Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
05:43:34 (2876492): wrapper (7.7.26015): starting
05:43:34 (2876492): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 05:43:34] Arguments: --nthreads 12
[2025-10-13 05:43:34] Threads: 12
[2025-10-13 05:43:34] Checking for CVMFS
[2025-10-13 05:43:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:43:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:43:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:43:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:43:34] 2.12.7.0 2633540 889 54540 151647 0 57 3366171 4096001 0 130560 0 657797 99.988 34616 46 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-13 05:43:34] CVMFS is ok
[2025-10-13 05:43:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:43:34] Checking for apptainer binary...
[2025-10-13 05:43:34] apptainer is not installed, using version from CVMFS
[2025-10-13 05:43:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:43:34] lithium
[2025-10-13 05:43:34] apptainer works
[2025-10-13 05:43:34] Set ATHENA_PROC_NUMBER=12
[2025-10-13 05:43:34] Set ATHENA_CORE_NUMBER=12
[2025-10-13 05:43:34] Starting ATLAS job with PandaID=6839774660
[2025-10-13 05:43:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:22:14]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:22:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-10-13 07:22:14]  is_altstaged=None
[2025-10-13 07:22:14]  is_tar=False
[2025-10-13 07:22:14]  lfn=log.46676269._074552.job.log.tgz.1
[2025-10-13 07:22:14]  mtime=0
[2025-10-13 07:22:14]  protocol_id=None
[2025-10-13 07:22:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 07:22:14]  replicas=None
[2025-10-13 07:22:14]  scope=mc23_13p6TeV
[2025-10-13 07:22:14]  status=None
[2025-10-13 07:22:14]  status_code=0
[2025-10-13 07:22:14]  storage_token=
[2025-10-13 07:22:14]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6839774660/log.46676269._074552.job.log.tgz.1
[2025-10-13 07:22:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/a4/log.46676269._074552.job.log.tgz.1
[2025-10-13 07:22:14]  workdir=None
[2025-10-13 07:22:14] ]
[2025-10-13 07:22:14] 2025-10-13 05:21:39,343 | INFO     | transferring file log.46676269._074552.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6839774660/log.46676269._074552.job.log.tgz.1 to /var/lib/boinc
[2025-10-13 07:22:14] 2025-10-13 05:21:39,343 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6839774660/log.46676269._074552.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.466762
[2025-10-13 07:22:14] 2025-10-13 05:21:39,357 | INFO     | adding to output.list: log.46676269._074552.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/a4/log.46676269._074552.job.log.tg
[2025-10-13 07:22:14] 2025-10-13 05:21:39,357 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 07:22:14] 2025-10-13 05:21:39,357 | INFO     | summary of transferred files:
[2025-10-13 07:22:14] 2025-10-13 05:21:39,357 | INFO     |  -- lfn=log.46676269._074552.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 07:22:14] 2025-10-13 05:21:39,358 | INFO     | stage-out finished correctly
[2025-10-13 07:22:14] 2025-10-13 05:21:39,623 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 07:22:14] 2025-10-13 05:21:39,693 | INFO     | job 6839774660 has state=finished
[2025-10-13 07:22:14] 2025-10-13 05:21:39,693 | INFO     | preparing for final server update for job 6839774660 in state='finished'
[2025-10-13 07:22:14] 2025-10-13 05:21:39,693 | INFO     | this job has now completed (state=finished)
[2025-10-13 07:22:14] 2025-10-13 05:21:39,694 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 07:22:14] 2025-10-13 05:21:39,694 | INFO     | log transfer has been attempted: DONE
[2025-10-13 07:22:14] 2025-10-13 05:21:39,694 | INFO     | job 6839774660 has finished - writing final server update
[2025-10-13 07:22:14] 2025-10-13 05:21:39,694 | INFO     | total number of processed events: 400 (read)
[2025-10-13 07:22:14] 2025-10-13 05:21:39,695 | INFO     | executing command: lscpu
[2025-10-13 07:22:14] 2025-10-13 05:21:39,732 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 07:22:14] 2025-10-13 05:21:40,744 | INFO     | monitor loop #429: job 0:6839774660 is in state 'finished'
[2025-10-13 07:22:14] 2025-10-13 05:21:40,744 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 07:22:14] 2025-10-13 05:21:40,835 | INFO     | time since job start (5874s) is within the limit (172800.0s)
[2025-10-13 07:22:14] 2025-10-13 05:21:42,503 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 07:22:14] 2025-10-13 05:21:42,505 | INFO     | found 8 cores (4 cores per socket, 2 sockets) HT, CPU MHz: 2179.578875
[2025-10-13 07:22:14] 2025-10-13 05:21:42,507 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6839774660/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:22:14] 2025-10-13 05:21:42,508 | INFO     | extracted standard info from prmon json
[2025-10-13 07:22:14] 2025-10-13 05:21:42,508 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:22:14] 2025-10-13 05:21:42,508 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:22:14] 2025-10-13 05:21:42,508 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:22:14] 2025-10-13 05:21:42,508 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:22:14] 2025-10-13 05:21:42,510 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:22:14] 2025-10-13 05:21:42,510 | INFO     | sum of square deviations: 218571540.0
[2025-10-13 07:22:14] 2025-10-13 05:21:42,510 | INFO     | sum of deviations: -16487582395.999998
[2025-10-13 07:22:14] 2025-10-13 05:21:42,511 | INFO     | mean x: 1760330037.0
[2025-10-13 07:22:14] 2025-10-13 05:21:42,511 | INFO     | mean y: 2820627.561797753
[2025-10-13 07:22:14] 2025-10-13 05:21:42,511 | INFO     | -- intersect: 132790403719.08061
[2025-10-13 07:22:14] 2025-10-13 05:21:42,511 | INFO     | intersect: 132790403719.08061
[2025-10-13 07:22:14] 2025-10-13 05:21:42,511 | INFO     | chi2: 0.14699259910405282
[2025-10-13 07:22:14] 2025-10-13 05:21:42,511 | INFO     | -- intersect: 132790403719.08061
[2025-10-13 07:22:14] 2025-10-13 05:21:42,511 | INFO     | current memory leak: -75.43 B/s (using 89 data points, chi2=0.15)
[2025-10-13 07:22:14] 2025-10-13 05:21:42,512 | INFO     | could have reported an average CPU frequency of 2632 MHz (7 samples)
[2025-10-13 07:22:14] 2025-10-13 05:21:42,512 | INFO     | ..............................
[2025-10-13 07:22:14] 2025-10-13 05:21:42,512 | INFO     | . Timing measurements:
[2025-10-13 07:22:14] 2025-10-13 05:21:42,512 | INFO     | . get job = 0 s
[2025-10-13 07:22:14] 2025-10-13 05:21:42,512 | INFO     | . initial setup = 1 s
[2025-10-13 07:22:14] 2025-10-13 05:21:42,512 | INFO     | . payload setup = 4 s
[2025-10-13 07:22:14] 2025-10-13 05:21:42,512 | INFO     | . stage-in = 0 s
[2025-10-13 07:22:14] 2025-10-13 05:21:42,512 | INFO     | . payload execution = 5850 s
[2025-10-13 07:22:14] 2025-10-13 05:21:42,512 | INFO     | . stage-out = 0 s
[2025-10-13 07:22:14] 2025-10-13 05:21:42,512 | INFO     | . log creation = 0 s
[2025-10-13 07:22:14] 2025-10-13 05:21:42,512 | INFO     | ..............................
[2025-10-13 07:22:14] 2025-10-13 05:21:42,588 | INFO     | 
[2025-10-13 07:22:14] 2025-10-13 05:21:42,588 | INFO     | job summary report
[2025-10-13 07:22:14] 2025-10-13 05:21:42,588 | INFO     | --------------------------------------------------
[2025-10-13 07:22:14] 2025-10-13 05:21:42,589 | INFO     | PanDA job id: 6839774660
[2025-10-13 07:22:14] 2025-10-13 05:21:42,589 | INFO     | task id: 46676269
[2025-10-13 07:22:14] 2025-10-13 05:21:42,589 | INFO     | errors: (none)
[2025-10-13 07:22:14] 2025-10-13 05:21:42,589 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:22:14] 2025-10-13 05:21:42,589 | INFO     | pilot state: finished 
[2025-10-13 07:22:14] 2025-10-13 05:21:42,589 | INFO     | transexitcode: 0
[2025-10-13 07:22:14] 2025-10-13 05:21:42,589 | INFO     | exeerrorcode: 0
[2025-10-13 07:22:14] 2025-10-13 05:21:42,589 | INFO     | exeerrordiag: 
[2025-10-13 07:22:14] 2025-10-13 05:21:42,589 | INFO     | exitcode: 0
[2025-10-13 07:22:14] 2025-10-13 05:21:42,589 | INFO     | exitmsg: OK
[2025-10-13 07:22:14] 2025-10-13 05:21:42,590 | INFO     | cpuconsumptiontime: 65479 s
[2025-10-13 07:22:14] 2025-10-13 05:21:42,590 | INFO     | nevents: 400
[2025-10-13 07:22:14] 2025-10-13 05:21:42,590 | INFO     | neventsw: 0
[2025-10-13 07:22:14] 2025-10-13 05:21:42,590 | INFO     | pid: 2886899
[2025-10-13 07:22:14] 2025-10-13 05:21:42,590 | INFO     | pgrp: 2886899
[2025-10-13 07:22:14] 2025-10-13 05:21:42,590 | INFO     | corecount: 12
[2025-10-13 07:22:14] 2025-10-13 05:21:42,590 | INFO     | event service: False
[2025-10-13 07:22:14] 2025-10-13 05:21:42,590 | INFO     | sizes: {0: 2348864, 3: 2349126, 11: 2349154, 5858: 2375970, 5859: 2385038, 5862: 2385176}
[2025-10-13 07:22:14] 2025-10-13 05:21:42,590 | INFO     | --------------------------------------------------
[2025-10-13 07:22:14] 2025-10-13 05:21:42,590 | INFO     | 
[2025-10-13 07:22:14] 2025-10-13 05:21:42,590 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-13 07:22:14] 2025-10-13 05:21:42,608 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:22:14] 2025-10-13 05:21:42,608 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:22:14] 2025-10-13 05:21:42,608 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:22:14] 2025-10-13 05:21:42,608 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:22:14] 2025-10-13 05:21:42,608 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:22:14] 2025-10-13 05:21:42,608 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:22:14] 2025-10-13 05:21:42,609 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:22:14] 2025-10-13 05:21:42,609 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:22:14] 2025-10-13 05:21:42,609 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:22:14] 2025-10-13 05:21:42,609 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:22:14] 2025-10-13 05:21:42,609 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:22:14] 2025-10-13 05:21:42,609 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:22:14] 2025-10-13 05:21:42,609 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:22:14] 2025-10-13 05:21:42,609 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:22:14] 2025-10-13 05:21:42,609 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:22:14] 2025-10-13 05:21:42,609 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:22:14] 2025-10-13 05:21:42,610 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:22:14] 2025-10-13 05:21:42,610 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:22:14] 2025-10-13 05:21:42,610 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:22:14] 2025-10-13 05:21:42,610 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:22:14] 2025-10-13 05:21:42,610 | INFO     | job 6839774660 has completed (purged errors)
[2025-10-13 07:22:14] 2025-10-13 05:21:42,610 | INFO     | overall cleanup function is called
[2025-10-13 07:22:14] 2025-10-13 05:21:43,617 | INFO     | --- collectZombieJob: --- 10, [2886899]
[2025-10-13 07:22:14] 2025-10-13 05:21:43,617 | INFO     | zombie collector waiting for pid 2886899
[2025-10-13 07:22:14] 2025-10-13 05:21:43,618 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:22:14] 2025-10-13 05:21:43,618 | INFO     | collected zombie processes
[2025-10-13 07:22:14] 2025-10-13 05:21:43,618 | INFO     | will attempt to kill all subprocesses of pid=2886899
[2025-10-13 07:22:14] 2025-10-13 05:21:43,692 | INFO     | process IDs to be killed: [2886899] (in reverse order)
[2025-10-13 07:22:14] 2025-10-13 05:21:43,724 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:22:14] 2025-10-13 05:21:43,724 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:22:14] 2025-10-13 05:21:43,727 | INFO     | did not find any defunct processes belonging to 2886899
[2025-10-13 07:22:14] 2025-10-13 05:21:43,729 | INFO     | did not find any defunct processes belonging to 2886899
[2025-10-13 07:22:14] 2025-10-13 05:21:43,730 | INFO     | ready for new job
[2025-10-13 07:22:14] 2025-10-13 05:21:43,730 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:22:14] 2025-10-13 05:21:43,731 | INFO     | ***************************************
[2025-10-13 07:22:14] 2025-10-13 05:21:43,731 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:22:14] 2025-10-13 05:21:43,731 | INFO     | ***************************************
[2025-10-13 07:22:14] 2025-10-13 05:21:43,731 | INFO     | 
[2025-10-13 07:22:14] 2025-10-13 05:21:43,751 | INFO     | architecture information:
[2025-10-13 07:22:14] 2025-10-13 05:21:43,751 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:22:14] 2025-10-13 05:21:43,761 | INFO     | cat /etc/os-release:
[2025-10-13 07:22:14] NAME="CentOS Linux"
[2025-10-13 07:22:14] VERSION="7 (Core)"
[2025-10-13 07:22:14] ID="centos"
[2025-10-13 07:22:14] ID_LIKE="rhel fedora"
[2025-10-13 07:22:14] VERSION_ID="7"
[2025-10-13 07:22:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:22:14] ANSI_COLOR="0;31"
[2025-10-13 07:22:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:22:14] HOME_URL="https://www.centos.org/"
[2025-10-13 07:22:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:22:14] 
[2025-10-13 07:22:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:22:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:22:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:22:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:22:14] 
[2025-10-13 07:22:14] 2025-10-13 05:21:43,762 | INFO     | ***************************************
[2025-10-13 07:22:14] 2025-10-13 05:21:44,265 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-13 07:22:14] 2025-10-13 05:21:44,276 | INFO     | sufficient remaining disk space (33505148928 B)
[2025-10-13 07:22:14] 2025-10-13 05:21:44,277 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:22:14] 2025-10-13 05:21:44,277 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:22:14] 2025-10-13 05:21:44,277 | INFO     | update_server=False
[2025-10-13 07:22:14] 2025-10-13 05:21:44,277 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:22:14] 2025-10-13 05:21:44,277 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:22:14] 2025-10-13 05:21:44,277 | INFO     | aborting loop
[2025-10-13 07:22:14] 2025-10-13 05:21:44,278 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:22:14] 2025-10-13 05:21:44,939 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:22:14] 2025-10-13 05:21:45,177 | INFO     | all data control threads have been joined
[2025-10-13 07:22:14] 2025-10-13 05:21:45,186 | INFO     | all job control threads have been joined
[2025-10-13 07:22:14] 2025-10-13 05:21:45,281 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:22:14] 2025-10-13 05:21:45,282 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:22:14] 2025-10-13 05:21:45,282 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:22:14] 2025-10-13 05:21:45,406 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:22:14] 2025-10-13 05:21:45,627 | INFO     | all payload control threads have been joined
[2025-10-13 07:22:14] 2025-10-13 05:21:45,694 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:22:14] 2025-10-13 05:21:45,697 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:22:14] 2025-10-13 05:21:45,793 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:22:14] 2025-10-13 05:21:46,114 | INFO     | [job] validate thread has finished
[2025-10-13 07:22:14] 2025-10-13 05:21:46,165 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:22:14] 2025-10-13 05:21:46,181 | INFO     | [data] control thread has finished
[2025-10-13 07:22:14] 2025-10-13 05:21:46,189 | INFO     | [job] control thread has finished
[2025-10-13 07:22:14] 2025-10-13 05:21:46,305 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:22:14] 2025-10-13 05:21:46,472 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:22:14] 2025-10-13 05:21:46,633 | INFO     | [payload] control thread has finished
[2025-10-13 07:22:14] 2025-10-13 05:21:46,945 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:22:14] 2025-10-13 05:21:49,703 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:22:14] 2025-10-13 05:21:54,178 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:22:14] 2025-10-13 05:21:55,163 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:22:14] 2025-10-13 05:21:56,168 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:22:14] 2025-10-13 05:21:56,811 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140320035010368)>', '<ExcThread(monitor, started 140319458846464)>']
[2025-10-13 07:22:14] 2025-10-13 05:22:01,836 | INFO     | all workflow threads have been joined
[2025-10-13 07:22:14] 2025-10-13 05:22:01,836 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:22:14] 2025-10-13 05:22:01,837 | INFO     | traces error code: 0
[2025-10-13 07:22:14] 2025-10-13 05:22:01,837 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:22:14] 2025-10-13 05:22:14,017 | INFO     | PID=2880325 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:22:14] 2025-10-13 05:22:14,018 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:22:14] 2025-10-13 05:22:14,018 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:22:14] 2025-10-13 05:22:14,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:22:14] 2025-10-13 05:22:14,018 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:22:14] 2025-10-13 05:22:14,018 | INFO     | [monitor] control thread has ended
[2025-10-13 07:22:14] 2025-10-13 05:22:14,104 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:22:14] 2025-10-13 05:22:14,107 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:22:14] 2025-10-13 05:22:14,108 [wrapper] pilotpid: 2880325
[2025-10-13 07:22:14] 2025-10-13 05:22:14,111 [wrapper] Pilot exit status: 0
[2025-10-13 07:22:14] 2025-10-13 05:22:14,118 [wrapper] pandaids: 6839774660
[2025-10-13 07:22:14] 2025-10-13 05:22:14,144 [wrapper] cleanup supervisor_pilot 2898832 2880326
[2025-10-13 07:22:14] 2025-10-13 05:22:14,146 [wrapper] Test setup, not cleaning
[2025-10-13 07:22:14] 2025-10-13 05:22:14,148 [wrapper] apfmon messages muted
[2025-10-13 07:22:14] 2025-10-13 05:22:14,151 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:22:14] 2025-10-13 05:22:14,153 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:22:14]  *** Error codes and diagnostics ***
[2025-10-13 07:22:14]     "exeErrorCode": 0,
[2025-10-13 07:22:14]     "exeErrorDiag": "",
[2025-10-13 07:22:14]     "pilotErrorCode": 0,
[2025-10-13 07:22:14]     "pilotErrorDiag": "",
[2025-10-13 07:22:14]  *** Listing of results directory ***
[2025-10-13 07:22:14] total 419148
[2025-10-13 07:22:14] -rw-r--r-- 1 boinc boinc    557409 Okt 12 10:37 pilot3.tar.gz
[2025-10-13 07:22:14] -rwx------ 1 boinc boinc     36292 Okt 12 10:41 runpilot2-wrapper.sh
[2025-10-13 07:22:14] -rw-r--r-- 1 boinc boinc      5112 Okt 12 10:41 queuedata.json
[2025-10-13 07:22:14] -rw-r--r-- 1 boinc boinc       100 Okt 13 05:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:22:14] -rwxr-xr-x 1 boinc boinc      7986 Okt 13 05:43 run_atlas
[2025-10-13 07:22:14] -rw-r--r-- 1 boinc boinc       105 Okt 13 05:43 job.xml
[2025-10-13 07:22:14] -rw-r--r-- 2 boinc boinc     15120 Okt 13 05:43 start_atlas.sh
[2025-10-13 07:22:14] drwxrwx--x 2 boinc boinc      4096 Okt 13 05:43 shared
[2025-10-13 07:22:14] -rw-r--r-- 2 boinc boinc    569681 Okt 13 05:43 input.tar.gz
[2025-10-13 07:22:14] -rw-r--r-- 1 boinc boinc      6048 Okt 13 05:43 init_data.xml
[2025-10-13 07:22:14] -rw-r--r-- 2 boinc boinc 221057884 Okt 13 05:43 EVNT.46676267._003544.pool.root.1
[2025-10-13 07:22:14] -rw-r--r-- 1 boinc boinc         0 Okt 13 05:43 boinc_lockfile
[2025-10-13 07:22:14] -rw-r--r-- 1 boinc boinc      2550 Okt 13 05:43 pandaJob.out
[2025-10-13 07:22:14] -rw------- 1 boinc boinc    974373 Okt 13 05:43 agis_schedconf.cvmfs.json
[2025-10-13 07:22:14] -rw------- 1 boinc boinc   1560580 Okt 13 05:43 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:22:14] drwx------ 5 boinc boinc      4096 Okt 13 05:43 pilot3
[2025-10-13 07:22:14] -rw-r--r-- 1 boinc boinc       529 Okt 13 07:21 boinc_task_state.xml
[2025-10-13 07:22:14] -rw------- 1 boinc boinc 201787027 Okt 13 07:21 HITS.46676269._074552.pool.root.1
[2025-10-13 07:22:14] -rw------- 1 boinc boinc      1067 Okt 13 07:21 memory_monitor_summary.json
[2025-10-13 07:22:14] -rw------- 1 boinc boinc    395407 Okt 13 07:21 log.46676269._074552.job.log.tgz.1
[2025-10-13 07:22:14] -rw------- 1 boinc boinc        95 Okt 13 07:21 pilot_heartbeat.json
[2025-10-13 07:22:14] -rw------- 1 boinc boinc      7845 Okt 13 07:21 heartbeat.json
[2025-10-13 07:22:14] -rw-r--r-- 1 boinc boinc        27 Okt 13 07:22 wrapper_checkpoint.txt
[2025-10-13 07:22:14] -rw-r--r-- 1 boinc boinc      8192 Okt 13 07:22 boinc_mmap_file
[2025-10-13 07:22:14] -rw------- 1 boinc boinc       747 Okt 13 07:22 pilotlog.txt
[2025-10-13 07:22:14] -rw------- 1 boinc boinc    835971 Okt 13 07:22 log.46676269._074552.job.log.1
[2025-10-13 07:22:14] -rw------- 1 boinc boinc       357 Okt 13 07:22 output.list
[2025-10-13 07:22:14] -rw-r--r-- 1 boinc boinc       620 Okt 13 07:22 runtime_log
[2025-10-13 07:22:14] -rw------- 1 boinc boinc   1249280 Okt 13 07:22 result.tar.gz
[2025-10-13 07:22:14] -rw------- 1 boinc boinc       653 Okt 13 07:22 ylKNDmyo6R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPCjNDmYkYNbn.diag
[2025-10-13 07:22:14] -rw-r--r-- 1 boinc boinc      8760 Okt 13 07:22 runtime_log.err
[2025-10-13 07:22:14] -rw-r--r-- 1 boinc boinc     21121 Okt 13 07:22 stderr.txt
[2025-10-13 07:22:14] HITS file was successfully produced:
[2025-10-13 07:22:14] -rw------- 1 boinc boinc 201787027 Okt 13 07:21 shared/HITS.pool.root.1
[2025-10-13 07:22:14]  *** Contents of shared directory: ***
[2025-10-13 07:22:14] total 414744
[2025-10-13 07:22:14] -rw-r--r-- 2 boinc boinc     15120 Okt 13 05:43 start_atlas.sh
[2025-10-13 07:22:14] -rw-r--r-- 2 boinc boinc    569681 Okt 13 05:43 input.tar.gz
[2025-10-13 07:22:14] -rw-r--r-- 2 boinc boinc 221057884 Okt 13 05:43 ATLAS.root_0
[2025-10-13 07:22:14] -rw------- 1 boinc boinc 201787027 Okt 13 07:21 HITS.pool.root.1
[2025-10-13 07:22:14] -rw------- 1 boinc boinc   1249280 Okt 13 07:22 result.tar.gz
07:22:16 (2876492): run_atlas exited; CPU time 65202.363640
07:22:16 (2876492): called boinc_finish(0)

</stderr_txt>
]]>

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