Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
13:11:51 (59698): wrapper (7.7.26015): starting
13:11:51 (59698): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 13:11:51] Arguments: --nthreads 12
[2025-10-12 13:11:51] Threads: 12
[2025-10-12 13:11:51] Checking for CVMFS
[2025-10-12 13:11:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 13:11:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 13:11:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 13:11:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 13:11:51] 2.11.0.0 3299214 3105 87148 151620 2 188 5379686 6144000 13896 130560 0 60904575 100.000 110214 192 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-12 13:11:51] CVMFS is ok
[2025-10-12 13:11:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 13:11:51] Checking for apptainer binary...
[2025-10-12 13:11:51] apptainer is not installed, using version from CVMFS
[2025-10-12 13:11:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 13:11:52] radiat0r
[2025-10-12 13:11:52] apptainer works
[2025-10-12 13:11:52] Set ATHENA_PROC_NUMBER=12
[2025-10-12 13:11:52] Set ATHENA_CORE_NUMBER=12
[2025-10-12 13:11:52] Starting ATLAS job with PandaID=6839661093
[2025-10-12 13:11:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 14:04:16]  *** The last 200 lines of the pilot log: ***
[2025-10-12 14:04:16]  status=None
[2025-10-12 14:04:16]  status_code=0
[2025-10-12 14:04:16]  storage_token=
[2025-10-12 14:04:16]  surl=/var/lib/boinc/slots/18/PanDA_Pilot-6839661093/log.46676269._074231.job.log.tgz.1
[2025-10-12 14:04:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e2/af/log.46676269._074231.job.log.tgz.1
[2025-10-12 14:04:16]  workdir=None
[2025-10-12 14:04:16] ]
[2025-10-12 14:04:16] 2025-10-12 14:03:31,813 | INFO     | transferring file log.46676269._074231.job.log.tgz.1 from /var/lib/boinc/slots/18/PanDA_Pilot-6839661093/log.46676269._074231.job.log.tgz.1 to /var/lib/boinc/slots
[2025-10-12 14:04:16] 2025-10-12 14:03:31,813 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/18/PanDA_Pilot-6839661093/log.46676269._074231.job.log.tgz.1 /var/lib/boinc/slots/18/log.46676269._074231.j
[2025-10-12 14:04:16] 2025-10-12 14:03:31,844 | INFO     | adding to output.list: log.46676269._074231.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e2/af/log.46676269._074231.job.log.tg
[2025-10-12 14:04:16] 2025-10-12 14:03:31,845 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-12 14:04:16] 2025-10-12 14:03:31,845 | INFO     | summary of transferred files:
[2025-10-12 14:04:16] 2025-10-12 14:03:31,845 | INFO     |  -- lfn=log.46676269._074231.job.log.tgz.1, status_code=0, status=transferred
[2025-10-12 14:04:16] 2025-10-12 14:03:31,846 | INFO     | stage-out finished correctly
[2025-10-12 14:04:16] 2025-10-12 14:03:33,099 | INFO     | time since job start (3087s) is within the limit (172800.0s)
[2025-10-12 14:04:16] 2025-10-12 14:03:33,322 | INFO     | monitor loop #216: job 0:6839661093 is in state 'finished'
[2025-10-12 14:04:16] 2025-10-12 14:03:33,323 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:04:16] 2025-10-12 14:03:33,443 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-12 14:04:16] 2025-10-12 14:03:33,542 | INFO     | job 6839661093 has state=finished
[2025-10-12 14:04:16] 2025-10-12 14:03:33,542 | INFO     | preparing for final server update for job 6839661093 in state='finished'
[2025-10-12 14:04:16] 2025-10-12 14:03:33,543 | INFO     | this job has now completed (state=finished)
[2025-10-12 14:04:16] 2025-10-12 14:03:33,543 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-12 14:04:16] 2025-10-12 14:03:33,543 | INFO     | log transfer has been attempted: DONE
[2025-10-12 14:04:16] 2025-10-12 14:03:33,544 | INFO     | job 6839661093 has finished - writing final server update
[2025-10-12 14:04:16] 2025-10-12 14:03:33,544 | INFO     | total number of processed events: 400 (read)
[2025-10-12 14:04:16] 2025-10-12 14:03:33,545 | INFO     | executing command: lscpu
[2025-10-12 14:04:16] 2025-10-12 14:03:33,738 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-12 14:04:16] 2025-10-12 14:03:35,103 | INFO     | time since job start (3089s) is within the limit (172800.0s)
[2025-10-12 14:04:16] 2025-10-12 14:03:35,826 | INFO     | monitor loop #217: job 0:6839661093 is in state 'finished'
[2025-10-12 14:04:16] 2025-10-12 14:03:35,827 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:04:16] 2025-10-12 14:03:37,109 | INFO     | time since job start (3091s) is within the limit (172800.0s)
[2025-10-12 14:04:16] 2025-10-12 14:03:38,330 | INFO     | monitor loop #218: job 0:6839661093 is in state 'finished'
[2025-10-12 14:04:16] 2025-10-12 14:03:38,330 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:04:16] 2025-10-12 14:03:39,114 | INFO     | time since job start (3093s) is within the limit (172800.0s)
[2025-10-12 14:04:16] 2025-10-12 14:03:40,724 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-12 14:04:16] 2025-10-12 14:03:40,784 | INFO     | found 128 cores (64 cores per socket, 2 sockets) HT, CPU MHz: 2382.7608203125005
[2025-10-12 14:04:16] 2025-10-12 14:03:40,833 | INFO     | monitor loop #219: job 0:6839661093 is in state 'finished'
[2025-10-12 14:04:16] 2025-10-12 14:03:40,834 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-12 14:04:16] 2025-10-12 14:03:40,838 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6839661093/memory_monitor_summary.json (trf name=prmon)
[2025-10-12 14:04:16] 2025-10-12 14:03:40,838 | INFO     | extracted standard info from prmon json
[2025-10-12 14:04:16] 2025-10-12 14:03:40,839 | INFO     | extracted standard memory fields from prmon json
[2025-10-12 14:04:16] 2025-10-12 14:03:40,839 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-12 14:04:16] 2025-10-12 14:03:40,839 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-12 14:04:16] 2025-10-12 14:03:40,839 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-12 14:04:16] 2025-10-12 14:03:40,841 | INFO     | fitting pss+swap vs Time
[2025-10-12 14:04:16] 2025-10-12 14:03:40,841 | INFO     | sum of square deviations: 24640462.0
[2025-10-12 14:04:16] 2025-10-12 14:03:40,841 | INFO     | sum of deviations: 784857354.0000001
[2025-10-12 14:04:16] 2025-10-12 14:03:40,842 | INFO     | mean x: 1760276346.0
[2025-10-12 14:04:16] 2025-10-12 14:03:40,842 | INFO     | mean y: 2657291.2325581396
[2025-10-12 14:04:16] 2025-10-12 14:03:40,842 | INFO     | -- intersect: -56066333429.410126
[2025-10-12 14:04:16] 2025-10-12 14:03:40,842 | INFO     | intersect: -56066333429.410126
[2025-10-12 14:04:16] 2025-10-12 14:03:40,842 | INFO     | chi2: 0.007558505119948049
[2025-10-12 14:04:16] 2025-10-12 14:03:40,842 | INFO     | -- intersect: -56066333429.410126
[2025-10-12 14:04:16] 2025-10-12 14:03:40,842 | INFO     | current memory leak: 31.85 B/s (using 43 data points, chi2=0.01)
[2025-10-12 14:04:16] 2025-10-12 14:03:40,843 | INFO     | could have reported an average CPU frequency of 2344 MHz (5 samples)
[2025-10-12 14:04:16] 2025-10-12 14:03:40,843 | INFO     | ..............................
[2025-10-12 14:04:16] 2025-10-12 14:03:40,843 | INFO     | . Timing measurements:
[2025-10-12 14:04:16] 2025-10-12 14:03:40,843 | INFO     | . get job = 0 s
[2025-10-12 14:04:16] 2025-10-12 14:03:40,843 | INFO     | . initial setup = 1 s
[2025-10-12 14:04:16] 2025-10-12 14:03:40,843 | INFO     | . payload setup = 7 s
[2025-10-12 14:04:16] 2025-10-12 14:03:40,843 | INFO     | . stage-in = 0 s
[2025-10-12 14:04:16] 2025-10-12 14:03:40,843 | INFO     | . payload execution = 3052 s
[2025-10-12 14:04:16] 2025-10-12 14:03:40,844 | INFO     | . stage-out = 0 s
[2025-10-12 14:04:16] 2025-10-12 14:03:40,844 | INFO     | . log creation = 0 s
[2025-10-12 14:04:16] 2025-10-12 14:03:40,844 | INFO     | ..............................
[2025-10-12 14:04:16] 2025-10-12 14:03:40,944 | INFO     | 
[2025-10-12 14:04:16] 2025-10-12 14:03:40,945 | INFO     | job summary report
[2025-10-12 14:04:16] 2025-10-12 14:03:40,945 | INFO     | --------------------------------------------------
[2025-10-12 14:04:16] 2025-10-12 14:03:40,945 | INFO     | PanDA job id: 6839661093
[2025-10-12 14:04:16] 2025-10-12 14:03:40,945 | INFO     | task id: 46676269
[2025-10-12 14:04:16] 2025-10-12 14:03:40,945 | INFO     | errors: (none)
[2025-10-12 14:04:16] 2025-10-12 14:03:40,945 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 14:04:16] 2025-10-12 14:03:40,945 | INFO     | pilot state: finished 
[2025-10-12 14:04:16] 2025-10-12 14:03:40,945 | INFO     | transexitcode: 0
[2025-10-12 14:04:16] 2025-10-12 14:03:40,945 | INFO     | exeerrorcode: 0
[2025-10-12 14:04:16] 2025-10-12 14:03:40,946 | INFO     | exeerrordiag: 
[2025-10-12 14:04:16] 2025-10-12 14:03:40,946 | INFO     | exitcode: 0
[2025-10-12 14:04:16] 2025-10-12 14:03:40,946 | INFO     | exitmsg: OK
[2025-10-12 14:04:16] 2025-10-12 14:03:40,946 | INFO     | cpuconsumptiontime: 32306 s
[2025-10-12 14:04:16] 2025-10-12 14:03:40,946 | INFO     | nevents: 400
[2025-10-12 14:04:16] 2025-10-12 14:03:40,946 | INFO     | neventsw: 0
[2025-10-12 14:04:16] 2025-10-12 14:03:40,946 | INFO     | pid: 72570
[2025-10-12 14:04:16] 2025-10-12 14:03:40,946 | INFO     | pgrp: 72570
[2025-10-12 14:04:16] 2025-10-12 14:03:40,946 | INFO     | corecount: 12
[2025-10-12 14:04:16] 2025-10-12 14:03:40,946 | INFO     | event service: False
[2025-10-12 14:04:16] 2025-10-12 14:03:40,946 | INFO     | sizes: {0: 2348687, 1: 2348886, 7: 2349148, 12: 2349176, 3064: 2374721, 3066: 2383721, 3068: 2383905, 3075: 2384131}
[2025-10-12 14:04:16] 2025-10-12 14:03:40,946 | INFO     | --------------------------------------------------
[2025-10-12 14:04:16] 2025-10-12 14:03:40,947 | INFO     | 
[2025-10-12 14:04:16] 2025-10-12 14:03:40,947 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2025-10-12 14:04:16] 2025-10-12 14:03:40,977 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 14:03:40,978 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 14:03:40,978 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 14:03:40,978 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 14:03:40,978 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 14:03:40,978 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 14:03:40,978 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 14:03:40,978 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 14:03:40,978 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 14:03:40,978 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 14:03:40,979 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 14:03:40,979 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 14:03:40,979 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 14:03:40,979 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 14:03:40,979 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 14:03:40,979 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 14:03:40,979 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 14:03:40,979 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 14:04:16] 2025-10-12 14:03:40,979 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 14:03:40,979 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 14:04:16] 2025-10-12 14:03:40,980 | INFO     | job 6839661093 has completed (purged errors)
[2025-10-12 14:04:16] 2025-10-12 14:03:40,980 | INFO     | overall cleanup function is called
[2025-10-12 14:04:16] 2025-10-12 14:03:41,990 | INFO     | --- collectZombieJob: --- 10, [72570]
[2025-10-12 14:04:16] 2025-10-12 14:03:41,991 | INFO     | zombie collector waiting for pid 72570
[2025-10-12 14:04:16] 2025-10-12 14:03:41,991 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 14:04:16] 2025-10-12 14:03:41,991 | INFO     | collected zombie processes
[2025-10-12 14:04:16] 2025-10-12 14:03:41,991 | INFO     | will attempt to kill all subprocesses of pid=72570
[2025-10-12 14:04:16] 2025-10-12 14:03:42,840 | INFO     | process IDs to be killed: [72570] (in reverse order)
[2025-10-12 14:04:16] 2025-10-12 14:03:43,121 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 14:04:16] 2025-10-12 14:03:43,122 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 14:04:16] 2025-10-12 14:03:43,152 | INFO     | did not find any defunct processes belonging to 72570
[2025-10-12 14:04:16] 2025-10-12 14:03:43,180 | INFO     | did not find any defunct processes belonging to 72570
[2025-10-12 14:04:16] 2025-10-12 14:03:43,181 | INFO     | ready for new job
[2025-10-12 14:04:16] 2025-10-12 14:03:43,181 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 14:04:16] 2025-10-12 14:03:43,183 | INFO     | ***************************************
[2025-10-12 14:04:16] 2025-10-12 14:03:43,183 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-12 14:04:16] 2025-10-12 14:03:43,183 | INFO     | ***************************************
[2025-10-12 14:04:16] 2025-10-12 14:03:43,183 | INFO     | 
[2025-10-12 14:04:16] 2025-10-12 14:03:43,225 | INFO     | architecture information:
[2025-10-12 14:04:16] 2025-10-12 14:03:43,225 | INFO     | executing command: cat /etc/os-release
[2025-10-12 14:04:16] 2025-10-12 14:03:43,249 | INFO     | cat /etc/os-release:
[2025-10-12 14:04:16] NAME="CentOS Linux"
[2025-10-12 14:04:16] VERSION="7 (Core)"
[2025-10-12 14:04:16] ID="centos"
[2025-10-12 14:04:16] ID_LIKE="rhel fedora"
[2025-10-12 14:04:16] VERSION_ID="7"
[2025-10-12 14:04:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 14:04:16] ANSI_COLOR="0;31"
[2025-10-12 14:04:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 14:04:16] HOME_URL="https://www.centos.org/"
[2025-10-12 14:04:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 14:04:16] 
[2025-10-12 14:04:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 14:04:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 14:04:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 14:04:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 14:04:16] 
[2025-10-12 14:04:16] 2025-10-12 14:03:43,250 | INFO     | ***************************************
[2025-10-12 14:04:16] 2025-10-12 14:03:43,753 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2025-10-12 14:04:16] 2025-10-12 14:03:43,781 | INFO     | sufficient remaining disk space (1724869771264 B)
[2025-10-12 14:04:16] 2025-10-12 14:03:43,782 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 14:04:16] 2025-10-12 14:03:43,782 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 14:04:16] 2025-10-12 14:03:43,782 | INFO     | update_server=False
[2025-10-12 14:04:16] 2025-10-12 14:03:43,782 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 14:04:16] 2025-10-12 14:03:44,049 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 14:04:16] 2025-10-12 14:03:44,170 | INFO     | all data control threads have been joined
[2025-10-12 14:04:16] 2025-10-12 14:03:44,338 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:04:16] 2025-10-12 14:03:44,339 | INFO     | aborting loop
[2025-10-12 14:04:16] 2025-10-12 14:03:44,787 | INFO     | [job] retrieve thread has finished
[2025-10-12 14:04:16] 2025-10-12 14:03:44,822 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 14:04:16] 2025-10-12 14:03:44,938 | INFO     | all job control threads have been joined
[2025-10-12 14:04:16] 2025-10-12 14:03:44,965 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 14:04:16] 2025-10-12 14:03:44,979 | INFO     | [payload] validate_post thread has finished
[2025-10-12 14:04:16] 2025-10-12 14:03:45,080 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 14:04:16] 2025-10-12 14:03:45,129 | INFO     | all payload control threads have been joined
[2025-10-12 14:04:16] 2025-10-12 14:03:45,174 | INFO     | [data] control thread has finished
[2025-10-12 14:04:16] 2025-10-12 14:03:45,198 | INFO     | [data] copytool_in thread has finished
[2025-10-12 14:04:16] 2025-10-12 14:03:45,342 | INFO     | [job] job monitor thread has finished
[2025-10-12 14:04:16] 2025-10-12 14:03:45,439 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 14:04:16] 2025-10-12 14:03:45,702 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 14:04:16] 2025-10-12 14:03:45,826 | INFO     | [payload] failed_post thread has finished
[2025-10-12 14:04:16] 2025-10-12 14:03:45,944 | INFO     | [job] control thread has finished
[2025-10-12 14:04:16] 2025-10-12 14:03:45,950 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 14:04:16] 2025-10-12 14:03:45,978 | INFO     | [job] validate thread has finished
[2025-10-12 14:04:16] 2025-10-12 14:03:46,135 | INFO     | [payload] control thread has finished
[2025-10-12 14:04:16] 2025-10-12 14:03:46,954 | INFO     | [job] queue monitor thread has finished
[2025-10-12 14:04:16] 2025-10-12 14:03:46,970 | INFO     | [data] copytool_out thread has finished
[2025-10-12 14:04:16] 2025-10-12 14:03:48,054 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 14:04:16] 2025-10-12 14:04:10,766 | INFO     | [monitor] cgroup control has ended
[2025-10-12 14:04:16] 2025-10-12 14:04:10,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139778800498496)>', '<ExcThread(monitor, started 139778091640576)>']
[2025-10-12 14:04:16] 2025-10-12 14:04:13,226 | INFO     | PID=64411 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-12 14:04:16] 2025-10-12 14:04:13,226 | INFO     | .. there are 17 such processes running
[2025-10-12 14:04:16] 2025-10-12 14:04:13,228 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 14:04:16] 2025-10-12 14:04:13,228 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 14:04:16] 2025-10-12 14:04:13,228 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 14:04:16] 2025-10-12 14:04:13,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 14:04:16] 2025-10-12 14:04:13,228 | INFO     | [monitor] control thread has ended
[2025-10-12 14:04:16] 2025-10-12 14:04:15,941 | INFO     | all workflow threads have been joined
[2025-10-12 14:04:16] 2025-10-12 14:04:15,941 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 14:04:16] 2025-10-12 14:04:15,942 | INFO     | traces error code: 0
[2025-10-12 14:04:16] 2025-10-12 14:04:15,942 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 14:04:16] 2025-10-12 14:04:16,109 [wrapper] ==== pilot stdout END ====
[2025-10-12 14:04:16] 2025-10-12 14:04:16,113 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 14:04:16] 2025-10-12 14:04:16,117 [wrapper] pilotpid: 64411
[2025-10-12 14:04:16] 2025-10-12 14:04:16,121 [wrapper] Pilot exit status: 0
[2025-10-12 14:04:16] 2025-10-12 14:04:16,135 [wrapper] pandaids: 6839661093
[2025-10-12 14:04:16] 2025-10-12 14:04:16,317 [wrapper] cleanup supervisor_pilot  472558 64412
[2025-10-12 14:04:16] 2025-10-12 14:04:16,321 [wrapper] Test setup, not cleaning
[2025-10-12 14:04:16] 2025-10-12 14:04:16,325 [wrapper] apfmon messages muted
[2025-10-12 14:04:16] 2025-10-12 14:04:16,329 [wrapper] ==== wrapper stdout END ====
[2025-10-12 14:04:16] 2025-10-12 14:04:16,333 [wrapper] ==== wrapper stderr END ====
[2025-10-12 14:04:16]  *** Error codes and diagnostics ***
[2025-10-12 14:04:16]     "exeErrorCode": 0,
[2025-10-12 14:04:16]     "exeErrorDiag": "",
[2025-10-12 14:04:16]     "pilotErrorCode": 0,
[2025-10-12 14:04:16]     "pilotErrorDiag": "",
[2025-10-12 14:04:16]  *** Listing of results directory ***
[2025-10-12 14:04:16] total 407544
[2025-10-12 14:04:16] -rw-r--r-- 1 boinc boinc    563267 Oct  7 07:02 pilot3.tar.gz
[2025-10-12 14:04:16] -rwx------ 1 boinc boinc     36292 Oct 12 08:29 runpilot2-wrapper.sh
[2025-10-12 14:04:16] -rw-r--r-- 1 boinc boinc      5112 Oct 12 08:29 queuedata.json
[2025-10-12 14:04:16] -rw-r--r-- 1 boinc boinc       100 Oct 12 13:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 14:04:16] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 13:11 run_atlas
[2025-10-12 14:04:16] -rw-r--r-- 1 boinc boinc       105 Oct 12 13:11 job.xml
[2025-10-12 14:04:16] -rw-r--r-- 2 boinc boinc     15120 Oct 12 13:11 start_atlas.sh
[2025-10-12 14:04:16] drwxrwx--x 2 boinc boinc      4096 Oct 12 13:11 shared
[2025-10-12 14:04:16] -rw-r--r-- 2 boinc boinc    576706 Oct 12 13:11 input.tar.gz
[2025-10-12 14:04:16] -rw-r--r-- 1 boinc boinc      9396 Oct 12 13:11 init_data.xml
[2025-10-12 14:04:16] -rw-r--r-- 2 boinc boinc 219749484 Oct 12 13:11 EVNT.46676267._003532.pool.root.1
[2025-10-12 14:04:16] -rw-r--r-- 1 boinc boinc         0 Oct 12 13:11 boinc_setup_complete
[2025-10-12 14:04:16] -rw-r--r-- 1 boinc boinc         0 Oct 12 13:11 boinc_lockfile
[2025-10-12 14:04:16] -rw-r--r-- 1 boinc boinc      2550 Oct 12 13:11 pandaJob.out
[2025-10-12 14:04:16] -rw------- 1 boinc boinc    975512 Oct 12 13:12 agis_schedconf.cvmfs.json
[2025-10-12 14:04:16] -rw------- 1 boinc boinc   1560580 Oct 12 13:12 agis_ddmendpoints.agis.ALL.json
[2025-10-12 14:04:16] drwx------ 4 boinc boinc      4096 Oct 12 13:12 pilot3
[2025-10-12 14:04:16] -rw------- 1 boinc boinc 191998703 Oct 12 14:02 HITS.46676269._074231.pool.root.1
[2025-10-12 14:04:16] -rw-r--r-- 1 boinc boinc       529 Oct 12 14:03 boinc_task_state.xml
[2025-10-12 14:04:16] -rw------- 1 boinc boinc      1040 Oct 12 14:03 memory_monitor_summary.json
[2025-10-12 14:04:16] -rw------- 1 boinc boinc    370268 Oct 12 14:03 log.46676269._074231.job.log.tgz.1
[2025-10-12 14:04:16] -rw------- 1 boinc boinc      7745 Oct 12 14:03 heartbeat.json
[2025-10-12 14:04:16] -rw-r--r-- 1 boinc boinc      8192 Oct 12 14:04 boinc_mmap_file
[2025-10-12 14:04:16] -rw------- 1 boinc boinc        95 Oct 12 14:04 pilot_heartbeat.json
[2025-10-12 14:04:16] -rw-r--r-- 1 boinc boinc        27 Oct 12 14:04 wrapper_checkpoint.txt
[2025-10-12 14:04:16] -rw------- 1 boinc boinc      4825 Oct 12 14:04 pilotlog.txt
[2025-10-12 14:04:16] -rw------- 1 boinc boinc    457485 Oct 12 14:04 log.46676269._074231.job.log.1
[2025-10-12 14:04:16] -rw------- 1 boinc boinc       357 Oct 12 14:04 output.list
[2025-10-12 14:04:16] -rw-r--r-- 1 boinc boinc       620 Oct 12 14:04 runtime_log
[2025-10-12 14:04:16] -rw------- 1 boinc boinc    849920 Oct 12 14:04 result.tar.gz
[2025-10-12 14:04:16] -rw-r--r-- 1 boinc boinc      8672 Oct 12 14:04 runtime_log.err
[2025-10-12 14:04:16] -rw------- 1 boinc boinc       643 Oct 12 14:04 aMVNDmEd6R8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmO8iNDmbJBJ3n.diag
[2025-10-12 14:04:16] -rw-r--r-- 1 boinc boinc     21738 Oct 12 14:04 stderr.txt
[2025-10-12 14:04:16] HITS file was successfully produced:
[2025-10-12 14:04:16] -rw------- 1 boinc boinc 191998703 Oct 12 14:02 shared/HITS.pool.root.1
[2025-10-12 14:04:16]  *** Contents of shared directory: ***
[2025-10-12 14:04:16] total 403520
[2025-10-12 14:04:16] -rw-r--r-- 2 boinc boinc     15120 Oct 12 13:11 start_atlas.sh
[2025-10-12 14:04:16] -rw-r--r-- 2 boinc boinc    576706 Oct 12 13:11 input.tar.gz
[2025-10-12 14:04:16] -rw-r--r-- 2 boinc boinc 219749484 Oct 12 13:11 ATLAS.root_0
[2025-10-12 14:04:16] -rw------- 1 boinc boinc 191998703 Oct 12 14:02 HITS.pool.root.1
[2025-10-12 14:04:16] -rw------- 1 boinc boinc    849920 Oct 12 14:04 result.tar.gz
14:04:18 (59698): run_atlas exited; CPU time 32503.931515
14:04:18 (59698): called boinc_finish(0)

</stderr_txt>
]]>

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