Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
18:10:18 (2688119): wrapper (7.7.26015): starting
18:10:18 (2688119): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 18:10:18] Arguments: --nthreads 12
[2025-10-12 18:10:18] Threads: 12
[2025-10-12 18:10:18] Checking for CVMFS
[2025-10-12 18:10:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 18:10:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 18:10:18] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 18:10:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 18:10:19] 2.12.7.0 2633540 196 49340 151625 2 57 3288998 4096000 0 130560 0 146490 99.978 10789 59 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 18:10:19] CVMFS is ok
[2025-10-12 18:10:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 18:10:19] Checking for apptainer binary...
[2025-10-12 18:10:19] apptainer is not installed, using version from CVMFS
[2025-10-12 18:10:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 18:10:19] lithium
[2025-10-12 18:10:19] apptainer works
[2025-10-12 18:10:19] Set ATHENA_PROC_NUMBER=12
[2025-10-12 18:10:19] Set ATHENA_CORE_NUMBER=12
[2025-10-12 18:10:19] Starting ATLAS job with PandaID=6839661044
[2025-10-12 18:10:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 19:48:50]  *** The last 200 lines of the pilot log: ***
[2025-10-12 19:48:50]  protocol_id=None
[2025-10-12 19:48:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-12 19:48:50]  replicas=None
[2025-10-12 19:48:50]  scope=mc23_13p6TeV
[2025-10-12 19:48:50]  status=None
[2025-10-12 19:48:50]  status_code=0
[2025-10-12 19:48:50]  storage_token=
[2025-10-12 19:48:50]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6839661044/log.46676269._074182.job.log.tgz.1
[2025-10-12 19:48:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/97/log.46676269._074182.job.log.tgz.1
[2025-10-12 19:48:50]  workdir=None
[2025-10-12 19:48:50] ]
[2025-10-12 19:48:50] 2025-10-12 17:48:13,167 | INFO     | transferring file log.46676269._074182.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6839661044/log.46676269._074182.job.log.tgz.1 to /var/lib/boinc
[2025-10-12 19:48:50] 2025-10-12 17:48:13,167 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6839661044/log.46676269._074182.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.466762
[2025-10-12 19:48:50] 2025-10-12 17:48:13,181 | INFO     | adding to output.list: log.46676269._074182.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/97/log.46676269._074182.job.log.tg
[2025-10-12 19:48:50] 2025-10-12 17:48:13,182 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 19:48:50] 2025-10-12 17:48:13,182 | INFO     | summary of transferred files:
[2025-10-12 19:48:50] 2025-10-12 17:48:13,182 | INFO     |  -- lfn=log.46676269._074182.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 19:48:50] 2025-10-12 17:48:13,182 | INFO     | stage-out finished correctly
[2025-10-12 19:48:50] 2025-10-12 17:48:13,384 | INFO     | time since job start (5863s) is within the limit (172800.0s)
[2025-10-12 19:48:50] 2025-10-12 17:48:14,071 | INFO     | monitor loop #429: job 0:6839661044 is in state 'finished'
[2025-10-12 19:48:50] 2025-10-12 17:48:14,072 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:48:50] 2025-10-12 17:48:14,750 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 19:48:50] 2025-10-12 17:48:15,281 | INFO     | job 6839661044 has state=finished
[2025-10-12 19:48:50] 2025-10-12 17:48:15,282 | INFO     | preparing for final server update for job 6839661044 in state='finished'
[2025-10-12 19:48:50] 2025-10-12 17:48:15,282 | INFO     | this job has now completed (state=finished)
[2025-10-12 19:48:50] 2025-10-12 17:48:15,282 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 19:48:50] 2025-10-12 17:48:15,282 | INFO     | log transfer has been attempted: DONE
[2025-10-12 19:48:50] 2025-10-12 17:48:15,282 | INFO     | job 6839661044 has finished - writing final server update
[2025-10-12 19:48:50] 2025-10-12 17:48:15,283 | INFO     | total number of processed events: 400 (read)
[2025-10-12 19:48:50] 2025-10-12 17:48:15,287 | INFO     | executing command: lscpu
[2025-10-12 19:48:50] 2025-10-12 17:48:15,328 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 19:48:50] 2025-10-12 17:48:15,390 | INFO     | time since job start (5865s) is within the limit (172800.0s)
[2025-10-12 19:48:50] 2025-10-12 17:48:16,573 | INFO     | monitor loop #430: job 0:6839661044 is in state 'finished'
[2025-10-12 19:48:50] 2025-10-12 17:48:16,574 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 19:48:50] 2025-10-12 17:48:17,394 | INFO     | time since job start (5867s) is within the limit (172800.0s)
[2025-10-12 19:48:50] 2025-10-12 17:48:18,205 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-12 19:48:50] 2025-10-12 17:48:18,206 | INFO     | found 8 cores (4 cores per socket, 2 sockets) HT, CPU MHz: 2453.877125
[2025-10-12 19:48:50] 2025-10-12 17:48:18,208 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6839661044/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 19:48:50] 2025-10-12 17:48:18,209 | INFO     | extracted standard info from prmon json
[2025-10-12 19:48:50] 2025-10-12 17:48:18,209 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 19:48:50] 2025-10-12 17:48:18,210 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 19:48:50] 2025-10-12 17:48:18,210 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 19:48:50] 2025-10-12 17:48:18,210 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 19:48:50] 2025-10-12 17:48:18,212 | INFO     | fitting pss+swap vs Time
[2025-10-12 19:48:50] 2025-10-12 17:48:18,212 | INFO     | sum of square deviations: 218571540.0
[2025-10-12 19:48:50] 2025-10-12 17:48:18,212 | INFO     | sum of deviations: -10492739442.000002
[2025-10-12 19:48:50] 2025-10-12 17:48:18,213 | INFO     | mean x: 1760288442.0
[2025-10-12 19:48:50] 2025-10-12 17:48:18,213 | INFO     | mean y: 2774967.9101123596
[2025-10-12 19:48:50] 2025-10-12 17:48:18,213 | INFO     | -- intersect: 84507134339.99548
[2025-10-12 19:48:50] 2025-10-12 17:48:18,213 | INFO     | intersect: 84507134339.99548
[2025-10-12 19:48:50] 2025-10-12 17:48:18,213 | INFO     | chi2: 0.175485736180993
[2025-10-12 19:48:50] 2025-10-12 17:48:18,213 | INFO     | -- intersect: 84507134339.99548
[2025-10-12 19:48:50] 2025-10-12 17:48:18,213 | INFO     | current memory leak: -48.01 B/s (using 89 data points, chi2=0.18)
[2025-10-12 19:48:50] 2025-10-12 17:48:18,214 | INFO     | could have reported an average CPU frequency of 2624 MHz (7 samples)
[2025-10-12 19:48:50] 2025-10-12 17:48:18,214 | INFO     | ..............................
[2025-10-12 19:48:50] 2025-10-12 17:48:18,214 | INFO     | . Timing measurements:
[2025-10-12 19:48:50] 2025-10-12 17:48:18,214 | INFO     | . get job = 0 s
[2025-10-12 19:48:50] 2025-10-12 17:48:18,214 | INFO     | . initial setup = 1 s
[2025-10-12 19:48:50] 2025-10-12 17:48:18,214 | INFO     | . payload setup = 4 s
[2025-10-12 19:48:50] 2025-10-12 17:48:18,214 | INFO     | . stage-in = 0 s
[2025-10-12 19:48:50] 2025-10-12 17:48:18,214 | INFO     | . payload execution = 5839 s
[2025-10-12 19:48:50] 2025-10-12 17:48:18,214 | INFO     | . stage-out = 0 s
[2025-10-12 19:48:50] 2025-10-12 17:48:18,215 | INFO     | . log creation = 0 s
[2025-10-12 19:48:50] 2025-10-12 17:48:18,215 | INFO     | ..............................
[2025-10-12 19:48:50] 2025-10-12 17:48:18,400 | INFO     | 
[2025-10-12 19:48:50] 2025-10-12 17:48:18,400 | INFO     | job summary report
[2025-10-12 19:48:50] 2025-10-12 17:48:18,400 | INFO     | --------------------------------------------------
[2025-10-12 19:48:50] 2025-10-12 17:48:18,400 | INFO     | PanDA job id: 6839661044
[2025-10-12 19:48:50] 2025-10-12 17:48:18,400 | INFO     | task id: 46676269
[2025-10-12 19:48:50] 2025-10-12 17:48:18,401 | INFO     | errors: (none)
[2025-10-12 19:48:50] 2025-10-12 17:48:18,401 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 19:48:50] 2025-10-12 17:48:18,401 | INFO     | pilot state: finished 
[2025-10-12 19:48:50] 2025-10-12 17:48:18,401 | INFO     | transexitcode: 0
[2025-10-12 19:48:50] 2025-10-12 17:48:18,401 | INFO     | exeerrorcode: 0
[2025-10-12 19:48:50] 2025-10-12 17:48:18,401 | INFO     | exeerrordiag: 
[2025-10-12 19:48:50] 2025-10-12 17:48:18,401 | INFO     | exitcode: 0
[2025-10-12 19:48:50] 2025-10-12 17:48:18,401 | INFO     | exitmsg: OK
[2025-10-12 19:48:50] 2025-10-12 17:48:18,401 | INFO     | cpuconsumptiontime: 63491 s
[2025-10-12 19:48:50] 2025-10-12 17:48:18,401 | INFO     | nevents: 400
[2025-10-12 19:48:50] 2025-10-12 17:48:18,402 | INFO     | neventsw: 0
[2025-10-12 19:48:50] 2025-10-12 17:48:18,402 | INFO     | pid: 2698556
[2025-10-12 19:48:50] 2025-10-12 17:48:18,402 | INFO     | pgrp: 2698556
[2025-10-12 19:48:50] 2025-10-12 17:48:18,402 | INFO     | corecount: 12
[2025-10-12 19:48:50] 2025-10-12 17:48:18,402 | INFO     | event service: False
[2025-10-12 19:48:50] 2025-10-12 17:48:18,402 | INFO     | sizes: {0: 2348693, 1: 2348892, 4: 2349154, 11: 2349182, 5848: 2385010, 5850: 2385010, 5853: 2385332}
[2025-10-12 19:48:50] 2025-10-12 17:48:18,402 | INFO     | --------------------------------------------------
[2025-10-12 19:48:50] 2025-10-12 17:48:18,402 | INFO     | 
[2025-10-12 19:48:50] 2025-10-12 17:48:18,402 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-12 19:48:50] 2025-10-12 17:48:18,419 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 19:48:50] 2025-10-12 17:48:18,419 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 19:48:50] 2025-10-12 17:48:18,420 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 19:48:50] 2025-10-12 17:48:18,420 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 19:48:50] 2025-10-12 17:48:18,420 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 19:48:50] 2025-10-12 17:48:18,420 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 19:48:50] 2025-10-12 17:48:18,420 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 19:48:50] 2025-10-12 17:48:18,420 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 19:48:50] 2025-10-12 17:48:18,420 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 19:48:50] 2025-10-12 17:48:18,420 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 19:48:50] 2025-10-12 17:48:18,420 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 19:48:50] 2025-10-12 17:48:18,420 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 19:48:50] 2025-10-12 17:48:18,421 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 19:48:50] 2025-10-12 17:48:18,421 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 19:48:50] 2025-10-12 17:48:18,421 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 19:48:50] 2025-10-12 17:48:18,421 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 19:48:50] 2025-10-12 17:48:18,421 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 19:48:50] 2025-10-12 17:48:18,421 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 19:48:50] 2025-10-12 17:48:18,421 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 19:48:50] 2025-10-12 17:48:18,421 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 19:48:50] 2025-10-12 17:48:18,422 | INFO     | job 6839661044 has completed (purged errors)
[2025-10-12 19:48:50] 2025-10-12 17:48:18,422 | INFO     | overall cleanup function is called
[2025-10-12 19:48:50] 2025-10-12 17:48:19,425 | INFO     | --- collectZombieJob: --- 10, [2698556]
[2025-10-12 19:48:50] 2025-10-12 17:48:19,425 | INFO     | zombie collector waiting for pid 2698556
[2025-10-12 19:48:50] 2025-10-12 17:48:19,425 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 19:48:50] 2025-10-12 17:48:19,426 | INFO     | collected zombie processes
[2025-10-12 19:48:50] 2025-10-12 17:48:19,426 | INFO     | will attempt to kill all subprocesses of pid=2698556
[2025-10-12 19:48:50] 2025-10-12 17:48:19,505 | INFO     | process IDs to be killed: [2698556] (in reverse order)
[2025-10-12 19:48:50] 2025-10-12 17:48:19,546 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 19:48:50] 2025-10-12 17:48:19,546 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 19:48:50] 2025-10-12 17:48:19,549 | INFO     | did not find any defunct processes belonging to 2698556
[2025-10-12 19:48:50] 2025-10-12 17:48:19,551 | INFO     | did not find any defunct processes belonging to 2698556
[2025-10-12 19:48:50] 2025-10-12 17:48:19,551 | INFO     | ready for new job
[2025-10-12 19:48:50] 2025-10-12 17:48:19,551 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 19:48:50] 2025-10-12 17:48:19,553 | INFO     | ***************************************
[2025-10-12 19:48:50] 2025-10-12 17:48:19,553 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 19:48:50] 2025-10-12 17:48:19,553 | INFO     | ***************************************
[2025-10-12 19:48:50] 2025-10-12 17:48:19,553 | INFO     | 
[2025-10-12 19:48:50] 2025-10-12 17:48:19,575 | INFO     | architecture information:
[2025-10-12 19:48:50] 2025-10-12 17:48:19,575 | INFO     | executing command: cat /etc/os-release
[2025-10-12 19:48:50] 2025-10-12 17:48:19,585 | INFO     | cat /etc/os-release:
[2025-10-12 19:48:50] NAME="CentOS Linux"
[2025-10-12 19:48:50] VERSION="7 (Core)"
[2025-10-12 19:48:50] ID="centos"
[2025-10-12 19:48:50] ID_LIKE="rhel fedora"
[2025-10-12 19:48:50] VERSION_ID="7"
[2025-10-12 19:48:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 19:48:50] ANSI_COLOR="0;31"
[2025-10-12 19:48:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 19:48:50] HOME_URL="https://www.centos.org/"
[2025-10-12 19:48:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 19:48:50] 
[2025-10-12 19:48:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 19:48:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 19:48:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 19:48:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 19:48:50] 
[2025-10-12 19:48:50] 2025-10-12 17:48:19,586 | INFO     | ***************************************
[2025-10-12 19:48:50] 2025-10-12 17:48:20,089 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-12 19:48:50] 2025-10-12 17:48:20,100 | INFO     | sufficient remaining disk space (33592180736 B)
[2025-10-12 19:48:50] 2025-10-12 17:48:20,100 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 19:48:50] 2025-10-12 17:48:20,101 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 19:48:50] 2025-10-12 17:48:20,101 | INFO     | update_server=False
[2025-10-12 19:48:50] 2025-10-12 17:48:20,101 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 19:48:50] 2025-10-12 17:48:20,101 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:48:50] 2025-10-12 17:48:20,101 | INFO     | aborting loop
[2025-10-12 19:48:50] 2025-10-12 17:48:20,102 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 19:48:50] 2025-10-12 17:48:20,323 | INFO     | all job control threads have been joined
[2025-10-12 19:48:50] 2025-10-12 17:48:20,537 | INFO     | all data control threads have been joined
[2025-10-12 19:48:50] 2025-10-12 17:48:20,695 | INFO     | all payload control threads have been joined
[2025-10-12 19:48:50] 2025-10-12 17:48:20,828 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 19:48:50] 2025-10-12 17:48:21,105 | INFO     | [job] job monitor thread has finished
[2025-10-12 19:48:50] 2025-10-12 17:48:21,106 | INFO     | [job] queue monitor thread has finished
[2025-10-12 19:48:50] 2025-10-12 17:48:21,106 | INFO     | [job] retrieve thread has finished
[2025-10-12 19:48:50] 2025-10-12 17:48:21,129 | INFO     | [data] copytool_in thread has finished
[2025-10-12 19:48:50] 2025-10-12 17:48:21,129 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 19:48:50] 2025-10-12 17:48:21,285 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 19:48:50] 2025-10-12 17:48:21,325 | INFO     | [job] control thread has finished
[2025-10-12 19:48:50] 2025-10-12 17:48:21,467 | INFO     | [payload] failed_post thread has finished
[2025-10-12 19:48:50] 2025-10-12 17:48:21,543 | INFO     | [data] control thread has finished
[2025-10-12 19:48:50] 2025-10-12 17:48:21,577 | INFO     | [payload] validate_post thread has finished
[2025-10-12 19:48:50] 2025-10-12 17:48:21,697 | INFO     | [payload] control thread has finished
[2025-10-12 19:48:50] 2025-10-12 17:48:21,898 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 19:48:50] 2025-10-12 17:48:22,371 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 19:48:50] 2025-10-12 17:48:22,457 | INFO     | [job] validate thread has finished
[2025-10-12 19:48:50] 2025-10-12 17:48:23,290 | INFO     | [data] copytool_out thread has finished
[2025-10-12 19:48:50] 2025-10-12 17:48:24,834 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 19:48:50] 2025-10-12 17:48:30,669 | INFO     | job.realtimelogging is not enabled
[2025-10-12 19:48:50] 2025-10-12 17:48:31,674 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 19:48:50] 2025-10-12 17:48:39,553 | INFO     | [monitor] cgroup control has ended
[2025-10-12 19:48:50] 2025-10-12 17:48:41,051 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140200853428032)>', '<ExcThread(monitor, started 140200147678976)>']
[2025-10-12 19:48:50] 2025-10-12 17:48:46,076 | INFO     | all workflow threads have been joined
[2025-10-12 19:48:50] 2025-10-12 17:48:46,076 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 19:48:50] 2025-10-12 17:48:46,077 | INFO     | traces error code: 0
[2025-10-12 19:48:50] 2025-10-12 17:48:46,077 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 19:48:50] 2025-10-12 17:48:50,589 | INFO     | PID=2691962 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 19:48:50] 2025-10-12 17:48:50,590 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 19:48:50] 2025-10-12 17:48:50,590 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 19:48:50] 2025-10-12 17:48:50,590 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 19:48:50] 2025-10-12 17:48:50,590 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 19:48:50] 2025-10-12 17:48:50,590 | CRITICAL | thread 'MainThread' is not alive
[2025-10-12 19:48:50] 2025-10-12 17:48:50,590 | INFO     | [monitor] control thread has ended
[2025-10-12 19:48:50] 2025-10-12 17:48:50,673 [wrapper] ==== pilot stdout END ====
[2025-10-12 19:48:50] 2025-10-12 17:48:50,674 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 19:48:50] 2025-10-12 17:48:50,676 [wrapper] pilotpid: 2691962
[2025-10-12 19:48:50] 2025-10-12 17:48:50,678 [wrapper] Pilot exit status: 0
[2025-10-12 19:48:50] 2025-10-12 17:48:50,687 [wrapper] pandaids: 6839661044
[2025-10-12 19:48:50] 2025-10-12 17:48:50,713 [wrapper] cleanup supervisor_pilot 2710336 2691963
[2025-10-12 19:48:50] 2025-10-12 17:48:50,715 [wrapper] Test setup, not cleaning
[2025-10-12 19:48:50] 2025-10-12 17:48:50,717 [wrapper] apfmon messages muted
[2025-10-12 19:48:50] 2025-10-12 17:48:50,719 [wrapper] ==== wrapper stdout END ====
[2025-10-12 19:48:50] 2025-10-12 17:48:50,721 [wrapper] ==== wrapper stderr END ====
[2025-10-12 19:48:50]  *** Error codes and diagnostics ***
[2025-10-12 19:48:50]     "exeErrorCode": 0,
[2025-10-12 19:48:50]     "exeErrorDiag": "",
[2025-10-12 19:48:50]     "pilotErrorCode": 0,
[2025-10-12 19:48:50]     "pilotErrorDiag": "",
[2025-10-12 19:48:50]  *** Listing of results directory ***
[2025-10-12 19:48:50] total 414992
[2025-10-12 19:48:50] -rw-r--r-- 1 boinc boinc    557409 Okt 12 09:58 pilot3.tar.gz
[2025-10-12 19:48:50] -rw-r--r-- 1 boinc boinc      5112 Okt 12 10:25 queuedata.json
[2025-10-12 19:48:50] -rwx------ 1 boinc boinc     36292 Okt 12 10:27 runpilot2-wrapper.sh
[2025-10-12 19:48:50] -rw-r--r-- 1 boinc boinc       100 Okt 12 18:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 19:48:50] -rwxr-xr-x 1 boinc boinc      7986 Okt 12 18:10 run_atlas
[2025-10-12 19:48:50] -rw-r--r-- 1 boinc boinc       105 Okt 12 18:10 job.xml
[2025-10-12 19:48:50] -rw-r--r-- 2 boinc boinc     15120 Okt 12 18:10 start_atlas.sh
[2025-10-12 19:48:50] drwxrwx--x 2 boinc boinc      4096 Okt 12 18:10 shared
[2025-10-12 19:48:50] -rw-r--r-- 2 boinc boinc    569684 Okt 12 18:10 input.tar.gz
[2025-10-12 19:48:50] -rw-r--r-- 1 boinc boinc      6048 Okt 12 18:10 init_data.xml
[2025-10-12 19:48:50] -rw-r--r-- 2 boinc boinc 222924989 Okt 12 18:10 EVNT.46676267._003530.pool.root.1
[2025-10-12 19:48:50] -rw-r--r-- 1 boinc boinc         0 Okt 12 18:10 boinc_lockfile
[2025-10-12 19:48:50] -rw-r--r-- 1 boinc boinc      2550 Okt 12 18:10 pandaJob.out
[2025-10-12 19:48:50] -rw------- 1 boinc boinc    975528 Okt 12 18:10 agis_schedconf.cvmfs.json
[2025-10-12 19:48:50] -rw------- 1 boinc boinc   1560580 Okt 12 18:10 agis_ddmendpoints.agis.ALL.json
[2025-10-12 19:48:50] drwx------ 5 boinc boinc      4096 Okt 12 18:10 pilot3
[2025-10-12 19:48:50] -rw------- 1 boinc boinc 195619627 Okt 12 19:47 HITS.46676269._074182.pool.root.1
[2025-10-12 19:48:50] -rw-r--r-- 1 boinc boinc       530 Okt 12 19:47 boinc_task_state.xml
[2025-10-12 19:48:50] -rw------- 1 boinc boinc      1067 Okt 12 19:48 memory_monitor_summary.json
[2025-10-12 19:48:50] -rw------- 1 boinc boinc    415514 Okt 12 19:48 log.46676269._074182.job.log.tgz.1
[2025-10-12 19:48:50] -rw------- 1 boinc boinc      7841 Okt 12 19:48 heartbeat.json
[2025-10-12 19:48:50] -rw-r--r-- 1 boinc boinc      8192 Okt 12 19:48 boinc_mmap_file
[2025-10-12 19:48:50] -rw-r--r-- 1 boinc boinc        27 Okt 12 19:48 wrapper_checkpoint.txt
[2025-10-12 19:48:50] -rw------- 1 boinc boinc       817 Okt 12 19:48 pilotlog.txt
[2025-10-12 19:48:50] -rw------- 1 boinc boinc        95 Okt 12 19:48 pilot_heartbeat.json
[2025-10-12 19:48:50] -rw------- 1 boinc boinc    835776 Okt 12 19:48 log.46676269._074182.job.log.1
[2025-10-12 19:48:50] -rw------- 1 boinc boinc       357 Okt 12 19:48 output.list
[2025-10-12 19:48:50] -rw-r--r-- 1 boinc boinc       620 Okt 12 19:48 runtime_log
[2025-10-12 19:48:50] -rw------- 1 boinc boinc   1269760 Okt 12 19:48 result.tar.gz
[2025-10-12 19:48:50] -rw-r--r-- 1 boinc boinc      8760 Okt 12 19:48 runtime_log.err
[2025-10-12 19:48:50] -rw------- 1 boinc boinc       653 Okt 12 19:48 M1RMDm7a6R8n9Rq4apOajLDm4fhM0noT9bVof3QYDmTUTMDmgIWJIm.diag
[2025-10-12 19:48:50] -rw-r--r-- 1 boinc boinc     21472 Okt 12 19:48 stderr.txt
[2025-10-12 19:48:50] HITS file was successfully produced:
[2025-10-12 19:48:50] -rw------- 1 boinc boinc 195619627 Okt 12 19:47 shared/HITS.pool.root.1
[2025-10-12 19:48:50]  *** Contents of shared directory: ***
[2025-10-12 19:48:50] total 410564
[2025-10-12 19:48:50] -rw-r--r-- 2 boinc boinc     15120 Okt 12 18:10 start_atlas.sh
[2025-10-12 19:48:50] -rw-r--r-- 2 boinc boinc    569684 Okt 12 18:10 input.tar.gz
[2025-10-12 19:48:50] -rw-r--r-- 2 boinc boinc 222924989 Okt 12 18:10 ATLAS.root_0
[2025-10-12 19:48:50] -rw------- 1 boinc boinc 195619627 Okt 12 19:47 HITS.pool.root.1
[2025-10-12 19:48:50] -rw------- 1 boinc boinc   1269760 Okt 12 19:48 result.tar.gz
19:48:51 (2688119): run_atlas exited; CPU time 63177.937516
19:48:51 (2688119): called boinc_finish(0)

</stderr_txt>
]]>

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