Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
12:06:31 (3851446): wrapper (7.7.26015): starting
12:06:31 (3851446): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 12:06:31] Arguments: --nthreads 4
[2025-10-12 12:06:31] Threads: 4
[2025-10-12 12:06:31] Checking for CVMFS
[2025-10-12 12:06:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 12:06:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 12:06:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 12:06:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 12:06:31] 2.12.7.0 2326568 4778 63224 151631 2 62 3706589 4096001 917 130560 0 6417218 99.985 162892 419 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-12 12:06:31] CVMFS is ok
[2025-10-12 12:06:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 12:06:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 12:06:31] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-12 12:06:31] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-12 12:06:31] Further information can be found at the LHC@home message board.
[2025-10-12 12:06:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 12:06:31] Checking for apptainer binary...
[2025-10-12 12:06:31] apptainer is not installed, using version from CVMFS
[2025-10-12 12:06:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 12:06:32] X570UD
[2025-10-12 12:06:32] apptainer works
[2025-10-12 12:06:32] Set ATHENA_PROC_NUMBER=4
[2025-10-12 12:06:32] Set ATHENA_CORE_NUMBER=4
[2025-10-12 12:06:32] Starting ATLAS job with PandaID=6839870089
[2025-10-12 12:06:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc3/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 13:51:03]  *** The last 200 lines of the pilot log: ***
[2025-10-12 13:51:03] 2025-10-12 19:50:04,132 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 13:51:03] 2025-10-12 19:50:04,466 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 13:51:03] 2025-10-12 19:50:04,469 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4122.6208125
[2025-10-12 13:51:03] 2025-10-12 19:50:04,471 | INFO     | using path: /var/lib/boinc3/slots/1/PanDA_Pilot-6839870089/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 13:51:03] 2025-10-12 19:50:04,472 | INFO     | extracted standard info from prmon json
[2025-10-12 13:51:03] 2025-10-12 19:50:04,472 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 13:51:03] 2025-10-12 19:50:04,472 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 13:51:03] 2025-10-12 19:50:04,472 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 13:51:03] 2025-10-12 19:50:04,472 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 13:51:03] 2025-10-12 19:50:04,473 | INFO     | fitting pss+swap vs Time
[2025-10-12 13:51:03] 2025-10-12 19:50:04,473 | INFO     | sum of square deviations: 319447850.0
[2025-10-12 13:51:03] 2025-10-12 19:50:04,474 | INFO     | sum of deviations: -11142488323.0
[2025-10-12 13:51:03] 2025-10-12 19:50:04,474 | INFO     | mean x: 1760295484.0
[2025-10-12 13:51:03] 2025-10-12 19:50:04,474 | INFO     | mean y: 2418561.801980198
[2025-10-12 13:51:03] 2025-10-12 19:50:04,474 | INFO     | -- intersect: 61402336812.93322
[2025-10-12 13:51:03] 2025-10-12 19:50:04,474 | INFO     | intersect: 61402336812.93322
[2025-10-12 13:51:03] 2025-10-12 19:50:04,474 | INFO     | chi2: 1.5431644590031566
[2025-10-12 13:51:03] 2025-10-12 19:50:04,474 | INFO     | sum of square deviations: 274312120.0
[2025-10-12 13:51:03] 2025-10-12 19:50:04,474 | INFO     | sum of deviations: -9979051305.0
[2025-10-12 13:51:03] 2025-10-12 19:50:04,474 | INFO     | mean x: 1760295331.5
[2025-10-12 13:51:03] 2025-10-12 19:50:04,474 | INFO     | mean y: 2422481.5
[2025-10-12 13:51:03] 2025-10-12 19:50:04,474 | INFO     | -- intersect: 64039248214.86709
[2025-10-12 13:51:03] 2025-10-12 19:50:04,475 | INFO     | intersect: 64039248214.86709
[2025-10-12 13:51:03] 2025-10-12 19:50:04,475 | INFO     | chi2: 1.5390334147570324
[2025-10-12 13:51:03] 2025-10-12 19:50:04,475 | INFO     | current chi2=1.5390334147570324 (change=0.26769954569798415 %)
[2025-10-12 13:51:03] 2025-10-12 19:50:04,475 | INFO     | right removable region: 95
[2025-10-12 13:51:03] 2025-10-12 19:50:04,475 | INFO     | sum of square deviations: 274312120.0
[2025-10-12 13:51:03] 2025-10-12 19:50:04,475 | INFO     | sum of deviations: -21832557488.499996
[2025-10-12 13:51:03] 2025-10-12 19:50:04,475 | INFO     | mean x: 1760295636.5
[2025-10-12 13:51:03] 2025-10-12 19:50:04,475 | INFO     | mean y: 2453337.3645833335
[2025-10-12 13:51:03] 2025-10-12 19:50:04,475 | INFO     | -- intersect: 140104741492.33908
[2025-10-12 13:51:03] 2025-10-12 19:50:04,475 | INFO     | intersect: 140104741492.33908
[2025-10-12 13:51:03] 2025-10-12 19:50:04,475 | INFO     | chi2: 0.1542817635382827
[2025-10-12 13:51:03] 2025-10-12 19:50:04,475 | INFO     | current chi2=0.1542817635382827 (change=90.00224748320443 %)
[2025-10-12 13:51:03] 2025-10-12 19:50:04,476 | INFO     | sum of square deviations: 233641590.0
[2025-10-12 13:51:03] 2025-10-12 19:50:04,476 | INFO     | sum of deviations: -18697467948.0
[2025-10-12 13:51:03] 2025-10-12 19:50:04,476 | INFO     | mean x: 1760295789.0
[2025-10-12 13:51:03] 2025-10-12 19:50:04,476 | INFO     | mean y: 2441555.6373626376
[2025-10-12 13:51:03] 2025-10-12 19:50:04,476 | INFO     | -- intersect: 140872370123.6927
[2025-10-12 13:51:03] 2025-10-12 19:50:04,476 | INFO     | intersect: 140872370123.6927
[2025-10-12 13:51:03] 2025-10-12 19:50:04,476 | INFO     | chi2: 0.15411882282395942
[2025-10-12 13:51:03] 2025-10-12 19:50:04,476 | INFO     | current chi2=0.15411882282395942 (change=0.1056124266319162 %)
[2025-10-12 13:51:03] 2025-10-12 19:50:04,476 | INFO     | left removable region: 20
[2025-10-12 13:51:03] 2025-10-12 19:50:04,476 | INFO     | sum of square deviations: 130793150.0
[2025-10-12 13:51:03] 2025-10-12 19:50:04,476 | INFO     | sum of deviations: -10897472002.0
[2025-10-12 13:51:03] 2025-10-12 19:50:04,476 | INFO     | mean x: 1760295911.0
[2025-10-12 13:51:03] 2025-10-12 19:50:04,477 | INFO     | mean y: 2417055.946666667
[2025-10-12 13:51:03] 2025-10-12 19:50:04,477 | INFO     | -- intersect: 146667402228.011
[2025-10-12 13:51:03] 2025-10-12 19:50:04,477 | INFO     | intersect: 146667402228.011
[2025-10-12 13:51:03] 2025-10-12 19:50:04,477 | INFO     | chi2: 0.13555135362342605
[2025-10-12 13:51:03] 2025-10-12 19:50:04,477 | INFO     | -- intersect: 146667402228.011
[2025-10-12 13:51:03] 2025-10-12 19:50:04,477 | INFO     | current memory leak: -83.32 B/s (using 75 data points, chi2=0.14)
[2025-10-12 13:51:03] 2025-10-12 19:50:04,477 | INFO     | could have reported an average CPU frequency of 4210 MHz (7 samples)
[2025-10-12 13:51:03] 2025-10-12 19:50:04,477 | INFO     | ..............................
[2025-10-12 13:51:03] 2025-10-12 19:50:04,477 | INFO     | . Timing measurements:
[2025-10-12 13:51:03] 2025-10-12 19:50:04,477 | INFO     | . get job = 0 s
[2025-10-12 13:51:03] 2025-10-12 19:50:04,477 | INFO     | . initial setup = 4 s
[2025-10-12 13:51:03] 2025-10-12 19:50:04,477 | INFO     | . payload setup = 7 s
[2025-10-12 13:51:03] 2025-10-12 19:50:04,477 | INFO     | . stage-in = 0 s
[2025-10-12 13:51:03] 2025-10-12 19:50:04,477 | INFO     | . payload execution = 6160 s
[2025-10-12 13:51:03] 2025-10-12 19:50:04,477 | INFO     | . stage-out = 0 s
[2025-10-12 13:51:03] 2025-10-12 19:50:04,477 | INFO     | . log creation = 0 s
[2025-10-12 13:51:03] 2025-10-12 19:50:04,477 | INFO     | ..............................
[2025-10-12 13:51:03] 2025-10-12 19:50:04,528 | INFO     | 
[2025-10-12 13:51:03] 2025-10-12 19:50:04,528 | INFO     | job summary report
[2025-10-12 13:51:03] 2025-10-12 19:50:04,528 | INFO     | --------------------------------------------------
[2025-10-12 13:51:03] 2025-10-12 19:50:04,528 | INFO     | PanDA job id: 6839870089
[2025-10-12 13:51:03] 2025-10-12 19:50:04,528 | INFO     | task id: 46676269
[2025-10-12 13:51:03] 2025-10-12 19:50:04,528 | INFO     | errors: (none)
[2025-10-12 13:51:03] 2025-10-12 19:50:04,528 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 13:51:03] 2025-10-12 19:50:04,528 | INFO     | pilot state: finished 
[2025-10-12 13:51:03] 2025-10-12 19:50:04,528 | INFO     | transexitcode: 0
[2025-10-12 13:51:03] 2025-10-12 19:50:04,529 | INFO     | exeerrorcode: 0
[2025-10-12 13:51:03] 2025-10-12 19:50:04,529 | INFO     | exeerrordiag: 
[2025-10-12 13:51:03] 2025-10-12 19:50:04,529 | INFO     | exitcode: 0
[2025-10-12 13:51:03] 2025-10-12 19:50:04,529 | INFO     | exitmsg: OK
[2025-10-12 13:51:03] 2025-10-12 19:50:04,529 | INFO     | cpuconsumptiontime: 23908 s
[2025-10-12 13:51:03] 2025-10-12 19:50:04,529 | INFO     | nevents: 400
[2025-10-12 13:51:03] 2025-10-12 19:50:04,529 | INFO     | neventsw: 0
[2025-10-12 13:51:03] 2025-10-12 19:50:04,529 | INFO     | pid: 3862377
[2025-10-12 13:51:03] 2025-10-12 19:50:04,529 | INFO     | pgrp: 3862377
[2025-10-12 13:51:03] 2025-10-12 19:50:04,529 | INFO     | corecount: 4
[2025-10-12 13:51:03] 2025-10-12 19:50:04,529 | INFO     | event service: False
[2025-10-12 13:51:03] 2025-10-12 19:50:04,529 | INFO     | sizes: {0: 2348858, 5: 2349120, 11: 2349176, 6171: 2376161, 6172: 2376160, 6173: 2385216, 6175: 2385400, 6182: 2385594}
[2025-10-12 13:51:03] 2025-10-12 19:50:04,529 | INFO     | --------------------------------------------------
[2025-10-12 13:51:03] 2025-10-12 19:50:04,529 | INFO     | 
[2025-10-12 13:51:03] 2025-10-12 19:50:04,529 | INFO     | executing command: ls -lF /var/lib/boinc3/slots/1
[2025-10-12 13:51:03] 2025-10-12 19:50:04,582 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 13:51:03] 2025-10-12 19:50:04,582 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 13:51:03] 2025-10-12 19:50:04,582 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 13:51:03] 2025-10-12 19:50:04,582 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 13:51:03] 2025-10-12 19:50:04,582 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 13:51:03] 2025-10-12 19:50:04,582 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 13:51:03] 2025-10-12 19:50:04,582 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 13:51:03] 2025-10-12 19:50:04,582 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 13:51:03] 2025-10-12 19:50:04,582 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 13:51:03] 2025-10-12 19:50:04,582 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 13:51:03] 2025-10-12 19:50:04,582 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 13:51:03] 2025-10-12 19:50:04,582 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 13:51:03] 2025-10-12 19:50:04,582 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 13:51:03] 2025-10-12 19:50:04,582 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 13:51:03] 2025-10-12 19:50:04,582 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 13:51:03] 2025-10-12 19:50:04,582 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 13:51:03] 2025-10-12 19:50:04,583 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 13:51:03] 2025-10-12 19:50:04,583 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 13:51:03] 2025-10-12 19:50:04,583 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 13:51:03] 2025-10-12 19:50:04,583 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 13:51:03] 2025-10-12 19:50:04,583 | INFO     | job 6839870089 has completed (purged errors)
[2025-10-12 13:51:03] 2025-10-12 19:50:04,583 | INFO     | overall cleanup function is called
[2025-10-12 13:51:03] 2025-10-12 19:50:05,589 | INFO     | --- collectZombieJob: --- 10, [3862377]
[2025-10-12 13:51:03] 2025-10-12 19:50:05,589 | INFO     | zombie collector waiting for pid 3862377
[2025-10-12 13:51:03] 2025-10-12 19:50:05,589 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 13:51:03] 2025-10-12 19:50:05,589 | INFO     | collected zombie processes
[2025-10-12 13:51:03] 2025-10-12 19:50:05,589 | INFO     | will attempt to kill all subprocesses of pid=3862377
[2025-10-12 13:51:03] 2025-10-12 19:50:05,664 | INFO     | process IDs to be killed: [3862377] (in reverse order)
[2025-10-12 13:51:03] 2025-10-12 19:50:05,802 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 13:51:03] 2025-10-12 19:50:05,802 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 13:51:03] 2025-10-12 19:50:05,805 | INFO     | did not find any defunct processes belonging to 3862377
[2025-10-12 13:51:03] 2025-10-12 19:50:05,808 | INFO     | did not find any defunct processes belonging to 3862377
[2025-10-12 13:51:03] 2025-10-12 19:50:05,808 | INFO     | ready for new job
[2025-10-12 13:51:03] 2025-10-12 19:50:05,809 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 13:51:03] 2025-10-12 19:50:05,810 | INFO     | ***************************************
[2025-10-12 13:51:03] 2025-10-12 19:50:05,810 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 13:51:03] 2025-10-12 19:50:05,810 | INFO     | ***************************************
[2025-10-12 13:51:03] 2025-10-12 19:50:05,810 | INFO     | 
[2025-10-12 13:51:03] 2025-10-12 19:50:05,811 | INFO     | architecture information:
[2025-10-12 13:51:03] 2025-10-12 19:50:05,811 | INFO     | executing command: cat /etc/os-release
[2025-10-12 13:51:03] 2025-10-12 19:50:05,839 | INFO     | cat /etc/os-release:
[2025-10-12 13:51:03] NAME="CentOS Linux"
[2025-10-12 13:51:03] VERSION="7 (Core)"
[2025-10-12 13:51:03] ID="centos"
[2025-10-12 13:51:03] ID_LIKE="rhel fedora"
[2025-10-12 13:51:03] VERSION_ID="7"
[2025-10-12 13:51:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 13:51:03] ANSI_COLOR="0;31"
[2025-10-12 13:51:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 13:51:03] HOME_URL="https://www.centos.org/"
[2025-10-12 13:51:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 13:51:03] 
[2025-10-12 13:51:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 13:51:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 13:51:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 13:51:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 13:51:03] 
[2025-10-12 13:51:03] 2025-10-12 19:50:05,839 | INFO     | ***************************************
[2025-10-12 13:51:03] 2025-10-12 19:50:06,342 | INFO     | executing command: df -mP /var/lib/boinc3/slots/1
[2025-10-12 13:51:03] 2025-10-12 19:50:06,372 | INFO     | sufficient remaining disk space (252711010304 B)
[2025-10-12 13:51:03] 2025-10-12 19:50:06,372 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 13:51:03] 2025-10-12 19:50:06,372 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 13:51:03] 2025-10-12 19:50:06,372 | INFO     | update_server=False
[2025-10-12 13:51:03] 2025-10-12 19:50:06,372 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 13:51:03] 2025-10-12 19:50:06,375 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:51:03] 2025-10-12 19:50:06,495 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 13:51:03] 2025-10-12 19:50:06,635 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 13:51:03] 2025-10-12 19:50:06,635 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 13:51:03] 2025-10-12 19:50:06,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 13:51:03] 2025-10-12 19:50:06,635 | INFO     | will abort loop
[2025-10-12 13:51:03] 2025-10-12 19:50:07,274 | INFO     | all data control threads have been joined
[2025-10-12 13:51:03] 2025-10-12 19:50:07,377 | INFO     | [job] retrieve thread has finished
[2025-10-12 13:51:03] 2025-10-12 19:50:07,380 | INFO     | [job] queue monitor thread has finished
[2025-10-12 13:51:03] 2025-10-12 19:50:07,388 | INFO     | [payload] failed_post thread has finished
[2025-10-12 13:51:03] 2025-10-12 19:50:07,415 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 13:51:03] 2025-10-12 19:50:07,640 | INFO     | [job] job monitor thread has finished
[2025-10-12 13:51:03] 2025-10-12 19:50:07,722 | INFO     | all payload control threads have been joined
[2025-10-12 13:51:03] 2025-10-12 19:50:07,873 | INFO     | all job control threads have been joined
[2025-10-12 13:51:03] 2025-10-12 19:50:08,145 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 13:51:03] 2025-10-12 19:50:08,190 | INFO     | [payload] validate_post thread has finished
[2025-10-12 13:51:03] 2025-10-12 19:50:08,224 | INFO     | [job] validate thread has finished
[2025-10-12 13:51:03] 2025-10-12 19:50:08,279 | INFO     | [data] control thread has finished
[2025-10-12 13:51:03] 2025-10-12 19:50:08,380 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 13:51:03] 2025-10-12 19:50:08,403 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 13:51:03] 2025-10-12 19:50:08,500 | INFO     | [data] copytool_out thread has finished
[2025-10-12 13:51:03] 2025-10-12 19:50:08,703 | INFO     | [data] copytool_in thread has finished
[2025-10-12 13:51:03] 2025-10-12 19:50:08,727 | INFO     | [payload] control thread has finished
[2025-10-12 13:51:03] 2025-10-12 19:50:08,817 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 13:51:03] 2025-10-12 19:50:08,878 | INFO     | [job] control thread has finished
[2025-10-12 13:51:03] 2025-10-12 19:50:12,408 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 13:51:03] 2025-10-12 19:50:36,560 | INFO     | PID=3855398 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 13:51:03] 2025-10-12 19:50:36,560 | INFO     | .. there are 2 such processes running
[2025-10-12 13:51:03] 2025-10-12 19:50:36,560 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 13:51:03] 2025-10-12 19:50:36,560 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 13:51:03] 2025-10-12 19:50:36,561 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 13:51:03] 2025-10-12 19:50:57,222 | INFO     | [monitor] cgroup control has ended
[2025-10-12 13:51:03] 2025-10-12 19:50:58,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134211915429696)>', '<ExcThread(monitor, started 134211151329024)>']
[2025-10-12 13:51:03] 2025-10-12 19:50:58,670 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 13:51:03] 2025-10-12 19:50:58,670 | INFO     | [monitor] control thread has ended
[2025-10-12 13:51:03] 2025-10-12 19:51:03,036 | INFO     | all workflow threads have been joined
[2025-10-12 13:51:03] 2025-10-12 19:51:03,036 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 13:51:03] 2025-10-12 19:51:03,036 | INFO     | traces error code: 0
[2025-10-12 13:51:03] 2025-10-12 19:51:03,036 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 13:51:03] 2025-10-12 19:51:03,122 [wrapper] ==== pilot stdout END ====
[2025-10-12 13:51:03] 2025-10-12 19:51:03,132 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 13:51:03] 2025-10-12 19:51:03,135 [wrapper] pilotpid: 3855398
[2025-10-12 13:51:03] 2025-10-12 19:51:03,139 [wrapper] Pilot exit status: 0
[2025-10-12 13:51:03] 2025-10-12 19:51:03,153 [wrapper] pandaids: 6839870089
[2025-10-12 13:51:03] 2025-10-12 19:51:03,190 [wrapper] cleanup supervisor_pilot 3942722 3855399
[2025-10-12 13:51:03] 2025-10-12 19:51:03,194 [wrapper] Test setup, not cleaning
[2025-10-12 13:51:03] 2025-10-12 19:51:03,201 [wrapper] apfmon messages muted
[2025-10-12 13:51:03] 2025-10-12 19:51:03,206 [wrapper] ==== wrapper stdout END ====
[2025-10-12 13:51:03] 2025-10-12 19:51:03,210 [wrapper] ==== wrapper stderr END ====
[2025-10-12 13:51:03]  *** Error codes and diagnostics ***
[2025-10-12 13:51:03]     "exeErrorCode": 0,
[2025-10-12 13:51:03]     "exeErrorDiag": "",
[2025-10-12 13:51:03]     "pilotErrorCode": 0,
[2025-10-12 13:51:03]     "pilotErrorDiag": "",
[2025-10-12 13:51:03]  *** Listing of results directory ***
[2025-10-12 13:51:03] total 409256
[2025-10-12 13:51:03] -rwx------ 1 boinc boinc     36292 Oct 12 05:23 runpilot2-wrapper.sh
[2025-10-12 13:51:03] -rw-r--r-- 1 boinc boinc    557409 Oct 12 05:23 pilot3.tar.gz
[2025-10-12 13:51:03] -rw-r--r-- 1 boinc boinc      5112 Oct 12 05:23 queuedata.json
[2025-10-12 13:51:03] -rw-rw-r-- 1 boinc boinc       100 Oct 12 12:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 13:51:03] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 12:06 run_atlas
[2025-10-12 13:51:03] -rw-rw-r-- 1 boinc boinc       105 Oct 12 12:06 job.xml
[2025-10-12 13:51:03] -rw-rw-r-- 1 boinc boinc      9738 Oct 12 12:06 init_data.xml
[2025-10-12 13:51:03] -rw-r--r-- 2 boinc boinc 219569012 Oct 12 12:06 EVNT.46676267._003675.pool.root.1
[2025-10-12 13:51:03] -rw-r--r-- 2 boinc boinc    569678 Oct 12 12:06 input.tar.gz
[2025-10-12 13:51:03] -rw-r--r-- 2 boinc boinc     15120 Oct 12 12:06 start_atlas.sh
[2025-10-12 13:51:03] drwxrwx--x 2 boinc boinc      4096 Oct 12 12:06 shared
[2025-10-12 13:51:03] -rw-rw-r-- 1 boinc boinc         0 Oct 12 12:06 boinc_lockfile
[2025-10-12 13:51:03] -rw-rw-r-- 1 boinc boinc      2550 Oct 12 12:06 pandaJob.out
[2025-10-12 13:51:03] -rw------- 1 boinc boinc    975528 Oct 12 12:06 agis_schedconf.cvmfs.json
[2025-10-12 13:51:03] -rw------- 1 boinc boinc   1560580 Oct 12 12:06 agis_ddmendpoints.agis.ALL.json
[2025-10-12 13:51:03] drwx------ 5 boinc boinc      4096 Oct 12 12:06 pilot3
[2025-10-12 13:51:03] -rw------- 1 boinc boinc 193158760 Oct 12 13:49 HITS.46676269._077063.pool.root.1
[2025-10-12 13:51:03] -rw-rw-r-- 1 boinc boinc       529 Oct 12 13:49 boinc_task_state.xml
[2025-10-12 13:51:03] -rw------- 1 boinc boinc        95 Oct 12 13:49 pilot_heartbeat.json
[2025-10-12 13:51:03] -rw------- 1 boinc boinc      1027 Oct 12 13:49 memory_monitor_summary.json
[2025-10-12 13:51:03] -rw------- 1 boinc boinc    303969 Oct 12 13:49 log.46676269._077063.job.log.tgz.1
[2025-10-12 13:51:03] -rw------- 1 boinc boinc      7756 Oct 12 13:50 heartbeat.json
[2025-10-12 13:51:03] -rw-rw-r-- 1 boinc boinc      8192 Oct 12 13:50 boinc_mmap_file
[2025-10-12 13:51:03] -rw-rw-r-- 1 boinc boinc        27 Oct 12 13:50 wrapper_checkpoint.txt
[2025-10-12 13:51:03] -rw------- 1 boinc boinc      5011 Oct 12 13:51 pilotlog.txt
[2025-10-12 13:51:03] -rw------- 1 boinc boinc    916273 Oct 12 13:51 log.46676269._077063.job.log.1
[2025-10-12 13:51:03] -rw------- 1 boinc boinc       357 Oct 12 13:51 output.list
[2025-10-12 13:51:03] -rw-rw-r-- 1 boinc boinc       620 Oct 12 13:51 runtime_log
[2025-10-12 13:51:03] -rw------- 1 boinc boinc   1239040 Oct 12 13:51 result.tar.gz
[2025-10-12 13:51:03] -rw------- 1 boinc boinc       657 Oct 12 13:51 U7OODm5L9R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmakTMDmwBJe5n.diag
[2025-10-12 13:51:03] -rw-rw-r-- 1 boinc boinc      8699 Oct 12 13:51 runtime_log.err
[2025-10-12 13:51:03] -rw-rw-r-- 1 boinc boinc     21288 Oct 12 13:51 stderr.txt
[2025-10-12 13:51:03] HITS file was successfully produced:
[2025-10-12 13:51:03] -rw------- 1 boinc boinc 193158760 Oct 12 13:49 shared/HITS.pool.root.1
[2025-10-12 13:51:03]  *** Contents of shared directory: ***
[2025-10-12 13:51:03] total 404852
[2025-10-12 13:51:03] -rw-r--r-- 2 boinc boinc 219569012 Oct 12 12:06 ATLAS.root_0
[2025-10-12 13:51:03] -rw-r--r-- 2 boinc boinc    569678 Oct 12 12:06 input.tar.gz
[2025-10-12 13:51:03] -rw-r--r-- 2 boinc boinc     15120 Oct 12 12:06 start_atlas.sh
[2025-10-12 13:51:03] -rw------- 1 boinc boinc 193158760 Oct 12 13:49 HITS.pool.root.1
[2025-10-12 13:51:03] -rw------- 1 boinc boinc   1239040 Oct 12 13:51 result.tar.gz
13:51:04 (3851446): run_atlas exited; CPU time 23944.584101
13:51:04 (3851446): called boinc_finish(0)

</stderr_txt>
]]>

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