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:07:55]  *** Error codes and diagnostics ***
[2025-10-13 04:07:55]     "exeErrorCode": 0,
[2025-10-13 04:07:55]     "exeErrorDiag": "",
[2025-10-13 04:07:55]     "pilotErrorCode": 0,
[2025-10-13 04:07:55]     "pilotErrorDiag": "",
[2025-10-13 04:07:55]  *** Listing of results directory ***
[2025-10-13 04:07:55] total 413440
[2025-10-13 04:07:55] -rw-r--r-- 1 boinc boinc      5112 Okt 12 13:22 queuedata.json
[2025-10-13 04:07:55] -rwx------ 1 boinc boinc     36292 Okt 12 13:23 runpilot2-wrapper.sh
[2025-10-13 04:07:55] -rw-r--r-- 1 boinc boinc    557409 Okt 12 13:23 pilot3.tar.gz
[2025-10-13 04:07:55] -rw-r--r-- 1 boinc boinc       100 Okt 13 02:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:07:55] -rwxr-xr-x 1 boinc boinc      7986 Okt 13 02:30 run_atlas
[2025-10-13 04:07:55] -rw-r--r-- 1 boinc boinc       105 Okt 13 02:30 job.xml
[2025-10-13 04:07:55] -rw-r--r-- 2 boinc boinc     15120 Okt 13 02:30 start_atlas.sh
[2025-10-13 04:07:55] drwxrwx--x 2 boinc boinc      4096 Okt 13 02:30 shared
[2025-10-13 04:07:55] -rw-r--r-- 2 boinc boinc    569676 Okt 13 02:30 input.tar.gz
[2025-10-13 04:07:55] -rw-r--r-- 1 boinc boinc      6048 Okt 13 02:30 init_data.xml
[2025-10-13 04:07:55] -rw-r--r-- 2 boinc boinc 222850112 Okt 13 02:30 EVNT.46676267._003674.pool.root.1
[2025-10-13 04:07:55] -rw-r--r-- 1 boinc boinc         0 Okt 13 02:30 boinc_lockfile
[2025-10-13 04:07:55] -rw-r--r-- 1 boinc boinc      2549 Okt 13 02:30 pandaJob.out
[2025-10-13 04:07:55] -rw------- 1 boinc boinc    975603 Okt 13 02:30 agis_schedconf.cvmfs.json
[2025-10-13 04:07:55] -rw------- 1 boinc boinc   1560580 Okt 13 02:30 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:07:55] drwx------ 5 boinc boinc      4096 Okt 13 02:30 pilot3
[2025-10-13 04:07:55] -rw------- 1 boinc boinc 194169949 Okt 13 04:06 HITS.46676269._077017.pool.root.1
[2025-10-13 04:07:55] -rw-r--r-- 1 boinc boinc       529 Okt 13 04:07 boinc_task_state.xml
[2025-10-13 04:07:55] -rw------- 1 boinc boinc      1065 Okt 13 04:07 memory_monitor_summary.json
[2025-10-13 04:07:55] -rw------- 1 boinc boinc    393040 Okt 13 04:07 log.46676269._077017.job.log.tgz.1
[2025-10-13 04:07:55] -rw------- 1 boinc boinc      7848 Okt 13 04:07 heartbeat.json
[2025-10-13 04:07:55] -rw-r--r-- 1 boinc boinc      8192 Okt 13 04:07 boinc_mmap_file
[2025-10-13 04:07:55] -rw-r--r-- 1 boinc boinc        27 Okt 13 04:07 wrapper_checkpoint.txt
[2025-10-13 04:07:55] -rw------- 1 boinc boinc        95 Okt 13 04:07 pilot_heartbeat.json
[2025-10-13 04:07:55] -rw------- 1 boinc boinc      4941 Okt 13 04:07 pilotlog.txt
[2025-10-13 04:07:55] -rw------- 1 boinc boinc    824235 Okt 13 04:07 log.46676269._077017.job.log.1
[2025-10-13 04:07:55] -rw------- 1 boinc boinc       357 Okt 13 04:07 output.list
[2025-10-13 04:07:55] -rw-r--r-- 1 boinc boinc       620 Okt 13 04:07 runtime_log
[2025-10-13 04:07:55] -rw------- 1 boinc boinc   1239040 Okt 13 04:07 result.tar.gz
[2025-10-13 04:07:55] -rw-r--r-- 1 boinc boinc      8760 Okt 13 04:07 runtime_log.err
[2025-10-13 04:07:55] -rw------- 1 boinc boinc       653 Okt 13 04:07 RtONDm5L9R8n9Rq4apOajLDm4fhM0noT9bVof3QYDm5jTMDmX3Uf6m.diag
[2025-10-13 04:07:55] -rw-r--r-- 1 boinc boinc     21393 Okt 13 04:07 stderr.txt
[2025-10-13 04:07:55] HITS file was successfully produced:
[2025-10-13 04:07:55] -rw------- 1 boinc boinc 194169949 Okt 13 04:06 shared/HITS.pool.root.1
[2025-10-13 04:07:55]  *** Contents of shared directory: ***
[2025-10-13 04:07:55] total 409044
[2025-10-13 04:07:55] -rw-r--r-- 2 boinc boinc     15120 Okt 13 02:30 start_atlas.sh
[2025-10-13 04:07:55] -rw-r--r-- 2 boinc boinc    569676 Okt 13 02:30 input.tar.gz
[2025-10-13 04:07:55] -rw-r--r-- 2 boinc boinc 222850112 Okt 13 02:30 ATLAS.root_0
[2025-10-13 04:07:55] -rw------- 1 boinc boinc 194169949 Okt 13 04:06 HITS.pool.root.1
[2025-10-13 04:07:55] -rw------- 1 boinc boinc   1239040 Okt 13 04:07 result.tar.gz
04:07:56 (2822803): run_atlas exited; CPU time 63901.451425
04:07:56 (2822803): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN